-
1
-
-
33846610579
-
Gene expression profiling and clinical outcome in breast cancer
-
10.1089/omi.2006.10.429, 17233555
-
Bertucci F, Finetti P, Cervera N, Maraninchi D, Viens P, Birnbaum D. Gene expression profiling and clinical outcome in breast cancer. Omics 2006, 10:429-443. 10.1089/omi.2006.10.429, 17233555.
-
(2006)
Omics
, vol.10
, pp. 429-443
-
-
Bertucci, F.1
Finetti, P.2
Cervera, N.3
Maraninchi, D.4
Viens, P.5
Birnbaum, D.6
-
2
-
-
0037478605
-
Repeated observation of breast tumor subtypes in independent gene expression data sets
-
10.1073/pnas.0932692100, 166244, 12829800
-
Sorlie T, Tibshirani R, Parker J, Hastie T, Marron JS, Nobel A, Deng S, Johnsen H, Pesich R, Geisler S, Demeter J, Perou CM, Lønning PE, Brown PO, Børresen-Dale AL, Botstein D. Repeated observation of breast tumor subtypes in independent gene expression data sets. Proc Natl Acad Sci USA 2003, 100:8418-8423. 10.1073/pnas.0932692100, 166244, 12829800.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 8418-8423
-
-
Sorlie, T.1
Tibshirani, R.2
Parker, J.3
Hastie, T.4
Marron, J.S.5
Nobel, A.6
Deng, S.7
Johnsen, H.8
Pesich, R.9
Geisler, S.10
Demeter, J.11
Perou, C.M.12
Lønning, P.E.13
Brown, P.O.14
Børresen-Dale, A.L.15
Botstein, D.16
-
3
-
-
33745834662
-
Distinct molecular mechanisms underlying clinically relevant subtypes of breast cancer: gene expression analyses across three different platforms
-
10.1186/1471-2164-7-127, 1489944, 16729877
-
Sørlie T, Wang Y, Xiao C, Johnsen H, Naume B, Samaha RR, Børresen-Dale AL. Distinct molecular mechanisms underlying clinically relevant subtypes of breast cancer: gene expression analyses across three different platforms. BMC Genomics 2006, 7:127. 10.1186/1471-2164-7-127, 1489944, 16729877.
-
(2006)
BMC Genomics
, vol.7
, pp. 127
-
-
Sørlie, T.1
Wang, Y.2
Xiao, C.3
Johnsen, H.4
Naume, B.5
Samaha, R.R.6
Børresen-Dale, A.L.7
-
4
-
-
0034680102
-
Molecular portraits of human breast tumours
-
10.1038/35021093, 10963602
-
Perou CM, Sørlie T, Eisen MB, van de Rijn M, Jeffrey SS, Rees CA, Pollack JR, Ross DT, Johnsen H, Akslen LA, Fluge O, Pergamenschikov A, Williams C, Zhu SX, Lønning PE, Børresen-Dale AL, Brown PO, Botstein D. Molecular portraits of human breast tumours. Nature 2000, 406:747-752. 10.1038/35021093, 10963602.
-
(2000)
Nature
, vol.406
, pp. 747-752
-
-
Perou, C.M.1
Sørlie, T.2
Eisen, M.B.3
van de Rijn, M.4
Jeffrey, S.S.5
Rees, C.A.6
Pollack, J.R.7
Ross, D.T.8
Johnsen, H.9
Akslen, L.A.10
Fluge, O.11
Pergamenschikov, A.12
Williams, C.13
Zhu, S.X.14
Lønning, P.E.15
Børresen-Dale, A.L.16
Brown, P.O.17
Botstein, D.18
-
5
-
-
18244409687
-
Gene expression profiling predicts clinical outcome of breast cancer
-
10.1038/415530a, 11823860
-
van 't Veer LJ, Dai H, van de Vijver MJ, He YD, Hart AA, Mao M, Peterse HL, van der Kooy K, Marton MJ, Witteveen AT, Schreiber GJ, Kerkhoven RM, Roberts C, Linsley PS, Bernards R, Friend SH. Gene expression profiling predicts clinical outcome of breast cancer. Nature 2002, 415:530-536. 10.1038/415530a, 11823860.
-
(2002)
Nature
, vol.415
, pp. 530-536
-
-
van 't Veer, L.J.1
Dai, H.2
van de Vijver, M.J.3
He, Y.D.4
Hart, A.A.5
Mao, M.6
Peterse, H.L.7
van der Kooy, K.8
Marton, M.J.9
Witteveen, A.T.10
Schreiber, G.J.11
Kerkhoven, R.M.12
Roberts, C.13
Linsley, P.S.14
Bernards, R.15
Friend, S.H.16
-
6
-
-
43949095489
-
How basal are triple-negative breast cancers?
-
10.1002/ijc.23518, 18398844
-
Bertucci F, Finetti P, Cervera N, Esterni B, Hermitte F, Viens P, Birnbaum D. How basal are triple-negative breast cancers?. Int J Cancer 2008, 123:236-240. 10.1002/ijc.23518, 18398844.
