-
1
-
-
84878651410
-
Potential of industrial biotechnology with cyanobacteria and eukaryotic microalgae
-
Wijffels RH, Kruse O, Hellingwerf KJ. Potential of industrial biotechnology with cyanobacteria and eukaryotic microalgae. Curr Opin Biotechnol. 2013;24(3):405-13.
-
(2013)
Curr Opin Biotechnol
, vol.24
, Issue.3
, pp. 405-413
-
-
Wijffels, R.H.1
Kruse, O.2
Hellingwerf, K.J.3
-
2
-
-
84875005543
-
Potential for green microalgae to produce hydrogen, pharmaceuticals and other high value products in a combined process
-
Skjånes K, Rebours C, Lindblad P. Potential for green microalgae to produce hydrogen, pharmaceuticals and other high value products in a combined process. Crit Rev Biotechnol. 2013;33(2):172-215.
-
(2013)
Crit Rev Biotechnol
, vol.33
, Issue.2
, pp. 172-215
-
-
Skjånes, K.1
Rebours, C.2
Lindblad, P.3
-
3
-
-
84939959777
-
Improving the sunlight to biomass conversion efficiency in microalgal biofactories
-
Wobbe L, Remacle C. Improving the sunlight to biomass conversion efficiency in microalgal biofactories. J Biotechnol. 2014. doi:10.1016/j.jbiotec.2014.08.021.
-
(2014)
J Biotechnol
-
-
Wobbe, L.1
Remacle, C.2
-
4
-
-
77957332953
-
Microalgae as substrates for fermentative biogas production in a combined biorefinery concept
-
Mussgnug JH, Klassen V, Schlüter A, Kruse O. Microalgae as substrates for fermentative biogas production in a combined biorefinery concept. J Biotechnol. 2010;150(1):51-6.
-
(2010)
J Biotechnol
, vol.150
, Issue.1
, pp. 51-56
-
-
Mussgnug, J.H.1
Klassen, V.2
Schlüter, A.3
Kruse, O.4
-
5
-
-
35348896591
-
The chlamydomonas genome reveals the evolution of Key animal and plant functions
-
Merchant SS, Prochnik SE, Vallon O, Harris EH, Karpowicz SJ, Witman GB, et al. The chlamydomonas genome reveals the evolution of Key animal and plant functions. Science. 2007;318(5848):245-50.
-
(2007)
Science
, vol.318
, Issue.5848
, pp. 245-250
-
-
Merchant, S.S.1
Prochnik, S.E.2
Vallon, O.3
Harris, E.H.4
Karpowicz, S.J.5
Witman, G.B.6
-
6
-
-
84908165002
-
The Chlamydomonas genome project: a decade on
-
Blaby IK, Blaby-Haas CE, Tourasse N, Hom EFY, Lopez D, Aksoy M, et al. The Chlamydomonas genome project: a decade on. Trends Plant Sci. 2014;19(10):672-80.
-
(2014)
Trends Plant Sci
, vol.19
, Issue.10
, pp. 672-680
-
-
Blaby, I.K.1
Blaby-Haas, C.E.2
Tourasse, N.3
Hom, E.F.Y.4
Lopez, D.5
Aksoy, M.6
Grossman, A.7
Umen, J.8
Dutcher, S.9
Porter, M.10
-
7
-
-
84865426920
-
Genetically engineered algae for biofuels: a Key role for ecologists
-
Snow AA, Smith VH. Genetically engineered algae for biofuels: a Key role for ecologists. Bioscience. 2012;62(8):765-8.
-
(2012)
Bioscience
, vol.62
, Issue.8
, pp. 765-768
-
-
Snow, A.A.1
Smith, V.H.2
-
8
-
-
84857439896
-
Overcoming biological constraints to enable the exploitation of microalgae for biofuels
-
Day JG, Slocombe SP, Stanley MS. Overcoming biological constraints to enable the exploitation of microalgae for biofuels. Bioresour Technol. 2012;109:245-51.
-
(2012)
Bioresour Technol
, vol.109
, pp. 245-251
-
-
Day, J.G.1
Slocombe, S.P.2
Stanley, M.S.3
-
9
-
-
0037596752
-
tla1, a DNA insertional transformant of the green alga Chlamydomonas reinhardtii with a truncated light-harvesting chlorophyll antenna size
-
Polle JW, Kanakagiri S-D, Melis A. tla1, a DNA insertional transformant of the green alga Chlamydomonas reinhardtii with a truncated light-harvesting chlorophyll antenna size. Planta. 2003;217(1):49-59.
-
(2003)
Planta
, vol.217
, Issue.1
, pp. 49-59
-
-
Polle, J.W.1
Kanakagiri, S.-D.2
Melis, A.3
-
10
-
-
84869238309
-
Modulation of the light-harvesting chlorophyll antenna size in Chlamydomonas reinhardtii by TLA1 gene over-expression and RNA interference
-
Mitra M, Kirst H, Dewez D, Melis A. Modulation of the light-harvesting chlorophyll antenna size in Chlamydomonas reinhardtii by TLA1 gene over-expression and RNA interference. Philos Trans R Soc B. 2012;367(1608):3430-43.
