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Volumn 6, Issue MAR, 2015, Pages

Genome-wide identification, isolation and expression analysis of auxin response factor (ARF) gene family in sweet orange (citrus sinensis)

Author keywords

ARF gene; Auxin; Citrus; Expression analysis; Phylogenetic analysis; Sweet orange

Indexed keywords

CITRUS; CITRUS SINENSIS;

EID: 84928018209     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2015.00119     Document Type: Article
Times cited : (91)

References (50)
  • 1
    • 0029197507 scopus 로고
    • The value of prior knowledge in discovering motifs with MEME
    • Bailey, T. L., and Elkan, C. (1995). The value of prior knowledge in discovering motifs with MEME. Proc. Int. Conf. Intell. Syst. Mol. Biol. 3, 21-29.
    • (1995) Proc. Int. Conf. Intell. Syst. Mol. Biol , vol.3 , pp. 21-29
    • Bailey, T.L.1    Elkan, C.2
  • 2
    • 77949397618 scopus 로고    scopus 로고
    • The role of auxin and gib- berellin in tomato fruit set
    • De Jong, M., Mariani, C., and Vriezen, W. H. (2009). The role of auxin and gib- berellin in tomato fruit set. J. Exp. Bot. 60, 1523-1532. doi: 10.1093/jxb/erp094
    • (2009) J. Exp. Bot , vol.60 , pp. 1523-1532
    • De Jong, M.1    Mariani, C.2    Vriezen, W.H.3
  • 3
    • 81355149868 scopus 로고    scopus 로고
    • Analysis of the NAC transcription factor gene family in citrus reveals a novel member involved in multiple abiotic stress responses
    • De Oliveira, T. M., Cidade, L. C., Gesteira, A. S., Coelho Filho, M. A., Soares Filho, W. S., and Costa, M. G. (2011). Analysis of the NAC transcription factor gene family in citrus reveals a novel member involved in multiple abiotic stress responses. Tree Genet. Genomes 7, 1123-1134. doi: 10.1007/s11295-011-0400-8
    • (2011) Tree Genet. Genomes , vol.7 , pp. 1123-1134
    • De Oliveira, T.M.1    Cidade, L.C.2    Gesteira, A.S.3    Coelho Filho, M.A.4    Soares Filho, W.S.5    Costa, M.G.6
  • 4
    • 27744526218 scopus 로고    scopus 로고
    • AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FAC- TOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana
    • Ellis, C. M., Nagpal, P., Young, J. C., Hagen, G., Guilfoyle, T. J., and Reed, J. W. (2005). AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FAC- TOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana. Development 132,4563-4574. doi: 10.1242/dev.02012
    • (2005) Development , vol.132 , pp. 4563-4574
    • Ellis, C.M.1    Nagpal, P.2    Young, J.C.3    Hagen, G.4    Guilfoyle, T.J.5    Reed, J.W.6
  • 5
    • 33646165249 scopus 로고    scopus 로고
    • Regulation ofAUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis
    • Fahlgren, N., Montgomery, T. A., Howell, M. D., Allen, E., Dvorak, S. K., Alexander, A. L., et al. (2006). Regulation ofAUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Curr. Biol. 16, 939-944. doi: 10.1016/j.cub.2006.03.065
    • (2006) Curr. Biol , vol.16 , pp. 939-944
    • Fahlgren, N.1    Montgomery, T.A.2    Howell, M.D.3    Allen, E.4    Dvorak, S.K.5    Alexander, A.L.6
  • 6
    • 77956803022 scopus 로고    scopus 로고
    • Parallel structural evolution of auxin response factors in the angiosperms
    • Finet, C., Fourquin, C., Vinauger, M., Berne-Dedieu, A., Chambrier, P., Pain- davoine, S., et al. (2010). Parallel structural evolution of auxin response factors in the angiosperms. Plant J. 63, 952-959. doi: 10.1111/j.1365-313X.2010.04292.x
    • (2010) Plant J , vol.63 , pp. 952-959
