메뉴 건너뛰기
Infection and Immunity
Volumn 83, Issue 4, 2015, Pages 1384-1395
Evolutionary adaptation of an AraC-like regulatory protein in Citrobacter rodentium and Escherichia species
Author keywords

[No Author keywords available]
Indexed keywords

BACTERIAL PROTEIN; BACTERIAL RNA; REGA REGULATORY PROTEIN; UNCLASSIFIED DRUG; ARAC PROTEIN; ARAC PROTEIN, E COLI; ESCHERICHIA COLI PROTEIN; GRLR PROTEIN, E COLI; LEE PROTEIN, E COLI; PHOSPHOPROTEIN; REGA PROTEIN, BACTERIA; REPRESSOR PROTEIN; VIRULENCE FACTOR;
EID: 84925372828     PISSN: 00199567     EISSN: 10985522     Source Type: Journal    
DOI: 10.1128/IAI.02697-14     Document Type: Article
Times cited : (10)
References (91)
  • 1
    • 2942689400 scopus 로고    scopus 로고
    • Shaping bacterial genomes with integrative and conjugative elements
    • Burrus V, Waldor MK. 2004. Shaping bacterial genomes with integrative and conjugative elements. Res Microbiol 155:376-386. http://dx.doi.org/10.1016/j.resmic.2004.01.012.
    • (2004) Res Microbiol , vol.155 , pp. 376-386
    • Burrus, V.1    Waldor, M.K.2
  • 3
    • 2442449227 scopus 로고    scopus 로고
    • Genomic islands in pathogenic and environmental microorganisms
    • Dobrindt U, Hochhut B, Hentschel U, Hacker J. 2004. Genomic islands in pathogenic and environmental microorganisms. Nat Rev Microbiol 2:414-424. http://dx.doi.org/10.1038/nrmicro884.
    • (2004) Nat Rev Microbiol , vol.2 , pp. 414-424
    • Dobrindt, U.1    Hochhut, B.2    Hentschel, U.3    Hacker, J.4
  • 4
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman H, Lawrence JG, Groisman EA. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405:299-304. http://dx.doi.org/10.1038/35012500.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 6
    • 0030606233 scopus 로고    scopus 로고
    • Pathogenicity islands: bacterial evolution in quantum leaps
    • Groisman EA, Ochman H. 1996. Pathogenicity islands: bacterial evolution in quantum leaps. Cell 87:791-794. http://dx.doi.org/10.1016/S0092-8674(00)81985-6.
    • (1996) Cell , vol.87 , pp. 791-794
    • Groisman, E.A.1    Ochman, H.2
  • 7
    • 0033758756 scopus 로고    scopus 로고
    • Pathogenicity islands and the evolution of microbes
    • Hacker J, Kaper JB. 2000. Pathogenicity islands and the evolution of microbes. Annu Rev Microbiol 54:641-679. http://dx.doi.org/10.1146/annurev.micro.54.1.641.
    • (2000) Annu Rev Microbiol , vol.54 , pp. 641-679
    • Hacker, J.1    Kaper, J.B.2
  • 8
    • 80053921532 scopus 로고    scopus 로고
    • The influence of the accessory genome on bacterial pathogen evolution
    • Jackson RW, Vinatzer B, Arnold DL, Dorus S, Murillo J. 2011. The influence of the accessory genome on bacterial pathogen evolution. Mob Genet Elements 1:55-65. http://dx.doi.org/10.4161/mge.1.1.16432.
    • (2011) Mob Genet Elements , vol.1 , pp. 55-65
    • Jackson, R.W.1    Vinatzer, B.2    Arnold, D.L.3    Dorus, S.4    Murillo, J.5
  • 9
    • 78650612438 scopus 로고    scopus 로고
    • Bacterial pathogen evolution: breaking news
    • Jackson RW, Johnson LJ, Clarke SR, Arnold DL. 2011. Bacterial pathogen evolution: breaking news. Trends Genet 27:32-40. http://dx.doi.org/10.1016/j.tig.2010.10.001.
    • (2011) Trends Genet , vol.27 , pp. 32-40
    • Jackson, R.W.1    Johnson, L.J.2    Clarke, S.R.3    Arnold, D.L.4
  • 10
    • 1342292545 scopus 로고    scopus 로고
    • The Yersiniae-a model genus to study the rapid evolution of bacterial pathogens
    • Wren BW. 2003. The Yersiniae-a model genus to study the rapid evolution of bacterial pathogens. Nat Rev Microbiol 1:55-64. http://dx.doi.org/10.1038/nrmicro730.
    • (2003) Nat Rev Microbiol , vol.1 , pp. 55-64
    • Wren, B.W.1
  • 15
    • 0034823881 scopus 로고    scopus 로고
    • Locus of enterocyte effacement from Citrobacter rodentium: sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens
    • Deng W, Li Y, Vallance BA, Finlay BB. 2001. Locus of enterocyte effacement from Citrobacter rodentium: sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens. Infect Immun 69:6323-6335. http://dx.doi.org/10.1128/IAI.69.10.6323-6335.2001.