-
(2012)
Philos Trans R Soc B
, vol.367
, Issue.1608
, pp. 3430-3443
-
-
Mitra, M.1
Kirst, H.2
Dewez, D.3
Melis, A.4
-
11
-
-
84870827287
-
Truncated photosystem chlorophyll antenna size in the green microalga Chlamydomonas reinhardtii upon deletion of the TLA3-CpSRP43 gene
-
Kirst H, Garcia-Cerdan JG, Zurbriggen A, Ruehle T, Melis A. Truncated photosystem chlorophyll antenna size in the green microalga Chlamydomonas reinhardtii upon deletion of the TLA3-CpSRP43 gene. Plant Physiol. 2012;160(4):2251-60.
-
(2012)
Plant Physiol
, vol.160
, Issue.4
, pp. 2251-2260
-
-
Kirst, H.1
Garcia-Cerdan, J.G.2
Zurbriggen, A.3
Ruehle, T.4
Melis, A.5
-
12
-
-
80054907931
-
Mutagenesis and phenotypic selection as a strategy toward domestication of Chlamydomonas reinhardtii strains for improved performance in photobioreactors
-
Bonente G, Formighieri C, Mantelli M, Catalanotti C, Giuliano G, Morosinotto T, et al. Mutagenesis and phenotypic selection as a strategy toward domestication of Chlamydomonas reinhardtii strains for improved performance in photobioreactors. Photosynth Res. 2011;108(2-3):107-20.
-
(2011)
Photosynth Res
, vol.108
, Issue.2-3
, pp. 107-120
-
-
Bonente, G.1
Formighieri, C.2
Mantelli, M.3
Catalanotti, C.4
Giuliano, G.5
Morosinotto, T.6
-
13
-
-
35148820055
-
Engineering photosynthetic light capture: impacts on improved solar energy to biomass conversion
-
Mussgnug JH, Thomas-Hall S, Rupprecht J, Foo A, Klassen V, McDowall A, et al. Engineering photosynthetic light capture: impacts on improved solar energy to biomass conversion. Plant Biotechnol J. 2007;5(6):802-14.
-
(2007)
Plant Biotechnol J
, vol.5
, Issue.6
, pp. 802-814
-
-
Mussgnug, J.H.1
Thomas-Hall, S.2
Rupprecht, J.3
Foo, A.4
Klassen, V.5
McDowall, A.6
-
15
-
-
67349200011
-
Improvement of light to biomass conversion by de-regulation of light-harvesting protein translation in Chlamydomonas reinhardtii
-
Beckmann J, Lehr F, Finazzi G, Hankamer B, Posten C, Wobbe L, et al. Improvement of light to biomass conversion by de-regulation of light-harvesting protein translation in Chlamydomonas reinhardtii. J Biotechnol. 2009;142(1):70-7.
-
(2009)
J Biotechnol
, vol.142
, Issue.1
, pp. 70-77
-
-
Beckmann, J.1
Lehr, F.2
Finazzi, G.3
Hankamer, B.4
Posten, C.5
Wobbe, L.6
-
16
-
-
84867710518
-
Optimization of photosynthetic light energy utilization by microalgae
-
Perrine Z, Negi S, Sayre RT. Optimization of photosynthetic light energy utilization by microalgae. Algal Res. 2012;1(2):134-42.
-
(2012)
Algal Res
, vol.1
, Issue.2
, pp. 134-142
-
-
Perrine, Z.1
Negi, S.2
Sayre, R.T.3
-
17
-
-
79952574029
-
Light requirements in microalgal photobioreactors: an overview of biophotonic aspects
-
Carvalho AP, Silva SO, Baptista JM, Malcata FX. Light requirements in microalgal photobioreactors: an overview of biophotonic aspects. Appl Microbiol Biotechnol. 2011;89(5):1275-88.
-
(2011)
Appl Microbiol Biotechnol
, vol.89
, Issue.5
, pp. 1275-1288
-
-
Carvalho, A.P.1
Silva, S.O.2
Baptista, J.M.3
Malcata, F.X.4
-
18
-
-
77956898672
-
Photoprotection and high light responses
-
The Chlamydomonas sourcebook: organellar and metabolic processes. Edited by Stern D,: Academic Press
-
Niyogi KK. Photoprotection and high light responses. In: The Chlamydomonas sourcebook: organellar and metabolic processes. Edited by Stern D, vol. 2: Academic Press; 2009: 847-70.
-
(2009)
, vol.2
, pp. 847-870
-
-
Niyogi, K.K.1
-
19
-
-
84904461977
-
Regulation of photosynthetic electron transport and photoinhibition
-
Roach T, Krieger-Liszkay A. Regulation of photosynthetic electron transport and photoinhibition. Curr Protein Pept Sci. 2014;15(4):351-62.
-
(2014)
Curr Protein Pept Sci
, vol.15
, Issue.4
, pp. 351-362
-
-
Roach, T.1
Krieger-Liszkay, A.2
-
20
-
-
0033506468
-
Photoprotection revisited: genetic and molecular approaches
-
Niyogi KK. Photoprotection revisited: genetic and molecular approaches. Annu Rev Plant Physiol Plant Mol Biol. 1999;50:333-59.
-
(1999)
Annu Rev Plant Physiol Plant Mol Biol
, vol.50
, pp. 333-359
-
-
Niyogi, K.K.1
-
21
-
-
0026547142
-
Too much of a good thing: light can be bad for photosynthesis
-
Barber J, Andersson B. Too much of a good thing: light can be bad for photosynthesis. Trends Biochem Sci. 1992;17(2):61-6.