-
(2008)
Int J Cancer
, vol.123
, pp. 236-240
-
-
Bertucci, F.1
Finetti, P.2
Cervera, N.3
Esterni, B.4
Hermitte, F.5
Viens, P.6
Birnbaum, D.7
-
7
-
-
0037137519
-
A gene-expression signature as a predictor of survival in breast cancer
-
10.1056/NEJMoa021967, 12490681
-
van de Vijver MJ, He YD, van't Veer LJ, Dai H, Hart AA, Voskuil DW, Schreiber GJ, Peterse JL, Roberts C, Marton MJ, Parrish M, Atsma D, Witteveen A, Glas A, Delahaye L, van der Velde T, Bartelink H, Rodenhuis S, Rutgers ET, Friend SH, Bernards R. A gene-expression signature as a predictor of survival in breast cancer. N Engl J Med 2002, 347:1999-2009. 10.1056/NEJMoa021967, 12490681.
-
(2002)
N Engl J Med
, vol.347
, pp. 1999-2009
-
-
van de Vijver, M.J.1
He, Y.D.2
van't Veer, L.J.3
Dai, H.4
Hart, A.A.5
Voskuil, D.W.6
Schreiber, G.J.7
Peterse, J.L.8
Roberts, C.9
Marton, M.J.10
Parrish, M.11
Atsma, D.12
Witteveen, A.13
Glas, A.14
Delahaye, L.15
van der Velde, T.16
Bartelink, H.17
Rodenhuis, S.18
Rutgers, E.T.19
Friend, S.H.20
Bernards, R.21
more..
-
8
-
-
51349088017
-
Biological processes associated with breast cancer clinical outcome depend on the molecular subtypes
-
10.1158/1078-0432.CCR-07-4756, 18698033
-
Desmedt C, Haibe-Kains B, Wirapati P, Buyse M, Larsimont D, Bontempi G, Delorenzi M, Piccart M, Sotiriou C. Biological processes associated with breast cancer clinical outcome depend on the molecular subtypes. Clin Cancer Res 2008, 14:5158-5165. 10.1158/1078-0432.CCR-07-4756, 18698033.
-
(2008)
Clin Cancer Res
, vol.14
, pp. 5158-5165
-
-
Desmedt, C.1
Haibe-Kains, B.2
Wirapati, P.3
Buyse, M.4
Larsimont, D.5
Bontempi, G.6
Delorenzi, M.7
Piccart, M.8
Sotiriou, C.9
-
9
-
-
0037032835
-
The protein kinase complement of the human genome
-
10.1126/science.1075762, 12471243
-
Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S. The protein kinase complement of the human genome. Science 2002, 298:1912-1934. 10.1126/science.1075762, 12471243.
-
(2002)
Science
, vol.298
, pp. 1912-1934
-
-
Manning, G.1
Whyte, D.B.2
Martinez, R.3
Hunter, T.4
Sudarsanam, S.5
-
10
-
-
1542515338
-
A census of human cancer genes
-
10.1038/nrc1299, 2665285, 14993899
-
Futreal PA, Coin L, Marshall M, Down T, Hubbard T, Wooster R, Rahman N, Stratton MR. A census of human cancer genes. Nat Rev Cancer 2004, 4:177-83. 10.1038/nrc1299, 2665285, 14993899.
-
(2004)
Nat Rev Cancer
, vol.4
, pp. 177-183
-
-
Futreal, P.A.1
Coin, L.2
Marshall, M.3
Down, T.4
Hubbard, T.5
Wooster, R.6
Rahman, N.7
Stratton, M.R.8
-
11
-
-
22044442973
-
Tyrosine kinases as targets for cancer therapy
-
10.1056/NEJMra044389, 16014887
-
Krause DS, Van Etten RA. Tyrosine kinases as targets for cancer therapy. N Engl J Med 2005, 353:172-187. 10.1056/NEJMra044389, 16014887.
-
(2005)
N Engl J Med
, vol.353
, pp. 172-187
-
-
Krause, D.S.1
Van Etten, R.A.2
-
12
-
-
38849136014
-
Sixteen-kinase gene expression identifies luminal breast cancers with poor prognosis
-
10.1158/0008-5472.CAN-07-5516, 18245477
-
Finetti P, Cervera N, Charafe-Jauffret E, Chabannon C, Charpin C, Chaffanet M, Jacquemier J, Viens P, Birnbaum D, Bertucci F. Sixteen-kinase gene expression identifies luminal breast cancers with poor prognosis. Cancer Res 2008, 68:767-776. 10.1158/0008-5472.CAN-07-5516, 18245477.
-
(2008)
Cancer Res
, vol.68
, pp. 767-776
-
-
Finetti, P.1
Cervera, N.2
Charafe-Jauffret, E.3
Chabannon, C.4
Charpin, C.5
Chaffanet, M.6
Jacquemier, J.7
Viens, P.8
Birnbaum, D.9
Bertucci, F.10
-
13
-
-
70350235064
-
Identification of novel kinase targets for the treatment of estrogen receptor-negative breast cancer
-
10.1158/1078-0432.CCR-09-1107, 2763053, 19808870
-
Speers C, Tsimelzon A, Sexton K, Herrick AM, Gutierrez C, Culhane A, Quackenbush J, Hilsenbeck S, Chang J, Brown P. Identification of novel kinase targets for the treatment of estrogen receptor-negative breast cancer. Clin Cancer Res 2009, 15:6327-6340. 10.1158/1078-0432.CCR-09-1107, 2763053, 19808870.
