Automated 3D RNA structure prediction using the RNAComposer method for riboswitches1

Methods in Enzymology

Volumn 553, Issue , 2015, Pages 3-34

  Purzycka, K J ^a   Popenda, M ^a   Szachniuk, M ^a,b   Antczak, M ^b   Lukasiak, P ^a,b   Blazewicz, J ^a,b   Adamiak, R W ^a,b  

^a INSTITUTE OF BIOORGANIC CHEMISTRY   (Poland)

^b POZNAN UNIVERSITY OF TECHNOLOGY   (Poland)

Author keywords

3D structure; c di GMP II riboswitch; Riboswitches; RNA; RNAComposer; Structure prediction

Indexed keywords

RNA; BACTERIAL RNA; BIS(3',5')-CYCLIC DIGUANYLIC ACID; CYCLIC GMP; RIBOSWITCH;

AUTOMATION; BACILLUS HALODURANS; CLOSTRIDIUM ACETOBUTYLICUM; MICROSCOPY; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PEPTOCLOSTRIDIUM DIFFICILE; PREDICTION; PRIORITY JOURNAL; QUALITY CONTROL; REVIEW; RIBOSWITCH; RNA ANALYSIS; RNA STRUCTURE; THERMUS AQUATICUS; WEB BROWSER; X RAY CRYSTALLOGRAPHY; ANALOGS AND DERIVATIVES; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER PROGRAM; CONFORMATION; GENETICS; INTERNET; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE;

BACILLUS HALODURANS; CLOSTRIDIUM ACETOBUTYLICUM; CLOSTRIDIUM DIFFICILE; THERMUS AQUATICUS;

BASE SEQUENCE; CLOSTRIDIUM ACETOBUTYLICUM; CLOSTRIDIUM DIFFICILE; CYCLIC GMP; INTERNET; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; RIBOSWITCH; RNA; RNA, BACTERIAL; SOFTWARE;

EID: 84923597377     PISSN: 00766879     EISSN: 15577988     Source Type: Book Series    
DOI: 10.1016/bs.mie.2014.10.050     Document Type: Chapter

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