메뉴 건너뛰기




Volumn 7, Issue 4, 2011, Pages

Citrobacter rodentium is an unstable pathogen showing evidence of significant genomic flux

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTOME; BACTERIAL DNA;

EID: 79955753012     PISSN: 15537366     EISSN: 15537374     Source Type: Journal    
DOI: 10.1371/journal.ppat.1002018     Document Type: Article
Times cited : (33)

References (68)
  • 1
    • 0035950154 scopus 로고    scopus 로고
    • Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18
    • Parkhill J, Dougan G, James KD, Thomson NR, Pickard D, et al. (2001) Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18. Nature 413: 848-852.
    • (2001) Nature , vol.413 , pp. 848-852
    • Parkhill, J.1    Dougan, G.2    James, K.D.3    Thomson, N.R.4    Pickard, D.5
  • 2
    • 0035807385 scopus 로고    scopus 로고
    • Genome sequence of Yersinia pestis, the causative agent of plague
    • Parkhill J, Wren BW, Thomson NR, Titball RW, Holden MT, et al. (2001) Genome sequence of Yersinia pestis, the causative agent of plague. Nature 413: 523-527.
    • (2001) Nature , vol.413 , pp. 523-527
    • Parkhill, J.1    Wren, B.W.2    Thomson, N.R.3    Titball, R.W.4    Holden, M.T.5
  • 4
    • 0027231559 scopus 로고
    • Attaching and effacing locus of a Citrobacter freundii biotype that causes transmissible murine colonic hyperplasia
    • Schauer DB, Falkow S, (1993) Attaching and effacing locus of a Citrobacter freundii biotype that causes transmissible murine colonic hyperplasia. Infect Immun 61: 2486-2492.
    • (1993) Infect Immun , vol.61 , pp. 2486-2492
    • Schauer, D.B.1    Falkow, S.2
  • 7
    • 0034823881 scopus 로고    scopus 로고
    • Locus of enterocyte effacement from Citrobacter rodentium: sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens
    • Deng W, Li Y, Vallance BA, Finlay BB, (2001) Locus of enterocyte effacement from Citrobacter rodentium: sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens. Infect Immun 69: 6323-6335.
    • (2001) Infect Immun , vol.69 , pp. 6323-6335
    • Deng, W.1    Li, Y.2    Vallance, B.A.3    Finlay, B.B.4
  • 8
    • 0035029103 scopus 로고    scopus 로고
    • Molecular pathogenesis of Citrobacter rodentium and transmissible murine colonic hyperplasia
    • Luperchio SA, Schauer DB, (2001) Molecular pathogenesis of Citrobacter rodentium and transmissible murine colonic hyperplasia. Microbes Infect 3: 333-340.
    • (2001) Microbes Infect , vol.3 , pp. 333-340
    • Luperchio, S.A.1    Schauer, D.B.2
  • 11
    • 0023875582 scopus 로고
    • Genetic control in the susceptibility of germfree inbred mice to infection by Escherichia coli O115a,c:K(B)
    • Itoh K, Matsui T, Tsuji K, Mitsuoka T, Ueda K, (1988) Genetic control in the susceptibility of germfree inbred mice to infection by Escherichia coli O115a,c:K(B). Infect Immun 56: 930-935.
    • (1988) Infect Immun , vol.56 , pp. 930-935
    • Itoh, K.1    Matsui, T.2    Tsuji, K.3    Mitsuoka, T.4    Ueda, K.5
  • 12
    • 0014635250 scopus 로고
    • Infectious megaenteron of mice. I. Manifestation and pathological observation
    • Muto T, Nakagawa M, Isobe Y, Saito M, Nakano T, (1969) Infectious megaenteron of mice. I. Manifestation and pathological observation. Jpn J Med Sci Biol 22: 363-374.
    • (1969) Jpn J Med Sci Biol , vol.22 , pp. 363-374
    • Muto, T.1    Nakagawa, M.2    Isobe, Y.3    Saito, M.4    Nakano, T.5
  • 14
    • 0000984882 scopus 로고
    • Citrobacter freundii associated with diarrhea in laboratory mice
    • Brennan PC, Fritz TE, Flynn RJ, Poole CM, (1965) Citrobacter freundii associated with diarrhea in laboratory mice. Lab Anim Care 15: 266-275.
