-
1
-
-
0030140041
-
Early genes and auxin action
-
Abel S., and Theologis A. Early genes and auxin action. Plant Physiol. 111 (1996) 9-17
-
(1996)
Plant Physiol.
, vol.111
, pp. 9-17
-
-
Abel, S.1
Theologis, A.2
-
2
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408 (2000) 796-815
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
Arabidopsis Genome Initiative1
-
3
-
-
0003570456
-
-
Kluwer, Dordrecht, The Netherlands
-
Davies P.J. Plant Hormones, Physiology, Biochemistry and Molecular Biology. 2nd ed. (1995), Kluwer, Dordrecht, The Netherlands
-
(1995)
Plant Hormones, Physiology, Biochemistry and Molecular Biology. 2nd ed.
-
-
Davies, P.J.1
-
4
-
-
27744526218
-
AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana
-
Ellis C.M., Nagpal P., Young J.C., Hagen G., Guilfoyle T.J., and Reed J.W. AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana. Development 132 (2005) 4563-4574
-
(2005)
Development
, vol.132
, pp. 4563-4574
-
-
Ellis, C.M.1
Nagpal, P.2
Young, J.C.3
Hagen, G.4
Guilfoyle, T.J.5
Reed, J.W.6
-
5
-
-
0037153127
-
Sequence and analysis of rice chromosome 4
-
Feng Q., et al. Sequence and analysis of rice chromosome 4. Nature 420 (2002) 316-320
-
(2002)
Nature
, vol.420
, pp. 316-320
-
-
Feng, Q.1
-
6
-
-
0037023349
-
A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
-
Goff S.A., et al. A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science 296 (2002) 92-100
-
(2002)
Science
, vol.296
, pp. 92-100
-
-
Goff, S.A.1
-
7
-
-
0035999463
-
Auxin-responsive gene expression: genes, promoters and regulatory factors
-
Hagen G., and Guilfoyle T. Auxin-responsive gene expression: genes, promoters and regulatory factors. Plant Mol. Biol. 49 (2002) 373-385
-
(2002)
Plant Mol. Biol.
, vol.49
, pp. 373-385
-
-
Hagen, G.1
Guilfoyle, T.2
-
8
-
-
0026230436
-
Auxin-induced expression of the soybean GH3 promoter in transgenic tobacco plants
-
Hagen G., Martin G., Li Y., and Guilfoyle T.J. Auxin-induced expression of the soybean GH3 promoter in transgenic tobacco plants. Plant Mol. Biol. 17 (1991) 567-579
-
(1991)
Plant Mol. Biol.
, vol.17
, pp. 567-579
-
-
Hagen, G.1
Martin, G.2
Li, Y.3
Guilfoyle, T.J.4
-
9
-
-
0032473570
-
The Arabidopsis gene MONOPTEROUS encodes a transcription factor mediating embryo axis formation and vascular development
-
Hardtke C.S., and Berleth T. The Arabidopsis gene MONOPTEROUS encodes a transcription factor mediating embryo axis formation and vascular development. EMBO J. 17 (1998) 1405-1411
-
(1998)
EMBO J.
, vol.17
, pp. 1405-1411
-
-
Hardtke, C.S.1
Berleth, T.2
-
10
-
-
0034078213
-
The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissue
-
Harper R.M., et al. The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissue. Plant Cell 12 (2000) 757-770
-
(2000)
Plant Cell
, vol.12
, pp. 757-770
-
-
Harper, R.M.1
-
11
-
-
0035180589
-
The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant
-
Huala E., et al. The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant. Nucleic Acids Res. 29 (2001) 102-105
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 102-105
-
-
Huala, E.1
-
13
-
-
29544446926
-
Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa)
-
Jain M., Kaur N., Garg R., Thakur J.K., Tyagi A.K., and Khurana J.P. Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa). Funct. Integr. Genomics 6 (2006) 47-59
-
(2006)
Funct. Integr. Genomics
, vol.6
, pp. 47-59
-
-
Jain, M.1
Kaur, N.2
Garg, R.3
Thakur, J.K.4
Tyagi, A.K.5
Khurana, J.P.6
-
15
-
-
33748776573
-
Genome-wide analysis, evolutionary expansion, and expression of early auxin-responsive SAUR gene family in rice (Oryza sativa)
-
Jain M., Tyagi A.K., and Khurana J.P. Genome-wide analysis, evolutionary expansion, and expression of early auxin-responsive SAUR gene family in rice (Oryza sativa). Genomics 88 (2006) 360-371
-
(2006)
Genomics
, vol.88
, pp. 360-371
-
-
Jain, M.1
Tyagi, A.K.2
Khurana, J.P.3
-
16
-
-
0037624063
-
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice
-
Kikuchi S., et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science 301 (2003) 376-379
-
(2003)
Science
, vol.301
, pp. 376-379
-
-
Kikuchi, S.1
-
18
-
-
3242810318
-
MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar S., Tamura K., and Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5 (2004) 150-163
-
(2004)
Brief. Bioinform.