    • (2001) Infect Immun , vol.69 , pp. 6323-6335
    • Deng, W.1    Li, Y.2    Vallance, B.A.3    Finlay, B.B.4
  • 16
    • 4644315305 scopus 로고    scopus 로고
    • Impact of the locus of enterocyte effacement pathogenicity island on the evolution of pathogenic Escherichia coli
    • Jores J, Rumer L, Wieler LH. 2004. Impact of the locus of enterocyte effacement pathogenicity island on the evolution of pathogenic Escherichia coli. Int J Med Microbiol 294:103-113. http://dx.doi.org/10.1016/j.ijmm.2004.06.024.
    • (2004) Int J Med Microbiol , vol.294 , pp. 103-113
    • Jores, J.1    Rumer, L.2    Wieler, L.H.3
  • 18
    • 79951493901 scopus 로고    scopus 로고
    • LEEways: tales of EPEC, ATEC and EHEC
    • Schmidt MA. 2010. LEEways: tales of EPEC, ATEC and EHEC. Cell Microbiol 12:1544-1552. http://dx.doi.org/10.1111/j.1462-5822.2010.01518.x.
    • (2010) Cell Microbiol , vol.12 , pp. 1544-1552
    • Schmidt, M.A.1
  • 19
    • 11844292055 scopus 로고    scopus 로고
    • Evolutionary genetics of a new pathogenic Escherichia species: Escherichia albertii and related Shigella boydii strains
    • Hyma KE, Lacher DW, Nelson AM, Bumbaugh AC, Janda JM, Strockbine NA, Young VB, Whittam TS. 2005. Evolutionary genetics of a new pathogenic Escherichia species: Escherichia albertii and related Shigella boydii strains. J Bacteriol 187:619-628. http://dx.doi.org/10.1128/JB.187.2.619-628.2005.
    • (2005) J Bacteriol , vol.187 , pp. 619-628
    • Hyma, K.E.1    Lacher, D.W.2    Nelson, A.M.3    Bumbaugh, A.C.4    Janda, J.M.5    Strockbine, N.A.6    Young, V.B.7    Whittam, T.S.8
  • 20
    • 84864471318 scopus 로고    scopus 로고
    • A genomic island in Salmonella enterica ssp. salamae provides new insights on the genealogy of the locus of enterocyte effacement
    • Chandry PS, Gladman S, Moore SC, Seemann T, Crandall KA, Fegan N. 2012. A genomic island in Salmonella enterica ssp. salamae provides new insights on the genealogy of the locus of enterocyte effacement. PLoS One 7:e41615. http://dx.doi.org/10.1371/journal.pone.0041615.
    • (2012) PLoS One , vol.7
    • Chandry, P.S.1    Gladman, S.2    Moore, S.C.3    Seemann, T.4    Crandall, K.A.5    Fegan, N.6
  • 21
    • 0030482345 scopus 로고    scopus 로고
    • Transfer of attaching and effacing capacity from a strain of enteropathogenic Escherichia coli to E. coli K-12
    • O'Gorman LE, Krejany EO, Bennett-Wood VR, Robins-Browne RM. 1996. Transfer of attaching and effacing capacity from a strain of enteropathogenic Escherichia coli to E. coli K-12. Microbiol Res 151:379-385. http://dx.doi.org/10.1016/S0944-5013(96)80007-3.
    • (1996) Microbiol Res , vol.151 , pp. 379-385
    • O'Gorman, L.E.1    Krejany, E.O.2    Bennett-Wood, V.R.3    Robins-Browne, R.M.4
  • 22
    • 0032783034 scopus 로고    scopus 로고
    • The cloned locus of enterocyte effacement from enterohemorrhagic Escherichia coli O157:H7 is unable to confer the attaching and effacing phenotype upon E. coli K-12
    • Elliott SJ, Yu J, Kaper JB. 1999. The cloned locus of enterocyte effacement from enterohemorrhagic Escherichia coli O157:H7 is unable to confer the attaching and effacing phenotype upon E. coli K-12. Infect Immun 67:4260-4263.
    • (1999) Infect Immun , vol.67 , pp. 4260-4263
    • Elliott, S.J.1    Yu, J.2    Kaper, J.B.3
  • 23
    • 33747844551 scopus 로고    scopus 로고
    • Emerging enterohaemorrhagic Escherichia coli: causes and effects of the rise of a human pathogen
    • Beutin L. 2006. Emerging enterohaemorrhagic Escherichia coli: causes and effects of the rise of a human pathogen. J Vet Med B Infect Dis Vet Public Health 53:299-305. http://dx.doi.org/10.1111/j.1439-0450.2006.00968.x.
    • (2006) J Vet Med B Infect Dis Vet Public Health , vol.53 , pp. 299-305
    • Beutin, L.1
  • 24
    • 79953685920 scopus 로고    scopus 로고
    • Escherichia coli O157:H7: animal reservoir and sources of human infection
    • Ferens WA, Hovde CJ. 2011. Escherichia coli O157:H7: animal reservoir and sources of human infection. Foodborne Pathog Dis 8:465-487. http://dx.doi.org/10.1089/fpd.2010.0673.
    • (2011) Foodborne Pathog Dis , vol.8 , pp. 465-487
    • Ferens, W.A.1    Hovde, C.J.2
  • 26
    • 84866478429 scopus 로고    scopus 로고
    • Prevalence and characteristics of intimin-producing Escherichia coli strains isolated from healthy chickens in Korea
    • Oh J-Y, Kang M-S, An B-K, Shin E-G, Kim M-J, Kim Y-J, Kwon Y-K. 2012. Prevalence and characteristics of intimin-producing Escherichia coli strains isolated from healthy chickens in Korea. Poult Sci 91:2438-2443. http://dx.doi.org/10.3382/ps.2012-02301.
