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Volumn 10, Issue 3, 2015, Pages 844-854

Consequences of periodic α-to-β3 residue replacement for immunological recognition of peptide epitopes

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; ANTIBODY; BOVINE IMMUNOGLOBULIN; EPITOPE; GAMMA INTERFERON; HAPTEN; PEPTIDE; PHOSPHOLIPASE; POLYCLONAL ANTIBODY; POLYPEPTIDE; PROTEIN BCL 2; T LYMPHOCYTE RECEPTOR; APOPTOSIS REGULATORY PROTEIN; BCL2L11 PROTEIN, HUMAN; BIM PROTEIN; LYMPHOCYTE ANTIGEN RECEPTOR; MEMBRANE PROTEIN; OLIGOPEPTIDE; ONCOPROTEIN; PHOSPHOLIPASE A2; PROTEIN BINDING; VIRUS ANTIGEN;

EID: 84925355896     PISSN: 15548929     EISSN: 15548937     Source Type: Journal    
DOI: 10.1021/cb500888q     Document Type: Article
Times cited : (20)

References (43)
  • 1
    • 0032489015 scopus 로고    scopus 로고
    • The cell as a collection of protein machines: Preparing the next generation of molecular biologists
    • Alberts, B. (1998) The cell as a collection of protein machines: Preparing the next generation of molecular biologists Cell 92, 291-294
    • (1998) Cell , vol.92 , pp. 291-294
    • Alberts, B.1
  • 2
    • 0034614490 scopus 로고    scopus 로고
    • Signaling - 2000 and beyond
    • Hunter, T. (2000) Signaling - 2000 and beyond Cell 100, 113-127
    • (2000) Cell , vol.100 , pp. 113-127
    • Hunter, T.1
  • 3
    • 33847276695 scopus 로고    scopus 로고
    • In search of partners: Linking extracellular proteases to substrates
    • Overall, C. M. and Blobel, C. P. (2007) In search of partners: Linking extracellular proteases to substrates Nat. Rev. Mol. Cell Biol. 8, 245-257
    • (2007) Nat. Rev. Mol. Cell Biol. , vol.8 , pp. 245-257
    • Overall, C.M.1    Blobel, C.P.2
  • 6
    • 37249004920 scopus 로고    scopus 로고
    • Reaching for high-hanging fruit in drug discovery at protein-protein interfaces
    • Wells, J. A. and McClendon, C. L. (2007) Reaching for high-hanging fruit in drug discovery at protein-protein interfaces Nature 450, 1001-1009
    • (2007) Nature , vol.450 , pp. 1001-1009
    • Wells, J.A.1    McClendon, C.L.2
  • 7
    • 37749004225 scopus 로고    scopus 로고
    • Protein therapeutics: A summary and pharmacological classification
    • Leader, B., Baca, Q. J., and Golan, D. E. (2008) Protein therapeutics: A summary and pharmacological classification Nat. Rev. Drug Discovery 7, 21-39
    • (2008) Nat. Rev. Drug Discovery , vol.7 , pp. 21-39
    • Leader, B.1    Baca, Q.J.2    Golan, D.E.3
  • 8
    • 84885229737 scopus 로고    scopus 로고
    • Pharmacokinetics and pharmacokinetic-pharmacodynamic correlations of therapeutic peptides
    • Diao, L. and Meibohm, B. (2013) Pharmacokinetics and pharmacokinetic-pharmacodynamic correlations of therapeutic peptides Clin. Pharmacokinet. 52, 855-868
    • (2013) Clin. Pharmacokinet. , vol.52 , pp. 855-868
    • Diao, L.1    Meibohm, B.2
  • 11
    • 36549056638 scopus 로고    scopus 로고
    • Benzoylurea oligomers: Synthetic foldamers that mimic extended α helices
    • Rodriguez, J. M. and Hamilton, A. D. (2007) Benzoylurea oligomers: Synthetic foldamers that mimic extended α helices Angew. Chem., Int. Ed. 46, 8614-8617
    • (2007) Angew. Chem., Int. Ed. , vol.46 , pp. 8614-8617