    • Finet, C.1    Fourquin, C.2    Vinauger, M.3    Berne-Dedieu, A.4    Chambrier, P.5    Pain-Davoine, S.6
  • 7
    • 33746354306 scopus 로고    scopus 로고
    • Plant signalling: The inexorable rise of auxin
    • Fleming A. J. (2006). Plant signalling: The inexorable rise of auxin. Trends CellBiol. 16, 397-402. doi: 10.1016/j.tcb.2006.06.005
    • (2006) Trends Cellbiol , vol.16 , pp. 397-402
    • Fleming, A.J.1
  • 8
    • 33750010136 scopus 로고    scopus 로고
    • PICKLE is required for SOLITARY-ROOT/IAA14-mediated repression of ARF7 and ARF19 activity during Arabidopsis lateral root initiation
    • Fukaki, H., Taniguchi, N., and Tasaka, M. (2006). PICKLE is required for SOLITARY-ROOT/IAA14-mediated repression of ARF7 and ARF19 activity during Arabidopsis lateral root initiation. Plant J. 48, 380-389. doi: 10.1111/j.1365-313X.2006.02882.x
    • (2006) Plant J , vol.48 , pp. 380-389
    • Fukaki, H.1    Taniguchi, N.2    Tasaka, M.3
  • 9
    • 34848909529 scopus 로고    scopus 로고
    • Auxin response factors
    • Guilfoyle, T. J., and Hagen, G. (2007). Auxin response factors. Curr. Opin. Plant Biol. 10, 453-460. doi: 10.1016/j.pbi.2007.08.014
    • (2007) Curr. Opin. Plant Biol , vol.10 , pp. 453-460
    • Guilfoyle, T.J.1    Hagen, G.2
  • 10
    • 54449091448 scopus 로고    scopus 로고
    • GSDS: A gene structure display server
    • Guo, A. Y., Zhu, Q. H., Chen, X., and Luo, J. C. (2007). GSDS: A gene structure display server. Yi Chuan 29, 1023-1026. doi: 10.1360/yc-007-1023
    • (2007) Yi Chuan , vol.29 , pp. 1023-1026
    • Guo, A.Y.1    Zhu, Q.H.2    Chen, X.3    Luo, J.C.4
  • 11
    • 0035999463 scopus 로고    scopus 로고
    • Auxin-responsive gene expression: Genes, promoters and regulatory factors
    • Hagen, G., and Guilfoyle, T. (2002). Auxin-responsive gene expression: Genes, promoters and regulatory factors. Plant Mol. Biol. 49, 373-385. doi: 10.1023/A.1015207114117
    • (2002) Plant Mol. Biol , vol.49 , pp. 373-385
    • Hagen, G.1    Guilfoyle, T.2
  • 12
    • 0034078213 scopus 로고    scopus 로고
    • The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissue
    • Harper, R. M., Stowe-Evans, E.L., Luesse, D. R., Muto, H., Tatematsu, K., Watahiki, M. K., et al. (2000). The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissue. Plant Cell 12,757-770. doi: 10.1105/tpc.12.5.757
    • (2000) Plant Cell , vol.12 , pp. 757-770
    • Harper, R.M.1    Stowe-Evans, E.L.2    Luesse, D.R.3    Muto, H.4    Tatematsu, K.5    Watahiki, M.K.6
  • 13
    • 84892477761 scopus 로고    scopus 로고
    • Genome- wide identification, classification, expression profiling, and SSR Marker development ofthe MADS-boxgene familyin Citrus
    • Hou, X.-J., Liu, S.-R., Khan, M. R. G., Hu, C.-G., and Zhang, J.-Z. (2014). Genome- wide identification, classification, expression profiling, and SSR Marker development ofthe MADS-boxgene familyin Citrus. PlantMol. Biol. Rep. 32,28-41. doi: 10.1007/s11105-013-0597-9
    • (2014) Plantmol. Biol. Rep , vol.32 , pp. 28-41
    • Hou, X.-J.1    Liu, S.-R.2    Khan, M.3    Hu, C.-G.4    Zhang, J.-Z.5
  • 14
    • 37849021330 scopus 로고    scopus 로고
    • Genome- wide analysis ofAux/IAA and ARF gene families in Populus trichocarpa
    • Kalluri, U. C., DiFazio, S. P., Brunner, A. M., and Tuskan, G. A. (2007). Genome- wide analysis ofAux/IAA and ARF gene families in Populus trichocarpa. BMC Plant Biol. 7:59. doi: 10.1186/1471-2229-7-59
    • (2007) BMC Plant Biol , vol.7 , pp. 59