    • (1965) Lab Anim Care , vol.15 , pp. 266-275
    • Brennan, P.C.1    Fritz, T.E.2    Flynn, R.J.3    Poole, C.M.4
  • 15
    • 0016212092 scopus 로고
    • Colitis in mice with a high incidence of rectal prolapse
    • Ediger RD, Kovatch RM, Rabstein MM, (1974) Colitis in mice with a high incidence of rectal prolapse. Lab Anim Sci 24: 488-494.
    • (1974) Lab Anim Sci , vol.24 , pp. 488-494
    • Ediger, R.D.1    Kovatch, R.M.2    Rabstein, M.M.3
  • 16
    • 0027422046 scopus 로고
    • Classification of citrobacteria by DNA hybridization: designation of Citrobacter farmeri sp. nov., Citrobacter youngae sp. nov., Citrobacter braakii sp. nov., Citrobacter werkmanii sp. nov., Citrobacter sedlakii sp. nov., and three unnamed Citrobacter genomospecies
    • Brenner DJ, Grimont PA, Steigerwalt AG, Fanning GR, Ageron E, et al. (1993) Classification of citrobacteria by DNA hybridization: designation of Citrobacter farmeri sp. nov., Citrobacter youngae sp. nov., Citrobacter braakii sp. nov., Citrobacter werkmanii sp. nov., Citrobacter sedlakii sp. nov., and three unnamed Citrobacter genomospecies. Int J Syst Bacteriol 43: 645-658.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 645-658
    • Brenner, D.J.1    Grimont, P.A.2    Steigerwalt, A.G.3    Fanning, G.R.4    Ageron, E.5
  • 17
    • 0034461754 scopus 로고    scopus 로고
    • Citrobacter rodentium, the causative agent of transmissible murine colonic hyperplasia, exhibits clonality: synonymy of C. rodentium and mouse-pathogenic Escherichia coli
    • Luperchio SA, Newman JV, Dangler CA, Schrenzel MD, Brenner DJ, et al. (2000) Citrobacter rodentium, the causative agent of transmissible murine colonic hyperplasia, exhibits clonality: synonymy of C. rodentium and mouse-pathogenic Escherichia coli. J Clin Microbiol 38: 4343-4350.
    • (2000) J Clin Microbiol , vol.38 , pp. 4343-4350
    • Luperchio, S.A.1    Newman, J.V.2    Dangler, C.A.3    Schrenzel, M.D.4    Brenner, D.J.5
  • 18
    • 0035319063 scopus 로고    scopus 로고
    • Comparison of bacteriological, genetic and pathological characters between Escherichia coli O115a,c:K(B) and Citrobacter rodentium
    • Okutani A, Tobe T, Sasakawa C, Nozu R, Gotoh K, et al. (2001) Comparison of bacteriological, genetic and pathological characters between Escherichia coli O115a,c:K(B) and Citrobacter rodentium. Exp Anim 50: 183-186.
    • (2001) Exp Anim , vol.50 , pp. 183-186
    • Okutani, A.1    Tobe, T.2    Sasakawa, C.3    Nozu, R.4    Gotoh, K.5
  • 19
    • 0017606810 scopus 로고
    • Dietary, bacterial, and host genetic interactions in the pathogenesis of transmissible murine colonic hyperplasia
    • Barthold SW, Osbaldiston GW, Jonas AM, (1977) Dietary, bacterial, and host genetic interactions in the pathogenesis of transmissible murine colonic hyperplasia. Lab Anim Sci 27: 938-945.
    • (1977) Lab Anim Sci , vol.27 , pp. 938-945
    • Barthold, S.W.1    Osbaldiston, G.W.2    Jonas, A.M.3
  • 20
    • 73649105812 scopus 로고    scopus 로고
    • The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli
    • Petty NK, Bulgin R, Crepin VF, Cerdeno-Tarraga AM, Schroeder GN, et al. (2010) The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli. J Bacteriol 192: 525-538.