-
(2009)
Clin Cancer Res
, vol.15
, pp. 6327-6340
-
-
Speers, C.1
Tsimelzon, A.2
Sexton, K.3
Herrick, A.M.4
Gutierrez, C.5
Culhane, A.6
Quackenbush, J.7
Hilsenbeck, S.8
Chang, J.9
Brown, P.10
-
14
-
-
44849101184
-
The humoral immune system has a key prognostic impact in node-negative breast cancer
-
10.1158/0008-5472.CAN-07-5206, 18593943
-
Schmidt M, Böhm D, von Törne C, Steiner E, Puhl A, Pilch H, Lehr HA, Hengstler JG, Kölbl H, Gehrmann M. The humoral immune system has a key prognostic impact in node-negative breast cancer. Cancer Res 2008, 68:5405-5413. 10.1158/0008-5472.CAN-07-5206, 18593943.
-
(2008)
Cancer Res
, vol.68
, pp. 5405-5413
-
-
Schmidt, M.1
Böhm, D.2
von Törne, C.3
Steiner, E.4
Puhl, A.5
Pilch, H.6
Lehr, H.A.7
Hengstler, J.G.8
Kölbl, H.9
Gehrmann, M.10
-
15
-
-
13844310310
-
Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer
-
Wang Y, Klijn JG, Zhang Y, Sieuwerts AM, Look MP, Yang F, Talantov D, Timmermans M, Meijer-van Gelder ME, Yu J, Jatkoe T, Berns EM, Atkins D, Foekens JA. Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer. Lancet 2005, 365:671-679.
-
(2005)
Lancet
, vol.365
, pp. 671-679
-
-
Wang, Y.1
Klijn, J.G.2
Zhang, Y.3
Sieuwerts, A.M.4
Look, M.P.5
Yang, F.6
Talantov, D.7
Timmermans, M.8
Meijer-van Gelder, M.E.9
Yu, J.10
Jatkoe, T.11
Berns, E.M.12
Atkins, D.13
Foekens, J.A.14
-
16
-
-
33144462268
-
Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis
-
10.1093/jnci/djj052, 16478745
-
Sotiriou C, Wirapati P, Loi S, Harris A, Fox S, Smeds J, Nordgren H, Farmer P, Praz V, Haibe-Kains B, Desmedt C, Larsimont D, Cardoso F, Peterse H, Nuyten D, Buyse M, Van de Vijver MJ, Bergh J, Piccart M, Delorenzi M. Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis. J Natl Cancer Inst 2006, 98:262-272. 10.1093/jnci/djj052, 16478745.
-
(2006)
J Natl Cancer Inst
, vol.98
, pp. 262-272
-
-
Sotiriou, C.1
Wirapati, P.2
Loi, S.3
Harris, A.4
Fox, S.5
Smeds, J.6
Nordgren, H.7
Farmer, P.8
Praz, V.9
Haibe-Kains, B.10
Desmedt, C.11
Larsimont, D.12
Cardoso, F.13
Peterse, H.14
Nuyten, D.15
Buyse, M.16
Van de Vijver, M.J.17
Bergh, J.18
Piccart, M.19
Delorenzi, M.20
more..
-
17
-
-
78650856691
-
University of North Carolina Microarray Database
-
University of North Carolina Microarray Database. , https://genome.unc.edu/
-
-
-
-
18
-
-
33751261643
-
Genetic reclassification of histologic grade delineates new clinical subtypes of breast cancer
-
10.1158/0008-5472.CAN-05-4414, 17079448
-
Ivshina AV, George J, Senko O, Mow B, Putti TC, Smeds J, Lindahl T, Pawitan Y, Hall P, Nordgren H, Wong JE, Liu ET, Bergh J, Kuznetsov VA, Miller LD. Genetic reclassification of histologic grade delineates new clinical subtypes of breast cancer. Cancer Res 2006, 66:10292-10301. 10.1158/0008-5472.CAN-05-4414, 17079448.
-
(2006)
Cancer Res
, vol.66
, pp. 10292-10301
-
-
Ivshina, A.V.1
George, J.2
Senko, O.3
Mow, B.4
Putti, T.C.5
Smeds, J.6
Lindahl, T.7
Pawitan, Y.8
Hall, P.9
Nordgren, H.10
Wong, J.E.11
Liu, E.T.12
Bergh, J.13
Kuznetsov, V.A.14
Miller, L.D.15
-
19
-
-
34250652449
-
Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series
-
10.1158/1078-0432.CCR-06-2765, 17545524, TRANSBIG Consortium
-
Desmedt C, Piette F, Loi S, Wang Y, Lallemand F, Haibe-Kains B, Viale G, Delorenzi M, Zhang Y, d'Assignies MS, Bergh J, Lidereau R, Ellis P, Harris AL, Klijn JG, Foekens JA, Cardoso F, Piccart MJ, Buyse M, Sotiriou C, . TRANSBIG Consortium Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series. Clin Cancer Res 2007, 13:3207-3214. 10.1158/1078-0432.CCR-06-2765, 17545524, TRANSBIG Consortium.
-
(2007)
Clin Cancer Res
, vol.13
, pp. 3207-3214
-
-
Desmedt, C.1
Piette, F.2
Loi, S.3
Wang, Y.4
Lallemand, F.5
Haibe-Kains, B.6
Viale, G.7
Delorenzi, M.8
Zhang, Y.9
d'Assignies, M.S.10
Bergh, J.11
Lidereau, R.12
Ellis, P.13
Harris, A.L.14
Klijn, J.G.15
Foekens, J.A.16
Cardoso, F.17
Piccart, M.J.18
Buyse, M.19
Sotiriou, C.20
more..