-
(1992)
Trends Biochem Sci
, vol.17
, Issue.2
, pp. 61-66
-
-
Barber, J.1
Andersson, B.2
-
24
-
-
84883208717
-
Perspectives for identification of mutations in the zebrafish: making use of next-generation sequencing technologies for forward genetic approaches
-
Henke K, Bowen ME, Harris MP. Perspectives for identification of mutations in the zebrafish: making use of next-generation sequencing technologies for forward genetic approaches. Methods. 2013;62:185-96.
-
(2013)
Methods
, vol.62
, pp. 185-196
-
-
Henke, K.1
Bowen, M.E.2
Harris, M.P.3
-
25
-
-
84874262345
-
Genomsequenzierung zur Identifikation von Mutationen
-
Nowrousian M. Genomsequenzierung zur Identifikation von Mutationen. BIOspektrum. 2013;19(1):25-7.
-
(2013)
BIOspektrum
, vol.19
, Issue.1
, pp. 25-27
-
-
Nowrousian, M.1
-
26
-
-
79955726394
-
Fast-forward genetics enabled by new sequencing technologies
-
Schneeberger K, Weigel D. Fast-forward genetics enabled by new sequencing technologies. Trends Plant Sci. 2011;16(5):282-8.
-
(2011)
Trends Plant Sci
, vol.16
, Issue.5
, pp. 282-288
-
-
Schneeberger, K.1
Weigel, D.2
-
27
-
-
84884285255
-
User guide for mapping-by-sequencing in Arabidopsis
-
James GV, Patel V, Nordstrom KJ, Klasen JR, Salome PA, Weigel D, et al. User guide for mapping-by-sequencing in Arabidopsis. Genome Biol. 2013;14(6):R61.
-
(2013)
Genome Biol
, vol.14
, Issue.6
, pp. R61
-
-
James, G.V.1
Patel, V.2
Nordstrom, K.J.3
Klasen, J.R.4
Salome, P.A.5
Weigel, D.6
-
28
-
-
84922264677
-
Using next-generation sequencing to isolate mutant genes from forward genetic screens
-
Advance online publication.
-
Schneeberger K. Using next-generation sequencing to isolate mutant genes from forward genetic screens. Nat Rev Genet. 2014. Advance online publication.
-
(2014)
Nat Rev Genet
-
-
Schneeberger, K.1
-
29
-
-
84904741381
-
Deep sequencing strategies for mapping and identifying mutations from genetic screens
-
Zuryn S, Jarriault S. Deep sequencing strategies for mapping and identifying mutations from genetic screens. Worm. 2013;2(3):e25081.
-
(2013)
Worm
, vol.2
, Issue.3
, pp. e25081
-
-
Zuryn, S.1
Jarriault, S.2
-
30
-
-
68349086946
-
SHOREmap: simultaneous mapping and mutation identification by deep sequencing
-
Schneeberger K, Ossowski S, Lanz C, Juul T, Petersen AH, Nielsen KL, et al. SHOREmap: simultaneous mapping and mutation identification by deep sequencing. Nat Methods. 2009;6(8):550-1.
-
(2009)
Nat Methods
, vol.6
, Issue.8
, pp. 550-551
-
-
Schneeberger, K.1
Ossowski, S.2
Lanz, C.3
Juul, T.4
Petersen, A.H.5
Nielsen, K.L.6
-
31
-
-
78149477199
-
C. Elegans mutant identification with a One-step whole-genome-sequencing and SNP mapping strategy
-
Doitsidou M, Poole RJ, Sarin S, Bigelow H, Hobert O. C. Elegans mutant identification with a One-step whole-genome-sequencing and SNP mapping strategy. PLoS One. 2010;5(11):e15435.
-
(2010)
PLoS One
, vol.5
, Issue.11
, pp. e15435
-
-
Doitsidou, M.1
Poole, R.J.2
Sarin, S.3
Bigelow, H.4
Hobert, O.5
-
32
-
-
79957932379
-
Bulk segregant analysis followed by high-throughput sequencing reveals the Neurospora cell cycle gene, ndc-1, to be allelic with the gene for ornithine decarboxylase, spe-1
-
Pomraning KR, Smith KM, Freitag M. Bulk segregant analysis followed by high-throughput sequencing reveals the Neurospora cell cycle gene, ndc-1, to be allelic with the gene for ornithine decarboxylase, spe-1. Eukaryot Cell. 2011;10(6):724-33.
-
(2011)
Eukaryot Cell
, vol.10
, Issue.6
, pp. 724-733
-
-
Pomraning, K.R.1
Smith, K.M.2
Freitag, M.3
-
33
-
-
84864581937
-
Mutation mapping and identification by whole-genome sequencing
-
Leshchiner I, Alexa K, Kelsey P, Adzhubei I, Austin-Tse CA, Cooney JD, et al. Mutation mapping and identification by whole-genome sequencing. Genome Res. 2012;22(8):1541-8.
-
(2012)
Genome Res
, vol.22
, Issue.8
, pp. 1541-1548
-
-
Leshchiner, I.1
Alexa, K.2
Kelsey, P.3
Adzhubei, I.4
Austin-Tse, C.A.5
Cooney, J.D.6
-
34
-
-
67849099231
-
Identification of EMS-induced mutations in Drosophila melanogaster by whole-genome sequencing
-
Blumenstiel JP, Noll AC, Griffiths JA, Perera AG, Walton KN, Gilliland WD, et al. Identification of EMS-induced mutations in Drosophila melanogaster by whole-genome sequencing. Genetics. 2009;182(1):25-32.