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
19
-
-
0028500840
-
An auxin-inducible element in soybean SAUR promoters
-
Li Y., Liu Z.B., Shi X., Hagen G., and Guilfoyle T.J. An auxin-inducible element in soybean SAUR promoters. Plant Physiol. 106 (1994) 37-43
-
(1994)
Plant Physiol.
, vol.106
, pp. 37-43
-
-
Li, Y.1
Liu, Z.B.2
Shi, X.3
Hagen, G.4
Guilfoyle, T.J.5
-
20
-
-
4344648019
-
Convergence of signaling pathways in the control of differential cell growth in Arabidopsis
-
Li H., Johnson P., Stepanova A., Alonso J.M., and Ecker J.R. Convergence of signaling pathways in the control of differential cell growth in Arabidopsis. Dev. Cell 7 (2004) 1-20
-
(2004)
Dev. Cell
, vol.7
, pp. 1-20
-
-
Li, H.1
Johnson, P.2
Stepanova, A.3
Alonso, J.M.4
Ecker, J.R.5
-
21
-
-
0035999460
-
Genetics of Aux/IAA and ARF action in plant growth and development
-
Liscum E., and Reed J.W. Genetics of Aux/IAA and ARF action in plant growth and development. Plant Mol. Biol. 49 (2002) 387-400
-
(2002)
Plant Mol. Biol.
, vol.49
, pp. 387-400
-
-
Liscum, E.1
Reed, J.W.2
-
22
-
-
0028425477
-
Soybean GH3 promoter contains multiple auxin-inducible elements
-
Liu Z.B., Ulmasov T., Shi X., Hagen G., and Guilfoyle T.J. Soybean GH3 promoter contains multiple auxin-inducible elements. Plant Cell 6 (1994) 645-657
-
(1994)
Plant Cell
, vol.6
, pp. 645-657
-
-
Liu, Z.B.1
Ulmasov, T.2
Shi, X.3
Hagen, G.4
Guilfoyle, T.J.5
-
23
-
-
0034634395
-
The evolutionary fate and consequences of duplicate genes
-
Lynch M., and Conery J.S. The evolutionary fate and consequences of duplicate genes. Science 290 (2000) 1151-1155
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
Conery, J.S.2
-
24
-
-
0041419305
-
Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome
-
Miyao A., et al. Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome. Plant Cell 15 (2003) 1771-1780
-
(2003)
Plant Cell
, vol.15
, pp. 1771-1780
-
-
Miyao, A.1
-
25
-
-
27144474564
-
Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation
-
Nagpal P., et al. Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation. Development 132 (2005) 4107-4118
-
(2005)
Development
, vol.132
, pp. 4107-4118
-
-
Nagpal, P.1
-
26
-
-
33646832415
-
Genome-wide analysis of the ERF gene family in Arabidopsis and rice
-
Nakano T., Suzuki K., Fujimura T., and Shinshi H. Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 140 (2006) 411-432
-
(2006)
Plant Physiol.
, vol.140
, pp. 411-432
-
-
Nakano, T.1
Suzuki, K.2
Fujimura, T.3
Shinshi, H.4
-
27
-
-
0033792717
-
Auxin and ETTIN in Arabidopsis gynoecium morphogenesis
-
Nemhauser J.L., Feldman L.J., and Zambryski P.C. Auxin and ETTIN in Arabidopsis gynoecium morphogenesis. Development 127 (2000) 3877-3888
-
(2000)
Development
, vol.127
, pp. 3877-3888
-
-
Nemhauser, J.L.1
Feldman, L.J.2
Zambryski, P.C.3
-
28
-
-
20044394137
-
Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19
-
Okushima Y., et al. Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19. Plant Cell 17 (2005) 444-463
-
(2005)
Plant Cell
, vol.17
, pp. 444-463
-
-
Okushima, Y.1
-
29
-
-
0035027756
-
IAA17/AXR3: biochemical insight into an auxin mutant phenotype
-
Ouellet F., Overvoorde P.J., and Theologis A. IAA17/AXR3: biochemical insight into an auxin mutant phenotype. Plant Cell 13 (2001) 829-841
-
(2001)
Plant Cell
, vol.13
, pp. 829-841
-
-
Ouellet, F.1
Overvoorde, P.J.2
Theologis, A.3
-
30
-
-
33644823601
-
Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana
-
Overvoorde P.J. Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana. Plant Cell 17 (2005) 3282-2300
-
(2005)
Plant Cell
, vol.17
, pp. 3282-2300
-
-
Overvoorde, P.J.1
-
31
-
-
3042836334
-
Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics
-
Paterson A.H., Bowers J.E., and Chapman B.A. Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 9903-9908
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 9903-9908
-
-
Paterson, A.H.1
Bowers, J.E.2
Chapman, B.A.3
-
32
-
-
0037266832
-
Investigating ancient duplication events in the Arabidopsis genome
-
Raes J., Vandepoele K., Simillion C., Saeys Y., and Van de Peer Y. Investigating ancient duplication events in the Arabidopsis genome. J. Struct. Funct. Genomics 3 (2003) 117-129
-
(2003)
J. Struct. Funct. Genomics
, vol.3
, pp. 117-129
-
-
Raes, J.1
Vandepoele, K.2
Simillion, C.3
Saeys, Y.4
Van de Peer, Y.5
-
33
-
-
0035209617
-
Roles and activities of Aux/IAA proteins in Arabidopsis
-
Reed J.W. Roles and activities of Aux/IAA proteins in Arabidopsis. Trends Plant Sci. 6 (2001) 420-425
-
(2001)
Trends Plant Sci.