    • Kalluri, U.C.1    Difazio, S.P.2    Brunner, A.M.3    Tuskan, G.A.4
  • 15
    • 84858746277 scopus 로고    scopus 로고
    • Deletion of MP/ARF5 domains III and IV reveals a requirement for Aux/IAA regulation in Arabidopsis leaf vascular patterning
    • Krogan, N. T., Ckurshumova, W., Marcos, D., Caragea, A. E., and Berleth, T. (2012). Deletion of MP/ARF5 domains III and IV reveals a requirement for Aux/IAA regulation in Arabidopsis leaf vascular patterning. New Phytol. 194, 391-401. doi: 10.1111/j.1469-8137.2012.04064.x
    • (2012) New Phytol , vol.194 , pp. 391-401
    • Krogan, N.T.1    Ckurshumova, W.2    Marcos, D.3    Caragea, A.E.4    Berleth, T.5
  • 16
    • 79952983991 scopus 로고    scopus 로고
    • Genome-wide analysis of auxin response factor (ARF) gene family from tomato and analysis of their role in flower and fruit development
    • Kumar, R., Tyagi, A. K., and Sharma, A. K. (2011). Genome-wide analysis of auxin response factor (ARF) gene family from tomato and analysis of their role in flower and fruit development. Mol. Genet. Genomics 285, 245-260. doi: 10.1007/s00438-011-0602-7
    • (2011) Mol. Genet. Genomics , vol.285 , pp. 245-260
    • Kumar, R.1    Tyagi, A.K.2    Sharma, A.K.3
  • 17
    • 0002162543 scopus 로고
    • N-1- napthylphthalamic-acid-binding activity of a plasma membrane-rich fraction from maize coleoptiles
    • Lembi, C. A., Morre, D. J., St-Thomson, K., and Hertel, R. (1971). N-1- napthylphthalamic-acid-binding activity of a plasma membrane-rich fraction from maize coleoptiles. Planta 99, 37-45. doi: 10.1007/BF00392118
    • (1971) Planta , vol.99 , pp. 37-45
    • Lembi, C.A.1    Morre, D.J.2    St-Thomson, K.3    Hertel, R.4
  • 18
    • 0036085047 scopus 로고    scopus 로고
    • PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
    • Lescot, M., Dehais, P., Thijs, G., Marchal, K., Moreau, Y., Van de Peer, Y., et al. (2002). PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Res. 30, 325-327. doi: 10.1093/nar/30.1.325
    • (2002) Nucleic Acids Res , vol.30 , pp. 325-327
    • Lescot, M.1    Dehais, P.2    Thijs, G.3    Marchal, K.4    Moreau, Y.5    Van De Peer, Y.6
  • 19
    • 0347030117 scopus 로고    scopus 로고
    • Factors influencing Agrobacterium- mediated embryogenic callus transformation of Valencia sweet orange (Citrus sinensis) containing the pTA29-barnase gene
    • Li, D. D., Shi, W., and Deng, X. X. (2003). Factors influencing Agrobacterium- mediated embryogenic callus transformation of Valencia sweet orange (Citrus sinensis) containing the pTA29-barnase gene. Tree Physiol. 23, 1209-1215. doi: 10.1093/treephys/23.17.1209
    • (2003) Tree Physiol , vol.23 , pp. 1209-1215
    • Li, D.D.1    Shi, W.2    Deng, X.X.3
  • 20
    • 34748913056 scopus 로고    scopus 로고
    • Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stages
    • Liu, P.-P., Montgomery, T. A., Fahlgren, N., Kasschau, K. D., Nonogaki, H., and Carrington, J. C. (2007). Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stages. PlantJ. 52, 133-146. doi: 10.1111/j.1365-313X.2007.03218.x
    • (2007) Plantj , vol.52 , pp. 133-146
    • Liu, P.-P.1    Montgomery, T.A.2    Fahlgren, N.3    Kasschau, K.D.4    Nonogaki, H.5    Carrington, J.C.6
  • 21
    • 24944493388 scopus 로고    scopus 로고
    • MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression ofearlyauxin response genes
