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Volumn 16, Issue 1, 2015, Pages

Identification of radiation-induced aberrant hypomethylation in colon cancer

Author keywords

5 aza 2' deoxycytidine; Colon cancer; DNA hypomethylation; Gene ontology; Ionizing radiation; Methylation profiling

Indexed keywords

DNA METHYLTRANSFERASE 1; DNA (CYTOSINE 5) METHYLTRANSFERASE;

EID: 84924311126     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-015-1229-6     Document Type: Article
Times cited : (24)

References (38)
  • 1
    • 40849139208 scopus 로고    scopus 로고
    • Epigenetics in cancer
    • Esteller M. Epigenetics in cancer. N Engl J Med. 2008;358(11):1148-59.
    • (2008) N Engl J Med , vol.358 , Issue.11 , pp. 1148-1159
    • Esteller, M.1
  • 2
    • 77954661906 scopus 로고    scopus 로고
    • DNA hypomethylation in cancer cells
    • Ehrlich M. DNA hypomethylation in cancer cells. Epigenomics. 2009;1(2):239-59.
    • (2009) Epigenomics , vol.1 , Issue.2 , pp. 239-259
    • Ehrlich, M.1
  • 3
    • 33847065486 scopus 로고    scopus 로고
    • The epigenomics of cancer
    • Jones PA, Baylin SB. The epigenomics of cancer. Cell. 2007;128(4):683-92.
    • (2007) Cell , vol.128 , Issue.4 , pp. 683-692
    • Jones, P.A.1    Baylin, S.B.2
  • 4
    • 84878766360 scopus 로고    scopus 로고
    • DNA methylation of mobile genetic elements in human cancers
    • Han K, Lee J, Km H-S, Yang K, Yi JM. DNA methylation of mobile genetic elements in human cancers. Gene Genom. 2013;35(3):265-71.
    • (2013) Gene Genom , vol.35 , Issue.3 , pp. 265-271
    • Han, K.1    Lee, J.2    Km, H.-S.3    Yang, K.4    Yi, J.M.5
  • 5
    • 34447264036 scopus 로고    scopus 로고
    • Evidence based radiation oncology: breast cancer
    • Poortmans P. Evidence based radiation oncology: breast cancer. Radiother Oncol. 2007;84(1):84-101.
    • (2007) Radiother Oncol , vol.84 , Issue.1 , pp. 84-101
    • Poortmans, P.1
  • 6
    • 0027976408 scopus 로고
    • Initial events in the cellular effects of ionizing radiations: clustered damage in DNA
    • Goodhead DT. Initial events in the cellular effects of ionizing radiations: clustered damage in DNA. Int J Radiat Biol. 1994;65(1):7-17.
    • (1994) Int J Radiat Biol , vol.65 , Issue.1 , pp. 7-17
    • Goodhead, D.T.1
  • 7
    • 84924289413 scopus 로고    scopus 로고
    • Combination effect of epigenetic regulation and ionizing radiation in colorectal cancer cells
    • Kim J-G, Bae J-H, Kim J-A, Heo K, Yang K-M, Yi JM. Combination effect of epigenetic regulation and ionizing radiation in colorectal cancer cells. PLoS One. 2014;9(8):e105405.
    • (2014) PLoS One , vol.9 , Issue.8
    • Kim, J.-G.1    Bae, J.-H.2    Kim, J.-A.3    Heo, K.4    Yang, K.-M.5    Yi, J.M.6
  • 8
    • 7444226882 scopus 로고    scopus 로고
    • Sex- and tissue-specific expression of maintenance and de novo DNA methyltransferases upon low dose X-irradiation in mice
    • Raiche J, Rodriguez-Juarez R, Pogribny I, Kovalchuk O. Sex- and tissue-specific expression of maintenance and de novo DNA methyltransferases upon low dose X-irradiation in mice. Biochem Biophys Res Commun. 2004;325(1):39-47.
    • (2004) Biochem Biophys Res Commun , vol.325 , Issue.1 , pp. 39-47
    • Raiche, J.1    Rodriguez-Juarez, R.2    Pogribny, I.3    Kovalchuk, O.4
  • 9
    • 0037028291 scopus 로고    scopus 로고
    • Identification of radiation-specific responses from gene expression profile
    • Park WY, Hwang CI, Im CN, Kang MJ, Woo JH, Kim JH, et al. Identification of radiation-specific responses from gene expression profile. Oncogene. 2002;21(55):8521-8.