    • (2012) Poult Sci , vol.91 , pp. 2438-2443
    • Oh, J.-Y.1    Kang, M.-S.2    An, B.-K.3    Shin, E.-G.4    Kim, M.-J.5    Kim, Y.-J.6    Kwon, Y.-K.7
  • 27
    • 28044448059 scopus 로고    scopus 로고
    • A positive regulatory loop controls expression of the locus of enterocyte effacement-encoded regulators Ler and GrlA
    • Barba J, Bustamante VH, Flores-Valdez MA, Deng W, Finlay BB, Puente JL. 2005.Apositive regulatory loop controls expression of the locus of enterocyte effacement-encoded regulators Ler and GrlA. J Bacteriol 187:7918-7930. http://dx.doi.org/10.1128/JB.187.23.7918-7930.2005.
    • (2005) J Bacteriol , vol.187 , pp. 7918-7930
    • Barba, J.1    Bustamante, V.H.2    Flores-Valdez, M.A.3    Deng, W.4    Finlay, B.B.5    Puente, J.L.6
  • 30
    • 0037406928 scopus 로고    scopus 로고
    • Identification of the DNA binding sites of PerA, the transcriptional activator of the bfp and per operons in enteropathogenic Escherichia coli
    • Ibarra JA, Villalba MI, Puente JL. 2003. Identification of the DNA binding sites of PerA, the transcriptional activator of the bfp and per operons in enteropathogenic Escherichia coli. J Bacteriol 185:2835-2847. http://dx.doi.org/10.1128/JB.185.9.2835-2847.2003.
    • (2003) J Bacteriol , vol.185 , pp. 2835-2847
    • Ibarra, J.A.1    Villalba, M.I.2    Puente, J.L.3
  • 31
    • 0345643486 scopus 로고    scopus 로고
    • Autoactivation and environmental regulation of bfpT expression, the gene coding for the transcriptional activator of bfpA in enteropathogenic Escherichia coli
    • Martinez-Laguna Y, Calva E, Puente JL. 1999. Autoactivation and environmental regulation of bfpT expression, the gene coding for the transcriptional activator of bfpA in enteropathogenic Escherichia coli. Mol Microbiol 33:153-166. http://dx.doi.org/10.1046/j.1365-2958.1999.01460.x.
    • (1999) Mol Microbiol , vol.33 , pp. 153-166
    • Martinez-Laguna, Y.1    Calva, E.2    Puente, J.L.3
  • 32
    • 8544239349 scopus 로고    scopus 로고
    • Direct and indirect transcriptional activation of virulence genes by an AraC-like protein, PerA from enteropathogenic Escherichia coli
    • Porter ME, Mitchell P, Roe AJ, Free A, Smith DGE, Gally DL. 2004. Direct and indirect transcriptional activation of virulence genes by an AraC-like protein, PerA from enteropathogenic Escherichia coli. Mol Microbiol 54:1117-1133. http://dx.doi.org/10.1111/j.1365-2958.2004.04333.x.
    • (2004) Mol Microbiol , vol.54 , pp. 1117-1133
    • Porter, M.E.1    Mitchell, P.2    Roe, A.J.3    Free, A.4    Smith, D.G.E.5    Gally, D.L.6
  • 33
    • 33947422130 scopus 로고    scopus 로고
    • Repression of the inner membrane lipoprotein NlpA by Rns in enterotoxigenic Escherichia coli
    • Bodero MD, Pilonieta MC, Munson GP. 2007. Repression of the inner membrane lipoprotein NlpA by Rns in enterotoxigenic Escherichia coli. J Bacteriol 189:1627-1632. http://dx.doi.org/10.1128/JB.01714-06.
    • (2007) J Bacteriol , vol.189 , pp. 1627-1632
    • Bodero, M.D.1    Pilonieta, M.C.2    Munson, G.P.3
  • 34
    • 0024502499 scopus 로고
    • A plasmid-encoded regulatory gene, rns, required for expression of the CS1 and CS2 adhesins of enterotoxigenic Escherichia coli
    • Caron J, Coffield LM, Scott JR. 1989. A plasmid-encoded regulatory gene, rns, required for expression of the CS1 and CS2 adhesins of enterotoxigenic Escherichia coli. Proc Natl Acad Sci U S A 86:963-967. http://dx.doi.org/10.1073/pnas.86.3.963.
    • (1989) Proc Natl Acad Sci U S A , vol.86 , pp. 963-967
    • Caron, J.1    Coffield, L.M.2    Scott, J.R.3
  • 35
    • 0028144753 scopus 로고
    • Regulation of rns, a positive regulatory factor for pili of enterotoxigenic Escherichia coli
    • Froehlich B, Husmann L, Caron J, Scott JR. 1994. Regulation of rns, a positive regulatory factor for pili of enterotoxigenic Escherichia coli. J Bacteriol 176:5385-5392.
    • (1994) J Bacteriol , vol.176 , pp. 5385-5392
    • Froehlich, B.1    Husmann, L.2    Caron, J.3    Scott, J.R.4
  • 36
    • 0032949361 scopus 로고    scopus 로고
    • Binding site recognition by Rns, a virulence regulator in the AraC family
    • Munson GP, Scott JR. 1999. Binding site recognition by Rns, a virulence regulator in the AraC family. J Bacteriol 181:2110-2117.