    • Mallory, A. C., Bartel, D. P., and Bartel, B. (2005). MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression ofearlyauxin response genes. Plant Cell 17, 1360-1375. doi: 10.1105/tpc.105.031716
    • (2005) Plant Cell , vol.17 , pp. 1360-1375
    • Mallory, A.C.1    Bartel, D.P.2    Bartel, B.3
  • 22
    • 79955547137 scopus 로고    scopus 로고
    • Role of auxins, polyamines and ethylene in root formation and growth in sweet orange. Biol
    • Mendes, A., Cidade, L., Otoni, W., Soares-Filho, W., and Costa, M. (2011). Role of auxins, polyamines and ethylene in root formation and growth in sweet orange. Biol. Plant. 55, 375-378. doi: 10.1007/s10535-011-0058-y
    • (2011) Plant , vol.55 , pp. 375-378
    • Mendes, A.1    Cidade, L.2    Otoni, W.3    Soares-Filho, W.4    Costa, M.5
  • 23
    • 84860358239 scopus 로고    scopus 로고
    • Synthetic auxin 3 5 6-TPA provokes citrus clementina (Hort ex Tan) fruitlet abscission by reducing photosynthate availability
    • Mesejo, C., Rosito, S., Reig, C., Martinez-Fuentes, A., and Agusti, M. (2012). Synthetic auxin 3, 5, 6-TPA provokes citrus clementina (Hort. ex Tan) fruitlet abscission by reducing photosynthate availability. J. Plant Growth Regul. 31, 186-194. doi: 10.1007/s00344-011-9230-z
    • (2012) J. Plant Growth Regul , vol.31 , pp. 186-194
    • Mesejo, C.1    Rosito, S.2    Reig, C.3    Martinez-Fuentes, A.4    Agusti, M.5
  • 24
    • 84867399099 scopus 로고    scopus 로고
    • Auxin response factor gene family in Brassica rapa: Genomic organization, divergence, expression, and evolution
    • Mun, J.-H., Yu, H.-J., Shin, J. Y., Oh, M., Hwang, H.-J., and Chung, H. (2012). Auxin response factor gene family in Brassica rapa: Genomic organization, divergence, expression, and evolution. Mol. Genet. Genomics 287, 765-784. doi: 10.1007/s00438-012-0718-4
    • (2012) Mol. Genet. Genomics , vol.287 , pp. 765-784
    • Mun, J.-H.1    Yu, H.-J.2    Shin, J.Y.3    Oh, M.4    Hwang, H.-J.5    Chung, H.6
  • 25
    • 27144474564 scopus 로고    scopus 로고
    • Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation
    • Nagpal, P., Ellis, C. M., Weber, H., Ploense, S. E., Barkawi, L. S., Guilfoyle, T. J., et al. (2005). Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation. Development 132, 4107-4118. doi: 10.1242/dev.01955
    • (2005) Development , vol.132 , pp. 4107-4118
    • Nagpal, P.1    Ellis, C.M.2    Weber, H.3    Ploense, S.E.4    Barkawi, L.S.5    Guilfoyle, T.J.6
  • 26
    • 33645973556 scopus 로고    scopus 로고
    • The Ara- bidopsis STV1 protein, responsible for translation reinitiation, is required for auxin-mediated gynoecium patterning
    • Nishimura, T., Wada, T., Yamamoto, K. T., and Okada, K. (2005). The Ara- bidopsis STV1 protein, responsible for translation reinitiation, is required for auxin-mediated gynoecium patterning. Plant Cell 17, 2940-2953. doi: 10.1105/tpc.105.036533
    • (2005) Plant Cell , vol.17 , pp. 2940-2953
    • Nishimura, T.1    Wada, T.2    Yamamoto, K.T.3    Okada, K.4
  • 27
    • 20044394137 scopus 로고    scopus 로고
    • Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: Unique and overlapping functions of ARF7 and ARF19
    • Okushima, Y., Overvoorde, P. J., Arima, K., Alonso, J. M., Chan, A., Chang, C., et al. (2005). Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19. Plant Cell 17, 444-463. doi: 10.1105/tpc.104.028316
    • (2005) Plant Cell , vol.17 , pp. 444-463
    • Okushima, Y.1    Overvoorde, P.J.2    Arima, K.3    Alonso, J.M.4    Chan, A.5    Chang, C.6
  • 28
