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Volumn 17, Issue 1, 2015, Pages

Prognostic stromal gene signatures in breast cancer

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; TRANSCRIPTOME;

EID: 84928728243     PISSN: 14655411     EISSN: 1465542X     Source Type: Journal    
DOI: 10.1186/s13058-015-0530-2     Document Type: Article
Times cited : (68)

References (49)
  • 4
    • 34548863946 scopus 로고    scopus 로고
    • Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors
    • Herschkowitz JI, Simin K, Weigman VJ, Mikaelian I, Usary J, Hu Z, et al. Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors. Genome Biol. 2007;8:R76.
    • (2007) Genome Biol , vol.8 , pp. R76
    • Herschkowitz, J.I.1    Simin, K.2    Weigman, V.J.3    Mikaelian, I.4    Usary, J.5    Hu, Z.6
  • 5
    • 65449159747 scopus 로고    scopus 로고
    • A compact VEGF signature associated with distant metastases and poor outcomes
    • Hu Z, Fan C, Livasy C, He X, Oh DS, Ewend MG, et al. A compact VEGF signature associated with distant metastases and poor outcomes. BMC Med. 2009;7:9.
    • (2009) BMC Med , vol.7 , pp. 9
    • Hu, Z.1    Fan, C.2    Livasy, C.3    He, X.4    Oh, D.S.5    Ewend, M.G.6
  • 6
    • 78049308800 scopus 로고    scopus 로고
    • Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer
    • Prat A, Parker JS, Karginova O, Fan C, Livasy C, Herschkowitz JI, et al. Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer. Breast Cancer Res. 2010;12:R68.
    • (2010) Breast Cancer Res , vol.12 , pp. R68
    • Prat, A.1    Parker, J.S.2    Karginova, O.3    Fan, C.4    Livasy, C.5    Herschkowitz, J.I.6
  • 8
    • 84874615488 scopus 로고    scopus 로고
    • Breast fibroblasts modulate early dissemination, tumorigenesis, and metastasis through alteration of extracellular matrix characteristics
    • Dumont N, Liu B, Defilippis RA, Chang H, Rabban JT, Karnezis AN, et al. Breast fibroblasts modulate early dissemination, tumorigenesis, and metastasis through alteration of extracellular matrix characteristics. Neoplasia. 2013;15:249-62.
    • (2013) Neoplasia , vol.15 , pp. 249-262
    • Dumont, N.1    Liu, B.2    Defilippis, R.A.3    Chang, H.4    Rabban, J.T.5    Karnezis, A.N.6
  • 9
    • 0036990109 scopus 로고    scopus 로고
    • The organizing principle: microenvironmental influences in the normal and malignant breast
    • Bissell MJ, Radisky DC, Rizki A, Weaver VM, Petersen OW. The organizing principle: microenvironmental influences in the normal and malignant breast. Differentiation. 2002;70:537-46.
    • (2002) Differentiation , vol.70 , pp. 537-546
    • Bissell, M.J.1    Radisky, D.C.2    Rizki, A.3    Weaver, V.M.4    Petersen, O.W.5
  • 11
    • 67549125238 scopus 로고    scopus 로고
    • Gene expression profiling of the tumor microenvironment during breast cancer progression
    • Ma XJ, Dahiya S, Richardson E, Erlander M, Sgroi DC. Gene expression profiling of the tumor microenvironment during breast cancer progression. Breast Cancer Res. 2009;11:R7.
    • (2009) Breast Cancer Res , vol.11 , pp. R7
    • Ma, X.J.1    Dahiya, S.2    Richardson, E.3    Erlander, M.4    Sgroi, D.C.5
  • 13
    • 33745445353 scopus 로고    scopus 로고
    • The effect of the stromal component of breast tumours on prediction of clinical outcome using gene expression microarray analysis
    • Cleator SJ, Powles TJ, Dexter T, Fulford L, Mackay A, Smith IE, et al. The effect of the stromal component of breast tumours on prediction of clinical outcome using gene expression microarray analysis. Breast Cancer Res. 2006;8:R32.
    • (2006) Breast Cancer Res , vol.8 , pp. R32
    • Cleator, S.J.1    Powles, T.J.2    Dexter, T.3    Fulford, L.4    Mackay, A.5    Smith, I.E.6
  • 14
    • 58149334773 scopus 로고    scopus 로고
    • A stroma-related gene signature predicts resistance to neoadjuvant chemotherapy in breast cancer
    • Farmer P, Bonnefoi H, Anderle P, Cameron D, Wirapati P, Becette V, et al. A stroma-related gene signature predicts resistance to neoadjuvant chemotherapy in breast cancer. Nat Med. 2009;15:68-74.