    • (1999) J Bacteriol , vol.181 , pp. 2110-2117
    • Munson, G.P.1    Scott, J.R.2
  • 37
    • 33747080208 scopus 로고    scopus 로고
    • Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli
    • Dudley EG, Thomson NR, Parkhill J, Morin NP, Nataro JP. 2006. Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli. Mol Microbiol 61:1267-1282. http://dx.doi.org/10.1111/j.1365-2958.2006.05281.x.
    • (2006) Mol Microbiol , vol.61 , pp. 1267-1282
    • Dudley, E.G.1    Thomson, N.R.2    Parkhill, J.3    Morin, N.P.4    Nataro, J.P.5
  • 38
    • 84871874238 scopus 로고    scopus 로고
    • Characterization of the AggR regulon in enteroaggregative E. coli
    • Morin N, Santiago AE, Ernst RK, Guillot SJ, Nataro JP. 2013. Characterization of the AggR regulon in enteroaggregative E. coli. Infect Immun 81:122-132. http://dx.doi.org/10.1128/IAI.00676-12.
    • (2013) Infect Immun , vol.81 , pp. 122-132
    • Morin, N.1    Santiago, A.E.2    Ernst, R.K.3    Guillot, S.J.4    Nataro, J.P.5
  • 39
    • 77949362786 scopus 로고    scopus 로고
    • Autoactivation of the AggR regulator of enteroaggregative Escherichia coli in vitro and in vivo
    • Morin N, Tirling C, Ivison SM, Kaur AP, Nataro JP, Steiner TS. 2010. Autoactivation of the AggR regulator of enteroaggregative Escherichia coli in vitro and in vivo. FEMS Immunol Med Microbiol 58:344-355. http://dx.doi.org/10.1111/j.1574-695X.2010.00645.x.
    • (2010) FEMS Immunol Med Microbiol , vol.58 , pp. 344-355
    • Morin, N.1    Tirling, C.2    Ivison, S.M.3    Kaur, A.P.4    Nataro, J.P.5    Steiner, T.S.6
  • 40
    • 0027933197 scopus 로고
    • AggR, a transcriptional activator of aggregative adherence fimbria I expression in enteroaggregative Escherichia coli
    • Nataro JP, Yikang D, Yingkang D, Walker K. 1994. AggR, a transcriptional activator of aggregative adherence fimbria I expression in enteroaggregative Escherichia coli. J Bacteriol 176:4691-4699.
    • (1994) J Bacteriol , vol.176 , pp. 4691-4699
    • Nataro, J.P.1    Yikang, D.2    Yingkang, D.3    Walker, K.4
  • 41
    • 0033815224 scopus 로고    scopus 로고
    • The Vibrio cholerae ToxR/TcpP/ToxT virulence cascade: distinct roles for two membrane-localized transcriptional activators on a single promoter
    • Krukonis ES, Yu RR, Dirita VJ. 2000. The Vibrio cholerae ToxR/TcpP/ToxT virulence cascade: distinct roles for two membrane-localized transcriptional activators on a single promoter. Mol Microbiol 38:67-84. http://dx.doi.org/10.1046/j.1365-2958.2000.02111.x.
    • (2000) Mol Microbiol , vol.38 , pp. 67-84
    • Krukonis, E.S.1    Yu, R.R.2    Dirita, V.J.3
  • 42
    • 0032987096 scopus 로고    scopus 로고
    • Environmental signals modulate ToxT-dependent virulence factor expression in Vibrio cholerae
    • Schuhmacher DA, Klose KE. 1999. Environmental signals modulate ToxT-dependent virulence factor expression in Vibrio cholerae. J Bacteriol 181:1508-1514.
    • (1999) J Bacteriol , vol.181 , pp. 1508-1514
    • Schuhmacher, D.A.1    Klose, K.E.2
  • 43
    • 28044437734 scopus 로고    scopus 로고
    • Vibrio cholerae ToxT independently activates the divergently transcribed aldA and tagA genes
    • Withey JH, DiRita VJ. 2005. Vibrio cholerae ToxT independently activates the divergently transcribed aldA and tagA genes. J Bacteriol 187: 7890-7900. http://dx.doi.org/10.1128/JB.187.23.7890-7900.2005.
    • (2005) J Bacteriol , vol.187 , pp. 7890-7900
    • Withey, J.H.1    DiRita, V.J.2
  • 44
    • 0036195527 scopus 로고    scopus 로고
    • Regulation of gene expression in Vibrio cholerae by ToxT involves both antirepression and RNA polymerase stimulation
    • Yu RR, DiRita VJ. 2002. Regulation of gene expression in Vibrio cholerae by ToxT involves both antirepression and RNA polymerase stimulation. Mol Microbiol 43:119-134. http://dx.doi.org/10.1046/j.1365-2958.2002.02721.x.
    • (2002) Mol Microbiol , vol.43 , pp. 119-134
    • Yu, R.R.1    DiRita, V.J.2
  • 45
    • 0032401769 scopus 로고    scopus 로고
    • Thermoregulation of Shigella and Escherichia coli EIEC pathogenicity. A temperature-dependent structural transition of DNA modulates accessibility of virF promoter to transcriptional repressor H-NS
    • Falconi M, Colonna B, Prosseda G, Micheli G, Gualerzi CO. 1998. Thermoregulation of Shigella and Escherichia coli EIEC pathogenicity. A temperature-dependent structural transition of DNA modulates accessibility of virF promoter to transcriptional repressor H-NS. EMBO J 17: 7033-7043.
