Specific enrichment of phosphoproteins using functionalized multivalent nanoparticles

Journal of the American Chemical Society

Volumn 137, Issue 7, 2015, Pages 2432-2435

  Hwang, Leekyoung ^a   Ayaz Guner, Serife ^b   Gregorich, Zachery R ^a,b   Cai, Wenxuan ^a,b   Valeja, Santosh G ^b   Jin, Song ^a   Ge, Ying ^a,b  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

^b UNIVERSITY OF WISCONSIN SCHOOL OF MEDICINE AND PUBLIC HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MASS SPECTROMETRY; PHOSPHORYLATION;

COMPREHENSIVE ANALYSIS; HIGH SPECIFICITY; MASS SPECTROMETRY ANALYSIS; MULTIVALENT LIGANDS; PHOSPHATE GROUP; PROTEIN PHOSPHORYLATION; SDS-PAGE ANALYSIS; SUPERPARAMAGNETIC NANOPARTICLES;

NANOPARTICLES;

LIGAND; MAGNETIC NANOPARTICLE; PHOSPHATE; PHOSPHOPROTEIN; MAGNETITE NANOPARTICLE;

ANIMAL TISSUE; ARTICLE; CELL LYSATE; CIRCULAR DICHROISM; CONTROLLED STUDY; ELUTION; EXPERIMENTAL PIG; HEART; HEK293 CELL LINE; HUMAN; HUMAN CELL; INFRARED SPECTROSCOPY; MASS SPECTROMETRY; NONHUMAN; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN BINDING; PROTEIN PHOSPHORYLATION; REVERSED PHASE LIQUID CHROMATOGRAPHY; SOLUBILITY; SURFACE PROPERTY; SYNTHESIS; THERMOGRAVIMETRY; TRANSMISSION ELECTRON MICROSCOPY; X RAY POWDER DIFFRACTION;

LIGANDS; MAGNETITE NANOPARTICLES; PHOSPHOPROTEINS;

EID: 84923557164     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja511833y     Document Type: Article

References (35)

