-
1
-
-
34249279527
-
Stability and flexibility of epigenetic gene regulation in mammalian development
-
Reik W. Stability and flexibility of epigenetic gene regulation in mammalian development. Nature. 2007;447:425-32.
-
(2007)
Nature
, vol.447
, pp. 425-432
-
-
Reik, W.1
-
2
-
-
84889679340
-
Integrating DNA methylation dynamics into a framework for understanding epigenetic codes
-
Szulwach KE, Jin P. Integrating DNA methylation dynamics into a framework for understanding epigenetic codes. Bioessays. 2014;36:107-17.
-
(2014)
Bioessays
, vol.36
, pp. 107-117
-
-
Szulwach, K.E.1
Jin, P.2
-
3
-
-
84886859638
-
Chromatin dynamics during cellular reprogramming
-
Apostolou E, Hochedlinger K. Chromatin dynamics during cellular reprogramming. Nature. 2013;502:462-71.
-
(2013)
Nature
, vol.502
, pp. 462-471
-
-
Apostolou, E.1
Hochedlinger, K.2
-
4
-
-
0043093697
-
Transposable elements: Targets for early nutritional effects on epigenetic gene regulation
-
Waterland RA, Jirtle RL. Transposable elements: targets for early nutritional effects on epigenetic gene regulation. Mol Cell Biol. 2003;23:5293-300.
-
(2003)
Mol Cell Biol
, vol.23
, pp. 5293-5300
-
-
Waterland, R.A.1
Jirtle, R.L.2
-
5
-
-
0032744380
-
Can reduced folic acid and vitamin B12 levels cause deficient DNA methylation producing mutations which initiate atherosclerosis?
-
Newman PE. Can reduced folic acid and vitamin B12 levels cause deficient DNA methylation producing mutations which initiate atherosclerosis? Med Hypotheses. 1999;53:421-4.
-
(1999)
Med Hypotheses
, vol.53
, pp. 421-424
-
-
Newman, P.E.1
-
6
-
-
77956058729
-
Epigenetics and cardiovascular disease
-
Ordovás JM, Smith CE. Epigenetics and cardiovascular disease. Nat Rev Cardiol. 2010;7:510-9.
-
(2010)
Nat Rev Cardiol
, vol.7
, pp. 510-519
-
-
Ordovás, J.M.1
Smith, C.E.2
-
7
-
-
0032846947
-
Local hypomethylation in atherosclerosis found in rabbit ec-sod gene
-
Laukkanen MO, Mannermaa S, Hiltunen MO, Aittomäki S, Airenne K, Jänne J, et al. Local hypomethylation in atherosclerosis found in rabbit ec-sod gene. Arterioscler Thromb Vasc Biol. 1999;19:2171-8.
-
(1999)
Arterioscler Thromb Vasc Biol
, vol.19
, pp. 2171-2178
-
-
Laukkanen, M.O.1
Mannermaa, S.2
Hiltunen, M.O.3
Aittomäki, S.4
Airenne, K.5
Jänne, J.6
-
8
-
-
84897022813
-
Unraveling the DNA methylome of atherosclerosis
-
Zaina S. Unraveling the DNA methylome of atherosclerosis. Curr Opin Lipidol. 2014;25:148-53.
-
(2014)
Curr Opin Lipidol
, vol.25
, pp. 148-153
-
-
Zaina, S.1
-
9
-
-
84917721547
-
A DNA methylation map of human atherosclerosis
-
Zaina S, Heyn H, Carmona FJ, Varol N, Sayols S, Condom E, et al. A DNA methylation map of human atherosclerosis. Circ Cardiovasc Genet. 2014;7:692-700.
-
(2014)
Circ Cardiovasc Genet
, vol.7
, pp. 692-700
-
-
Zaina, S.1
Heyn, H.2
Carmona, F.J.3
Varol, N.4
Sayols, S.5
Condom, E.6
-
10
-
-
84903784400
-
Flow-dependent epigenetic DNA methylation regulates endothelial gene expression and atherosclerosis
-
Dunn J, Qiu H, Kim S, Jjingo D, Hoffman R, Kim CW, et al. Flow-dependent epigenetic DNA methylation regulates endothelial gene expression and atherosclerosis. J Clin Invest. 2014;124:3187-99.