    • (1998) EMBO J , vol.17 , pp. 7033-7043
    • Falconi, M.1    Colonna, B.2    Prosseda, G.3    Micheli, G.4    Gualerzi, C.O.5
  • 46
    • 0024082296 scopus 로고
    • Expression of four virulence antigens of Shigella flexneri is positively regulated at the transcriptional level by the 30 kilodalton virF protein
    • Sakai T. 1988. Expression of four virulence antigens of Shigella flexneri is positively regulated at the transcriptional level by the 30 kilodalton virF protein. Mol Microbiol 2:589. http://dx.doi.org/10.1111/j.1365-2958.1988.tb00067.x.
    • (1988) Mol Microbiol , vol.2 , pp. 589
    • Sakai, T.1
  • 47
    • 80054060254 scopus 로고    scopus 로고
    • A multifactor regulatory circuit involving H-NS, VirF and an antisense RNA modulates transcription of the virulence gene icsA of Shigella flexneri
    • Tran CN, Giangrossi M, Prosseda G, Brandi A, Di Martino ML, Colonna B, Falconi M. 2011. A multifactor regulatory circuit involving H-NS, VirF and an antisense RNA modulates transcription of the virulence gene icsA of Shigella flexneri. Nucleic Acids Res 39:8122-8134. http://dx.doi.org/10.1093/nar/gkr521.
    • (2011) Nucleic Acids Res , vol.39 , pp. 8122-8134
    • Tran, C.N.1    Giangrossi, M.2    Prosseda, G.3    Brandi, A.4    Di Martino, M.L.5    Colonna, B.6    Falconi, M.7
  • 48
    • 33645471024 scopus 로고    scopus 로고
    • The toxbox: specific DNA sequence requirements for activation of Vibrio cholerae virulence genes by ToxT
    • Withey JH, DiRita VJ. 2006. The toxbox: specific DNA sequence requirements for activation of Vibrio cholerae virulence genes by ToxT. Mol Microbiol 59:1779-1789. http://dx.doi.org/10.1111/j.1365-2958.2006.05053.x.
    • (2006) Mol Microbiol , vol.59 , pp. 1779-1789
    • Withey, J.H.1    DiRita, V.J.2
  • 49
    • 0033023573 scopus 로고    scopus 로고
    • Identification of UreR binding sites in the Enterobacteriaceae plasmid-encoded and Proteus mirabilis urease gene operons
    • Thomas VJ, Collins CM. 1999. Identification of UreR binding sites in the Enterobacteriaceae plasmid-encoded and Proteus mirabilis urease gene operons. Mol Microbiol 31:1417-1428. http://dx.doi.org/10.1046/j.1365-2958.1999.01283.x.
    • (1999) Mol Microbiol , vol.31 , pp. 1417-1428
    • Thomas, V.J.1    Collins, C.M.2
  • 50
    • 79952779355 scopus 로고    scopus 로고
    • Autogenous transcriptional regulation of the regA gene, encoding an AraC-like, essential virulence regulator in Citrobacter rodentium
    • Tan A, Yang J, Tauschek M, Praszkier J, Robins-Browne RM. 2011. Autogenous transcriptional regulation of the regA gene, encoding an AraC-like, essential virulence regulator in Citrobacter rodentium. J Bacteriol 193:1777-1782. http://dx.doi.org/10.1128/JB.01224-10.
    • (2011) J Bacteriol , vol.193 , pp. 1777-1782
    • Tan, A.1    Yang, J.2    Tauschek, M.3    Praszkier, J.4    Robins-Browne, R.M.5
  • 51
    • 0346252350 scopus 로고    scopus 로고
    • Differential regulation of the Proteus mirabilis urease gene cluster by UreR and H-NS
    • Poore CA, Mobley HLT. 2003. Differential regulation of the Proteus mirabilis urease gene cluster by UreR and H-NS. Microbiology 149:3383-3394. http://dx.doi.org/10.1099/mic.0.26624-0.
    • (2003) Microbiology , vol.149 , pp. 3383-3394
    • Poore, C.A.1    Mobley, H.L.T.2
  • 52
    • 55849083511 scopus 로고    scopus 로고
    • RegA, an AraC-like protein, is a global transcriptional regulator that controls virulence gene expression in Citrobacter rodentium
    • Hart E, Yang J, Tauschek M, Kelly M, Wakefield MJ, Frankel G, Hartland EL, Robins-Browne RM. 2008. RegA, an AraC-like protein, is a global transcriptional regulator that controls virulence gene expression in Citrobacter rodentium. Infect Immun 76:5247-5256. http://dx.doi.org/10.1128/IAI.00770-08.