    • Rodriguez, J.M.1    Hamilton, A.D.2
  • 12
    • 17344384874 scopus 로고    scopus 로고
    • Antibiotics - Non-haemolytic β-amino-acid oligomers
    • Porter, E. A., Wang, X. F., Lee, H. S., Weisblum, B., and Gellman, S. H. (2000) Antibiotics - Non-haemolytic β-amino-acid oligomers Nature 404, 565-565
    • (2000) Nature , vol.404 , pp. 565-565
    • Porter, E.A.1    Wang, X.F.2    Lee, H.S.3    Weisblum, B.4    Gellman, S.H.5
  • 13
    • 84860877508 scopus 로고    scopus 로고
    • Extending foldamer design beyond α-helix mimicry: α/β-Peptide inhibitors of vascular endothelial growth factor signaling
    • Haase, H. S., Peterson-Kaufman, K. J., Levengood, S. K. L., Checco, J. W., Murphy, W. L., and Gellman, S. H. (2012) Extending foldamer design beyond α-helix mimicry: α/β-Peptide inhibitors of vascular endothelial growth factor signaling J. Am. Chem. Soc. 134, 7652-7655
    • (2012) J. Am. Chem. Soc. , vol.134 , pp. 7652-7655
    • Haase, H.S.1    Peterson-Kaufman, K.J.2    Levengood, S.K.L.3    Checco, J.W.4    Murphy, W.L.5    Gellman, S.H.6
  • 14
    • 84903964236 scopus 로고    scopus 로고
    • Backbone modification of a polypeptide drug produces analogs with altered duration of action in vivo
    • Cheloha, R. C., Maeda, A., Dean, T., Gardella, T. J., and Gellman, S. H. (2014) Backbone modification of a polypeptide drug produces analogs with altered duration of action in vivo Nat. Biotechnol. 32, 653-655
    • (2014) Nat. Biotechnol. , vol.32 , pp. 653-655
    • Cheloha, R.C.1    Maeda, A.2    Dean, T.3    Gardella, T.J.4    Gellman, S.H.5
  • 16
    • 84874040996 scopus 로고    scopus 로고
    • α-Helix mimicry with α/β-peptides
    • Johnson, L. M. and Gellman, S. H. (2013) α-Helix mimicry with α/β-peptides Method Enzymol. 523, 407-429
    • (2013) Method Enzymol. , vol.523 , pp. 407-429
    • Johnson, L.M.1    Gellman, S.H.2
  • 17
    • 42249109845 scopus 로고    scopus 로고
    • Sequence-based design of α/β-peptide foldamers that mimic BH3 domains
    • Horne, W. S., Boersma, M. D., Windsor, M. A., and Gellman, S. H. (2008) Sequence-based design of α/β-peptide foldamers that mimic BH3 domains Angew. Chem., Int. Ed. 47, 2853-2856
    • (2008) Angew. Chem., Int. Ed. , vol.47 , pp. 2853-2856
    • Horne, W.S.1    Boersma, M.D.2    Windsor, M.A.3    Gellman, S.H.4
  • 18
    • 48249119196 scopus 로고    scopus 로고
    • Interplay among side chain sequence, backbone composition, and residue rigidification in polypeptide folding and assembly
    • Horne, W. S., Price, J. L., and Gellman, S. H. (2008) Interplay among side chain sequence, backbone composition, and residue rigidification in polypeptide folding and assembly Proc. Natl. Acad. Sci. U.S.A. 105, 9151-9156
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 9151-9156
    • Horne, W.S.1    Price, J.L.2    Gellman, S.H.3
  • 20
    • 0034609821 scopus 로고    scopus 로고
    • Melanoma peptide MART-1(27-35) analogues with enhanced binding capacity to the human class i histocompatibility molecule HLA-A2 by introduction of a β-amino acid residue: Implications for recognition by tumor-infiltrating lymphocytes