    • 29544441788 scopus 로고    scopus 로고
    • Auxin response factors mediate Ara- bidopsis organ asymmetry via modulation of KANADI activity
    • Pekker, I., Alvarez, J. P., and Eshed, Y. (2005). Auxin response factors mediate Ara- bidopsis organ asymmetry via modulation of KANADI activity. Plant Cell 17, 2899-2910. doi: 10.1105/tpc.105.034876
    • (2005) Plant Cell , vol.17 , pp. 2899-2910
    • Pekker, I.1    Alvarez, J.P.2    Eshed, Y.3
  • 29
    • 4544275282 scopus 로고    scopus 로고
    • Early events in Agrobacterium-mediated genetic transformation of citrus explants
    • Pena, L., Perez, R. M., Cervera, M., Juarez, J. A., and Navarro, L. (2004). Early events in Agrobacterium-mediated genetic transformation of citrus explants. Ann. Bot. 94, 67-74. doi: 10.1093/aob/mch117
    • (2004) Ann. Bot , vol.94 , pp. 67-74
    • Pena, L.1    Perez, R.M.2    Cervera, M.3    Juarez, J.A.4    Navarro, L.5
  • 30
    • 67149111588 scopus 로고    scopus 로고
    • Evolution of the B3 DNA binding superfamily: Newinsights into REM family gene diversification
    • Romanel, E. A., Schrago, C. G., Counago, R. M., Russo, C. A., and Alves- Ferreira, M. (2009). Evolution of the B3 DNA binding superfamily: Newinsights into REM family gene diversification. PLoS ONE 4:e5791. doi: 10.1371/jour-nal.pone.0005791
    • (2009) Plos ONE , vol.4
    • Romanel, E.A.1    Schrago, C.G.2    Counago, R.M.3    Russo, C.A.4    Alves-Ferreira, M.5
  • 31
    • 32244447078 scopus 로고    scopus 로고
    • The AUXIN RESPONSE FACTOR 2 gene of Arabidopsis links auxin signalling, cell division, and the size of seeds and other organs
    • Schruff, M. C., Spielman, M., Tiwari, S., Adams, S., Fenby, N., and Scott, R. J. (2006). The AUXIN RESPONSE FACTOR 2 gene of Arabidopsis links auxin signalling, cell division, and the size of seeds and other organs. Development 133, 251-261. doi: 10.1242/dev.02194
    • (2006) Development , vol.133 , pp. 251-261
    • Schruff, M.C.1    Spielman, M.2    Tiwari, S.3    Adams, S.4    Fenby, N.5    Scott, R.J.6
  • 32
    • 77956562704 scopus 로고    scopus 로고
    • Functional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.)
    • Shen, C., Wang, S., Bai, Y., Wu, Y., Zhang, S., Chen, M., et al. (2010). Functional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.). J. Exp. Bot. 61, 3971-3981. doi: 10.1093/jxb/erq208
    • (2010) J. Exp. Bot , vol.61 , pp. 3971-3981
    • Shen, C.1    Wang, S.2    Bai, Y.3    Wu, Y.4    Zhang, S.5    Chen, M.6
  • 33
    • 84890330527 scopus 로고    scopus 로고
    • MEGA6, molecular evolutionary genetics analysis version 6.0
    • Tamura, K., Stecher, G., Peterson, D., Filipski, A., and Kumar, S. (2013). MEGA6, molecular evolutionary genetics analysis version 6.0. Mol. Biol. Evol. 30, 2725-2729. doi: 10.1093/molbev/mst197
    • (2013) Mol. Biol. Evol , vol.30 , pp. 2725-2729
    • Tamura, K.1    Stecher, G.2    Peterson, D.3    Filipski, A.4    Kumar, S.5
  • 34
    • 34848815991 scopus 로고    scopus 로고
    • Functional characterization of AP3, SOC1 and WUS homologues from citrus (Citrus sinensis)
    • Tan, F. C., and Swain, S. M. (2007). Functional characterization of AP3, SOC1 and WUS homologues from citrus (Citrus sinensis). Physiol. Plant. 131, 481-495. doi: 10.1111/j.1399-3054.2007.00971.x
    • (2007) Plant , vol.131 , pp. 481-495
    • Tan, F.C.1    Swain, S.M.2
  • 35
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22,4673-4680. doi: 10.1093/nar/22.22.4673