-
20
-
-
34447632167
-
Gene expression profiling spares early breast cancer patients from adjuvant therapy: derived and validated in two population-based cohorts
-
10.1186/bcr1325, 1410752, 16280042
-
Pawitan Y, Bjöhle J, Amler L, Borg AL, Egyhazi S, Hall P, Han X, Holmberg L, Huang F, Klaar S, Liu ET, Miller L, Nordgren H, Ploner A, Sandelin K, Shaw PM, Smeds J, Skoog L, Wedrén S, Bergh J. Gene expression profiling spares early breast cancer patients from adjuvant therapy: derived and validated in two population-based cohorts. Breast Cancer Res 2005, 7:R953-964. 10.1186/bcr1325, 1410752, 16280042.
-
(2005)
Breast Cancer Res
, vol.7
-
-
Pawitan, Y.1
Bjöhle, J.2
Amler, L.3
Borg, A.L.4
Egyhazi, S.5
Hall, P.6
Han, X.7
Holmberg, L.8
Huang, F.9
Klaar, S.10
Liu, E.T.11
Miller, L.12
Nordgren, H.13
Ploner, A.14
Sandelin, K.15
Shaw, P.M.16
Smeds, J.17
Skoog, L.18
Wedrén, S.19
Bergh, J.20
more..
-
21
-
-
26444546442
-
An expression signature for p53 status in human breast cancer predicts mutation status, transcriptional effects, and patient survival
-
10.1073/pnas.0506230102, 1197273, 16141321
-
Miller LD, Smeds J, George J, Vega VB, Vergara L, Ploner A, Pawitan Y, Hall P, Klaar S, Liu ET, Bergh J. An expression signature for p53 status in human breast cancer predicts mutation status, transcriptional effects, and patient survival. Proc Natl Acad Sci USA 2005, 102:13550-13555. 10.1073/pnas.0506230102, 1197273, 16141321.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 13550-13555
-
-
Miller, L.D.1
Smeds, J.2
George, J.3
Vega, V.B.4
Vergara, L.5
Ploner, A.6
Pawitan, Y.7
Hall, P.8
Klaar, S.9
Liu, E.T.10
Bergh, J.11
-
22
-
-
33749030177
-
Pharmacogenomic predictor of sensitivity to preoperative chemotherapy with paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide in breast cancer
-
10.1200/JCO.2006.05.6861, 16896004
-
Hess KR, Anderson K, Symmans WF, Valero V, Ibrahim N, Mejia JA, Booser D, Theriault RL, Buzdar AU, Dempsey PJ, Rouzier R, Sneige N, Ross JS, Vidaurre T, Gómez HL, Hortobagyi GN, Pusztai L. Pharmacogenomic predictor of sensitivity to preoperative chemotherapy with paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide in breast cancer. J Clin Oncol 2006, 24:4236-4244. 10.1200/JCO.2006.05.6861, 16896004.
-
(2006)
J Clin Oncol
, vol.24
, pp. 4236-4244
-
-
Hess, K.R.1
Anderson, K.2
Symmans, W.F.3
Valero, V.4
Ibrahim, N.5
Mejia, J.A.6
Booser, D.7
Theriault, R.L.8
Buzdar, A.U.9
Dempsey, P.J.10
Rouzier, R.11
Sneige, N.12
Ross, J.S.13
Vidaurre, T.14
Gómez, H.L.15
Hortobagyi, G.N.16
Pusztai, L.17
-
23
-
-
36549068221
-
Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial
-
10.1016/S1470-2045(07)70345-5, 18024211
-
Bonnefoi H, Potti A, Delorenzi M, Mauriac L, Campone M, Tubiana-Hulin M, Petit T, Rouanet P, Jassem J, Blot E, Becette V, Farmer P, André S, Acharya CR, Mukherjee S, Cameron D, Bergh J, Nevins JR, Iggo RD. Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial. Lancet Oncol 2007, 8:1071-1078. 10.1016/S1470-2045(07)70345-5, 18024211.
-
(2007)
Lancet Oncol
, vol.8
, pp. 1071-1078
-
-
Bonnefoi, H.1
Potti, A.2
Delorenzi, M.3
Mauriac, L.4
Campone, M.5
Tubiana-Hulin, M.6
Petit, T.7
Rouanet, P.8
Jassem, J.9
Blot, E.10
Becette, V.11
Farmer, P.12
André, S.13
Acharya, C.R.14
Mukherjee, S.15
Cameron, D.16
Bergh, J.17
Nevins, J.R.18
Iggo, R.D.19
-
24
-
-
0027218571
-
FGFRI and PLAT genes and DNA amplification at 8p12 in breast and ovarian cancers
-
10.1002/gcc.2870070407, 7692948
-
Theillet C, Adelaide J, Louason G, Bonnet-Dorion F, Jacquemier J, Adnane J, Longy M, Katsaros D, Sismondi P, Gaudray P. FGFRI and PLAT genes and DNA amplification at 8p12 in breast and ovarian cancers. Genes Chromosomes Cancer 1993, 7:219-226. 10.1002/gcc.2870070407, 7692948.
-
(1993)
Genes Chromosomes Cancer
, vol.7
, pp. 219-226
-
-
Theillet, C.1
Adelaide, J.2
Louason, G.3
Bonnet-Dorion, F.4
Jacquemier, J.5
Adnane, J.6
Longy, M.7
Katsaros, D.8
Sismondi, P.9
Gaudray, P.10
-
25
-
-
0142121516
-
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
-
10.1093/biostatistics/4.2.249, 12925520
-
Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 2003, 4:249-264. 10.1093/biostatistics/4.2.249, 12925520.