    • Guichard, G., Zerbib, A., Le Gal, F. A., Hoebeke, J., Connan, F., Choppin, J., Briand, J. P., and Guillet, J. G. (2000) Melanoma peptide MART-1(27-35) analogues with enhanced binding capacity to the human class I histocompatibility molecule HLA-A2 by introduction of a β-amino acid residue: Implications for recognition by tumor-infiltrating lymphocytes J. Med. Chem. 43, 3803-3808
    • (2000) J. Med. Chem. , vol.43 , pp. 3803-3808
    • Guichard, G.1    Zerbib, A.2    Le Gal, F.A.3    Hoebeke, J.4    Connan, F.5    Choppin, J.6    Briand, J.P.7    Guillet, J.G.8
  • 21
    • 0035816602 scopus 로고    scopus 로고
    • β-Amino acid scan of a Class i major histocompatibility complex-restricted alloreactive T-cell epitope
    • Reinelt, S., Marti, M., Dedier, S., Reitinger, T., Folkers, G., de Castro, J. A. L., and Rognan, D. (2001) β-Amino acid scan of a Class I major histocompatibility complex-restricted alloreactive T-cell epitope J. Biol. Chem. 276, 24525-24530
    • (2001) J. Biol. Chem. , vol.276 , pp. 24525-24530
    • Reinelt, S.1    Marti, M.2    Dedier, S.3    Reitinger, T.4    Folkers, G.5    De Castro, J.A.L.6    Rognan, D.7
  • 23
    • 33947186728 scopus 로고    scopus 로고
    • Heteroclitic properties of mixed α- And aza-β(3)-peptides mimicking a supradominant CD4 T cell epitope presented by nucleosome
    • Dali, H., Busnel, O., Hoebeke, J., Bi, L. R., Decker, P., Briand, J. P., Baudy-Floch, M., and Muller, S. (2007) Heteroclitic properties of mixed α- and aza-β(3)-peptides mimicking a supradominant CD4 T cell epitope presented by nucleosome Mol. Immunol. 44, 3024-3036
    • (2007) Mol. Immunol. , vol.44 , pp. 3024-3036
    • Dali, H.1    Busnel, O.2    Hoebeke, J.3    Bi, L.R.4    Decker, P.5    Briand, J.P.6    Baudy-Floch, M.7    Muller, S.8
  • 24
    • 79951918591 scopus 로고    scopus 로고
    • Peptidomimetics: Modifying peptides in the pursuit of better vaccines
    • Croft, N. P. and Purcell, A. W. (2011) Peptidomimetics: Modifying peptides in the pursuit of better vaccines Expert Rev. Vaccines 10, 211-226
    • (2011) Expert Rev. Vaccines , vol.10 , pp. 211-226
    • Croft, N.P.1    Purcell, A.W.2
  • 25
    • 80052563312 scopus 로고    scopus 로고
    • (E)-Alkene and ethylene isosteres substantially alter the hydrogen-bonding network in Class II MHC A(q)/glycopeptide complexes and affect T-cell recognition
    • Andersson, I. E., Batsalova, T., Haag, S., Dzhambazov, B., Holmdahl, R., Kihberg, J., and Linusson, A. (2011) (E)-Alkene and ethylene isosteres substantially alter the hydrogen-bonding network in Class II MHC A(q)/glycopeptide complexes and affect T-cell recognition J. Am. Chem. Soc. 133, 14368-14378
    • (2011) J. Am. Chem. Soc. , vol.133 , pp. 14368-14378
    • Andersson, I.E.1    Batsalova, T.2    Haag, S.3    Dzhambazov, B.4    Holmdahl, R.5    Kihberg, J.6    Linusson, A.7
  • 26
    • 84887971395 scopus 로고    scopus 로고
    • Engineering the polyproline II propensity of a Class II major histocompatibility complex ligand peptide
    • Unudurthi, S. D., Hotta, K., and Kim, C. Y. (2013) Engineering the polyproline II propensity of a Class II major histocompatibility complex ligand peptide ACS Chem. Biol. 8, 2383-2387
    • (2013) ACS Chem. Biol. , vol.8 , pp. 2383-2387