-
(2009)
Genetics
, vol.182
, Issue.1
, pp. 25-32
-
-
Blumenstiel, J.P.1
Noll, A.C.2
Griffiths, J.A.3
Perera, A.G.4
Walton, K.N.5
Gilliland, W.D.6
-
35
-
-
78751654713
-
A strategy for direct mapping and identification of mutations by whole-genome sequencing
-
Zuryn S, Le Gras S, Jamet K, Jarriault S. A strategy for direct mapping and identification of mutations by whole-genome sequencing. Genetics. 2010;186(1):427-30.
-
(2010)
Genetics
, vol.186
, Issue.1
, pp. 427-430
-
-
Zuryn, S.1
Gras, S.2
Jamet, K.3
Jarriault, S.4
-
36
-
-
84858200179
-
Efficient mapping and cloning of mutations in zebrafish by low-coverage whole-genome sequencing
-
Bowen ME, Henke K, Siegfried KR, Warman ML, Harris MP. Efficient mapping and cloning of mutations in zebrafish by low-coverage whole-genome sequencing. Genetics. 2012;190(3):1017-24.
-
(2012)
Genetics
, vol.190
, Issue.3
, pp. 1017-1024
-
-
Bowen, M.E.1
Henke, K.2
Siegfried, K.R.3
Warman, M.L.4
Harris, M.P.5
-
37
-
-
84875286904
-
RNA-seq-based mapping and candidate identification of mutations from forward genetic screens
-
Miller AC, Obholzer ND, Shah AN, Megason SG, Moens CB. RNA-seq-based mapping and candidate identification of mutations from forward genetic screens. Genome Res. 2013;23(4):679-86.
-
(2013)
Genome Res
, vol.23
, Issue.4
, pp. 679-686
-
-
Miller, A.C.1
Obholzer, N.D.2
Shah, A.N.3
Megason, S.G.4
Moens, C.B.5
-
38
-
-
84900850639
-
Facile mutant identification via a single parental backcross method and application of whole genome sequencing based mapping pipelines
-
Allen RS, Nakasugi K, Doran RL, Millar AA, Waterhouse PM. Facile mutant identification via a single parental backcross method and application of whole genome sequencing based mapping pipelines. Front Plant Sci. 2013;4:362.
-
(2013)
Front Plant Sci
, vol.4
, pp. 362
-
-
Allen, R.S.1
Nakasugi, K.2
Doran, R.L.3
Millar, A.A.4
Waterhouse, P.M.5
-
39
-
-
84876285983
-
Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers
-
Nordström KJV, Albani MC, James GV, Gutjahr C, Hartwig B, Turck F, et al. Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers. Nat Biotechnol. 2013;31(4):325-30.
-
(2013)
Nat Biotechnol
, vol.31
, Issue.4
, pp. 325-330
-
-
Nordström, K.J.V.1
Albani, M.C.2
James, G.V.3
Gutjahr, C.4
Hartwig, B.5
Turck, F.6
-
40
-
-
66449106639
-
Mapping epigenetic mutations in fission yeast using whole-genome next-generation sequencing
-
Irvine DV, Goto DB, Vaughn MW, Nakaseko Y, McCombie WR, Yanagida M, et al. Mapping epigenetic mutations in fission yeast using whole-genome next-generation sequencing. Genome Res. 2009;19(6):1077-83.
-
(2009)
Genome Res
, vol.19
, Issue.6
, pp. 1077-1083
-
-
Irvine, D.V.1
Goto, D.B.2
Vaughn, M.W.3
Nakaseko, Y.4
McCombie, W.R.5
Yanagida, M.6
-
41
-
-
0033081962
-
Mutants of Chlamydomonas reinhardtii resistant to very high light
-
Förster B, Osmond CB, Boynton JE, Gillham NW. Mutants of Chlamydomonas reinhardtii resistant to very high light. J Photochem Photobiol B Biol. 1999;48(2-3):127-35.
-
(1999)
J Photochem Photobiol B Biol
, vol.48
, Issue.2-3
, pp. 127-135
-
-
Förster, B.1
Osmond, C.B.2
Boynton, J.E.3
Gillham, N.W.4
-
42
-
-
84870709677
-
Estimate of the spontaneous mutation rate in Chlamydomonas reinhardtii
-
Ness RW, Morgan AD, Colegrave N, Keightley PD. Estimate of the spontaneous mutation rate in Chlamydomonas reinhardtii. Genetics. 2012;192(4):1447-54.
-
(2012)
Genetics
, vol.192
, Issue.4
, pp. 1447-1454
-
-
Ness, R.W.1
Morgan, A.D.2
Colegrave, N.3
Keightley, P.D.4
-
43
-
-
77956910544
-
WD40 proteins propel cellular networks
-
Stirnimann CU, Petsalaki E, Russell RB, Müller CW. WD40 proteins propel cellular networks. Trends Biochem Sci. 2010;35(10):565-74.
-
(2010)
Trends Biochem Sci
, vol.35
, Issue.10
, pp. 565-574
-
-
Stirnimann, C.U.1
Petsalaki, E.2
Russell, R.B.3
Müller, C.W.4
-
44
-
-
0026671355
-
Structural principles for the propeller assembly of ß-sheets: the preference for seven-fold symmetry
-
Murzin AG. Structural principles for the propeller assembly of ß-sheets: the preference for seven-fold symmetry. Proteins: Struct Funct Bioinf. 1992;14(2):191-201.