-
(2003)
Biostatistics
, vol.4
, pp. 249-264
-
-
Irizarry, R.A.1
Hobbs, B.2
Collin, F.3
Beazer-Barclay, Y.D.4
Antonellis, K.J.5
Scherf, U.6
Speed, T.P.7
-
26
-
-
33646874546
-
The molecular portraits of breast tumors are conserved across microarray platforms
-
10.1186/1471-2164-7-96, 1468408, 16643655
-
Hu Z, Fan C, Oh DS, Marron JS, He X, Qaqish BF, Livasy C, Carey LA, Reynolds E, Dressler L, Nobel A, Parker J, Ewend MG, Sawyer LR, Wu J, Liu Y, Nanda R, Tretiakova M, Ruiz Orrico A, Dreher D, Palazzo JP, Perreard L, Nelson E, Mone M, Hansen H, Mullins M, Quackenbush JF, Ellis MJ, Olopade OI, Bernard PS, Perou CM. The molecular portraits of breast tumors are conserved across microarray platforms. BMC Genomics 2006, 7:96. 10.1186/1471-2164-7-96, 1468408, 16643655.
-
(2006)
BMC Genomics
, vol.7
, pp. 96
-
-
Hu, Z.1
Fan, C.2
Oh, D.S.3
Marron, J.S.4
He, X.5
Qaqish, B.F.6
Livasy, C.7
Carey, L.A.8
Reynolds, E.9
Dressler, L.10
Nobel, A.11
Parker, J.12
Ewend, M.G.13
Sawyer, L.R.14
Wu, J.15
Liu, Y.16
Nanda, R.17
Tretiakova, M.18
Ruiz Orrico, A.19
Dreher, D.20
Palazzo, J.P.21
Perreard, L.22
Nelson, E.23
Mone, M.24
Hansen, H.25
Mullins, M.26
Quackenbush, J.F.27
Ellis, M.J.28
Olopade, O.I.29
Bernard, P.S.30
Perou, C.M.31
more..
-
27
-
-
0037142053
-
The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma
-
10.1056/NEJMoa012914, 12075054
-
Rosenwald A, Wright G, Chan WC, Connors JM, Campo E, Fisher RI, Gascoyne RD, Muller-Hermelink HK, Smeland EB, Giltnane JM, Hurt EM, Zhao H, Averett L, Yang L, Wilson WH, Jaffe ES, Simon R, Klausner RD, Powell J, Duffey PL, Longo DL, Greiner TC, Weisenburger DD, Sanger WG, Dave BJ, Lynch JC, Vose J, Armitage JO, Montserrat E, López-Guillermo A, et al. The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma. N Engl J Med 2002, 346:1937-1947. 10.1056/NEJMoa012914, 12075054.
-
(2002)
N Engl J Med
, vol.346
, pp. 1937-1947
-
-
Rosenwald, A.1
Wright, G.2
Chan, W.C.3
Connors, J.M.4
Campo, E.5
Fisher, R.I.6
Gascoyne, R.D.7
Muller-Hermelink, H.K.8
Smeland, E.B.9
Giltnane, J.M.10
Hurt, E.M.11
Zhao, H.12
Averett, L.13
Yang, L.14
Wilson, W.H.15
Jaffe, E.S.16
Simon, R.17
Klausner, R.D.18
Powell, J.19
Duffey, P.L.20
Longo, D.L.21
Greiner, T.C.22
Weisenburger, D.D.23
Sanger, W.G.24
Dave, B.J.25
Lynch, J.C.26
Vose, J.27
Armitage, J.O.28
Montserrat, E.29
López-Guillermo, A.30
more..
-
28
-
-
67651193848
-
T-cell metagene predicts a favorable prognosis in estrogen receptor-negative and HER2-positive breast cancers
-
10.1186/bcr2234, 2688939, 19272155
-
Rody A, Holtrich U, Pusztai L, Liedtke C, Gaetje R, Ruckhaeberle E, Solbach C, Hanker L, Ahr A, Metzler D, Engels K, Karn T, Kaufmann M. T-cell metagene predicts a favorable prognosis in estrogen receptor-negative and HER2-positive breast cancers. Breast Cancer Res 2009, 11:R15. 10.1186/bcr2234, 2688939, 19272155.
-
(2009)
Breast Cancer Res
, vol.11
-
-
Rody, A.1
Holtrich, U.2
Pusztai, L.3
Liedtke, C.4
Gaetje, R.5
Ruckhaeberle, E.6
Solbach, C.7
Hanker, L.8
Ahr, A.9
Metzler, D.10
Engels, K.11
Karn, T.12
Kaufmann, M.13
-
29
-
-
77949903838
-
Gene expression profiling for survival prediction in pediatric rhabdomyosarcomas: a report from the children's oncology group
-
10.1200/JCO.2008.21.1268, 3040045, 20124188
-
Davicioni E, Anderson JR, Buckley JD, Meyer WH, Triche TJ. Gene expression profiling for survival prediction in pediatric rhabdomyosarcomas: a report from the children's oncology group. J Clin Oncol 2010, 28:1240-1246. 10.1200/JCO.2008.21.1268, 3040045, 20124188.