1. Hunter, T. Cell 2000, 100, 113
2. Tan, C. S. H.; Bodenmiller, B.; Pasculescu, A.; Jovanovic, M.; Hengartner, M. O.; Jørgensen, C.; Bader, G. D.; Aebersold, R.; Pawson, T.; Linding, R. Sci. Signal. 2009, 2, ra39
3. Zhang, J.; Guy, M. J.; Norman, H. S.; Chen, Y.-C.; Xu, Q.; Dong, X.; Guner, H.; Wang, S.; Kohmoto, T.; Young, K. H.; Moss, R. L.; Ge, Y. J. Proteome Res. 2011, 10, 4054
4. Huang, P. H.; Mukasa, A.; Bonavia, R.; Flynn, R. A.; Brewer, Z. E.; Cavenee, W. K.; Furnari, F. B.; White, F. M. Proc. Natl. Acad. Sci. U. S. A. 2007, 104, 12867
5. Nita-Lazar, A.; Saito-Benz, H.; White, F. M. Proteomics 2008, 8, 4433
6. Mann, M.; Ong, S.-E.; Grønborg, M.; Steen, H.; Jensen, O. N.; Pandey, A. Trends Biotechnol. 2002, 20, 261
7. Zhou, H.; Watts, J. D.; Aebersold, R. Nat. Biotechnol. 2001, 19, 375
8. Tao, W. A.; Wollscheid, B.; O'Brien, R.; Eng, J. K.; Li, X.-j.; Bodenmiller, B.; Watts, J. D.; Hood, L.; Aebersold, R. Nat. Methods 2005, 2, 591
9. Bodenmiller, B.; Mueller, L. N.; Mueller, M.; Domon, B.; Aebersold, R. Nat. Methods 2007, 4, 231
10. Nelson, C. A.; Szczech, J. R.; Dooley, C. J.; Xu, Q.; Lawrence, M. J.; Zhu, H.; Jin, S.; Ge, Y. Anal. Chem. 2010, 82, 7193
11. Nelson, C. A.; Szczech, J. R.; Xu, Q.; Lawrence, M. J.; Jin, S.; Ge, Y. Chem. Commun. 2009, 6607
12. Siuti, N.; Kelleher, N. L. Nat. Methods 2007, 4, 817
13. Ge, Y.; Rybakova, I. N.; Xu, Q.; Moss, R. L. Proc. Natl. Acad. Sci.U. S. A. 2009, 106, 12658
14. Schmidt, S. R.; Schweikart, F.; Andersson, M. E. J. Chromatogr., B 2007, 849, 154
15. Oda, Y.; Nagasu, T.; Chait, B. T. Nat. Biotechnol. 2001, 19, 379
16. Porath, J.; Carlsson, J. A. N.; Olsson, I.; Belfrage, G. Nature 1975, 258, 598
17. Kaur-Atwal, G.; Weston, D. J.; Bonner, P. L. R.; Crosland, S.; Green, P. S.; Creaser, C. S. Curr. Anal. Chem. 2008, 4, 127
18. Rosi, N. L.; Mirkin, C. A. Chem. Rev. 2005, 105, 1547
19. Gao, J.; Gu, H.; Xu, B. Acc. Chem. Res. 2009, 42, 1097
20. Pan, Y.; Du, X.; Zhao, F.; Xu, B. Chem. Soc. Rev. 2012, 41, 2912
21. Pan, Y.; Long, M. J. C.; Lin, H.-C.; Hedstrom, L.; Xu, B. Chem. Sci. 2012, 3, 3495
22. Aubin-Tam, M.-E.; Hamad-Schifferli, K. Biomed. Mater. 2008, 3, 034001
23. Sun, S. Adv. Mater. 2006, 18, 393
24. Kinoshita, E.; Kinoshita-Kikuta, E.; Takiyama, K.; Koike, T. Mol. Cell. Proteomics 2006, 5, 749
25. Kinoshita, E.; Kinoshita-Kikuta, E.; Koike, T. Nat. Protoc. 2009, 4, 1513
26. Kinoshita, E.; Kinoshita-Kikuta, E. Proteomics 2011, 11, 319
27. Sun, S.; Zeng, H.; Robinson, D. B.; Raoux, S.; Rice, P. M.; Wang, S. X.; Li, G. J. Am. Chem. Soc. 2003, 126, 273
28. De Palma, R.; Peeters, S.; Van Bael, M. J.; Van den Rul, H.; Bonroy, K.; Laureyn, W.; Mullens, J.; Borghs, G.; Maes, G. Chem. Mater. 2007, 19, 1821
29. Jana, N. R.; Earhart, C.; Ying, J. Y. Chem. Mater. 2007, 19, 5074
30. Karakoti, A. S.; Das, S.; Thevuthasan, S.; Seal, S. Angew. Chem., Int. Ed. 2011, 50, 1980
31. Ojida, A.; Honda, K.; Shinmi, D.; Kiyonaka, S.; Mori, Y.; Hamachi, I. J. Am. Chem. Soc. 2006, 128, 10452
32. Trompeter, H.-I.; Blankenburg, G.; Brügger, B.; Menne, J.; Schiermeyer, A.; Scholz, M.; Söling, H.-D. J. Biol. Chem. 1996, 271, 1187
33. Compton, P. D.; Zamdborg, L.; Thomas, P. M.; Kelleher, N. L. Anal. Chem. 2011, 83, 6868
34. Xiu, L.; Valeja, S. G.; Alpert, A. J.; Jin, S.; Ge, Y. Anal. Chem. 2014, 86, 7899
35. Mammen, M.; Choi, S.-K.; Whitesides, G. M. Angew. Chem., Int. Ed. 1998, 37, 2754