-
(1992)
Proteins: Struct Funct Bioinf
, vol.14
, Issue.2
, pp. 191-201
-
-
Murzin, A.G.1
-
45
-
-
84874454315
-
Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival
-
Duanmu D, Casero D, Dent RM, Gallaher S, Yang W, Rockwell NC, et al. Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival. Proc Natl Acad Sci U S A. 2013;110:3621-6.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 3621-3626
-
-
Duanmu, D.1
Casero, D.2
Dent, R.M.3
Gallaher, S.4
Yang, W.5
Rockwell, N.C.6
-
46
-
-
0026454289
-
COP1, an Arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a G beta homologous domain
-
Deng XW, Matsui M, Wei N, Wagner D, Chu AM, Feldmann KA, et al. COP1, an Arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a G beta homologous domain. Cell. 1992;71(5):791-801.
-
(1992)
Cell
, vol.71
, Issue.5
, pp. 791-801
-
-
Deng, X.W.1
Matsui, M.2
Wei, N.3
Wagner, D.4
Chu, A.M.5
Feldmann, K.A.6
-
47
-
-
84865838485
-
The photomorphogenic repressors COP1 and DET1: 20 years later
-
Lau OS, Deng XW. The photomorphogenic repressors COP1 and DET1: 20 years later. Trends Plant Sci. 2012;17(10):584-93.
-
(2012)
Trends Plant Sci
, vol.17
, Issue.10
, pp. 584-593
-
-
Lau, O.S.1
Deng, X.W.2
-
48
-
-
38549143785
-
Insertional mutagenesis as a tool to study genes/functions in Chlamydomonas
-
Galván A, González-Ballester D, Fernández E. Insertional mutagenesis as a tool to study genes/functions in Chlamydomonas. Adv Exp Med Biol. 2007;616:77-89.
-
(2007)
Adv Exp Med Biol
, vol.616
, pp. 77-89
-
-
Galván, A.1
González-Ballester, D.2
Fernández, E.3
-
49
-
-
21344463833
-
Insertional mutagenesis in mice: new perspectives and tools
-
Carlson CM, Largaespada DA. Insertional mutagenesis in mice: new perspectives and tools. Nat Rev Genet. 2005;6(7):568-80.
-
(2005)
Nat Rev Genet
, vol.6
, Issue.7
, pp. 568-580
-
-
Carlson, C.M.1
Largaespada, D.A.2
-
50
-
-
53249091939
-
Caenorhabditis elegans mutant allele identification by whole-genome sequencing
-
Sarin S, Prabhu S, O'Meara MM, Pe'er I, Hobert O. Caenorhabditis elegans mutant allele identification by whole-genome sequencing. Nat Methods. 2008;5(10):865-7.
-
(2008)
Nat Methods
, vol.5
, Issue.10
, pp. 865-867
-
-
Sarin, S.1
Prabhu, S.2
O'Meara, M.M.3
Pe'er, I.4
Hobert, O.5
-
51
-
-
84867115083
-
Fast isogenic mapping-by-sequencing of ethyl methanesulfonate-induced mutant bulks
-
Hartwig B, James GV, Konrad K, Schneeberger K, Turck F. Fast isogenic mapping-by-sequencing of ethyl methanesulfonate-induced mutant bulks. Plant Physiol. 2012;160(2):591-600.
-
(2012)
Plant Physiol
, vol.160
, Issue.2
, pp. 591-600
-
-
Hartwig, B.1
James, G.V.2
Konrad, K.3
Schneeberger, K.4
Turck, F.5
-
52
-
-
84864340750
-
Whole-genome sequencing to identify mutants and polymorphisms in Chlamydomonas reinhardtii
-
Dutcher SK, Li L, Lin H, Meyer L, Giddings JTH, Kwan AL, et al. Whole-genome sequencing to identify mutants and polymorphisms in Chlamydomonas reinhardtii. G3 (Bethesda). 2012;2(1):15-22.
-
(2012)
G3 (Bethesda)
, vol.2
, Issue.1
, pp. 15-22
-
-
Dutcher, S.K.1
Li, L.2
Lin, H.3
Meyer, L.4
Giddings, J.T.H.5
Kwan, A.L.6
-
53
-
-
84884693165
-
Whole genome sequencing identifies a deletion in protein phosphatase 2A that affects its stability and localization in Chlamydomonas reinhardtii
-
Lin H, Miller ML, Granas DM, Dutcher SK. Whole genome sequencing identifies a deletion in protein phosphatase 2A that affects its stability and localization in Chlamydomonas reinhardtii. PLoS Genet. 2013;9(9):e1003841.
-
(2013)
PLoS Genet
, vol.9
, Issue.9
, pp. e1003841
-
-
Lin, H.1
Miller, M.L.2
Granas, D.M.3
Dutcher, S.K.4
-
54
-
-
84864374216
-
Genome-wide characterization of genetic variation in the unicellular: green alga Chlamydomonas reinhardtii
-
Jang H, Ehrenreich IM. Genome-wide characterization of genetic variation in the unicellular: green alga Chlamydomonas reinhardtii. PLoS One. 2012;7(7):e41307.
-
(2012)
PLoS One
, vol.7
, Issue.7
, pp. e41307
-
-
Jang, H.1
Ehrenreich, I.M.2
-
55
-
-
84868599895
-
Drift-barrier hypothesis and mutation-rate evolution
-
Sung W, Ackerman MS, Miller SF, Doak TG, Lynch M. Drift-barrier hypothesis and mutation-rate evolution. Proc Natl Acad Sci. 2012;109(45):18488-92.