-
(2010)
J Clin Oncol
, vol.28
, pp. 1240-1246
-
-
Davicioni, E.1
Anderson, J.R.2
Buckley, J.D.3
Meyer, W.H.4
Triche, T.J.5
-
30
-
-
57149089307
-
Stromal gene signatures in large-B-cell lymphomas
-
10.1056/NEJMoa0802885, 19038878
-
Lenz G, Wright G, Dave SS, Xiao W, Powell J, Zhao H, Xu W, Tan B, Goldschmidt N, Iqbal J, Vose J, Bast M, Fu K, Weisenburger DD, Greiner TC, Armitage JO, Kyle A, May L, Gascoyne RD, Connors JM, Troen G, Holte H, Kvaloy S, Dierickx D, Verhoef G, Delabie J, Smeland EB, Jares P, Martinez A, Lopez-Guillermo A, et al. Stromal gene signatures in large-B-cell lymphomas. N Engl J Med 2008, 359:2313-2323. 10.1056/NEJMoa0802885, 19038878.
-
(2008)
N Engl J Med
, vol.359
, pp. 2313-2323
-
-
Lenz, G.1
Wright, G.2
Dave, S.S.3
Xiao, W.4
Powell, J.5
Zhao, H.6
Xu, W.7
Tan, B.8
Goldschmidt, N.9
Iqbal, J.10
Vose, J.11
Bast, M.12
Fu, K.13
Weisenburger, D.D.14
Greiner, T.C.15
Armitage, J.O.16
Kyle, A.17
May, L.18
Gascoyne, R.D.19
Connors, J.M.20
Troen, G.21
Holte, H.22
Kvaloy, S.23
Dierickx, D.24
Verhoef, G.25
Delabie, J.26
Smeland, E.B.27
Jares, P.28
Martinez, A.29
Lopez-Guillermo, A.30
more..
-
31
-
-
79958219642
-
Gene expression profile predicts outcome after anthracycline-based adjuvant chemotherapy in early breast cancer
-
10.1007/s10549-010-1003-z, 20585850
-
Bertucci F, Borie N, Roche H, Bachelot T, Le Doussal JM, Macgrogan G, Debono S, Martinec A, Treilleux I, Finetti P, Esterni B, Extra JM, Geneve J, Hermitte F, Chabannon C, Jacquemier J, Martin AL, Longy M, Maraninchi D, Fert V, Birnbaum D, Viens P. Gene expression profile predicts outcome after anthracycline-based adjuvant chemotherapy in early breast cancer. Breast Cancer Res Treat 2011, 127:363-373. 10.1007/s10549-010-1003-z, 20585850.
-
(2011)
Breast Cancer Res Treat
, vol.127
, pp. 363-373
-
-
Bertucci, F.1
Borie, N.2
Roche, H.3
Bachelot, T.4
Le Doussal, J.M.5
Macgrogan, G.6
Debono, S.7
Martinec, A.8
Treilleux, I.9
Finetti, P.10
Esterni, B.11
Extra, J.M.12
Geneve, J.13
Hermitte, F.14
Chabannon, C.15
Jacquemier, J.16
Martin, A.L.17
Longy, M.18
Maraninchi, D.19
Fert, V.20
Birnbaum, D.21
Viens, P.22
more..
-
32
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
10.1073/pnas.95.25.14863, 24541, 9843981
-
Eisen MB, Spellman PT, Brown PO, Botstein D. Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA 1998, 95:14863-14868. 10.1073/pnas.95.25.14863, 24541, 9843981.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
33
-
-
79958728723
-
A gene expression signature identifies two prognostic subgroups of basal breast cancer
-
10.1007/s10549-010-0897-9, 20490655
-
Sabatier R, Finetti P, Cervera N, Lambaudie E, Esterni B, Mamessier E, Tallet A, Chabannon C, Extra JM, Jacquemier J, Viens P, Birnbaum D, Bertucci F. A gene expression signature identifies two prognostic subgroups of basal breast cancer. Breast Cancer Res Treat 2011, 126:407-420. 10.1007/s10549-010-0897-9, 20490655.
-
(2011)
Breast Cancer Res Treat
, vol.126
, pp. 407-420
-
-
Sabatier, R.1
Finetti, P.2
Cervera, N.3
Lambaudie, E.4
Esterni, B.5
Mamessier, E.6
Tallet, A.7
Chabannon, C.8
Extra, J.M.9
Jacquemier, J.10
Viens, P.11
Birnbaum, D.12
Bertucci, F.13
-
34
-
-
77951641554
-
Identification of subtypes in human epidermal growth factor receptor 2--positive breast cancer reveals a gene signature prognostic of outcome
-
10.1200/JCO.2009.22.8775, 20231686
-
Staaf J, Ringnér M, Vallon-Christersson J, Jönsson G, Bendahl PO, Holm K, Arason A, Gunnarsson H, Hegardt C, Agnarsson BA, Luts L, Grabau D, Fernö M, Malmström PO, Johannsson OT, Loman N, Barkardottir RB, Borg A. Identification of subtypes in human epidermal growth factor receptor 2--positive breast cancer reveals a gene signature prognostic of outcome. J Clin Oncol 2010, 28:1813-1820. 10.1200/JCO.2009.22.8775, 20231686.