    • Unudurthi, S.D.1    Hotta, K.2    Kim, C.Y.3
  • 27
    • 0036728834 scopus 로고    scopus 로고
    • Distinct BH3 domains either sensitize or activate mitochondrial apoptosis, serving as prototype cancer therapeutics
    • Letai, A., Bassik, M. C., Walensky, L. D., Sorcinelli, M. D., Weiler, S., and Korsmeyer, S. J. (2002) Distinct BH3 domains either sensitize or activate mitochondrial apoptosis, serving as prototype cancer therapeutics Cancer Cell 2, 183-192
    • (2002) Cancer Cell , vol.2 , pp. 183-192
    • Letai, A.1    Bassik, M.C.2    Walensky, L.D.3    Sorcinelli, M.D.4    Weiler, S.5    Korsmeyer, S.J.6
  • 29
    • 66949176300 scopus 로고    scopus 로고
    • Egg yolk antibodies for detection and neutralization of Clostridium botulinum Type A neurotoxin
    • Trott, D. L., Yang, M., Gonzalez, J., Larson, A. E., Tepp, W. H., Johnson, E. A., and Cook, M. E. (2009) Egg yolk antibodies for detection and neutralization of Clostridium botulinum Type A neurotoxin J. Food. Protect. 72, 1005-1011
    • (2009) J. Food. Protect. , vol.72 , pp. 1005-1011
    • Trott, D.L.1    Yang, M.2    Gonzalez, J.3    Larson, A.E.4    Tepp, W.H.5    Johnson, E.A.6    Cook, M.E.7
  • 30
    • 0027167443 scopus 로고
    • A comparison of the immunogenicity of a pair of enantiomeric proteins
    • Dintzis, H. M., Symer, D. E., Dintzis, R. Z., Zawadzke, L. E., and Berg, J. M. (1993) A comparison of the immunogenicity of a pair of enantiomeric proteins Proteins 16, 306-308
    • (1993) Proteins , vol.16 , pp. 306-308
    • Dintzis, H.M.1    Symer, D.E.2    Dintzis, R.Z.3    Zawadzke, L.E.4    Berg, J.M.5
  • 31
    • 0034730372 scopus 로고    scopus 로고
    • Viral escape at the molecular level explained by quantitative T-cell receptor/peptide/MHC interactions and the crystal structure of a peptide/MHC complex
    • Tissot, A. C., Ciatto, C., Mittl, P. R. E., Grutter, M. G., and Pluckthun, A. (2000) Viral escape at the molecular level explained by quantitative T-cell receptor/peptide/MHC interactions and the crystal structure of a peptide/MHC complex J. Mol. Biol. 302, 873-885
    • (2000) J. Mol. Biol. , vol.302 , pp. 873-885
    • Tissot, A.C.1    Ciatto, C.2    Mittl, P.R.E.3    Grutter, M.G.4    Pluckthun, A.5
  • 32
  • 33
    • 0026781534 scopus 로고
    • Analysis of the association of peptides of optimal length to Class-I molecules on the surface of cells
    • Rock, K. L., Rothstein, L., and Benacerraf, B. (1992) Analysis of the association of peptides of optimal length to Class-I molecules on the surface of cells Proc. Natl. Acad. Sci. U.S.A. 89, 8918-8922
    • (1992) Proc. Natl. Acad. Sci. U.S.A. , vol.89 , pp. 8918-8922
    • Rock, K.L.1    Rothstein, L.2    Benacerraf, B.3
  • 35
    • 84880471966 scopus 로고    scopus 로고
    • Measurement of MHC/peptide interactions by gel filtration or monoclonal antibody capture
    • Chapter 18; Unit 18.3
    • Sidney, J., Southwood, S., Moore, C., Oseroff, C., Pinilla, C., Grey, H. M., and Sette, A. (2013) Measurement of MHC/peptide interactions by gel filtration or monoclonal antibody capture Curr. Protoc. Immunol. 10.1002/0471142735.im1803s100 Chapter 18; Unit 18.3
    • (2013) Curr. Protoc. Immunol.