, vol.6
, pp. 420-425
-
-
Reed, J.W.1
-
34
-
-
3543024524
-
Contrasting modes of diversification in the Aux/IAA and ARF gene families
-
Remington D.L., Visionm T.J., Guilfoylem T.J., and Reedm J.W. Contrasting modes of diversification in the Aux/IAA and ARF gene families. Plant Physiol. 135 (2004) 1738-1752
-
(2004)
Plant Physiol.
, vol.135
, pp. 1738-1752
-
-
Remington, D.L.1
Visionm, T.J.2
Guilfoylem, T.J.3
Reedm, J.W.4
-
35
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
36
-
-
0037153190
-
The genome sequence and structure of rice chromosome 1
-
Sasaki T., et al. The genome sequence and structure of rice chromosome 1. Nature 420 (2002) 312-316
-
(2002)
Nature
, vol.420
, pp. 312-316
-
-
Sasaki, T.1
-
37
-
-
0035723336
-
Auxin response factor family in rice
-
Sato Y., Nishimura A., Ito M., Ashikari M., Hirano H.Y., and Matsuoka M. Auxin response factor family in rice. Genes Genet. Syst. 76 (2001) 373-380
-
(2001)
Genes Genet. Syst.
, vol.76
, pp. 373-380
-
-
Sato, Y.1
Nishimura, A.2
Ito, M.3
Ashikari, M.4
Hirano, H.Y.5
Matsuoka, M.6
-
38
-
-
0030660640
-
ETTIN patterns the Arabidopsis floral meristem and reproductive organs
-
Sessions A., Nemhauser J.L., McColl A., Roe J.L., Feldmann K.A., and Zambryski P.C. ETTIN patterns the Arabidopsis floral meristem and reproductive organs. Development 124 (1997) 4481-4491
-
(1997)
Development
, vol.124
, pp. 4481-4491
-
-
Sessions, A.1
Nemhauser, J.L.2
McColl, A.3
Roe, J.L.4
Feldmann, K.A.5
Zambryski, P.C.6
-
39
-
-
0037109058
-
The hidden duplication past of Arabidopsis thaliana
-
Simillion C., Vandepoele K., Van Montagu M.C., Zabeau M., and Van De Peer Y. The hidden duplication past of Arabidopsis thaliana. Proc. Natl. Acad. Sci. U. S. A. 99 (2002) 13627-13632
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 13627-13632
-
-
Simillion, C.1
Vandepoele, K.2
Van Montagu, M.C.3
Zabeau, M.4
Van De Peer, Y.5
-
40
-
-
0032253807
-
NPH4, a conditional modulator of auxin-dependent differential growth responses in Arabidopsis
-
Stowe-Evans E.L., Harper R.M., Motchoulski A.V., and Liscum E. NPH4, a conditional modulator of auxin-dependent differential growth responses in Arabidopsis. Plant Physiol. 118 (1998) 1265-1275
-
(1998)
Plant Physiol.
, vol.118
, pp. 1265-1275
-
-
Stowe-Evans, E.L.1
Harper, R.M.2
Motchoulski, A.V.3
Liscum, E.4
-
41
-
-
33645792167
-
The GH3 family in plants: genome wide analysis in rice and evolutionary history based on EST analysis
-
Terol J., Domingo C., and Talon M. The GH3 family in plants: genome wide analysis in rice and evolutionary history based on EST analysis. Gene 371 (2006) 279-290
-
(2006)
Gene
, vol.371
, pp. 279-290
-
-
Terol, J.1
Domingo, C.2
Talon, M.3
-
42
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 (1997) 4876-4882
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
43
-
-
7044228135
-
Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition
-
Tian C., et al. Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition. Plant J. 40 (2004) 333-343
-
(2004)
Plant J.