-
(2012)
Proc Natl Acad Sci
, vol.109
, Issue.45
, pp. 18488-18492
-
-
Sung, W.1
Ackerman, M.S.2
Miller, S.F.3
Doak, T.G.4
Lynch, M.5
-
56
-
-
0036557024
-
UV-induced DNA damage and repair: a review
-
Sinha RP, Häder DP. UV-induced DNA damage and repair: a review. Photochem Photobiol Sci. 2002;1(4):225-36.
-
(2002)
Photochem Photobiol Sci
, vol.1
, Issue.4
, pp. 225-236
-
-
Sinha, R.P.1
Häder, D.P.2
-
57
-
-
84897531334
-
Physicochemical mechanism of light-driven DNA repair by (6-4) photolyases
-
Faraji S, Dreuw A. Physicochemical mechanism of light-driven DNA repair by (6-4) photolyases. Annu Rev Phys Chem. 2014;65:275-92.
-
(2014)
Annu Rev Phys Chem
, vol.65
, pp. 275-292
-
-
Faraji, S.1
Dreuw, A.2
-
58
-
-
70849095710
-
An ancient light-harvesting protein is critical for the regulation of algal photosynthesis
-
Peers G, Truong TB, Ostendorf E, Busch A, Elrad D, Grossman AR, et al. An ancient light-harvesting protein is critical for the regulation of algal photosynthesis. Nature. 2009;462(7272):518-21.
-
(2009)
Nature
, vol.462
, Issue.7272
, pp. 518-521
-
-
Peers, G.1
Truong, T.B.2
Ostendorf, E.3
Busch, A.4
Elrad, D.5
Grossman, A.R.6
-
59
-
-
43749119398
-
Interactions between the photosystem II subunit PsbS and xanthophylls studied in vivo and in vitro
-
Bonente G, Howes BD, Caffarri S, Smulevich G, Bassi R. Interactions between the photosystem II subunit PsbS and xanthophylls studied in vivo and in vitro. J Biol Chem. 2008;283(13):8434-45.
-
(2008)
J Biol Chem
, vol.283
, Issue.13
, pp. 8434-8445
-
-
Bonente, G.1
Howes, B.D.2
Caffarri, S.3
Smulevich, G.4
Bassi, R.5
-
60
-
-
79851485918
-
Analysis of LhcSR3, a protein essential for feedback de-excitation in the green alga Chlamydomonas reinhardtii
-
Bonente G, Ballottari M, Truong TB, Morosinotto T, Ahn TK, Fleming GR, et al. Analysis of LhcSR3, a protein essential for feedback de-excitation in the green alga Chlamydomonas reinhardtii. PLoS Biol. 2011;9(1):e1000577.
-
(2011)
PLoS Biol
, vol.9
, Issue.1
, pp. e1000577
-
-
Bonente, G.1
Ballottari, M.2
Truong, T.B.3
Morosinotto, T.4
Ahn, T.K.5
Fleming, G.R.6
-
61
-
-
84878984467
-
Evolution of flexible non-photochemical quenching mechanisms that regulate light harvesting in oxygenic photosynthesis
-
Niyogi KK, Truong TB. Evolution of flexible non-photochemical quenching mechanisms that regulate light harvesting in oxygenic photosynthesis. Curr Opin Plant Biol. 2013;16(3):307-14.
-
(2013)
Curr Opin Plant Biol
, vol.16
, Issue.3
, pp. 307-314
-
-
Niyogi, K.K.1
Truong, T.B.2
-
62
-
-
27744474619
-
COP1 - from plant photomorphogenesis to mammalian tumorigenesis
-
Yi C, Deng XW. COP1 - from plant photomorphogenesis to mammalian tumorigenesis. Trends Cell Biol. 2005;15(11):618-25.
-
(2005)
Trends Cell Biol
, vol.15
, Issue.11
, pp. 618-625
-
-
Yi, C.1
Deng, X.W.2
-
63
-
-
79960068470
-
Structure and function of WD40 domain proteins
-
Xu C, Min J. Structure and function of WD40 domain proteins. Protein Cell. 2011;2(3):202-14.
-
(2011)
Protein Cell
, vol.2
, Issue.3
, pp. 202-214
-
-
Xu, C.1
Min, J.2
-
64
-
-
58149161238
-
Diversity of WD-repeat proteins
-
In: Clemen C, Eichinger L, Rybakin V, editors. The coronin family of proteins. 48th ed. New York: Springer
-
Smith TF. Diversity of WD-repeat proteins. In: Clemen C, Eichinger L, Rybakin V, editors. The coronin family of proteins. 48th ed. New York: Springer; 2008. p. 20-30.
-
(2008)
, pp. 20-30
-
-
Smith, T.F.1
-
65
-
-
0025977953
-
A novel gysteine-rich sequence motif
-
Freemont PS, Hanson IM, Trowsdale J. A novel gysteine-rich sequence motif. Cell. 1991;64(3):483-4.
-
(1991)
Cell
, vol.64
, Issue.3
, pp. 483-484
-
-
Freemont, P.S.1
Hanson, I.M.2
Trowsdale, J.3
-
66
-
-
0029977716
-
The RING finger domain: a recent example of a sequence-structure family
-
Borden KLB, Freemont PS. The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol. 1996;6(3):395-401.
-
(1996)
Curr Opin Struct Biol
, vol.6
, Issue.3
, pp. 395-401
-
-
Borden, K.L.B.1
Freemont, P.S.2
-
67
-
-
0034602928
-
RING domains: master builders of molecular scaffolds?