    • (2002) Oncogene , vol.21 , Issue.55 , pp. 8521-8528
    • Park, W.Y.1    Hwang, C.I.2    Im, C.N.3    Kang, M.J.4    Woo, J.H.5    Kim, J.H.6
  • 10
    • 21444458033 scopus 로고    scopus 로고
    • Stress-specific signatures: expression profiling of p53 wild-type and -null human cells
    • Amundson SA, Do KT, Vinikoor L, Koch-Paiz CA, Bittner ML, Trent JM, et al. Stress-specific signatures: expression profiling of p53 wild-type and -null human cells. Oncogene. 2005;24(28):4572-9.
    • (2005) Oncogene , vol.24 , Issue.28 , pp. 4572-4579
    • Amundson, S.A.1    Do, K.T.2    Vinikoor, L.3    Koch-Paiz, C.A.4    Bittner, M.L.5    Trent, J.M.6
  • 11
    • 84862828219 scopus 로고    scopus 로고
    • DNMT (DNA methyltransferase) inhibitors radiosensitize human cancer cells by suppressing DNA repair activity
    • Kim HJ, Kim JH, Chie EK, Young PD, Kim IA, Kim IH. DNMT (DNA methyltransferase) inhibitors radiosensitize human cancer cells by suppressing DNA repair activity. Radiat Oncol. 2012;7:39.
    • (2012) Radiat Oncol , vol.7 , pp. 39
    • Kim, H.J.1    Kim, J.H.2    Chie, E.K.3    Young, P.D.4    Kim, I.A.5    Kim, I.H.6
  • 13
    • 80053304450 scopus 로고    scopus 로고
    • High density DNA methylation array with single CpG site resolution
    • Bibikova M, Barnes B, Tsan C, Ho V, Klotzle B, Le JM, et al. High density DNA methylation array with single CpG site resolution. Genomics. 2011;98(4):288-95.
    • (2011) Genomics , vol.98 , Issue.4 , pp. 288-295
    • Bibikova, M.1    Barnes, B.2    Tsan, C.3    Ho, V.4    Klotzle, B.5    Le, J.M.6
  • 14
    • 1842509726 scopus 로고    scopus 로고
    • Methylation changes in muscle and liver tissues of male and female mice exposed to acute and chronic low-dose X-ray-irradiation
    • Kovalchuk O, Burke P, Besplug J, Slovack M, Filkowski J, Pogribny I. Methylation changes in muscle and liver tissues of male and female mice exposed to acute and chronic low-dose X-ray-irradiation. Mutat Res. 2004;548(1-2):75-84.
    • (2004) Mutat Res , vol.548 , Issue.1-2 , pp. 75-84
    • Kovalchuk, O.1    Burke, P.2    Besplug, J.3    Slovack, M.4    Filkowski, J.5    Pogribny, I.6
  • 15
    • 3142703591 scopus 로고    scopus 로고
    • Dose-dependence, sex- and tissue-specificity, and persistence of radiation-induced genomic DNA methylation changes
    • Pogribny I, Raiche J, Slovack M, Kovalchuk O. Dose-dependence, sex- and tissue-specificity, and persistence of radiation-induced genomic DNA methylation changes. Biochem Biophys Res Commun. 2004;320(4):1253-61.
    • (2004) Biochem Biophys Res Commun , vol.320 , Issue.4 , pp. 1253-1261
    • Pogribny, I.1    Raiche, J.2    Slovack, M.3    Kovalchuk, O.4
  • 16
    • 0023227949 scopus 로고
    • Differential nuclear protein binding to 5-azacytosine-containing DNA as a potential mechanism for 5-aza-2'-deoxycytidine resistance
    • Michalowsky LA, Jones PA. Differential nuclear protein binding to 5-azacytosine-containing DNA as a potential mechanism for 5-aza-2'-deoxycytidine resistance. Mol Cell Biol. 1987;7(9):3076-83.
    • (1987) Mol Cell Biol , vol.7 , Issue.9 , pp. 3076-3083
    • Michalowsky, L.A.1    Jones, P.A.2
  • 17
    • 0345357773 scopus 로고    scopus 로고
    • Gene silencing in cancer in association with promoter hypermethylation
    • Herman JG, Baylin SB. Gene silencing in cancer in association with promoter hypermethylation. N Engl J Med. 2003;349(21):2042-54.