    • (2010) J Bacteriol , vol.192 , pp. 525-538
    • Petty, N.K.1    Bulgin, R.2    Crepin, V.F.3    Cerdeno-Tarraga, A.M.4    Schroeder, G.N.5
  • 21
    • 0029985398 scopus 로고    scopus 로고
    • Asymmetric substitution patterns in the two DNA strands of bacteria
    • Lobry JR, (1996) Asymmetric substitution patterns in the two DNA strands of bacteria. Mol Biol Evol 13: 660-665.
    • (1996) Mol Biol Evol , vol.13 , pp. 660-665
    • Lobry, J.R.1
  • 23
    • 0035950182 scopus 로고    scopus 로고
    • Complete genome sequence of Salmonella enterica serovar Typhimurium LT2
    • McClelland M, Sanderson KE, Spieth J, Clifton SW, Latreille P, et al. (2001) Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature 413: 852-856.
    • (2001) Nature , vol.413 , pp. 852-856
    • McClelland, M.1    Sanderson, K.E.2    Spieth, J.3    Clifton, S.W.4    Latreille, P.5
  • 24
    • 0031941205 scopus 로고    scopus 로고
    • Chromosomal rearrangements in enteric bacteria
    • Sanderson KE, Liu SL, (1998) Chromosomal rearrangements in enteric bacteria. Electrophoresis 19: 569-572.
    • (1998) Electrophoresis , vol.19 , pp. 569-572
    • Sanderson, K.E.1    Liu, S.L.2
  • 25
    • 69949095870 scopus 로고    scopus 로고
    • Inference of the impact of insertion sequence (IS) elements on bacterial genome diversification through analysis of small-size structural polymorphisms in Escherichia coli O157 genomes
    • Ooka T, Ogura Y, Asadulghani M, Ohnishi M, Nakayama K, et al. (2009) Inference of the impact of insertion sequence (IS) elements on bacterial genome diversification through analysis of small-size structural polymorphisms in Escherichia coli O157 genomes. Genome Res 19: 1809-1816.
    • (2009) Genome Res , vol.19 , pp. 1809-1816
    • Ooka, T.1    Ogura, Y.2    Asadulghani, M.3    Ohnishi, M.4    Nakayama, K.5
  • 26
    • 65649139108 scopus 로고    scopus 로고
    • Genomic analysis of the PAI ICL3 locus in pathogenic LEE-negative Shiga toxin-producing Escherichia coli and Citrobacter rodentium
    • Girardeau JP, Bertin Y, Martin C, (2009) Genomic analysis of the PAI ICL3 locus in pathogenic LEE-negative Shiga toxin-producing Escherichia coli and Citrobacter rodentium. Microbiology 155: 1016-1027.
    • (2009) Microbiology , vol.155 , pp. 1016-1027
    • Girardeau, J.P.1    Bertin, Y.2    Martin, C.3
  • 27
    • 73149111266 scopus 로고    scopus 로고
    • Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement
    • Jackson AP, Thomas GH, Parkhill J, Thomson NR, (2009) Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement. BMC Genomics 10: 584.
    • (2009) BMC Genomics , vol.10 , pp. 584
    • Jackson, A.P.1    Thomas, G.H.2    Parkhill, J.3    Thomson, N.R.4
  • 28
  • 29
    • 14544267783 scopus 로고    scopus 로고
    • The Flag-2 locus, an ancestral gene cluster, is potentially associated with a novel flagellar system from Escherichia coli
    • Ren CP, Beatson SA, Parkhill J, Pallen MJ, (2005) The Flag-2 locus, an ancestral gene cluster, is potentially associated with a novel flagellar system from Escherichia coli. J Bacteriol 187: 1430-1440.
    • (2005) J Bacteriol , vol.187 , pp. 1430-1440
    • Ren, C.P.1    Beatson, S.A.2    Parkhill, J.3    Pallen, M.J.4
  • 30
    • 0141789784 scopus 로고    scopus 로고
    • The type III secretion chaperone FlgN regulates flagellar assembly via a negative feedback loop containing its chaperone substrates FlgK and FlgL
    • Aldridge P, Karlinsey J, Hughes KT, (2003) The type III secretion chaperone FlgN regulates flagellar assembly via a negative feedback loop containing its chaperone substrates FlgK and FlgL. Mol Microbiol 49: 1333-1345.