    • (2009) Nat Med , vol.15 , pp. 68-74
    • Farmer, P.1    Bonnefoi, H.2    Anderle, P.3    Cameron, D.4    Wirapati, P.5    Becette, V.6
  • 17
    • 84939289674 scopus 로고    scopus 로고
    • Accessed date May 2, 2014.
    • The Cancer Genome Atlas Research Network. http://cancergenome.nih.gov/ . Accessed date May 2, 2014.
  • 18
    • 0037137519 scopus 로고    scopus 로고
    • A gene-expression signature as a predictor of survival in breast cancer
    • van de Vijver MJ, He YD, van't Veer LJ, Dai H, Hart AA, Voskuil DW, et al. A gene-expression signature as a predictor of survival in breast cancer. N Engl J Med. 2002;347:1999-2009.
    • (2002) N Engl J Med , vol.347 , pp. 1999-2009
    • Vijver, M.J.1    He, Y.D.2    Veer, L.J.3    Dai, H.4    Hart, A.A.5    Voskuil, D.W.6
  • 19
    • 13844310310 scopus 로고    scopus 로고
    • Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer
    • Wang Y, Klijn JG, Zhang Y, Sieuwerts AM, Look MP, Yang F, et al. Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer. Lancet. 2005;365:671-9.
    • (2005) Lancet , vol.365 , pp. 671-679
    • Wang, Y.1    Klijn, J.G.2    Zhang, Y.3    Sieuwerts, A.M.4    Look, M.P.5    Yang, F.6
  • 20
    • 34250652449 scopus 로고    scopus 로고
    • Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series
    • Desmedt C, Piette F, Loi S, Wang Y, Lallemand F, Haibe-Kains B, et al. Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series. Clin Cancer Res. 2007;13:3207-14.
    • (2007) Clin Cancer Res , vol.13 , pp. 3207-3214
    • Desmedt, C.1    Piette, F.2    Loi, S.3    Wang, Y.4    Lallemand, F.5    Haibe-Kains, B.6
  • 21
    • 79955391807 scopus 로고    scopus 로고
    • Microarray-based class discovery for molecular classification of breast cancer: analysis of interobserver agreement
    • Mackay A, Weigelt B, Grigoriadis A, Kreike B, Natrajan R, A'Hern R, et al. Microarray-based class discovery for molecular classification of breast cancer: analysis of interobserver agreement. J Natl Cancer Inst 2011; 103:662-673.
    • (2011) J Natl Cancer Inst , vol.103 , pp. 662-673
    • Mackay, A.1    Weigelt, B.2    Grigoriadis, A.3    Kreike, B.4    Natrajan, R.5    A'Hern, R.6
  • 22
    • 84939289675 scopus 로고    scopus 로고
    • Accessed date June 5, 2014.
    • The Computational Cancer Biology. http://ccb.nki.nl/data/ . Accessed date June 5, 2014.
  • 24
    • 57049178485 scopus 로고    scopus 로고
    • Stabilization of RNA during laser capture microdissection by performing experiments under argon atmosphere or using ethanol as a solvent in staining solutions
    • Clement-Ziza M, Munnich A, Lyonnet S, Jaubert F, Besmond C. Stabilization of RNA during laser capture microdissection by performing experiments under argon atmosphere or using ethanol as a solvent in staining solutions. RNA. 2008;14:2698-704.
    • (2008) RNA , vol.14 , pp. 2698-2704
    • Clement-Ziza, M.1    Munnich, A.2    Lyonnet, S.3    Jaubert, F.4    Besmond, C.5
  • 25
    • 84887444879 scopus 로고    scopus 로고
    • Microenvironmental regulation of tumor progression and metastasis
    • Quail DF, Joyce JA. Microenvironmental regulation of tumor progression and metastasis. Nat Med. 2013;19:1423-37.
    • (2013) Nat Med , vol.19 , pp. 1423-1437
    • Quail, D.F.1    Joyce, J.A.2
  • 27
    • 79951818662 scopus 로고    scopus 로고
    • Gene expression profiles from formalin fixed paraffin embedded breast cancer tissue are largely comparable to fresh frozen matched tissue
    • Mittempergher L, de Ronde JJ, Nieuwland M, Kerkhoven RM, Simon I, Rutgers EJ, et al. Gene expression profiles from formalin fixed paraffin embedded breast cancer tissue are largely comparable to fresh frozen matched tissue. PLoS One. 2011;6:e17163.
