메뉴 건너뛰기




Volumn 81, Issue 7, 2015, Pages 2474-2480

Multilocus sequence typing of Leuconostoc gelidum subsp. gasicomitatum, a psychrotrophic lactic acid bacterium causing spoilage of packaged perishable foods

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; ECOLOGY; ELECTROPHORESIS; FOOD MICROBIOLOGY; FOOD PRODUCTS; LACTIC ACID; MEATS; MODIFIED ATMOSPHERE PACKAGING; VEGETABLES;

EID: 84925358118     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.04013-14     Document Type: Article
Times cited : (12)

References (34)
  • 1
    • 84897938808 scopus 로고    scopus 로고
    • Reclassification of Leuconostoc gasicomitatum into the species Leuconostoc gelidum and description of Leuconostoc gelidum subsp. gelidum subsp. nov., Leuconostoc gelidum subsp. gasicomitatum subsp. nov., and Leuconostoc gelidum subsp. aenigmaticum subsp. nov
    • Rahkila R, De Bruyne K, Johansson P, Vandamme P, Björkroth J. 2014. Reclassification of Leuconostoc gasicomitatum into the species Leuconostoc gelidum and description of Leuconostoc gelidum subsp. gelidum subsp. nov., Leuconostoc gelidum subsp. gasicomitatum subsp. nov., and Leuconostoc gelidum subsp. aenigmaticum subsp. nov. Int J Syst Microbiol 64: 1290-1295. http://dx.doi.org/10.1099/ijs.0.058263-0.
    • (2014) Int J Syst Microbiol , vol.64 , pp. 1290-1295
    • Rahkila, R.1    De Bruyne, K.2    Johansson, P.3    Vandamme, P.4    Björkroth, J.5
  • 2
    • 0033827516 scopus 로고    scopus 로고
    • Characterization of Leuconostoc gasicomitatum sp. nov., associated with spoiled raw tomato-marinated broiler meat strips packaged under modified-atmosphere conditions
    • Björkroth K, Geisen R, Schillinger U, Weiss N, De Vos P, Holzapfel W, Korkeala H, Vandamme P. 2000. Characterization of Leuconostoc gasicomitatum sp. nov., associated with spoiled raw tomato-marinated broiler meat strips packaged under modified-atmosphere conditions. Appl Environ Microbiol 66:3764-3772. http://dx.doi.org/10.1128/AEM.66.9.3764-3772.2000.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 3764-3772
    • Björkroth, K.1    Geisen, R.2    Schillinger, U.3    Weiss, N.4    De Vos, P.5    Holzapfel, W.6    Korkeala, H.7    Vandamme, P.8
  • 3
    • 36048981808 scopus 로고    scopus 로고
    • Spoilage of value-added, high-oxygen modified-atmosphere packaged raw beef steaks by Leuconostoc gasicomitatum and Leuconostoc gelidum
    • Vihavainen E, Björkroth KJ. 2007. Spoilage of value-added, high-oxygen modified-atmosphere packaged raw beef steaks by Leuconostoc gasicomitatum and Leuconostoc gelidum. Int J Food Microbiol 119:340-345. http: //dx.doi.org/10.1016/j.ijfoodmicro.2007.08.029.
    • (2007) Int J Food Microbiol , vol.119 , pp. 340-345
    • Vihavainen, E.1    Björkroth, K.J.2
  • 4
    • 78650010623 scopus 로고    scopus 로고
    • Characterization of psychrotrophic bacterial communities in modified atmosphere-packed meat with terminal restriction fragment length polymorphism
    • Nieminen TT, Vihavainen E, Paloranta A, Lehto J, Paulin L, Auvinen P, Solismaa M, Björkroth KJ. 2011. Characterization of psychrotrophic bacterial communities in modified atmosphere-packed meat with terminal restriction fragment length polymorphism. Int J Food Microbiol 144: 360-366. http://dx.doi.org/10.1016/j.ijfoodmicro.2010.10.018.