    • (2003) N Engl J Med , vol.349 , Issue.21 , pp. 2042-2054
    • Herman, J.G.1    Baylin, S.B.2
  • 18
    • 0034720284 scopus 로고    scopus 로고
    • CpG methylation is maintained in human cancer cells lacking DNMT1
    • Rhee I, Jair KW, Yen RW, Lengauer C, Herman JG, Kinzler KW, et al. CpG methylation is maintained in human cancer cells lacking DNMT1. Nature. 2000;404(6781):1003-7.
    • (2000) Nature , vol.404 , Issue.6781 , pp. 1003-1007
    • Rhee, I.1    Jair, K.W.2    Yen, R.W.3    Lengauer, C.4    Herman, J.G.5    Kinzler, K.W.6
  • 19
    • 18344390653 scopus 로고    scopus 로고
    • DNMT1 and DNMT3b cooperate to silence genes in human cancer cells
    • Rhee I, Bachman KE, Park BH, Jair KW, Yen RW, Schuebel KE, et al. DNMT1 and DNMT3b cooperate to silence genes in human cancer cells. Nature. 2002;416(6880):552-6.
    • (2002) Nature , vol.416 , Issue.6880 , pp. 552-556
    • Rhee, I.1    Bachman, K.E.2    Park, B.H.3    Jair, K.W.4    Yen, R.W.5    Schuebel, K.E.6
  • 20
    • 0024595182 scopus 로고
    • The effect of gamma radiation on DNA methylation
    • Kalinich JF, Catravas GN, Snyder SL. The effect of gamma radiation on DNA methylation. Radiat Res. 1989;117(2):185-97.
    • (1989) Radiat Res , vol.117 , Issue.2 , pp. 185-197
    • Kalinich, J.F.1    Catravas, G.N.2    Snyder, S.L.3
  • 21
    • 0028286005 scopus 로고
    • DNA methylation and genomic imprinting
    • Razin A, Cedar H. DNA methylation and genomic imprinting. Cell. 1994;77(4):473-6.
    • (1994) Cell , vol.77 , Issue.4 , pp. 473-476
    • Razin, A.1    Cedar, H.2
  • 22
    • 84873490908 scopus 로고    scopus 로고
    • Radiation-induced hypomethylation triggers urokinase plasminogen activator transcription in meningioma cells
    • Velpula KK, Gogineni VR, Nalla AK, Dinh DH, Rao JS. Radiation-induced hypomethylation triggers urokinase plasminogen activator transcription in meningioma cells. Neoplasia. 2013;15(2):192-203.
    • (2013) Neoplasia , vol.15 , Issue.2 , pp. 192-203
    • Velpula, K.K.1    Gogineni, V.R.2    Nalla, A.K.3    Dinh, D.H.4    Rao, J.S.5
  • 23
    • 33845490045 scopus 로고    scopus 로고
    • Radiation-induced molecular changes in rat mammary tissue: possible implications for radiation-induced carcinogenesis
    • Loree J, Koturbash I, Kutanzi K, Baker M, Pogribny I, Kovalchuk O. Radiation-induced molecular changes in rat mammary tissue: possible implications for radiation-induced carcinogenesis. Int J Radiat Biol. 2006;82(11):805-15.
    • (2006) Int J Radiat Biol , vol.82 , Issue.11 , pp. 805-815
    • Loree, J.1    Koturbash, I.2    Kutanzi, K.3    Baker, M.4    Pogribny, I.5    Kovalchuk, O.6
  • 24
    • 84880982342 scopus 로고    scopus 로고
    • Radiation-induced epigenetic DNA methylation modification of radiation-response pathways
    • Antwih DA, Gabbara KM, Lancaster WD, Ruden DM, Zielske SP. Radiation-induced epigenetic DNA methylation modification of radiation-response pathways. Epigenetics. 2013;8(8):839-48.