    • (2011) PLoS One , vol.6 , pp. e17163
    • Mittempergher, L.1    Ronde, J.J.2    Nieuwland, M.3    Kerkhoven, R.M.4    Simon, I.5    Rutgers, E.J.6
  • 28
    • 84896386927 scopus 로고    scopus 로고
    • An optimized workflow for improved gene expression profiling for formalin-fixed, paraffin-embedded tumor samples
    • Thomas M, Poignee-Heger M, Weisser M, Wessner S, Belousov A. An optimized workflow for improved gene expression profiling for formalin-fixed, paraffin-embedded tumor samples. J Clin Bioinforma. 2013;3:10.
    • (2013) J Clin Bioinforma , vol.3 , pp. 10
    • Thomas, M.1    Poignee-Heger, M.2    Weisser, M.3    Wessner, S.4    Belousov, A.5
  • 30
    • 84899939441 scopus 로고    scopus 로고
    • 72-gene classifier for predicting prognosis of estrogen receptor-positive and node-negative breast cancer patients using formalin-fixed, paraffin-embedded tumor tissues
    • Nishio M, Naoi Y, Tsunashima R, Nakauchi C, Kagara N, Shimoda M, et al. 72-gene classifier for predicting prognosis of estrogen receptor-positive and node-negative breast cancer patients using formalin-fixed, paraffin-embedded tumor tissues. Clin Breast Cancer. 2013;14:e73-80.
    • (2013) Clin Breast Cancer , vol.14 , pp. e73-80
    • Nishio, M.1    Naoi, Y.2    Tsunashima, R.3    Nakauchi, C.4    Kagara, N.5    Shimoda, M.6
  • 31
    • 77955491622 scopus 로고    scopus 로고
    • Gene expression profiling of formalin-fixed, paraffin-embedded familial breast tumours using the whole genome-DASL assay
    • Waddell N, Cocciardi S, Johnson J, Healey S, Marsh A, Riley J, et al. Gene expression profiling of formalin-fixed, paraffin-embedded familial breast tumours using the whole genome-DASL assay. J Pathol. 2010;221:452-61.
    • (2010) J Pathol , vol.221 , pp. 452-461
    • Waddell, N.1    Cocciardi, S.2    Johnson, J.3    Healey, S.4    Marsh, A.5    Riley, J.6
  • 32
    • 79953776636 scopus 로고    scopus 로고
    • Genome-wide gene expression profiling of formalin-fixed paraffin-embedded breast cancer core biopsies using microarrays
    • Budczies J, Weichert W, Noske A, Muller BM, Weller C, Wittenberger T, et al. Genome-wide gene expression profiling of formalin-fixed paraffin-embedded breast cancer core biopsies using microarrays. J Histochem Cytochem. 2011;59:146-57.
    • (2011) J Histochem Cytochem , vol.59 , pp. 146-157
    • Budczies, J.1    Weichert, W.2    Noske, A.3    Muller, B.M.4    Weller, C.5    Wittenberger, T.6
  • 36
    • 84881549640 scopus 로고    scopus 로고
    • A core human primary tumor angiogenesis signature identifies the endothelial orphan receptor ELTD1 as a key regulator of angiogenesis
    • Masiero M, Simoes FC, Han HD, Snell C, Peterkin T, Bridges E, et al. A core human primary tumor angiogenesis signature identifies the endothelial orphan receptor ELTD1 as a key regulator of angiogenesis. Cancer Cell. 2013;24:229-41.
    • (2013) Cancer Cell , vol.24 , pp. 229-241
    • Masiero, M.1    Simoes, F.C.2    Han, H.D.3    Snell, C.4    Peterkin, T.5    Bridges, E.6
  • 37
    • 72849125358 scopus 로고    scopus 로고
    • Targeting fibroblast activation protein inhibits tumor stromagenesis and growth in mice
    • Santos AM, Jung J, Aziz N, Kissil JL, Pure E. Targeting fibroblast activation protein inhibits tumor stromagenesis and growth in mice. J Clin Invest. 2009;119:3613-25.
    • (2009) J Clin Invest , vol.119 , pp. 3613-3625
    • Santos, A.M.1    Jung, J.2    Aziz, N.3    Kissil, J.L.4    Pure, E.5
  • 38
    • 84885577414 scopus 로고    scopus 로고
    • Fibroblast activation protein expression by stromal cells and tumor-associated macrophages in human breast cancer
    • Tchou J, Zhang PJ, Bi Y, Satija C, Marjumdar R, Stephen TL, et al. Fibroblast activation protein expression by stromal cells and tumor-associated macrophages in human breast cancer. Hum Pathol. 2013;44:2549-57.