-
Borden KLB. RING domains: master builders of molecular scaffolds? J Mol Biol. 2000;295(5):1103-12.
-
(2000)
J Mol Biol
, vol.295
, Issue.5
, pp. 1103-1112
-
-
Borden, K.L.B.1
-
69
-
-
10944267031
-
Light signal transduction in higher plants
-
Chen M, Chory J, Fankhauser C. Light signal transduction in higher plants. Annu Rev Genet. 2004;38:87-117.
-
(2004)
Annu Rev Genet
, vol.38
, pp. 87-117
-
-
Chen, M.1
Chory, J.2
Fankhauser, C.3
-
70
-
-
0035812725
-
Direct interaction of Arabidopsis cryptochromes with COP1 in light control development
-
Wang H, Ma LG, Li JM, Zhao HY, Deng XW. Direct interaction of Arabidopsis cryptochromes with COP1 in light control development. Science. 2001;294(5540):154-8.
-
(2001)
Science
, vol.294
, Issue.5540
, pp. 154-158
-
-
Wang, H.1
Ma, L.G.2
Li, J.M.3
Zhao, H.Y.4
Deng, X.W.5
-
71
-
-
0035863052
-
Identification of a structural motif that confers specific interaction with the WD40 repeat domain of Arabidopsis COP1
-
Holm M, Hardtke CS, Gaudet R, Deng XW. Identification of a structural motif that confers specific interaction with the WD40 repeat domain of Arabidopsis COP1. EMBO J. 2001;20(1-2):118-27.
-
(2001)
EMBO J
, vol.20
, Issue.1-2
, pp. 118-127
-
-
Holm, M.1
Hardtke, C.S.2
Gaudet, R.3
Deng, X.W.4
-
72
-
-
84877688885
-
Light and the E3 ubiquitin ligase COP1/SPA control the protein stability of the MYB transcription factors PAP1 and PAP2 involved in anthocyanin accumulation in Arabidopsis
-
Maier A, Schrader A, Kokkelink L, Falke C, Welter B, Iniesto E, et al. Light and the E3 ubiquitin ligase COP1/SPA control the protein stability of the MYB transcription factors PAP1 and PAP2 involved in anthocyanin accumulation in Arabidopsis. Plant J. 2013;74(4):638-51.
-
(2013)
Plant J
, vol.74
, Issue.4
, pp. 638-651
-
-
Maier, A.1
Schrader, A.2
Kokkelink, L.3
Falke, C.4
Welter, B.5
Iniesto, E.6
-
73
-
-
77953361331
-
Biodiesel from algae: challenges and prospects
-
Scott SA, Davey MP, Dennis JS, Horst I, Howe CJ, Lea-Smith DJ, et al. Biodiesel from algae: challenges and prospects. Curr Opin Biotechnol. 2010;21(3):277-86.
-
(2010)
Curr Opin Biotechnol
, vol.21
, Issue.3
, pp. 277-286
-
-
Scott, S.A.1
Davey, M.P.2
Dennis, J.S.3
Horst, I.4
Howe, C.J.5
Lea-Smith, D.J.6
-
74
-
-
84888007951
-
Modeling the effects of light and temperature on algae growth: state of the art and critical assessment for productivity prediction during outdoor cultivation
-
Béchet Q, Shilton A, Guieysse B. Modeling the effects of light and temperature on algae growth: state of the art and critical assessment for productivity prediction during outdoor cultivation. Biotechnol Adv. 2013;31(8):1648-63.
-
(2013)
Biotechnol Adv
, vol.31
, Issue.8
, pp. 1648-1663
-
-
Béchet, Q.1
Shilton, A.2
Guieysse, B.3
-
75
-
-
79953862774
-
Identification of EMS-induced causal mutations in a non-reference Arabidopsis thaliana accession by whole genome sequencing
-
Uchida N, Sakamoto T, Kurata T, Tasaka M. Identification of EMS-induced causal mutations in a non-reference Arabidopsis thaliana accession by whole genome sequencing. Plant Cell Physiol. 2011;52(4):716-22.
-
(2011)
Plant Cell Physiol
, vol.52
, Issue.4
, pp. 716-722
-
-
Uchida, N.1
Sakamoto, T.2
Kurata, T.3
Tasaka, M.4
-
76
-
-
0001844190
-
Copper enzymes in isolated chloroplasts: polyphenoloxidase in Beta Vulgaris
-
Arnon DI. Copper enzymes in isolated chloroplasts: polyphenoloxidase in Beta Vulgaris. Plant Physiol. 1949;24(1):1-15.
-
(1949)
Plant Physiol
, vol.24
, Issue.1
, pp. 1-15
-
-
Arnon, D.I.1
-
77
-
-
0032068061
-
The regulation of photosynthetic electron transport during nutrient deprivation in Chlamydomonas reinhardtii
-
Wykoff DD, Davies JP, Melis A, Grossman AR. The regulation of photosynthetic electron transport during nutrient deprivation in Chlamydomonas reinhardtii. Plant Physiol. 1998;117(1):129-39.
-
(1998)
Plant Physiol
, vol.117
, Issue.1
, pp. 129-139
-
-
Wykoff, D.D.1
Davies, J.P.2
Melis, A.3
Grossman, A.R.4
-
78
-
-
0034063592
-
Chlorophyll fluorescence-a practical guide
-
Maxwell K, Johnson GN. Chlorophyll fluorescence-a practical guide. J Exp Bot. 2000;51(345):659-68.