    • (2013) Epigenetics , vol.8 , Issue.8 , pp. 839-848
    • Antwih, D.A.1    Gabbara, K.M.2    Lancaster, W.D.3    Ruden, D.M.4    Zielske, S.P.5
  • 25
    • 0030906551 scopus 로고    scopus 로고
    • Involvement of DNA methylation in the control of the expression of an estrogen-induced breast-cancer-associated protein (pS2) in human breast cancers
    • Martin V, Ribieras S, Song-Wang XG, Lasne Y, Frappart L, Rio MC, et al. Involvement of DNA methylation in the control of the expression of an estrogen-induced breast-cancer-associated protein (pS2) in human breast cancers. J Cell Biochem. 1997;65(1):95-106.
    • (1997) J Cell Biochem , vol.65 , Issue.1 , pp. 95-106
    • Martin, V.1    Ribieras, S.2    Song-Wang, X.G.3    Lasne, Y.4    Frappart, L.5    Rio, M.C.6
  • 26
    • 84864057017 scopus 로고    scopus 로고
    • Differential DNA methylation alterations in radiation-sensitive and -resistant cells
    • Chaudhry MA, Omaruddin RA. Differential DNA methylation alterations in radiation-sensitive and -resistant cells. DNA Cell Biol. 2012;31(6):908-16.
    • (2012) DNA Cell Biol , vol.31 , Issue.6 , pp. 908-916
    • Chaudhry, M.A.1    Omaruddin, R.A.2
  • 27
    • 77955924030 scopus 로고    scopus 로고
    • Global analysis of CpG methylation reveals epigenetic control of the radiosensitivity in lung cancer cell lines
    • Kim EH, Park AK, Dong SM, Ahn JH, Park WY. Global analysis of CpG methylation reveals epigenetic control of the radiosensitivity in lung cancer cell lines. Oncogene. 2010;29(33):4725-31.
    • (2010) Oncogene , vol.29 , Issue.33 , pp. 4725-4731
    • Kim, E.H.1    Park, A.K.2    Dong, S.M.3    Ahn, J.H.4    Park, W.Y.5
  • 28
    • 20444478652 scopus 로고    scopus 로고
    • Enhancement of in vitro and in vivo tumor cell radiosensitivity by the DNA methylation inhibitor zebularine
    • Dote H, Cerna D, Burgan WE, Carter DJ, Cerra MA, Hollingshead MG, et al. Enhancement of in vitro and in vivo tumor cell radiosensitivity by the DNA methylation inhibitor zebularine. Clin Cancer Res. 2005;11(12):4571-9.
    • (2005) Clin Cancer Res , vol.11 , Issue.12 , pp. 4571-4579
    • Dote, H.1    Cerna, D.2    Burgan, W.E.3    Carter, D.J.4    Cerra, M.A.5    Hollingshead, M.G.6
  • 29
    • 20144365768 scopus 로고    scopus 로고
    • Genetic association of the APP binding protein 2 gene (APBB2) with late onset Alzheimer disease
    • Li Y, Hollingworth P, Moore P, Foy C, Archer N, Powell J, et al. Genetic association of the APP binding protein 2 gene (APBB2) with late onset Alzheimer disease. Hum Mutat. 2005;25(3):270-7.
    • (2005) Hum Mutat , vol.25 , Issue.3 , pp. 270-277
    • Li, Y.1    Hollingworth, P.2    Moore, P.3    Foy, C.4    Archer, N.5    Powell, J.6
  • 30
    • 0037144438 scopus 로고    scopus 로고
    • Fe65, a ligand of the Alzheimer's beta-amyloid precursor protein, blocks cell cycle progression by down-regulating thymidylate synthase expression
    • Bruni P, Minopoli G, Brancaccio T, Napolitano M, Faraonio R, Zambrano N, et al. Fe65, a ligand of the Alzheimer's beta-amyloid precursor protein, blocks cell cycle progression by down-regulating thymidylate synthase expression. J Biol Chem. 2002;277(38):35481-8.
    • (2002) J Biol Chem , vol.277 , Issue.38 , pp. 35481-35488
    • Bruni, P.1    Minopoli, G.2    Brancaccio, T.3    Napolitano, M.4    Faraonio, R.5    Zambrano, N.6
  • 31
    • 10744224429 scopus 로고    scopus 로고
    • Both rare and common polymorphisms contribute functional variation at CHGA, a regulator of catecholamine physiology
    • Wen G, Mahata SK, Cadman P, Mahata M, Ghosh S, Mahapatra NR, et al. Both rare and common polymorphisms contribute functional variation at CHGA, a regulator of catecholamine physiology. Am J Hum Genet. 2004;74(2):197-207.