    • (2013) Hum Pathol , vol.44 , pp. 2549-2557
    • Tchou, J.1    Zhang, P.J.2    Bi, Y.3    Satija, C.4    Marjumdar, R.5    Stephen, T.L.6
  • 39
    • 0035915797 scopus 로고    scopus 로고
    • Stromal expression of fibroblast activation protein/seprase, a cell membrane serine proteinase and gelatinase, is associated with longer survival in patients with invasive ductal carcinoma of breast
    • Ariga N, Sato E, Ohuchi N, Nagura H, Ohtani H. Stromal expression of fibroblast activation protein/seprase, a cell membrane serine proteinase and gelatinase, is associated with longer survival in patients with invasive ductal carcinoma of breast. Int J Cancer. 2001;95:67-72.
    • (2001) Int J Cancer , vol.95 , pp. 67-72
    • Ariga, N.1    Sato, E.2    Ohuchi, N.3    Nagura, H.4    Ohtani, H.5
  • 40
    • 78149298209 scopus 로고    scopus 로고
    • Suppression of antitumor immunity by stromal cells expressing fibroblast activation protein-alpha
    • Kraman M, Bambrough PJ, Arnold JN, Roberts EW, Magiera L, Jones JO, et al. Suppression of antitumor immunity by stromal cells expressing fibroblast activation protein-alpha. Science. 2010;330:827-30.
    • (2010) Science , vol.330 , pp. 827-830
    • Kraman, M.1    Bambrough, P.J.2    Arnold, J.N.3    Roberts, E.W.4    Magiera, L.5    Jones, J.O.6
  • 42
    • 84865417273 scopus 로고    scopus 로고
    • The C1q family of proteins: insights into the emerging non-traditional functions
    • Ghebrehiwet B, Hosszu KK, Valentino A, Peerschke EI. The C1q family of proteins: insights into the emerging non-traditional functions. Front Immunol. 2012;3:52.
    • (2012) Front Immunol , vol.3 , pp. 52
    • Ghebrehiwet, B.1    Hosszu, K.K.2    Valentino, A.3    Peerschke, E.I.4
  • 44
    • 19644376395 scopus 로고    scopus 로고
    • Tachyplesin activates the classic complement pathway to kill tumor cells
    • Chen J, Xu XM, Underhill CB, Yang S, Wang L, Chen Y, et al. Tachyplesin activates the classic complement pathway to kill tumor cells. Cancer Res. 2005;65:4614-22.
    • (2005) Cancer Res , vol.65 , pp. 4614-4622
    • Chen, J.1    Xu, X.M.2    Underhill, C.B.3    Yang, S.4    Wang, L.5    Chen, Y.6
  • 45
    • 66849124849 scopus 로고    scopus 로고
    • Complement C1q activates tumor suppressor WWOX to induce apoptosis in prostate cancer cells
    • Hong Q, Sze CI, Lin SR, Lee MH, He RY, Schultz L, et al. Complement C1q activates tumor suppressor WWOX to induce apoptosis in prostate cancer cells. PLoS One. 2009;4:e5755.
    • (2009) PLoS One , vol.4 , pp. e5755
    • Hong, Q.1    Sze, C.I.2    Lin, S.R.3    Lee, M.H.4    He, R.Y.5    Schultz, L.6
  • 47
    • 2342581415 scopus 로고    scopus 로고
    • Maturation of dendritic cells abrogates C1q production in vivo and in vitro
    • Castellano G, Woltman AM, Nauta AJ, Roos A, Trouw LA, Seelen MA, et al. Maturation of dendritic cells abrogates C1q production in vivo and in vitro. Blood. 2004;103:3813-20.
    • (2004) Blood , vol.103 , pp. 3813-3820
    • Castellano, G.1    Woltman, A.M.2    Nauta, A.J.3    Roos, A.4    Trouw, L.A.5    Seelen, M.A.6
  • 48
    • 84883690275 scopus 로고    scopus 로고
    • Tumor-altered dendritic cell function: implications for anti-tumor immunity
    • Hargadon KM. Tumor-altered dendritic cell function: implications for anti-tumor immunity. Front Immunol. 2013;4:192.
    • (2013) Front Immunol , vol.4 , pp. 192
    • Hargadon, K.M.1
  • 49
    • 84879661529 scopus 로고    scopus 로고
    • CD4(+) follicular helper T cell infiltration predicts breast cancer survival
    • Gu-Trantien C, Loi S, Garaud S, Equeter C, Libin M, de Wind A, et al. CD4(+) follicular helper T cell infiltration predicts breast cancer survival. J Clin Invest. 2013;123:2873-92.
    • (2013) J Clin Invest , vol.123 , pp. 2873-2892
    • Gu-Trantien, C.1    Loi, S.2    Garaud, S.3    Equeter, C.4    Libin, M.5    Wind, A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.