    • (2003) Mol Microbiol , vol.49 , pp. 1333-1345
    • Aldridge, P.1    Karlinsey, J.2    Hughes, K.T.3
  • 31
    • 42149171933 scopus 로고    scopus 로고
    • Flagellin-dependent and -independent inflammatory responses following infection by enteropathogenic Escherichia coli and Citrobacter rodentium
    • Khan MA, Bouzari S, Ma C, Rosenberger CM, Bergstrom KS, et al. (2008) Flagellin-dependent and-independent inflammatory responses following infection by enteropathogenic Escherichia coli and Citrobacter rodentium. Infect Immun 76: 1410-1422.
    • (2008) Infect Immun , vol.76 , pp. 1410-1422
    • Khan, M.A.1    Bouzari, S.2    Ma, C.3    Rosenberger, C.M.4    Bergstrom, K.S.5
  • 32
    • 0027497782 scopus 로고
    • Evolutionary origin and radiation of the avian-adapted non-motile salmonellae
    • Li J, Smith NH, Nelson K, Crichton PB, Old DC, et al. (1993) Evolutionary origin and radiation of the avian-adapted non-motile salmonellae. J Med Microbiol 38: 129-139.
    • (1993) J Med Microbiol , vol.38 , pp. 129-139
    • Li, J.1    Smith, N.H.2    Nelson, K.3    Crichton, P.B.4    Old, D.C.5
  • 33
    • 0017578170 scopus 로고
    • Analysis of mutations affecting the dissimilation of galactitol (dulcitol) in Escherichia coli K-12
    • Lengeler J, (1977) Analysis of mutations affecting the dissimilation of galactitol (dulcitol) in Escherichia coli K-12. Mol Gen Genet 152: 83-91.
    • (1977) Mol Gen Genet , vol.152 , pp. 83-91
    • Lengeler, J.1
  • 34
    • 0015116894 scopus 로고
    • Establishment and maintenance of repression by bacteriophage lambda: the role of the cI, cII, and cIII proteins
    • Echols H, Green L, (1971) Establishment and maintenance of repression by bacteriophage lambda: the role of the cI, cII, and cIII proteins. Proc Natl Acad Sci U S A 68: 2190-2194.
    • (1971) Proc Natl Acad Sci U S A , vol.68 , pp. 2190-2194
    • Echols, H.1    Green, L.2
  • 35
    • 68249102779 scopus 로고    scopus 로고
    • A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi
    • Perkins TT, Kingsley RA, Fookes MC, Gardner PP, James KD, et al. (2009) A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi. PLoS Genet 5: e1000569.
    • (2009) PLoS Genet , vol.5
    • Perkins, T.T.1    Kingsley, R.A.2    Fookes, M.C.3    Gardner, P.P.4    James, K.D.5
  • 36
    • 77949885065 scopus 로고    scopus 로고
    • A comprehensive proteomic analysis of the type III secretome of Citrobacter rodentium
    • Deng W, de Hoog CL, Yu HB, Li Y, Croxen MA, et al. (2010) A comprehensive proteomic analysis of the type III secretome of Citrobacter rodentium. J Biol Chem 285: 6790-6800.
    • (2010) J Biol Chem , vol.285 , pp. 6790-6800
    • Deng, W.1    de Hoog, C.L.2    Yu, H.B.3    Li, Y.4    Croxen, M.A.5
  • 37
    • 0036299014 scopus 로고    scopus 로고
    • Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus
    • Morgan GJ, Hatfull GF, Casjens S, Hendrix RW, (2002) Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus. J Mol Biol 317: 337-359.
    • (2002) J Mol Biol , vol.317 , pp. 337-359
    • Morgan, G.J.1    Hatfull, G.F.2    Casjens, S.3    Hendrix, R.W.4
  • 38
    • 79955770612 scopus 로고
    • Bacteriophage Mu and its use as a genetic tool
    • In: Galizzi A, editors, London, Academic Press
    • Toussaint A, (1985) Bacteriophage Mu and its use as a genetic tool. In: Galizzi A, editors. Genetics of Bacteria London Academic Press pp. 117-146.
