메뉴 건너뛰기




Volumn 112, Issue 7, 2015, Pages E607-E615

Highly multiplexed profiling of single-cell effector functions reveals deep functional heterogeneity in response to pathogenic ligands

Author keywords

Cellular heterogeneity; Cytokine; Immune effector function; Single cell analysis; Toll like receptor activation

Indexed keywords

CARBON TETRACHLORIDE; DIMETICONE; INTERLEUKIN 10; INTERLEUKIN 6; INTERLEUKIN 8; LIGAND; LIPOPOLYSACCHARIDE; MACROPHAGE INFLAMMATORY PROTEIN 1ALPHA; MACROPHAGE MIGRATION INHIBITION FACTOR; TOLL LIKE RECEPTOR 4; TLR4 PROTEIN, HUMAN;

EID: 84923132388     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1416756112     Document Type: Article
Times cited : (228)

References (38)
  • 1
    • 77952474987 scopus 로고    scopus 로고
    • Cellular heterogeneity: Do differences make a difference?
    • Altschuler SJ, Wu LF (2010) Cellular heterogeneity: Do differences make a difference? Cell 141(4):559-563.
    • (2010) Cell , vol.141 , Issue.4 , pp. 559-563
    • Altschuler, S.J.1    Wu, L.F.2
  • 2
    • 70549093092 scopus 로고    scopus 로고
    • Non-genetic cell-to-cell variability and the consequences for pharmacology
    • Niepel M, Spencer SL, Sorger PK (2009) Non-genetic cell-to-cell variability and the consequences for pharmacology. Curr Opin Chem Biol 13(5-6):556-561.
    • (2009) Curr Opin Chem Biol , vol.13 , Issue.5-6 , pp. 556-561
    • Niepel, M.1    Spencer, S.L.2    Sorger, P.K.3
  • 3
    • 48449098623 scopus 로고    scopus 로고
    • Cancer cells display profound intra- and interline variation following prolonged exposure to antimitotic drugs
    • Gascoigne KE, Taylor SS (2008) Cancer cells display profound intra- and interline variation following prolonged exposure to antimitotic drugs. Cancer Cell 14(2): 111-122.
    • (2008) Cancer Cell , vol.14 , Issue.2 , pp. 111-122
    • Gascoigne, K.E.1    Taylor, S.S.2
  • 4
    • 57349097152 scopus 로고    scopus 로고
    • Dynamic proteomics of individual cancer cells in response to a drug
    • Cohen AA, et al. (2008) Dynamic proteomics of individual cancer cells in response to a drug. Science 322(5907):1511-1516.
    • (2008) Science , vol.322 , Issue.5907 , pp. 1511-1516
    • Cohen, A.A.1
  • 5
    • 84878997106 scopus 로고    scopus 로고
    • Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
    • Shalek AK, et al. (2013) Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. Nature 498(7453):236-240.
    • (2013) Nature , vol.498 , Issue.7453 , pp. 236-240
    • Shalek, A.K.1
  • 6
    • 41149096579 scopus 로고    scopus 로고
    • T-cell quality in memory and protection: Implications for vaccine design
    • Seder RA, Darrah PA, Roederer M (2008) T-cell quality in memory and protection: Implications for vaccine design. Nat Rev Immunol 8(4):247-258.
    • (2008) Nat Rev Immunol , vol.8 , Issue.4 , pp. 247-258
    • Seder, R.A.1    Darrah, P.A.2    Roederer, M.3
  • 7
    • 79955750055 scopus 로고    scopus 로고
    • Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum
    • Bendall SC, et al. (2011) Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum. Science 332(6030):687-696.
    • (2011) Science , vol.332 , Issue.6030 , pp. 687-696
    • Bendall, S.C.1
  • 8
    • 80555153902 scopus 로고    scopus 로고
    • Dual- and triple-color fluorospot
    • Ahlborg N, Axelsson B (2012) Dual- and triple-color fluorospot. Methods Mol Biol 792: 77-85.
    • (2012) Methods Mol Biol , vol.792 , pp. 77-85
    • Ahlborg, N.1    Axelsson, B.2
  • 9
    • 51249106861 scopus 로고    scopus 로고
    • Concurrent detection of secreted products from human lymphocytes by microengraving: Cytokines and antigen-reactive antibodies
    • Bradshaw EM, et al. (2008) Concurrent detection of secreted products from human lymphocytes by microengraving: Cytokines and antigen-reactive antibodies. Clin Immunol 129(1):10-18.
    • (2008) Clin Immunol , vol.129 , Issue.1 , pp. 10-18
    • Bradshaw, E.M.1
  • 10
    • 0035126095 scopus 로고    scopus 로고