-
(2014)
J Clin Invest
, vol.124
, pp. 3187-3199
-
-
Dunn, J.1
Qiu, H.2
Kim, S.3
Jjingo, D.4
Hoffman, R.5
Kim, C.W.6
-
11
-
-
84914132768
-
Inhibiting DNA Methylation by 5-aza-2′-deoxycytidine ameliorates atherosclerosis through suppressing macrophage inflammation
-
[Epub ahead of print]
-
Cao Q, Wang X, Jia L, Mondal AK, Diallo A, Hawkins GA, et al. Inhibiting DNA Methylation by 5-aza-2′-deoxycytidine ameliorates atherosclerosis through suppressing macrophage inflammation. Endocrinology. 2014. [Epub ahead of print].
-
(2014)
Endocrinology
-
-
Cao, Q.1
Wang, X.2
Jia, L.3
Mondal, A.K.4
Diallo, A.5
Hawkins, G.A.6
-
12
-
-
84906050534
-
Epigenome-wide association study of fasting blood lipids in the genetics of lipid lowering drugs and diet network study
-
[Epub ahead of print]
-
Irvin MR, Zhi D, Joehanes R, Mendelson M, Aslibekyan S, Claas SA, et al. Epigenome-wide association study of fasting blood lipids in the genetics of lipid lowering drugs and diet network study. Circulation. 2014. [Epub ahead of print].
-
(2014)
Circulation
-
-
Irvin, M.R.1
Zhi, D.2
Joehanes, R.3
Mendelson, M.4
Aslibekyan, S.5
Claas, S.A.6
-
13
-
-
84893065053
-
Epigenomewide association study of fasting measures of glucose, insulin, and HOMA-IR in the genetics of lipid lowering drugs and diet network study
-
Hidalgo B, Irvin MR, Sha J, Zhi D, Aslibekyan S, Absher D, et al. Epigenomewide association study of fasting measures of glucose, insulin, and HOMA-IR in the genetics of lipid lowering drugs and diet network study. Diabetes. 2014;63:801-7.
-
(2014)
Diabetes
, vol.63
, pp. 801-807
-
-
Hidalgo, B.1
Irvin, M.R.2
Sha, J.3
Zhi, D.4
Aslibekyan, S.5
Absher, D.6
-
14
-
-
84921316380
-
DNA methylation and body-mass index: A genome-wide analysis
-
Dick KJ, Nelson CP, Tsaprouni L, Sandling JK, Aïssi D, Wahl S, et al. DNA methylation and body-mass index: a genome-wide analysis. Lancet. 2014;383:1990-8.
-
(2014)
Lancet
, vol.383
, pp. 1990-1998
-
-
Dick, K.J.1
Nelson, C.P.2
Tsaprouni, L.3
Sandling, J.K.4
Aïssi, D.5
Wahl, S.6
-
15
-
-
79958754527
-
Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome
-
Sandoval J, Heyn H, Moran S, Serra-Musach J, Pujana MA, Bibikova M, et al. Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome. Epigenetics. 2011;6:692-702.
-
(2011)
Epigenetics
, vol.6
, pp. 692-702
-
-
Sandoval, J.1
Heyn, H.2
Moran, S.3
Serra-Musach, J.4
Pujana, M.A.5
Bibikova, M.6
-
16
-
-
84862979818
-
Distinct DNA methylomes of newborns and centenarians
-
Heyn H, Li N, Ferreira HJ, Moran S, Pisano DG, Gomez A, et al. Distinct DNA methylomes of newborns and centenarians. Proc Natl Acad Sci U S A. 2012;109:10522-7.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 10522-10527
-
-
Heyn, H.1
Li, N.2
Ferreira, H.J.3
Moran, S.4
Pisano, D.G.5
Gomez, A.6
-
17
-
-
0026592806
-
Spontaneous hypercholesterolemia and arterial lesions in mice lacking apolipoprotein e
-
Zhang SH, Reddick RL, Piedrahita JA, Maeda N. Spontaneous hypercholesterolemia and arterial lesions in mice lacking apolipoprotein E. Science. 1992;258:468-71.