    • (1985) Genetics of Bacteria , pp. 117-146
    • Toussaint, A.1
  • 39
    • 33745248066 scopus 로고    scopus 로고
    • A generalized transducing phage (phiIF3) for the genomically sequenced Serratia marcescens strain Db11: a tool for functional genomics of an opportunistic human pathogen
    • Petty NK, Foulds IJ, Pradel E, Ewbank JJ, Salmond GPC, (2006) A generalized transducing phage (phiIF3) for the genomically sequenced Serratia marcescens strain Db11: a tool for functional genomics of an opportunistic human pathogen. Microbiology 152: 1701-1708.
    • (2006) Microbiology , vol.152 , pp. 1701-1708
    • Petty, N.K.1    Foulds, I.J.2    Pradel, E.3    Ewbank, J.J.4    Salmond, G.P.C.5
  • 40
    • 0038392706 scopus 로고    scopus 로고
    • Bacteriophage observations and evolution
    • Ackermann HW, (2003) Bacteriophage observations and evolution. Res Microbiol 154: 245-251.
    • (2003) Res Microbiol , vol.154 , pp. 245-251
    • Ackermann, H.W.1
  • 41
    • 4544302531 scopus 로고    scopus 로고
    • Organ specificity, colonization and clearance dynamics in vivo following oral challenges with the murine pathogen Citrobacter rodentium
    • Wiles S, Clare S, Harker J, Huett A, Young D, et al. (2004) Organ specificity, colonization and clearance dynamics in vivo following oral challenges with the murine pathogen Citrobacter rodentium. Cell Microbiol 6: 963-972.
    • (2004) Cell Microbiol , vol.6 , pp. 963-972
    • Wiles, S.1    Clare, S.2    Harker, J.3    Huett, A.4    Young, D.5
  • 42
    • 34948814100 scopus 로고    scopus 로고
    • A generalized transducing phage for the murine pathogen Citrobacter rodentium
    • Petty NK, Toribio AL, Goulding D, Foulds I, Thomson N, et al. (2007) A generalized transducing phage for the murine pathogen Citrobacter rodentium. Microbiology 153: 2984-2988.
    • (2007) Microbiology , vol.153 , pp. 2984-2988
    • Petty, N.K.1    Toribio, A.L.2    Goulding, D.3    Foulds, I.4    Thomson, N.5
  • 44
    • 33644889683 scopus 로고    scopus 로고
    • Genomic changes during chronic Helicobacter pylori infection
    • Kraft C, Stack A, Josenhans C, Niehus E, Dietrich G, et al. (2006) Genomic changes during chronic Helicobacter pylori infection. J Bacteriol 188: 249-254.
    • (2006) J Bacteriol , vol.188 , pp. 249-254
    • Kraft, C.1    Stack, A.2    Josenhans, C.3    Niehus, E.4    Dietrich, G.5
  • 45
    • 1442325311 scopus 로고    scopus 로고
    • Increased frequency of genomic alterations in Staphylococcus aureus during chronic infection is in part due to phage mobilization
    • Goerke C, Matias y Papenberg S, Dasbach S, Dietz K, Ziebach R, et al. (2004) Increased frequency of genomic alterations in Staphylococcus aureus during chronic infection is in part due to phage mobilization. J Infect Dis 189: 724-734.
    • (2004) J Infect Dis , vol.189 , pp. 724-734
    • Goerke, C.1    Matias y Papenberg, S.2    Dasbach, S.3    Dietz, K.4    Ziebach, R.5
  • 47
    • 34249733688 scopus 로고    scopus 로고
    • Shiga toxin gene loss and transfer in vitro and in vivo during enterohemorrhagic Escherichia coli O26 infection in humans
    • Bielaszewska M, Prager R, Kock R, Mellmann A, Zhang W, et al. (2007) Shiga toxin gene loss and transfer in vitro and in vivo during enterohemorrhagic Escherichia coli O26 infection in humans. Appl Environ Microbiol 73: 3144-3150.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 3144-3150
    • Bielaszewska, M.1    Prager, R.2    Kock, R.3    Mellmann, A.4    Zhang, W.5
  • 48
    • 34250807060 scopus 로고    scopus 로고
    • Prevalence, virulence profiles, and clinical significance of Shiga toxin-negative variants of enterohemorrhagic Escherichia coli O157 infection in humans
    • Friedrich AW, Zhang W, Bielaszewska M, Mellmann A, Kock R, et al. (2007) Prevalence, virulence profiles, and clinical significance of Shiga toxin-negative variants of enterohemorrhagic Escherichia coli O157 infection in humans. Clin Infect Dis 45: 39-45.