    • (2011) Int J Food Microbiol , vol.144 , pp. 360-366
    • Nieminen, T.T.1    Vihavainen, E.2    Paloranta, A.3    Lehto, J.4    Paulin, L.5    Auvinen, P.6    Solismaa, M.7    Björkroth, K.J.8
  • 5
    • 0347301679 scopus 로고    scopus 로고
    • Leuconostoc gelidum and Leuconostoc gasicomitatum strains dominated the lactic acid bacterium population associated with strong slime formation in an acetic-acid herring preserve
    • Lyhs U, Koort J, Lundström HS, Björkroth J. 2004. Leuconostoc gelidum and Leuconostoc gasicomitatum strains dominated the lactic acid bacterium population associated with strong slime formation in an acetic-acid herring preserve. Int J Food Microbiol 90:207-218. http://dx.doi.org/10.1016/S0168-1605(03)00303-9.
    • (2004) Int J Food Microbiol , vol.90 , pp. 207-218
    • Lyhs, U.1    Koort, J.2    Lundström, H.S.3    Björkroth, J.4
  • 6
    • 55849128171 scopus 로고    scopus 로고
    • Leuconostoc spoilage of vacuum-packaged vegetable sausages
    • Vihavainen E, Murros A, Björkroth J. 2008. Leuconostoc spoilage of vacuum-packaged vegetable sausages. J Food Prot 71:2312-2315.
    • (2008) J Food Prot , vol.71 , pp. 2312-2315
    • Vihavainen, E.1    Murros, A.2    Björkroth, J.3
  • 7
    • 84907560784 scopus 로고    scopus 로고
    • Psychrotrophic lactic acid bacteria associated with production batch recalls and sporadic cases of early spoilage in Belgium between 2010 and 2014
    • Pothakos V, Taminiau B, Huys G, Nezer C, Daube G, Devlieghere F. 2014. Psychrotrophic lactic acid bacteria associated with production batch recalls and sporadic cases of early spoilage in Belgium between 2010 and 2014. Int J Food Microbiol 191:157-163. http://dx.doi.org/10.1016/j.ijfoodmicro.2014.09.013.
    • (2014) Int J Food Microbiol , vol.191 , pp. 157-163
    • Pothakos, V.1    Taminiau, B.2    Huys, G.3    Nezer, C.4    Daube, G.5    Devlieghere, F.6
  • 8
    • 84902248144 scopus 로고    scopus 로고
    • Monitoring psychrotrophic lactic acid bacteria contamination in a readyto-eat vegetable salad production environment
    • Pothakos V, Snauwaert C, De Vos P, Huys G, Devlieghere F. 2014. Monitoring psychrotrophic lactic acid bacteria contamination in a readyto-eat vegetable salad production environment. Int J Food Microbiol 185: 7-16. http://dx.doi.org/10.1016/j.ijfoodmicro.2014.05.009.
    • (2014) Int J Food Microbiol , vol.185 , pp. 7-16
    • Pothakos, V.1    Snauwaert, C.2    De Vos, P.3    Huys, G.4    Devlieghere, F.5
  • 9
    • 84888423636 scopus 로고    scopus 로고
    • Psychrotrophic members of Leuconostoc gasicomitatum, Leuconostoc gelidum, and Lactococcus piscium dominate at the end of shelf-life in packaged and chilled-stored food products in Belgium
    • Pothakos V, Snauwaert C, De Vos P, Huys G, Devlieghere F. 2014. Psychrotrophic members of Leuconostoc gasicomitatum, Leuconostoc gelidum, and Lactococcus piscium dominate at the end of shelf-life in packaged and chilled-stored food products in Belgium. Food Microbiol 39:61-67. http://dx.doi.org/10.1016/j.fm.2013.11.005.
    • (2014) Food Microbiol , vol.39 , pp. 61-67
    • Pothakos, V.1    Snauwaert, C.2    De Vos, P.3    Huys, G.4    Devlieghere, F.5
  • 10
    • 70350334365 scopus 로고    scopus 로고
    • Diversity of Leuconostoc gasicomitatum associated with meat spoilage
    • Vihavainen E, Björkroth J. 2009. Diversity of Leuconostoc gasicomitatum associated with meat spoilage. Int J Food Microbiol 136:32-36. http://dx.doi.org/10.1016/j.ijfoodmicro.2009.09.010.