-
(1992)
Science
, vol.258
, pp. 468-471
-
-
Zhang, S.H.1
Reddick, R.L.2
Piedrahita, J.A.3
Maeda, N.4
-
18
-
-
67649884743
-
Fast and accurate short read alignment with burrowswheeler transform
-
Li H, Durbin R. Fast and accurate short read alignment with burrowswheeler transform. Bioinformatics. 2009;25:1754-60.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
19
-
-
83055192078
-
Differential expression in RNA-seq: A matter of depth
-
Tarazona S, Garcia-Alcalde F, Dopazo J, Ferrer A, Conesa A. Differential expression in RNA-seq: a matter of depth. Genome Res. 2011;21:4436.
-
(2011)
Genome Res
, vol.21
-
-
Tarazona, S.1
Garcia-Alcalde, F.2
Dopazo, J.3
Ferrer, A.4
Conesa, A.5
-
20
-
-
78649475003
-
Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis
-
Du P, Zhang X, Huang CC, Jafari N, Kibbe WA, Hou L, et al. Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis. BMC Bioinformatics. 2010;11:587.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 587
-
-
Du, P.1
Zhang, X.2
Huang, C.C.3
Jafari, N.4
Kibbe, W.A.5
Hou, L.6
-
21
-
-
0030052857
-
An essential role for platelet-derived growth factor in neointima formation in human saphenous vein in vitro
-
George SJ, Williams A, Newby AC. An essential role for platelet-derived growth factor in neointima formation in human saphenous vein in vitro. Atherosclerosis. 1996;120:227-40.
-
(1996)
Atherosclerosis
, vol.120
, pp. 227-240
-
-
George, S.J.1
Williams, A.2
Newby, A.C.3
-
22
-
-
84865680532
-
Prdm3 and Prdm16 are H3K9me1 methyltransferases required for mammalian heterochromatin integrity
-
Pinheiro I, Margueron R, Shukeir N, Eisold M, Fritzsch C, Richter FM, et al. Prdm3 and Prdm16 are H3K9me1 methyltransferases required for mammalian heterochromatin integrity. Cell. 2012;150:948-60.
-
(2012)
Cell
, vol.150
, pp. 948-960
-
-
Pinheiro, I.1
Margueron, R.2
Shukeir, N.3
Eisold, M.4
Fritzsch, C.5
Richter, F.M.6
-
23
-
-
83355163350
-
Peroxisome proliferator-activated receptor α (PPARα) induces PPARγ coactivator 1α (PGC-1α) gene expression and contributes to thermogenic activation of brown fat: Involvement of PRDM16
-
Hondares E, Rosell M, Díaz-Delfín J, Olmos Y, Monsalve M, Iglesias R, et al. Peroxisome proliferator-activated receptor α (PPARα) induces PPARγ coactivator 1α (PGC-1α) gene expression and contributes to thermogenic activation of brown fat: involvement of PRDM16. J Biol Chem. 2011;286:43112-22.
-
(2011)
J Biol Chem
, vol.286
, pp. 43112-43122
-
-
Hondares, E.1
Rosell, M.2
Díaz-Delfín, J.3
Olmos, Y.4
Monsalve, M.5
Iglesias, R.6
-
24
-
-
84863393314
-
A gene expression signature that classifies human atherosclerotic plaque by relative inflammation status
-
Puig O, Yuan J, Stepaniants S, Zieba R, Zycband E, Morris M, et al. A gene expression signature that classifies human atherosclerotic plaque by relative inflammation status. Circ Cardiovasc Genet. 2011;4:595-604.
-
(2011)
Circ Cardiovasc Genet
, vol.4
, pp. 595-604
-
-
Puig, O.1
Yuan, J.2
Stepaniants, S.3
Zieba, R.4
Zycband, E.5
Morris, M.6
-
25
-
-
84872175226
-
Integrative pathway dissection of molecular mechanisms of moxLDL-induced vascular smooth muscle phenotype transformation
-
Karagiannis GS, Weile J, Bader GD, Minta J. Integrative pathway dissection of molecular mechanisms of moxLDL-induced vascular smooth muscle phenotype transformation. BMC Cardiovasc Disord. 2013;13:4.