, vol.40
, pp. 333-343
-
-
Tian, C.1
-
44
-
-
0037329943
-
The roles of auxin response factor domains in auxin-responsive transcription
-
Tiwari S.B., Hagen G., and Guilfoyle T.J. The roles of auxin response factor domains in auxin-responsive transcription. Plant Cell 15 (2003) 533-543
-
(2003)
Plant Cell
, vol.15
, pp. 533-543
-
-
Tiwari, S.B.1
Hagen, G.2
Guilfoyle, T.J.3
-
46
-
-
0030796237
-
ARF1, a transcription factor that binds to auxin response elements
-
Ulmasov T., Hagen G., and Guilfoyle T.J. ARF1, a transcription factor that binds to auxin response elements. Science 276 (1997) 1865-1868
-
(1997)
Science
, vol.276
, pp. 1865-1868
-
-
Ulmasov, T.1
Hagen, G.2
Guilfoyle, T.J.3
-
47
-
-
0031277708
-
Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements
-
Ulmasov T., Murfett J., Hagen G., and Guilfoyle T.J. Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements. Plant Cell 9 (1997) 1963-1971
-
(1997)
Plant Cell
, vol.9
, pp. 1963-1971
-
-
Ulmasov, T.1
Murfett, J.2
Hagen, G.3
Guilfoyle, T.J.4
-
48
-
-
0033180359
-
Dimerization and DNA binding of auxin response factors
-
Ulmasov T., Hagen G., and Guilfoyle T.J. Dimerization and DNA binding of auxin response factors. Plant J. 19 (1999) 309-319
-
(1999)
Plant J.
, vol.19
, pp. 309-319
-
-
Ulmasov, T.1
Hagen, G.2
Guilfoyle, T.J.3
-
49
-
-
0033545881
-
Activation and repression of transcription by auxin-response factors
-
Ulmasov T., Hagen G., and Guilfoyle T.J. Activation and repression of transcription by auxin-response factors. Proc. Natl. Acad. Sci. U. S. A. 96 (1999) 5844-5849
-
(1999)
Proc. Natl. Acad. Sci. U. S. A.
, vol.96
, pp. 5844-5849
-
-
Ulmasov, T.1
Hagen, G.2
Guilfoyle, T.J.3
-
50
-
-
0036792375
-
OsARF1, an auxin response factor from rice, is auxin-regulated and classifies as a primary auxin responsive gene
-
Waller F., Furuya M., and Nick P. OsARF1, an auxin response factor from rice, is auxin-regulated and classifies as a primary auxin responsive gene. Plant Mol. Biol. 50 (2002) 415-425
-
(2002)
Plant Mol. Biol.
, vol.50
, pp. 415-425
-
-
Waller, F.1
Furuya, M.2
Nick, P.3
-
51
-
-
14244250895
-
Duplication and DNA segmental loss in the rice genome: implications for diploidization
-
Wang X., Shi X., Hao B., Ge S., and Luo J. Duplication and DNA segmental loss in the rice genome: implications for diploidization. New Phytol. 165 (2005) 937-946
-
(2005)
New Phytol.
, vol.165
, pp. 937-946
-
-
Wang, X.1
Shi, X.2
Hao, B.3
Ge, S.4
Luo, J.5
-
52
-
-
0031251762
-
The massugu1 mutation of Arabidopsis identified with failure of auxin-induced growth curvature of hypocotyl confers auxin insensitivity to hypocotyl and leaf
-
Watahiki M.K., and Yamamoto K.T. The massugu1 mutation of Arabidopsis identified with failure of auxin-induced growth curvature of hypocotyl confers auxin insensitivity to hypocotyl and leaf. Plant Physiol. 115 (1997) 419-426
-
(1997)
Plant Physiol.
, vol.115
, pp. 419-426
-
-
Watahiki, M.K.1
Yamamoto, K.T.2
-
53
-
-
22044436100
-
NPH4/ARF7 and ARF19 promote leaf expansion and auxin-induced lateral root formation
-
Wilmoth J.C. NPH4/ARF7 and ARF19 promote leaf expansion and auxin-induced lateral root formation. Plant J. 43 (2005) 118-130
-
(2005)
Plant J.
, vol.43
, pp. 118-130
-
-
Wilmoth, J.C.1
-
54
-
-
0037023384
-
A draft sequence of the rice genome (Oryza sativa L. ssp. indica)
-
Yu J., et al. A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science 296 (2002) 79-92
-
(2002)
Science
, vol.296
, pp. 79-92
-
-
Yu, J.1
-
55
-
-
20144366003
-
The genomes of Oryza sativa: a history of duplications
-
Yu J., et al. The genomes of Oryza sativa: a history of duplications. PLoS Biol. 3e (2005) 38
-
(2005)
PLoS Biol.
, vol.3 e
, pp. 38
-
-
Yu, J.1
|