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 36
    • 0037329943 scopus 로고    scopus 로고
    • The roles of auxin response factor domains in auxin-responsive transcription
    • Tiwari, S. B., Hagen, G., and Guilfoyle, T. (2003). The roles of auxin response factor domains in auxin-responsive transcription. Plant Cell 15, 533-543. doi: 10.1105/tpc.008417
    • (2003) Plant Cell , vol.15 , pp. 533-543
    • Tiwari, S.B.1    Hagen, G.2    Guilfoyle, T.3
  • 37
    • 0035542787 scopus 로고    scopus 로고
    • AUX/IAA proteins are active repressors, and their stability and activity are modulated by auxin
    • Tiwari, S. B., Wang, X.-J., Hagen, G., and Guilfoyle, T. J. (2001). AUX/IAA proteins are active repressors, and their stability and activity are modulated by auxin. Plant Cell 13, 2809-2822. doi: 10.1105/tpc.13.12.2809
    • (2001) Plant Cell , vol.13 , pp. 2809-2822
    • Tiwari, S.B.1    Wang, X.-J.2    Hagen, G.3    Guilfoyle, T.J.4
  • 38
    • 0030796237 scopus 로고    scopus 로고
    • ARF1, a transcription factor thatbinds to auxin response elements
    • Ulmasov, T., Hagen, G., and Guilfoyle, T. J. (1997). ARF1, a transcription factor thatbinds to auxin response elements. Science 276,1865-1868. doi: 10.1126/sci-ence.276.5320.1865
    • (1997) Science , vol.276 , pp. 1865-1868
    • Ulmasov, T.1    Hagen, G.2    Guilfoyle, T.J.3
  • 39
    • 0033545881 scopus 로고    scopus 로고
    • Activation and repression of transcription by auxin-response factors
    • Ulmasov, T., Hagen, G., and Guilfoyle, T. J. (1999). Activation and repression of transcription by auxin-response factors. Proc. Natl. Acad. Sci. 96, 5844-5849. doi: 10.1073/pnas.96.10.5844
    • (1999) Proc. Natl. Acad. Sci , vol.96 , pp. 5844-5849
    • Ulmasov, T.1    Hagen, G.2    Guilfoyle, T.J.3
  • 40
    • 0033180359 scopus 로고    scopus 로고
    • Dimerization and DNA binding of auxin response factors
    • Ulmasov, T., Hagen, G., and Guilfoyle, T. J. (1999). Dimerization and DNA binding of auxin response factors. Plant J. 19, 309-319. doi: 10.1046/j.1365-313X.1999.00538.x
    • (1999) Plant J , vol.19 , pp. 309-319
    • Ulmasov, T.1    Hagen, G.2    Guilfoyle, T.J.3
  • 41
    • 34247102281 scopus 로고    scopus 로고
    • Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa)
    • Wang, D., Pei, K., Fu, Y., Sun, Z., Li, S., Liu, H., et al. (2007). Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa). Gene 394, 13-24. doi: 10.1016/j.gene.2007.01.006
    • (2007) Gene , vol.394 , pp. 13-24
    • Wang, D.1    Pei, K.2    Fu, Y.3    Sun, Z.4    Li, S.5    Liu, H.6
  • 42
    • 30344461068 scopus 로고    scopus 로고
    • AUXIN RESPONSE FACTOR7 restores the expression of auxin-responsive genes in mutant Arabidopsis leaf mesophyll protoplasts
    • Wang, S., Tiwari, S. B., Hagen, G., and Guilfoyle, T. J. (2005). AUXIN RESPONSE FACTOR7 restores the expression of auxin-responsive genes in mutant Arabidopsis leaf mesophyll protoplasts. Plant Cell 17, 1979-1993. doi: 10.1105/tpc.105.031096
    • (2005) Plant Cell , vol.17 , pp. 1979-1993
    • Wang, S.1    Tiwari, S.B.2    Hagen, G.3    Guilfoyle, T.J.4
  • 43
    • 19544366287 scopus 로고    scopus 로고
    • Auxin: Regulation, action, and interaction
    • Woodward, A. W., and Bartel, B. (2005). Auxin: Regulation, action, and interaction. Ann. Bot. 95, 707-735. doi: 10.1093/aob/mci083
    • (2005) Ann. Bot , vol.95 , pp. 707-735
    • Woodward, A.W.1    Bartel, B.2
  • 44
    • 80053933347 scopus 로고    scopus 로고
    • Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum
    • Wu, J., Wang, F., Cheng, L., Kong, F., Peng, Z., Liu, S., et al. (2011). Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. Plant Cell Rep. 30, 2059-2073. doi: 10.1007/s00299-011-1113-z
    • (2011) Plant Cell Rep , vol.30 , pp. 2059-2073
    • Wu, J.1    Wang, F.2    Cheng, L.3    Kong, F.4    Peng, Z.5    Liu, S.6
  • 45
    • 79953725148 scopus 로고    scopus 로고
    • Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize
    • Xing, H., Pudake, R., Guo, G., Xing, G., Hu, Z., Zhang, Y., et al. (2011). Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize. BMC Genomics 12:178. doi: 10.1186/1471-216412-178
    • (2011) BMC Genomics , vol.12
    • Xing, H.1    Pudake, R.2    Guo, G.3    Xing, G.4    Hu, Z.5    Zhang, Y.6
  • 46
    • 84871962223 scopus 로고    scopus 로고
    • The draft genome of sweet orange (Citrus sinensis). Nat
    • Xu, Q., Chen, L.-L., Ruan, X., Chen, D., Zhu, A., Chen, C., et al. (2013). The draft genome of sweet orange (Citrus sinensis). Nat. Genet. 45, 59-66. doi: 10.1038/ng.2472
    • (2013) Genet , vol.45 , pp. 59-66
    • Xu, Q.1    Chen, L.-L.2    Ruan, X.3    Chen, D.4    Zhu, A.5    Chen, C.6
  • 47
    • 33746218840 scopus 로고    scopus 로고
    • Prediction of protein subcellular localization
    • Yu, C.-S., Chen, Y.-C., Lu, C.-H., and Hwang, J.-K. (2006). Prediction of protein subcellular localization. Proteins 64, 643-651. doi: 10.1002/prot.21018
    • (2006) Proteins , vol.64 , pp. 643-651
    • Yu, C.-S.1    Chen, Y.-C.2    Lu, C.-H.3    Hwang, J.-K.4
  • 48
    • 54949153443 scopus 로고    scopus 로고
    • Identification of early-flower-related ESTs in an early-flowering mutant of trifoliate orange (Poncirus trifoliata) by suppression subtractive hybridization and macroarray analysis
    • Zhang, J.-Z., Li, Z.-M., Liu, L., Mei, L., Yao, J.-L., and Hu, C.-G. (2008). Identification of early-flower-related ESTs in an early-flowering mutant of trifoliate orange (Poncirus trifoliata) by suppression subtractive hybridization and macroarray analysis. Tree Physiol. 28, 1449-1457. doi: 10.1093/treep-hys/28.10.1449
    • (2008) Tree Physiol , vol.28 , pp. 1449-1457
    • Zhang, J.-Z.1    Li, Z.-M.2    Liu, L.3    Mei, L.4    Yao, J.-L.5    Hu, C.-G.6
  • 49
    • 79954420388 scopus 로고    scopus 로고
    • Whole- genome survey and characterization of MADS-box gene family in maize and sorghum
    • Zhao, Y., Li, X., Chen, W., Peng, X., Cheng, X., Zhu, S., et al. (2011). Whole- genome survey and characterization of MADS-box gene family in maize and sorghum. Plant Cell Tissue Organ Cult. 105, 159-173. doi: 10.1007/s11240-010-9848-8
    • (2011) Plant Cell Tissue Organ Cult , vol.105 , pp. 159-173
    • Zhao, Y.1    Li, X.2    Chen, W.3    Peng, X.4    Cheng, X.5    Zhu, S.6
  • 50
    • 84897477883 scopus 로고    scopus 로고
    • Characterization of the tomato ARF gene family uncovers a multilevels post-transcriptional regulation including alternative splicing
    • Zouine, M., Fu, Y., Chateigner-Boutin, A.-L., Mila, I., Frasse, P., Wang, H., et al. (2014). Characterization of the tomato ARF gene family uncovers a multilevels post-transcriptional regulation including alternative splicing. PLoS ONE 9:e84203. doi: 10.1371/journal.pone.0084203
    • (2014) Plos ONE , vol.9
    • Zouine, M.1    Fu, Y.2    Chateigner-Boutin, A.-L.3    Mila, I.4    Frasse, P.5    Wang, H.6


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