    • (2009) Int J Food Microbiol , vol.136 , pp. 32-36
    • Vihavainen, E.1    Björkroth, J.2
  • 11
    • 79960089441 scopus 로고    scopus 로고
    • Genome sequence of a food spoilage lactic acid bacterium, Leuconostoc gasicomitatum LMG 18811T, in association with specific spoilage reactions
    • Johansson P, Paulin L, Säde E, Salovuori N, Alatalo E, Björkroth J, Auvinen P. 2011. Genome sequence of a food spoilage lactic acid bacterium, Leuconostoc gasicomitatum LMG 18811T, in association with specific spoilage reactions. Appl Environ Microbiol 77:4344-4351. http://dx.doi.org/10.1128/AEM.00102-11.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 4344-4351
    • Johansson, P.1    Paulin, L.2    Säde, E.3    Salovuori, N.4    Alatalo, E.5    Björkroth, J.6    Auvinen, P.7
  • 12
    • 0024553747 scopus 로고
    • Rapid extraction of bacterial genomic DNA with guanidium thiocyanate
    • Pitcher DG, Saunders NA, Owen RJ. 1989. Rapid extraction of bacterial genomic DNA with guanidium thiocyanate. Lett Appl Microbiol 8:151-156. http://dx.doi.org/10.1111/j.1472-765X.1989.tb00262.x.
    • (1989) Lett Appl Microbiol , vol.8 , pp. 151-156
    • Pitcher, D.G.1    Saunders, N.A.2    Owen, R.J.3
  • 13
    • 0030197557 scopus 로고    scopus 로고
    • rRNA gene restriction patterns as a characterization tool for Lactobacillus sake strains producing ropy slime
    • Björkroth J, Korkeala H. 1996. rRNA gene restriction patterns as a characterization tool for Lactobacillus sake strains producing ropy slime. Int J Food Microbiol 30:293-302. http://dx.doi.org/10.1016/0168-1605(96)00 955-5.
    • (1996) Int J Food Microbiol , vol.30 , pp. 293-302
    • Björkroth, J.1    Korkeala, H.2
  • 14
    • 0037100671 scopus 로고    scopus 로고
    • MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
    • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 30:3059-3066. http://dx.doi.org/10.1093/nar/gkf436.
    • (2002) Nucleic Acids Res , vol.30 , pp. 3059-3066
    • Katoh, K.1    Misawa, K.2    Kuma, K.3    Miyata, T.4
  • 15
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
    • Librado P, Rozas J. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451-1452. http://dx.doi.org/10.1093/bioinformatics/btp187.
    • (2009) Bioinformatics , vol.25 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 16
    • 67650093575 scopus 로고    scopus 로고
    • Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach
    • Francisco AP, Bugalho M, Ramirez M, Carrico JA. 2009. Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach. BMC Bioinformatics 10:152. http://dx.doi.org/10.1186/1471-2105-10-152.
    • (2009) BMC Bioinformatics , vol.10 , pp. 152
    • Francisco, A.P.1    Bugalho, M.2    Ramirez, M.3    Carrico, J.A.4
  • 17
    • 84865286374 scopus 로고    scopus 로고
    • PHYLOVIZ: phylogenetic inference and data visualization for sequence based typing methods
    • Francisco A, Vaz C, Monteiro P, Melo-Cristino J, Ramirez M, Carrico J. 2012. PHYLOVIZ: phylogenetic inference and data visualization for sequence based typing methods. Bioinformatics 13:87. http://dx.doi.org /10.1186/1471-2105-13-87.
    • (2012) Bioinformatics , vol.13 , pp. 87
    • Francisco, A.1    Vaz, C.2    Monteiro, P.3    Melo-Cristino, J.4    Ramirez, M.5    Carrico, J.6
  • 18
    • 0037274702 scopus 로고    scopus 로고
    • Bayesian analysis of genetic differentiation between populations
    • Corander J, Waldmann P, Sillanpää MJ. 2003. Bayesian analysis of genetic differentiation between populations. Genetics 163:367-374.