    • (2008) Infect Immun , vol.76 , pp. 5247-5256
    • Hart, E.1    Yang, J.2    Tauschek, M.3    Kelly, M.4    Wakefield, M.J.5    Frankel, G.6    Hartland, E.L.7    Robins-Browne, R.M.8
  • 54
    • 41049087858 scopus 로고    scopus 로고
    • Bicarbonate-mediated transcriptional activation of divergent operons by the virulence regulatory protein, RegA, from Citrobacter rodentium
    • Yang J, Hart E, Tauschek M, Price GD, Hartland EL, Strugnell RA, Robins-Browne RM. 2008. Bicarbonate-mediated transcriptional activation of divergent operons by the virulence regulatory protein, RegA, from Citrobacter rodentium. Mol Microbiol 68:314-327. http://dx.doi.org/10.1111/j.1365-2958.2008.06171.x.
    • (2008) Mol Microbiol , vol.68 , pp. 314-327
    • Yang, J.1    Hart, E.2    Tauschek, M.3    Price, G.D.4    Hartland, E.L.5    Strugnell, R.A.6    Robins-Browne, R.M.7
  • 55
    • 70449526073 scopus 로고    scopus 로고
    • Bicarbonate-mediated stimulation of RegA, the global virulence regulator from Citrobacter rodentium
    • Yang J, Dogovski C, Hocking D, Tauschek M, Perugini M, Robins-Browne RM. 2009. Bicarbonate-mediated stimulation of RegA, the global virulence regulator from Citrobacter rodentium. J Mol Biol 394:591-599. http://dx.doi.org/10.1016/j.jmb.2009.10.033.
    • (2009) J Mol Biol , vol.394 , pp. 591-599
    • Yang, J.1    Dogovski, C.2    Hocking, D.3    Tauschek, M.4    Perugini, M.5    Robins-Browne, R.M.6
  • 56
    • 77953583282 scopus 로고    scopus 로고
    • Virulence regulation in Citrobacter rodentium: the art of timing
    • Yang J, Tauschek M, Hart E, Hartland EL, Robins-Browne RM. 2010. Virulence regulation in Citrobacter rodentium: the art of timing. Microb Biotechnol 3:259-268. http://dx.doi.org/10.1111/j.1751-7915.2009.00114.x.
    • (2010) Microb Biotechnol , vol.3 , pp. 259-268
    • Yang, J.1    Tauschek, M.2    Hart, E.3    Hartland, E.L.4    Robins-Browne, R.M.5
  • 59
    • 0017129243 scopus 로고
    • Transposition and fusion of the lac genes to selected promoters in Escherichia coli using bacteriophage lambda and Mu
    • Casadaban MJ. 1976. Transposition and fusion of the lac genes to selected promoters in Escherichia coli using bacteriophage lambda and Mu. J Mol Biol 104:541-555. http://dx.doi.org/10.1016/0022-2836(76)90119-4.
    • (1976) J Mol Biol , vol.104 , pp. 541-555
    • Casadaban, M.J.1
  • 60
    • 53849112279 scopus 로고    scopus 로고
    • Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5
    • Fricke WF, Wright MS, Lindell AH, Harkins DM, Baker-Austin C, Ravel J, Stepanauskas R. 2008. Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5. J Bacteriol 190:6779-6794. http://dx.doi.org/10.1128/JB.00661-08.
    • (2008) J Bacteriol , vol.190 , pp. 6779-6794
    • Fricke, W.F.1    Wright, M.S.2    Lindell, A.H.3    Harkins, D.M.4    Baker-Austin, C.5    Ravel, J.6    Stepanauskas, R.7
  • 61
    • 0026532079 scopus 로고
    • Mutations affecting translational coupling between the rep genes of an IncB miniplasmid
    • Praszkier J, Wilson IW, Pittard AJ. 1992. Mutations affecting translational coupling between the rep genes of an IncB miniplasmid. J Bacteriol 174:2376-2383.
    • (1992) J Bacteriol , vol.174 , pp. 2376-2383
    • Praszkier, J.1    Wilson, I.W.2    Pittard, A.J.3
  • 62
    • 0027987492 scopus 로고
    • Regulation of aroL expression by TyrR protein and Trp repressor in Escherichia coli K-12
    • Lawley B, Pittard AJ. 1994. Regulation of aroL expression by TyrR protein and Trp repressor in Escherichia coli K-12. J Bacteriol 176:6921-6930.
    • (1994) J Bacteriol , vol.176 , pp. 6921-6930
    • Lawley, B.1    Pittard, A.J.2
  • 63
    • 0347823003 scopus 로고    scopus 로고
    • MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences
    • Campanella J, Bitincka L, Smalley J. 2003. MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences. BMC Bioinformatics 4:29. http://dx.doi.org/10.1186/1471-2105-4-29.
    • (2003) BMC Bioinformatics , vol.4 , pp. 29
    • Campanella, J.1    Bitincka, L.2    Smalley, J.3
  • 64
    • 77955434397 scopus 로고    scopus 로고
    • Ancestral lineages of human enterotoxigenic Escherichia coli
    • Steinsland H, Lacher DW, Sommerfelt H, Whittam TS. 2010. Ancestral lineages of human enterotoxigenic Escherichia coli. J Clin Microbiol 48: 2916-2924. http://dx.doi.org/10.1128/JCM.02432-09.
    • (2010) J Clin Microbiol , vol.48 , pp. 2916-2924
    • Steinsland, H.1    Lacher, D.W.2    Sommerfelt, H.3    Whittam, T.S.4
  • 65
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739. http://dx.doi.org/10.1093/molbev/msr121.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 66
    • 79953306448 scopus 로고    scopus 로고
    • Easyfig: a genome comparison visualizer
    • Sullivan MJ, Petty NK, Beatson SA. 2011. Easyfig: a genome comparison visualizer. Bioinformatics 27:1009-1010. http://dx.doi.org/10.1093/bioinformatics/btr039.