    • (2007) Clin Infect Dis , vol.45 , pp. 39-45
    • Friedrich, A.W.1    Zhang, W.2    Bielaszewska, M.3    Mellmann, A.4    Kock, R.5
  • 49
    • 0021825282 scopus 로고
    • The diarrheal response of humans to some classic serotypes of enteropathogenic Escherichia coli is dependent on a plasmid encoding an enteroadhesiveness factor
    • Levine MM, Nataro JP, Karch H, Baldini MM, Kaper JB, et al. (1985) The diarrheal response of humans to some classic serotypes of enteropathogenic Escherichia coli is dependent on a plasmid encoding an enteroadhesiveness factor. J Infect Dis 152: 550-559.
    • (1985) J Infect Dis , vol.152 , pp. 550-559
    • Levine, M.M.1    Nataro, J.P.2    Karch, H.3    Baldini, M.M.4    Kaper, J.B.5
  • 50
    • 23744459355 scopus 로고    scopus 로고
    • Enterohemorrhagic Escherichia coli in human infection: in vivo evolution of a bacterial pathogen
    • Mellmann A, Bielaszewska M, Zimmerhackl LB, Prager R, Harmsen D, et al. (2005) Enterohemorrhagic Escherichia coli in human infection: in vivo evolution of a bacterial pathogen. Clin Infect Dis 41: 785-792.
    • (2005) Clin Infect Dis , vol.41 , pp. 785-792
    • Mellmann, A.1    Bielaszewska, M.2    Zimmerhackl, L.B.3    Prager, R.4    Harmsen, D.5
  • 51
    • 53549102749 scopus 로고    scopus 로고
    • Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways
    • Thomson NR, Clayton DJ, Windhorst D, Vernikos G, Davidson S, et al. (2008) Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways. Genome Res 18: 1624-1637.
    • (2008) Genome Res , vol.18 , pp. 1624-1637
    • Thomson, N.R.1    Clayton, D.J.2    Windhorst, D.3    Vernikos, G.4    Davidson, S.5
  • 52
    • 63049116302 scopus 로고    scopus 로고
    • Pseudogene accumulation in the evolutionary histories of Salmonella enterica serovars Paratyphi A and Typhi
    • Holt KE, Thomson NR, Wain J, Langridge GC, Hasan R, et al. (2009) Pseudogene accumulation in the evolutionary histories of Salmonella enterica serovars Paratyphi A and Typhi. BMC Genomics 10: 36.
    • (2009) BMC Genomics , vol.10 , pp. 36
    • Holt, K.E.1    Thomson, N.R.2    Wain, J.3    Langridge, G.C.4    Hasan, R.5
  • 54
    • 0042355274 scopus 로고    scopus 로고
    • Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica
    • Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, et al. (2003) Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nat Genet 35: 32-40.
    • (2003) Nat Genet , vol.35 , pp. 32-40
    • Parkhill, J.1    Sebaihia, M.2    Preston, A.3    Murphy, L.D.4    Thomson, N.5
  • 55
    • 67651089508 scopus 로고    scopus 로고
    • Improved protocols for the Illumina Genome Analyzer sequencing system
    • Quail MA, Swerdlow H, Turner DJ, (2009) Improved protocols for the Illumina Genome Analyzer sequencing system. Curr Protoc Hum Genet 62: 18.2.1-18.2.27.
    • (2009) Curr Protoc Hum Genet , vol.62 , pp. 1-27
    • Quail, M.A.1    Swerdlow, H.2    Turner, D.J.3
  • 56
    • 67650735586 scopus 로고    scopus 로고
    • ABACAS: algorithm-based automatic contiguation of assembled sequences
    • Assefa S, Keane TM, Otto TD, Newbold C, Berriman M, (2009) ABACAS: algorithm-based automatic contiguation of assembled sequences. Bioinformatics 25: 1968-1969.