    • (2003) Genetics , vol.163 , pp. 367-374
    • Corander, J.1    Waldmann, P.2    Sillanpää, M.J.3
  • 19
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D, Crandall K. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818. http://dx.doi.org/10.1093/bioinfor matics/14.9.817.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.2
  • 20
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O. 2003. A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696-704. http://dx.doi.org/10.1080/10635150390235520.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 21
    • 77949505988 scopus 로고    scopus 로고
    • PALM: a paralleled and integrated framework for phylogenetic inference with automatic likelihood model selectors
    • Chen SH, Su SY, Lo CZ, Chen KH, Huang TJ, Ku BH, Lin CY. 2009. PALM: a paralleled and integrated framework for phylogenetic inference with automatic likelihood model selectors. PLoS One 4:e8116. http://dx.doi.org/10.1371/journal.pone.0008116.
    • (2009) PLoS One , vol.4
    • Chen, S.H.1    Su, S.Y.2    Lo, C.Z.3    Chen, K.H.4    Huang, T.J.5    Ku, B.H.6    Lin, C.Y.7
  • 22
    • 34249027580 scopus 로고    scopus 로고
    • Inference of bacterial microevolution using multilocus sequence data
    • Didelot X, Falush D. 2007. Inference of bacterial microevolution using multilocus sequence data. Genetics 175:1251-1266. http://dx.doi.org/10.1534/genetics.106.063305.
    • (2007) Genetics , vol.175 , pp. 1251-1266
    • Didelot, X.1    Falush, D.2
  • 23
    • 84972492387 scopus 로고
    • Inference from iterative simulation using multiple sequences
    • Gelman A, Rubin D. 1992. Inference from iterative simulation using multiple sequences. Statist Sci 7:457-472. http://dx.doi.org/10.1214/ss /1177011136.
    • (1992) Statist Sci , vol.7 , pp. 457-472
    • Gelman, A.1    Rubin, D.2
  • 24
    • 84902178123 scopus 로고    scopus 로고
    • High genetic diversity among strains of the unindustrialized lactic acid bacterium Carnobacterium maltaromaticum in dairy products as revealed by multilocus sequence typing
    • Rahman A, Cailliez-Grimal C, Bontemps C, Payot S, Chaillou S, Revol-Junelles AM, Borges F. 2014. High genetic diversity among strains of the unindustrialized lactic acid bacterium Carnobacterium maltaromaticum in dairy products as revealed by multilocus sequence typing. Appl Environ Microbiol 80:3920-3929. http://dx.doi.org/10.1128/AEM.00681-14.
    • (2014) Appl Environ Microbiol , vol.80 , pp. 3920-3929
    • Rahman, A.1    Cailliez-Grimal, C.2    Bontemps, C.3    Payot, S.4    Chaillou, S.5    Revol-Junelles, A.M.6    Borges, F.7
  • 25
    • 34249745345 scopus 로고    scopus 로고
    • Assessing the reliability of eBurst using simulated populations with known ancestry
    • Turner K, Hanage W, Fraser C, Connor T, Spratt B. 2007. Assessing the reliability of eBurst using simulated populations with known ancestry. BMC Microbiol 7:30. http://dx.doi.org/10.1186/1471-2180-7-30.
    • (2007) BMC Microbiol , vol.7 , pp. 30
    • Turner, K.1    Hanage, W.2    Fraser, C.3    Connor, T.4    Spratt, B.5
  • 26
    • 0000776602 scopus 로고    scopus 로고
    • Evaluation of Lactobacillus sake contamination in vacuum-packaged sliced cooked meat products by ribotyping
    • Björkroth K, Korkeala H. 1996. Evaluation of Lactobacillus sake contamination in vacuum-packaged sliced cooked meat products by ribotyping. J Food Prot 59:398-401.