-
(2013)
BMC Cardiovasc Disord
, vol.13
, pp. 4
-
-
Karagiannis, G.S.1
Weile, J.2
Bader, G.D.3
Minta, J.4
-
26
-
-
0031886864
-
The peroxisome proliferatoractivated receptor-gamma is a negative regulator of macrophage activation
-
Ricote M, Li AC, Willson TM, Kelly CJ, Glass CK. The peroxisome proliferatoractivated receptor-gamma is a negative regulator of macrophage activation. Nature. 1998;391:79-82.
-
(1998)
Nature
, vol.391
, pp. 79-82
-
-
Ricote, M.1
Li, A.C.2
Willson, T.M.3
Kelly, C.J.4
Glass, C.K.5
-
27
-
-
84856194703
-
Genetic basis of atherosclerosis: Insights from mice and humans
-
Stylianou IM, Bauer RC, Reilly MP, Rader DJ. Genetic basis of atherosclerosis: insights from mice and humans. Circ Res. 2012;110:337-55.
-
(2012)
Circ Res
, vol.110
, pp. 337-355
-
-
Stylianou, I.M.1
Bauer, R.C.2
Reilly, M.P.3
Rader, D.J.4
-
28
-
-
77953223693
-
Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain
-
Gibbs JR, van der Brug MP, Hernandez DG, Traynor BJ, Nalls MA, Lai SL, et al. Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain. PLoS Genet. 2010;6:e1000952.
-
(2010)
PLoS Genet
, vol.6
, pp. e1000952
-
-
Gibbs, J.R.1
Van Der Brug, M.P.2
Hernandez, D.G.3
Traynor, B.J.4
Nalls, M.A.5
Lai, S.L.6
-
29
-
-
47049083725
-
Detection of altered global DNA methylation in coronary artery disease patients
-
Sharma P, Kumar J, Garg G, Kumar A, Patowary A, Karthikeyan G, et al. Detection of altered global DNA methylation in coronary artery disease patients. DNA Cell Biol. 2008;27:357-65.
-
(2008)
DNA Cell Biol
, vol.27
, pp. 357-365
-
-
Sharma, P.1
Kumar, J.2
Garg, G.3
Kumar, A.4
Patowary, A.5
Karthikeyan, G.6
-
30
-
-
69249217999
-
Hypermethylation of estrogen receptor-alpha gene in atheromatosis patients and its correlation with homocysteine
-
Huang YS, Zhi YF, Wang SR. Hypermethylation of estrogen receptor-alpha gene in atheromatosis patients and its correlation with homocysteine. Pathophysiology. 2009;16:259-65.
-
(2009)
Pathophysiology
, vol.16
, pp. 259-265
-
-
Huang, Y.S.1
Zhi, Y.F.2
Wang, S.R.3
-
31
-
-
84873910693
-
SuperTAG methylation-specific digital karyotyping reveals uremia-induced epigenetic dysregulation of atherosclerosis-related genes
-
Zawada AM, Rogacev KS, Hummel B, Grün OS, Friedrich A, Rotter B, et al. SuperTAG methylation-specific digital karyotyping reveals uremia-induced epigenetic dysregulation of atherosclerosis-related genes. Circ Cardiovasc Genet. 2012;5:611-20.
-
(2012)
Circ Cardiovasc Genet
, vol.5
, pp. 611-620
-
-
Zawada, A.M.1
Rogacev, K.S.2
Hummel, B.3
Grün, O.S.4
Friedrich, A.5
Rotter, B.6
-
32
-
-
84865569776
-
Homocysteine activates vascular smooth muscle cells by DNA demethylation of platelet-derived growth factor in endothelial cells
-
Zhang D, Chen Y, Xie X, Liu J, Wang Q, Kong W, et al. Homocysteine activates vascular smooth muscle cells by DNA demethylation of platelet-derived growth factor in endothelial cells. J Mol Cell Cardiol. 2012;53:487-96.