-
(2010)
J Clin Oncol
, vol.28
, pp. 1813-1820
-
-
Staaf, J.1
Ringnér, M.2
Vallon-Christersson, J.3
Jönsson, G.4
Bendahl, P.O.5
Holm, K.6
Arason, A.7
Gunnarsson, H.8
Hegardt, C.9
Agnarsson, B.A.10
Luts, L.11
Grabau, D.12
Fernö, M.13
Malmström, P.O.14
Johannsson, O.T.15
Loman, N.16
Barkardottir, R.B.17
Borg, A.18
-
35
-
-
80051666074
-
Ingenuity Pathways Analysis v8.0-2602 (IPA)
-
Ingenuity Pathways Analysis v8.0-2602 (IPA). , http://www.ingenuity.com
-
-
-
-
36
-
-
33745259517
-
Cell-type specific gene expression profiles of leukocytes in human peripheral blood
-
10.1186/1471-2164-7-115, 1479811, 16704732
-
Palmer C, Diehn M, Alizadeh AA, Brown PO. Cell-type specific gene expression profiles of leukocytes in human peripheral blood. BMC Genomics 2006, 7:115. 10.1186/1471-2164-7-115, 1479811, 16704732.
-
(2006)
BMC Genomics
, vol.7
, pp. 115
-
-
Palmer, C.1
Diehn, M.2
Alizadeh, A.A.3
Brown, P.O.4
-
37
-
-
27344435774
-
Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles
-
10.1073/pnas.0506580102, 1239896, 16199517
-
Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA, Paulovich A, Pomeroy SL, Golub TR, Lander ES, Mesirov JP. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 2005, 102:15545-15550. 10.1073/pnas.0506580102, 1239896, 16199517.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
Paulovich, A.7
Pomeroy, S.L.8
Golub, T.R.9
Lander, E.S.10
Mesirov, J.P.11
-
38
-
-
33644830699
-
Reporting recommendations for tumor marker prognostic studies
-
10.1200/JCO.2004.01.0454, 16172462, Statistics Subcommittee of the NCI-EORTC Working Group on Cancer Diagnostics
-
McShane LM, Altman DG, Sauerbrei W, Taube SE, Gion M, Clark GM, . Statistics Subcommittee of the NCI-EORTC Working Group on Cancer Diagnostics Reporting recommendations for tumor marker prognostic studies. J Clin Oncol 2005, 23:9067-9072. 10.1200/JCO.2004.01.0454, 16172462, Statistics Subcommittee of the NCI-EORTC Working Group on Cancer Diagnostics.
-
(2005)
J Clin Oncol
, vol.23
, pp. 9067-9072
-
-
McShane, L.M.1
Altman, D.G.2
Sauerbrei, W.3
Taube, S.E.4
Gion, M.5
Clark, G.M.6
-
39
-
-
34250887474
-
Taking gene-expression profiling to the clinic: when will molecular signatures become relevant to patient care?
-
10.1038/nrc2173, 17585334
-
Sotiriou C, Piccart MJ. Taking gene-expression profiling to the clinic: when will molecular signatures become relevant to patient care?. Nat rev cancer 2007, 7:545-553. 10.1038/nrc2173, 17585334.
-
(2007)
Nat rev cancer
, vol.7
, pp. 545-553
-
-
Sotiriou, C.1
Piccart, M.J.2
-
40
-
-
77951925779
-
Gene expression profiling of breast cancer
-
10.1186/bcr2430, 20602744
-
Pusztai L. Gene expression profiling of breast cancer. Breast Cancer Res 2009, 11(Suppl 3):S11. 10.1186/bcr2430, 20602744.
-
(2009)
Breast Cancer Res
, vol.11
, Issue.SUPPL. 3
-
-
Pusztai, L.1
-
41
-
-
67649421579
-
Effects of infiltrating lymphocytes and estrogen receptor on gene expression and prognosis in breast cancer
-
10.1007/s10549-008-0105-3, 18592372
-
Calabrò A, Beissbarth T, Kuner R, Stojanov M, Benner A, Asslaber M, Ploner F, Zatloukal K, Samonigg H, Poustka A, Sültmann H. Effects of infiltrating lymphocytes and estrogen receptor on gene expression and prognosis in breast cancer. Breast Cancer Res Treat 2009, 116:69-77. 10.1007/s10549-008-0105-3, 18592372.
-
(2009)
Breast Cancer Res Treat
, vol.116
, pp. 69-77
-
-
Calabrò, A.1
Beissbarth, T.2
Kuner, R.3
Stojanov, M.4
Benner, A.5
Asslaber, M.6
Ploner, F.7
Zatloukal, K.8
Samonigg, H.9
Poustka, A.10
Sültmann, H.11
-
42
-
-
34648829133
-
An immune response gene expression module identifies a good prognosis subtype in estrogen receptor negative breast cancer
-
10.1186/gb-2007-8-8-r157, 2374988, 17683518
-
Teschendorff AE, Miremadi A, Pinder SE, Ellis IO, Caldas C. An immune response gene expression module identifies a good prognosis subtype in estrogen receptor negative breast cancer. Genome Biol 2007, 8:R157. 10.1186/gb-2007-8-8-r157, 2374988, 17683518.
-
(2007)
Genome Biol
, vol.8
-
-
Teschendorff, A.E.1
Miremadi, A.2
Pinder, S.E.3
Ellis, I.O.4
Caldas, C.5
-
43
-
-
63349091533
-
A robust classifier of high predictive value to identify good prognosis patients in ER-negative breast cancer
-
10.1186/bcr2138, 2575547, 18755024
-
Teschendorff AE, Caldas C. A robust classifier of high predictive value to identify good prognosis patients in ER-negative breast cancer. Breast Cancer Res 2008, 10:R73. 10.1186/bcr2138, 2575547, 18755024.