    • (2011) Bioinformatics , vol.27 , pp. 1009-1010
    • Sullivan, M.J.1    Petty, N.K.2    Beatson, S.A.3
  • 69
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
    • 12 February
    • Smyth GK. 12 February 2004. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 3:Article3. http://dx.doi.org/10.2202/1544-6115.1027.
    • (2004) Stat Appl Genet Mol Biol , vol.3
    • Smyth, G.K.1
  • 70
    • 33644872577 scopus 로고    scopus 로고
    • Limma: linear models for microarray data
    • Gentleman VC, Dudoit S, Irizarry R, Huber W (ed), Springer, New York, NY
    • Smyth GK. 2005. Limma: linear models for microarray data, p 397-420. In Gentleman VC, Dudoit S, Irizarry R, Huber W (ed), Bioinformatics and computational biology solutions using R and Bioconductor. Springer, New York, NY.
    • (2005) Bioinformatics and computational biology solutions using R and Bioconductor , pp. 397-420
    • Smyth, G.K.1
  • 71
    • 0242333835 scopus 로고    scopus 로고
    • Normalization of cDNA microarray data
    • Smyth GK, Speed T. 2003. Normalization of cDNA microarray data. Methods 31:265-273. http://dx.doi.org/10.1016/S1046-2023(03)00155-5.
    • (2003) Methods , vol.31 , pp. 265-273
    • Smyth, G.K.1    Speed, T.2
  • 72
    • 0036081355 scopus 로고    scopus 로고
    • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    • Edgar R, Domrachev M, Lash AE. 2002. Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res 30:207-210. http://dx.doi.org/10.1093/nar/30.1.207.
    • (2002) Nucleic Acids Res , vol.30 , pp. 207-210
    • Edgar, R.1    Domrachev, M.2    Lash, A.E.3
  • 74
    • 77954912139 scopus 로고    scopus 로고
    • Phylogenetic incongruence arising from fragmented speciation in enteric bacteria
    • Retchless AC, Lawrence JG. 2010. Phylogenetic incongruence arising from fragmented speciation in enteric bacteria. Proc Natl Acad Sci U S A 107:11453-11458. http://dx.doi.org/10.1073/pnas.1001291107.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 11453-11458
    • Retchless, A.C.1    Lawrence, J.G.2
  • 75
    • 34247221579 scopus 로고    scopus 로고
    • The tad locus: postcards from the widespread colonization island
    • Tomich M, Planet PJ, Figurski DH. 2007. The tad locus: postcards from the widespread colonization island. Nat Rev Microbiol 5:363-375. http://dx.doi.org/10.1038/nrmicro1636.
    • (2007) Nat Rev Microbiol , vol.5 , pp. 363-375
    • Tomich, M.1    Planet, P.J.2    Figurski, D.H.3
  • 77
    • 0021613767 scopus 로고
    • A repetitive DNA sequence, rhs, responsible for duplications within the Escherichia coli K-12 chromosome
    • Lin R-J, Capage M, Hill CW. 1984. A repetitive DNA sequence, rhs, responsible for duplications within the Escherichia coli K-12 chromosome. J Mol Biol 177:1-18. http://dx.doi.org/10.1016/0022-2836(84)90054-8.
    • (1984) J Mol Biol , vol.177 , pp. 1-18
    • Lin, R.-J.1    Capage, M.2    Hill, C.W.3
  • 79
    • 84861972274 scopus 로고    scopus 로고
    • Regulated virulence controls the ability of a pathogen to compete with the gut microbiota
    • Kamada N, Kim Y-G, Sham HP, Vallance BA, Puente JL, Martens EC, Núñez G. 2012. Regulated virulence controls the ability of a pathogen to compete with the gut microbiota. Science 336:1325-1329. http://dx.doi.org/10.1126/science.1222195.
    • (2012) Science , vol.336 , pp. 1325-1329
    • Kamada, N.1    Kim, Y.-G.2    Sham, H.P.3    Vallance, B.A.4    Puente, J.L.5    Martens, E.C.6    Núñez, G.7
  • 80
    • 2442560235 scopus 로고    scopus 로고
    • H-NS: a universal regulator for a dynamic genome
    • Dorman CJ. 2004. H-NS: a universal regulator for a dynamic genome. Nat Rev Microbiol 2:391-400. http://dx.doi.org/10.1038/nrmicro883.
    • (2004) Nat Rev Microbiol , vol.2 , pp. 391-400
    • Dorman, C.J.1
  • 81
    • 33846465923 scopus 로고    scopus 로고
    • H-NS, the genome sentinel
    • Dorman CJ. 2007. H-NS, the genome sentinel. Nat Rev Microbiol 5:157-161. http://dx.doi.org/10.1038/nrmicro1598.
    • (2007) Nat Rev Microbiol , vol.5 , pp. 157-161
    • Dorman, C.J.1
  • 82
    • 34250724903 scopus 로고    scopus 로고
    • Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA
    • Navarre WW, McClelland M, Libby SJ, Fang FC. 2007. Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA. Genes Dev 21:1456-1471. http://dx.doi.org/10.1101/gad.1543107.