    • Sidney, J.1    Southwood, S.2    Moore, C.3    Oseroff, C.4    Pinilla, C.5    Grey, H.M.6    Sette, A.7
  • 36
    • 18744375156 scopus 로고    scopus 로고
    • A structural basis for LCMV immune evasion: Subversion of H2-D(b) and H2-K(b) presentation of gp33 revealed by comparative crystal structure analyses
    • Achour, A., Michaelsson, J., Harris, R. A., Odeberg, J., Grufman, P., Sandberg, J. K., Levitsky, V., Karre, K., Sandalova, T., and Schneider, G. (2002) A structural basis for LCMV immune evasion: Subversion of H2-D(b) and H2-K(b) presentation of gp33 revealed by comparative crystal structure analyses Immunity 17, 757-768
    • (2002) Immunity , vol.17 , pp. 757-768
    • Achour, A.1    Michaelsson, J.2    Harris, R.A.3    Odeberg, J.4    Grufman, P.5    Sandberg, J.K.6    Levitsky, V.7    Karre, K.8    Sandalova, T.9    Schneider, G.10
  • 37
    • 0026728457 scopus 로고
    • Emerging principles for the recognition of peptide antigens by MHC Class-I molecules
    • Matsumura, M., Fremont, D. H., Peterson, P. A., and Wilson, I. A. (1992) Emerging principles for the recognition of peptide antigens by MHC Class-I molecules Science 257, 927-934
    • (1992) Science , vol.257 , pp. 927-934
    • Matsumura, M.1    Fremont, D.H.2    Peterson, P.A.3    Wilson, I.A.4
  • 39
    • 34248349946 scopus 로고    scopus 로고
    • The CD8(+) T-cell response to lymphocytic choriomeningitis virus involves the L antigen: Uncovering new tricks for an old virus
    • Kotturi, M. F., Peters, B., Buendia-Laysa, F., Sidney, J., Oseroff, C., Botten, J., Grey, H., Buchmeier, M. J., and Sette, A. (2007) The CD8(+) T-cell response to lymphocytic choriomeningitis virus involves the L antigen: Uncovering new tricks for an old virus J. Virol. 81, 4928-4940
    • (2007) J. Virol. , vol.81 , pp. 4928-4940
    • Kotturi, M.F.1    Peters, B.2    Buendia-Laysa, F.3    Sidney, J.4    Oseroff, C.5    Botten, J.6    Grey, H.7    Buchmeier, M.J.8    Sette, A.9
  • 41
    • 80054111473 scopus 로고    scopus 로고
    • Group 1B phospholipase A(2) deficiency protects against diet-induced hyperlipidemia in mice
    • Hollie, N. I. and Hui, D. Y. (2011) Group 1B phospholipase A(2) deficiency protects against diet-induced hyperlipidemia in mice J. Lipid. Res. 52, 2005-2011
    • (2011) J. Lipid. Res. , vol.52 , pp. 2005-2011
    • Hollie, N.I.1    Hui, D.Y.2
  • 42
    • 0015861774 scopus 로고
    • Relationship between the inhibition constant (K1) and the concentration of inhibitor which causes 50% inhibition (I50) of an enzymatic reaction
    • Cheng, Y. and Prusoff, W. H. (1973) Relationship between the inhibition constant (K1) and the concentration of inhibitor which causes 50% inhibition (I50) of an enzymatic reaction Biochem. Pharmacol. 22, 3099-3108
    • (1973) Biochem. Pharmacol. , vol.22 , pp. 3099-3108
    • Cheng, Y.1    Prusoff, W.H.2
  • 43
    • 0031576987 scopus 로고    scopus 로고
    • Two complementary methods for predicting peptides binding major histocompatibility complex molecules
    • Gulukota, K., Sidney, J., Sette, A., and DeLisi, C. (1997) Two complementary methods for predicting peptides binding major histocompatibility complex molecules J. Mol. Biol. 267, 1258-1267
    • (1997) J. Mol. Biol. , vol.267 , pp. 1258-1267
    • Gulukota, K.1    Sidney, J.2    Sette, A.3    Delisi, C.4


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