-
(2008)
Breast Cancer Res
, vol.10
-
-
Teschendorff, A.E.1
Caldas, C.2
-
44
-
-
36348993857
-
High expression of lymphocyte-associated genes in node-negative HER2+ breast cancers correlates with lower recurrence rates
-
10.1158/0008-5472.CAN-07-0539, 18006808
-
Alexe G, Dalgin GS, Scanfeld D, Tamayo P, Mesirov JP, DeLisi C, Harris L, Barnard N, Martel M, Levine AJ, Ganesan S, Bhanot G. High expression of lymphocyte-associated genes in node-negative HER2+ breast cancers correlates with lower recurrence rates. Cancer Res 2007, 67:10669-10676. 10.1158/0008-5472.CAN-07-0539, 18006808.
-
(2007)
Cancer Res
, vol.67
, pp. 10669-10676
-
-
Alexe, G.1
Dalgin, G.S.2
Scanfeld, D.3
Tamayo, P.4
Mesirov, J.P.5
DeLisi, C.6
Harris, L.7
Barnard, N.8
Martel, M.9
Levine, A.J.10
Ganesan, S.11
Bhanot, G.12
-
45
-
-
36549004041
-
Gene expression profiling and histopathological characterization of triple-negative/basal-like breast carcinomas
-
10.1186/bcr1771, 2242660, 17910759
-
Kreike B, van Kouwenhove M, Horlings H, Weigelt B, Peterse H, Bartelink H, van de Vijver MJ. Gene expression profiling and histopathological characterization of triple-negative/basal-like breast carcinomas. Breast Cancer Res 2007, 9:R65. 10.1186/bcr1771, 2242660, 17910759.
-
(2007)
Breast Cancer Res
, vol.9
-
-
Kreike, B.1
van Kouwenhove, M.2
Horlings, H.3
Weigelt, B.4
Peterse, H.5
Bartelink, H.6
van de Vijver, M.J.7
-
46
-
-
60549099607
-
How different are luminal A and basal breast cancers?
-
10.1002/ijc.24055, 19058218
-
Bertucci F, Finetti P, Cervera N, Charafe-Jauffret E, Buttarelli M, Jacquemier J, Chaffanet M, Maraninchi D, Viens P, Birnbaum D. How different are luminal A and basal breast cancers?. Int J Cancer 2009, 124:1338-1348. 10.1002/ijc.24055, 19058218.
-
(2009)
Int J Cancer
, vol.124
, pp. 1338-1348
-
-
Bertucci, F.1
Finetti, P.2
Cervera, N.3
Charafe-Jauffret, E.4
Buttarelli, M.5
Jacquemier, J.6
Chaffanet, M.7
Maraninchi, D.8
Viens, P.9
Birnbaum, D.10
-
47
-
-
77953413166
-
Immunomodulation of Breast Cancer via Tumor Antigen Specific Th1
-
10.4143/crt.2009.41.3.117, 2757664, 19809560
-
Disis ML, Park KH. Immunomodulation of Breast Cancer via Tumor Antigen Specific Th1. Cancer Res Treat 2009, 41:117-121. 10.4143/crt.2009.41.3.117, 2757664, 19809560.
-
(2009)
Cancer Res Treat
, vol.41
, pp. 117-121
-
-
Disis, M.L.1
Park, K.H.2
-
48
-
-
31044441241
-
Gene expression profiling of breast cell lines identifies potential new basal markers
-
10.1038/sj.onc.1209254, 16288205
-
Charafe-Jauffret E, Ginestier C, Monville F, Finetti P, Adélaïde J, Cervera N, Fekairi S, Xerri L, Jacquemier J, Birnbaum D, Bertucci F. Gene expression profiling of breast cell lines identifies potential new basal markers. Oncogene 2006, 25:2273-2284. 10.1038/sj.onc.1209254, 16288205.
-
(2006)
Oncogene
, vol.25
, pp. 2273-2284
-
-
Charafe-Jauffret, E.1
Ginestier, C.2
Monville, F.3
Finetti, P.4
Adélaïde, J.5
Cervera, N.6
Fekairi, S.7
Xerri, L.8
Jacquemier, J.9
Birnbaum, D.10
Bertucci, F.11
-
49
-
-
78149432308
-
Immune regulation of cancer
-
10.1200/JCO.2009.27.2146, 20516428
-
Disis ML. Immune regulation of cancer. J Clin Oncol 2010, 28:4531-5438. 10.1200/JCO.2009.27.2146, 20516428.
-
(2010)
J Clin Oncol
, vol.28
, pp. 4531-5438
-
-
Disis, M.L.1
-
50
-
-
60249091474
-
Use of tumour-responsive T cells as cancer treatment
-
10.1016/S0140-6736(09)60404-9, 2975274, 19231634
-
Disis ML, Bernhard H, Jaffee EM. Use of tumour-responsive T cells as cancer treatment. Lancet 2009, 373:673-683. 10.1016/S0140-6736(09)60404-9, 2975274, 19231634.
-
(2009)
Lancet
, vol.373
, pp. 673-683
-
-
Disis, M.L.1
Bernhard, H.2
Jaffee, E.M.3
|