    • (2004) Am J Hum Genet , vol.74 , Issue.2 , pp. 197-207
    • Wen, G.1    Mahata, S.K.2    Cadman, P.3    Mahata, M.4    Ghosh, S.5    Mahapatra, N.R.6
  • 32
    • 22144495740 scopus 로고    scopus 로고
    • Hypertension from targeted ablation of chromogranin A can be rescued by the human ortholog
    • Mahapatra NR, O'Connor DT, Vaingankar SM, Hikim AP, Mahata M, Ray S, et al. Hypertension from targeted ablation of chromogranin A can be rescued by the human ortholog. J Clin Invest. 2005;115(7):1942-52.
    • (2005) J Clin Invest , vol.115 , Issue.7 , pp. 1942-1952
    • Mahapatra, N.R.1    O'Connor, D.T.2    Vaingankar, S.M.3    Hikim, A.P.4    Mahata, M.5    Ray, S.6
  • 34
    • 0034817108 scopus 로고    scopus 로고
    • Overexpression of connective tissue growth factor/hypertrophic chondrocyte-specific gene product 24 decreases bone density in adult mice and induces dwarfism
    • Nakanishi T, Yamaai T, Asano M, Nawachi K, Suzuki M, Sugimoto T, et al. Overexpression of connective tissue growth factor/hypertrophic chondrocyte-specific gene product 24 decreases bone density in adult mice and induces dwarfism. Biochem Biophys Res Commun. 2001;281(3):678-81.
    • (2001) Biochem Biophys Res Commun , vol.281 , Issue.3 , pp. 678-681
    • Nakanishi, T.1    Yamaai, T.2    Asano, M.3    Nawachi, K.4    Suzuki, M.5    Sugimoto, T.6
  • 35
    • 15744398433 scopus 로고    scopus 로고
    • Identification of LAT4, a novel amino acid transporter with system L activity
    • Bodoy S, Martin L, Zorzano A, Palacin M, Estevez R, Bertran J. Identification of LAT4, a novel amino acid transporter with system L activity. J Biol Chem. 2005;280(12):12002-11.
    • (2005) J Biol Chem , vol.280 , Issue.12 , pp. 12002-12011
    • Bodoy, S.1    Martin, L.2    Zorzano, A.3    Palacin, M.4    Estevez, R.5    Bertran, J.6
  • 36
    • 79958754527 scopus 로고    scopus 로고
    • Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome
    • Sandoval J, Heyn H, Moran S, Serra-Musach J, Pujana MA, Bibikova M, et al. Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome. Epigenetics. 2011;6(6):692-702.
    • (2011) Epigenetics , vol.6 , Issue.6 , pp. 692-702
    • Sandoval, J.1    Heyn, H.2    Moran, S.3    Serra-Musach, J.4    Pujana, M.A.5    Bibikova, M.6
  • 37
    • 84903726474 scopus 로고    scopus 로고
    • Epigenetically regulated MIR941 and MIR1247 target gastric cancer cell growth and migration
    • Kim JG, Kim TO, Bae JH, Shim JW, Kang MJ, Yang K, et al. Epigenetically regulated MIR941 and MIR1247 target gastric cancer cell growth and migration. Epigenetics. 2014;9(7):1018-30.
    • (2014) Epigenetics , vol.9 , Issue.7 , pp. 1018-1030
    • Kim, J.G.1    Kim, T.O.2    Bae, J.H.3    Shim, J.W.4    Kang, M.J.5    Yang, K.6
  • 38
    • 0035694469 scopus 로고    scopus 로고
    • Acetylation of p53 activates transcription through recruitment of coactivators/histone acetyltransferases
    • Barlev NA, Liu L, Chehab NH, Mansfield K, Harris KG, Halazonetis TD, et al. Acetylation of p53 activates transcription through recruitment of coactivators/histone acetyltransferases. Mol Cell. 2001;8(6):1243-54.
    • (2001) Mol Cell , vol.8 , Issue.6 , pp. 1243-1254
    • Barlev, N.A.1    Liu, L.2    Chehab, N.H.3    Mansfield, K.4    Harris, K.G.5    Halazonetis, T.D.6


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