-
(2000)
J Exp Bot
, vol.51
, Issue.345
, pp. 659-668
-
-
Maxwell, K.1
Johnson, G.N.2
-
79
-
-
66749108480
-
A proteomic survey of Chlamydomonas reinhardtii mitochondria sheds New light on the metabolic plasticity of the organelle and on the nature of the α-proteobacterial mitochondrial ancestor
-
Atteia A, Adrait A, Brugière S, Tardif M, van Lis R, Deusch O, et al. A proteomic survey of Chlamydomonas reinhardtii mitochondria sheds New light on the metabolic plasticity of the organelle and on the nature of the α-proteobacterial mitochondrial ancestor. Mol Biol Evol. 2009;26(7):1533-48.
-
(2009)
Mol Biol Evol
, vol.26
, Issue.7
, pp. 1533-1548
-
-
Atteia, A.1
Adrait, A.2
Brugière, S.3
Tardif, M.4
Lis, R.5
Deusch, O.6
-
80
-
-
79953310710
-
An optimized method for the isolation of nuclei from chlamydomonas reinhardtii (chlorophyceae)
-
Winck FV, Kwasniewski M, Wienkoop S, Mueller-Roeber B. An optimized method for the isolation of nuclei from chlamydomonas reinhardtii (chlorophyceae). J Phycol. 2011;47(2):333-40.
-
(2011)
J Phycol
, vol.47
, Issue.2
, pp. 333-340
-
-
Winck, F.V.1
Kwasniewski, M.2
Wienkoop, S.3
Mueller-Roeber, B.4
-
81
-
-
84924879483
-
-
The Sequence Read Archive (SRA) [ http://www.ncbi.nlm.nih.gov/sra ].
-
-
-
-
82
-
-
84864483625
-
RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
-
Lohse M, Bolger AM, Nagel A, Fernie AR, Lunn JE, Stitt M, et al. RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res. 2012;40(W1):W622-7.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.1 W
, pp. W622-W627
-
-
Lohse, M.1
Bolger, A.M.2
Nagel, A.3
Fernie, A.R.4
Lunn, J.E.5
Stitt, M.6
-
83
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li H, Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics. 2009;25(14):1754-60.
-
(2009)
Bioinformatics
, vol.25
, Issue.14
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
84
-
-
68549104404
-
The sequence Alignment/Map format and SAMtools
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, et al. The sequence Alignment/Map format and SAMtools. Bioinformatics. 2009;25(16):2078-9.
-
(2009)
Bioinformatics
, vol.25
, Issue.16
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
-
85
-
-
79955483667
-
A framework for variation discovery and genotyping using next-generation DNA sequencing data
-
DePristo MA, Banks E, Poplin R, Garimella KV, Maguire JR, Hartl C, et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat Genet. 2011;43(5):491-8.
-
(2011)
Nat Genet
, vol.43
, Issue.5
, pp. 491-498
-
-
DePristo, M.A.1
Banks, E.2
Poplin, R.3
Garimella, K.V.4
Maguire, J.R.5
Hartl, C.6
-
86
-
-
0004053148
-
The AWK programming language: Addison-Wesley Longman Publishing Co., Inc.
-
Aho AV, Kernighan BW, Weinberger PJ. The AWK programming language: Addison-Wesley Longman Publishing Co., Inc. 1987.
-
(1987)
-
-
Aho, A.V.1
Kernighan, B.W.2
Weinberger, P.J.3
-
87
-
-
84924879482
-
-
ReadXplorer - visualization and analysis of mapped sequences
-
ReadXplorer - visualization and analysis of mapped sequences [ www.readxplorer.org ]
-
-
-
-
88
-
-
84875634162
-
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
-
Thorvaldsdóttir H, Robinson JT, Mesirov JP. Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration. Brief Bioinform. 2013;14(2):178-92.
-
(2013)
Brief Bioinform
, vol.14
, Issue.2
, pp. 178-192
-
-
Thorvaldsdóttir, H.1
Robinson, J.T.2
Mesirov, J.P.3
-
89
-
-
84924879481
-
-
RepeatMasker Open-3.0. 1996-2010
-
RepeatMasker Open-3.0. 1996-2010 [ http://www.repeatmasker.org ]
-
-
-
-
90
-
-
77954065271
-
I-TASSER: a unified platform for automated protein structure and function prediction
-
Roy A, Kucukural A, Zhang Y. I-TASSER: a unified platform for automated protein structure and function prediction. Nat Protocols. 2010;5(4):725-38.
-
(2010)
Nat Protocols
, vol.5
, Issue.4
, pp. 725-738
-
-
Roy, A.1
Kucukural, A.2
Zhang, Y.3
-
91
-
-
84864460609
-
COFACTOR: an accurate comparative algorithm for structure-based protein function annotation
-
Roy A, Yang J, Zhang Y. COFACTOR: an accurate comparative algorithm for structure-based protein function annotation. Nucleic Acids Res. 2012;40(Web Server issue):W471-7.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.WEB SERVER ISSUE
, pp. W471-W477
-
-
Roy, A.1
Yang, J.2
Zhang, Y.3
-
92
-
-
39449115394
-
I-TASSER server for protein 3D structure prediction
-
Zhang Y. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics. 2008;9:40.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 40
-
-
Zhang, Y.1
-
93
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling
-
Guex N, Peitsch MC. SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis. 1997;18(15):2714-23.
-
(1997)
Electrophoresis
, vol.18
, Issue.15
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
94
-
-
84924879480
-
-
Phytozome [ http://www.phytozome.net/ ]
-
-
-
|