-
(2012)
J Mol Cell Cardiol
, vol.53
, pp. 487-496
-
-
Zhang, D.1
Chen, Y.2
Xie, X.3
Liu, J.4
Wang, Q.5
Kong, W.6
-
33
-
-
24644463193
-
Inactivation of monocarboxylate transporter MCT3 by DNA methylation in atherosclerosis
-
Zhu S, Goldschmidt-Clermont PJ, Dong C. Inactivation of monocarboxylate transporter MCT3 by DNA methylation in atherosclerosis. Circulation. 2005;112:1353-61.
-
(2005)
Circulation
, vol.112
, pp. 1353-1361
-
-
Zhu, S.1
Goldschmidt-Clermont, P.J.2
Dong, C.3
-
34
-
-
7544231794
-
Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cells
-
Lorincz MC, Dickerson DR, Schmitt M, Groudine M. Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cells. Nat Struct Mol Biol. 2004;11:1068-75.
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 1068-1075
-
-
Lorincz, M.C.1
Dickerson, D.R.2
Schmitt, M.3
Groudine, M.4
-
35
-
-
39549093550
-
An epigenetic role for noncoding RNAs and intragenic DNA methylation
-
Flanagan JM, Wild L. An epigenetic role for noncoding RNAs and intragenic DNA methylation. Genome Biol. 2007;8:307.
-
(2007)
Genome Biol
, vol.8
, pp. 307
-
-
Flanagan, J.M.1
Wild, L.2
-
36
-
-
0025138248
-
Involvement of a NF-kappa B-like transcription factor in the activation of the interleukin-6 gene by inflammatory lymphokines
-
Shimizu H, Mitomo K, Watanabe T, Okamoto S, Yamamoto K. Involvement of a NF-kappa B-like transcription factor in the activation of the interleukin-6 gene by inflammatory lymphokines. Mol Cell Biol. 1990;10:561-8.
-
(1990)
Mol Cell Biol
, vol.10
, pp. 561-568
-
-
Shimizu, H.1
Mitomo, K.2
Watanabe, T.3
Okamoto, S.4
Yamamoto, K.5
-
37
-
-
19944431570
-
Arginine methyltransferase CARM1 is a promoter-specific regulator of NF-kappaBdependent gene expression
-
Covic M, Hassa PO, Saccani S, Buerki C, Meier NI, Lombardi C, et al. Arginine methyltransferase CARM1 is a promoter-specific regulator of NF-kappaBdependent gene expression. EMBO J. 2005;24:85-96.
-
(2005)
EMBO J
, vol.24
, pp. 85-96
-
-
Covic, M.1
Hassa, P.O.2
Saccani, S.3
Buerki, C.4
Meier, N.I.5
Lombardi, C.6
-
38
-
-
0344827206
-
Mutation of MEF2A in an inherited disorder with features of coronary artery disease
-
Wang L, Fan C, Topol SE, Topol EJ, Wang Q. Mutation of MEF2A in an inherited disorder with features of coronary artery disease. Science. 2003;302:1578-81.
-
(2003)
Science
, vol.302
, pp. 1578-1581
-
-
Wang, L.1
Fan, C.2
Topol, S.E.3
Topol, E.J.4
Wang, Q.5
-
39
-
-
84857961290
-
The effects of myocyte enhancer factor 2A gene on the proliferation, migration and phenotype of vascular smooth muscle cells
-
Zhao W, Zhao SP, Peng DQ. The effects of myocyte enhancer factor 2A gene on the proliferation, migration and phenotype of vascular smooth muscle cells. Cell Biochem Funct. 2012;30:108-13.
-
(2012)
Cell Biochem Funct
, vol.30
, pp. 108-113
-
-
Zhao, W.1
Zhao, S.P.2
Peng, D.Q.3
-
40
-
-
0033552883
-
Atherosclerosis - An inflammatory disease
-
Ross R. Atherosclerosis - an inflammatory disease. N Engl J Med. 1999;340:115-26.
-
(1999)
N Engl J Med
, vol.340
, pp. 115-126
-
-
Ross, R.1
|