    • (2007) Genes Dev , vol.21 , pp. 1456-1471
    • Navarre, W.W.1    McClelland, M.2    Libby, S.J.3    Fang, F.C.4
  • 83
    • 33746008173 scopus 로고    scopus 로고
    • Selective silencing of foreign DNA with Low GC content by the H-NS protein in Salmonella
    • Navarre WW, Porwollik S, Wang Y, McClelland M, Rosen H, Libby SJ, Fang FC. 2006. Selective silencing of foreign DNA with Low GC content by the H-NS protein in Salmonella. Science 313:236-238. http://dx.doi.org/10.1126/science.1128794.
    • (2006) Science , vol.313 , pp. 236-238
    • Navarre, W.W.1    Porwollik, S.2    Wang, Y.3    McClelland, M.4    Rosen, H.5    Libby, S.J.6    Fang, F.C.7
  • 84
    • 33750898424 scopus 로고    scopus 로고
    • Escherichia coli histone-like protein H-NS preferentially binds to horizontally acquired DNA in association with RNA polymerase
    • Oshima T, Ishikawa S, Kurokawa K, Aiba H, Ogasawara N. 2006. Escherichia coli histone-like protein H-NS preferentially binds to horizontally acquired DNA in association with RNA polymerase. DNA Res 13: 141-153. http://dx.doi.org/10.1093/dnares/dsl009.
    • (2006) DNA Res , vol.13 , pp. 141-153
    • Oshima, T.1    Ishikawa, S.2    Kurokawa, K.3    Aiba, H.4    Ogasawara, N.5
  • 85
    • 53449102029 scopus 로고    scopus 로고
    • Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria
    • Stoebel DM, Free A, Dorman CJ. 2008. Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria. Microbiology 154:2533-2545. http://dx.doi.org/10.1099/mic.0.2008/020693-0.
    • (2008) Microbiology , vol.154 , pp. 2533-2545
    • Stoebel, D.M.1    Free, A.2    Dorman, C.J.3
  • 86
    • 0026482190 scopus 로고
    • A plasmidencoded type IV fimbrial gene of enteropathogenic Escherichia coli associated with localized adherence
    • Donnenberg MS, Giron JA, Nataro JP, Kaper JB. 1992. A plasmidencoded type IV fimbrial gene of enteropathogenic Escherichia coli associated with localized adherence. Mol Microbiol 6:3427-3437. http://dx.doi.org/10.1111/j.1365-2958.1992.tb02210.x.
    • (1992) Mol Microbiol , vol.6 , pp. 3427-3437
    • Donnenberg, M.S.1    Giron, J.A.2    Nataro, J.P.3    Kaper, J.B.4
  • 88
    • 72049098202 scopus 로고    scopus 로고
    • LrhA positively controls the expression of the locus of enterocyte effacement genes in enterohemorrhagic Escherichia coli by differential regulation of their master regulators PchA and PchB
    • Honda N, Iyoda S, Yamamoto S, Terajima J, Watanabe H. 2009. LrhA positively controls the expression of the locus of enterocyte effacement genes in enterohemorrhagic Escherichia coli by differential regulation of their master regulators PchA and PchB. Mol Microbiol 74:1393-1341. http://dx.doi.org/10.1111/j.1365-2958.2009.06937.x.
    • (2009) Mol Microbiol , vol.74 , pp. 1341-1393
    • Honda, N.1    Iyoda, S.2    Yamamoto, S.3    Terajima, J.4    Watanabe, H.5
  • 89
    • 0036068774 scopus 로고    scopus 로고
    • LrhA as a new transcriptional key regulator of flagella, motility and chemotaxis genes in Escherichia coli
    • Lehnen D, Blumer C, Polen T, Wackwitz B, Wendisch VF, Unden G. 2002. LrhA as a new transcriptional key regulator of flagella, motility and chemotaxis genes in Escherichia coli. Mol Microbiol 45:521-532. http://dx.doi.org/10.1046/j.1365-2958.2002.03032.x.
    • (2002) Mol Microbiol , vol.45 , pp. 521-532
    • Lehnen, D.1    Blumer, C.2    Polen, T.3    Wackwitz, B.4    Wendisch, V.F.5    Unden, G.6
  • 90
    • 80855140093 scopus 로고    scopus 로고
    • Coordinate control of the locus of enterocyte effacement and enterohemolysin genes by multiple common virulence regulators in enterohemorrhagic Escherichia coli
    • Iyoda S, Honda N, Saitoh T, Shimuta K, Terajima J, Watanabe H, Ohnishi M. 2011. Coordinate control of the locus of enterocyte effacement and enterohemolysin genes by multiple common virulence regulators in enterohemorrhagic Escherichia coli. Infect Immun 79:4628-4637. http://dx.doi.org/10.1128/IAI.05023-11.
    • (2011) Infect Immun , vol.79 , pp. 4628-4637
    • Iyoda, S.1    Honda, N.2    Saitoh, T.3    Shimuta, K.4    Terajima, J.5    Watanabe, H.6    Ohnishi, M.7
  • 91
    • 0027764344 scopus 로고
    • Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation
    • Livingstone CD, Barton GJ. 1993. Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation. Comput Appl Biosci 9:745-756.
    • (1993) Comput Appl Biosci , vol.9 , pp. 745-756
    • Livingstone, C.D.1    Barton, G.J.2

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.