    • (1996) J Food Prot , vol.59 , pp. 398-401
    • Björkroth, K.1    Korkeala, H.2
  • 27
    • 0343036272 scopus 로고    scopus 로고
    • Use of rRNA gene restriction patterns to evaluate lactic acid bacterium contamination of vacuum-packaged sliced cooked whole-meat product in a meat processing plant
    • Björkroth K, Korkeala H. 1997. Use of rRNA gene restriction patterns to evaluate lactic acid bacterium contamination of vacuum-packaged sliced cooked whole-meat product in a meat processing plant. Appl Environ Microbiol 63:448-453.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 448-453
    • Björkroth, K.1    Korkeala, H.2
  • 28
    • 33847192508 scopus 로고    scopus 로고
    • Role of broiler carcasses and processing plant air in contamination of modified-atmosphere-packaged broiler products with psychrotrophic lactic acid bacteria
    • Vihavainen E, Lundström H, Susiluoto T, Koort J, Paulin L, Auvinen P, Björkroth KJ. 2007. Role of broiler carcasses and processing plant air in contamination of modified-atmosphere-packaged broiler products with psychrotrophic lactic acid bacteria. Appl Environ Microbiol 73:1136-1145. http://dx.doi.org/10.1128/AEM.01644-06.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 1136-1145
    • Vihavainen, E.1    Lundström, H.2    Susiluoto, T.3    Koort, J.4    Paulin, L.5    Auvinen, P.6    Björkroth, K.J.7
  • 29
    • 84880809968 scopus 로고    scopus 로고
    • Exploring the sources of bacterial spoilers in beefsteaks by culture-independent high-throughput sequencing
    • De Filippis F, La Storia A, Villani F, Ercolini D. 2013. Exploring the sources of bacterial spoilers in beefsteaks by culture-independent high-throughput sequencing. PLoS One 8:e70222. http://dx.doi.org/10.1371 /journal.pone.0070222.
    • (2013) PLoS One , vol.8
    • De Filippis, F.1    La Storia, A.2    Villani, F.3    Ercolini, D.4
  • 30
    • 84884381841 scopus 로고    scopus 로고
    • Population genetics of Lactobacillus sakei reveals three lineages with distinct evolutionary histories
    • Chaillou S, Lucquin I, Najjari A, Zagorec M, Champomier-Verges MC. 2013. Population genetics of Lactobacillus sakei reveals three lineages with distinct evolutionary histories. PLoS One 8:e73253. http://dx.doi.org/10.1371/journal.pone.0073253.
    • (2013) PLoS One , vol.8
    • Chaillou, S.1    Lucquin, I.2    Najjari, A.3    Zagorec, M.4    Champomier-Verges, M.C.5
  • 31
    • 78650323378 scopus 로고    scopus 로고
    • Evidence of distinct populations and specific subpopulations within the species Oenococcus oeni
    • Bridier J, Claisse O, Coton M, Coton E, Lonvaud-Funel A. 2010. Evidence of distinct populations and specific subpopulations within the species Oenococcus oeni. Appl Environ Microbiol 76:7754-7764. http://dx.doi.org/10.1128/AEM.01544-10.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 7754-7764
    • Bridier, J.1    Claisse, O.2    Coton, M.3    Coton, E.4    Lonvaud-Funel, A.5
  • 32
    • 58549084151 scopus 로고    scopus 로고
    • A comparison of homologous recombination rates in bacteria and archaea
    • Vos M, Didelot X. 2009. A comparison of homologous recombination rates in bacteria and archaea. ISME J 3:199-208. http://dx.doi.org/10.1038 /ismej.2008.93.
    • (2009) ISME J , vol.3 , pp. 199-208
    • Vos, M.1    Didelot, X.2
  • 33
    • 84903273178 scopus 로고    scopus 로고
    • A novel multi-locus sequence typing (MLST) protocol for Leuconostoc lactis isolates from traditional dairy products in China and Mongolia
    • Dan T, Liu W, Sun Z, Lv Q, Xu H, Song Y, Zhang H. 2014. A novel multi-locus sequence typing (MLST) protocol for Leuconostoc lactis isolates from traditional dairy products in China and Mongolia. BMC Microbiol 14:150. http://dx.doi.org/10.1186/1471-2180-14-150.
    • (2014) BMC Microbiol , vol.14 , pp. 150
    • Dan, T.1    Liu, W.2    Sun, Z.3    Lv, Q.4    Xu, H.5    Song, Y.6    Zhang, H.7
  • 34
    • 75549086595 scopus 로고    scopus 로고
    • REBASE-a database for DNA restriction and modification: enzymes, genes and genomes
    • Roberts R, Vincze T, Posfai J, Maceli D. 2010. REBASE-a database for DNA restriction and modification: enzymes, genes and genomes. Nucleic Acid Res 38:D234-D236. http://dx.doi.org/10.1093/nar/gkp874.
    • (2010) Nucleic Acid Res , vol.38 , pp. D234-D236
    • Roberts, R.1    Vincze, T.2    Posfai, J.3    Maceli, D.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.