    • (2009) Bioinformatics , vol.25 , pp. 1968-1969
    • Assefa, S.1    Keane, T.M.2    Otto, T.D.3    Newbold, C.4    Berriman, M.5
  • 58
    • 0034764307 scopus 로고    scopus 로고
    • SSAHA: a fast search method for large DNA databases
    • Ning Z, Cox AJ, Mullikin JC, (2001) SSAHA: a fast search method for large DNA databases. Genome Res 11: 1725-1729.
    • (2001) Genome Res , vol.11 , pp. 1725-1729
    • Ning, Z.1    Cox, A.J.2    Mullikin, J.C.3
  • 59
    • 75649084906 scopus 로고    scopus 로고
    • Evolution of MRSA during hospital transmission and intercontinental spread
    • Harris SR, Feil EJ, Holden MT, Quail MA, Nickerson EK, et al. (2010) Evolution of MRSA during hospital transmission and intercontinental spread. Science 327: 469-474.
    • (2010) Science , vol.327 , pp. 469-474
    • Harris, S.R.1    Feil, E.J.2    Holden, M.T.3    Quail, M.A.4    Nickerson, E.K.5
  • 60
    • 77949646852 scopus 로고    scopus 로고
    • BamView: viewing mapped read alignment data in the context of the reference sequence
    • Carver T, Bohme U, Otto TD, Parkhill J, Berriman M, (2010) BamView: viewing mapped read alignment data in the context of the reference sequence. Bioinformatics 26: 676-677.
    • (2010) Bioinformatics , vol.26 , pp. 676-677
    • Carver, T.1    Bohme, U.2    Otto, T.D.3    Parkhill, J.4    Berriman, M.5
  • 61
    • 0019433725 scopus 로고
    • Rapid procedure for detection and isolation of large and small plasmids
    • Kado CI, Liu ST, (1981) Rapid procedure for detection and isolation of large and small plasmids. J Bacteriol 145: 1365-1373.
    • (1981) J Bacteriol , vol.145 , pp. 1365-1373
    • Kado, C.I.1    Liu, S.T.2
  • 64
    • 29244449352 scopus 로고    scopus 로고
    • A GntR family transcriptional regulator (PigT) controls gluconate-mediated repression and defines a new, independent pathway for regulation of the tripyrrole antibiotic, prodigiosin, in Serratia
    • Fineran PC, Everson L, Slater H, Salmond GP, (2005) A GntR family transcriptional regulator (PigT) controls gluconate-mediated repression and defines a new, independent pathway for regulation of the tripyrrole antibiotic, prodigiosin, in Serratia. Microbiology 151: 3833-3845.
    • (2005) Microbiology , vol.151 , pp. 3833-3845
    • Fineran, P.C.1    Everson, L.2    Slater, H.3    Salmond, G.P.4
  • 65
    • 22744453986 scopus 로고    scopus 로고
    • Emergence of a 'hyperinfectious' bacterial state after passage of Citrobacter rodentium through the host gastrointestinal tract
    • Wiles S, Dougan G, Frankel G, (2005) Emergence of a 'hyperinfectious' bacterial state after passage of Citrobacter rodentium through the host gastrointestinal tract. Cell Microbiol 7: 1163-1172.
    • (2005) Cell Microbiol , vol.7 , pp. 1163-1172
    • Wiles, S.1    Dougan, G.2    Frankel, G.3
  • 66
    • 14044263540 scopus 로고    scopus 로고
    • Organ-specificity, colonization and clearance dynamics in vivo following oral challenges with the murine pathogen Citrobacter rodentium
    • Wiles S, Clare S, Harker J, Huett A, Young D, et al. (2005) Organ-specificity, colonization and clearance dynamics in vivo following oral challenges with the murine pathogen Citrobacter rodentium. Cell Microbiol 7: 459.
    • (2005) Cell Microbiol , vol.7 , pp. 459
    • Wiles, S.1    Clare, S.2    Harker, J.3    Huett, A.4    Young, D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.