    • 11-color, 13-parameter flow cytometry: Identification of human naive T cells by phenotype, function, and T-cell receptor diversity
    • De Rosa SC, Herzenberg LA, Herzenberg LA, Roederer M (2001) 11-color, 13-parameter flow cytometry: Identification of human naive T cells by phenotype, function, and T-cell receptor diversity. Nat Med 7(2):245-248.
    • (2001) Nat Med , vol.7 , Issue.2 , pp. 245-248
    • De Rosa, S.C.1    Herzenberg, L.A.2    Herzenberg, L.A.3    Roederer, M.4
  • 11
    • 57449085941 scopus 로고    scopus 로고
    • Integrated barcode chips for rapid, multiplexed analysis of proteins in microliter quantities of blood
    • Fan R, et al. (2008) Integrated barcode chips for rapid, multiplexed analysis of proteins in microliter quantities of blood. Nat Biotechnol 26(12):1373-1378.
    • (2008) Nat Biotechnol , vol.26 , Issue.12 , pp. 1373-1378
    • Fan, R.1
  • 12
    • 79958122357 scopus 로고    scopus 로고
    • A clinical microchip for evaluation of single immune cells reveals high functional heterogeneity in phenotypically similar T cells
    • Ma C, et al. (2011) A clinical microchip for evaluation of single immune cells reveals high functional heterogeneity in phenotypically similar T cells. Nat Med 17(6): 738-743.
    • (2011) Nat Med , vol.17 , Issue.6 , pp. 738-743
    • Ma, C.1
  • 13
    • 84874068247 scopus 로고    scopus 로고
    • High-throughput secretomic analysis of single cells to assess functional cellular heterogeneity
    • Lu Y, et al. (2013) High-throughput secretomic analysis of single cells to assess functional cellular heterogeneity. Anal Chem 85(4):2548-2556.
    • (2013) Anal Chem , vol.85 , Issue.4 , pp. 2548-2556
    • Lu, Y.1
  • 14
    • 84856004321 scopus 로고    scopus 로고
    • Single-cell proteomic chip for profiling intracellular signaling pathways in single tumor cells
    • Shi Q, et al. (2012) Single-cell proteomic chip for profiling intracellular signaling pathways in single tumor cells. Proc Natl Acad Sci USA 109(2):419-424.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.2 , pp. 419-424
    • Shi, Q.1
  • 15
    • 84898012347 scopus 로고    scopus 로고
    • Conversion of danger signals into cytokine signals by hematopoietic stem and progenitor cells for regulation of stress-induced hematopoiesis
    • Zhao JL, et al. (2014) Conversion of danger signals into cytokine signals by hematopoietic stem and progenitor cells for regulation of stress-induced hematopoiesis. Cell Stem Cell 14(4):445-459.
    • (2014) Cell Stem Cell , vol.14 , Issue.4 , pp. 445-459
    • Zhao, J.L.1
  • 16
    • 28544446111 scopus 로고    scopus 로고
    • Monocyte and macrophage heterogeneity
    • Gordon S, Taylor PR (2005) Monocyte and macrophage heterogeneity. Nat Rev Immunol 5(12):953-964.
    • (2005) Nat Rev Immunol , vol.5 , Issue.12 , pp. 953-964
    • Gordon, S.1    Taylor, P.R.2
  • 17
    • 56749174940 scopus 로고    scopus 로고
    • Exploring the full spectrum of macrophage activation
    • Mosser DM, Edwards JP (2008) Exploring the full spectrum of macrophage activation. Nat Rev Immunol 8(12):958-969.
    • (2008) Nat Rev Immunol , vol.8 , Issue.12 , pp. 958-969
    • Mosser, D.M.1    Edwards, J.P.2
  • 18
    • 84876800337 scopus 로고    scopus 로고
    • Macrophage biology in development, homeostasis and disease
    • Wynn TA, Chawla A, Pollard JW (2013) Macrophage biology in development, homeostasis and disease. Nature 496(7446):445-455.
    • (2013) Nature , vol.496 , Issue.7446 , pp. 445-455
    • Wynn, T.A.1    Chawla, A.2    Pollard, J.W.3
  • 19
    • 0037351927 scopus 로고    scopus 로고
    • Toll-like receptor-4 (TLR4) signaling augments chemokineinduced neutrophil migration by modulating cell surface expression of chemokine receptors
    • Fan J, Malik AB (2003) Toll-like receptor-4 (TLR4) signaling augments chemokineinduced neutrophil migration by modulating cell surface expression of chemokine receptors. Nat Med 9(3):315-321.
    • (2003) Nat Med , vol.9 , Issue.3 , pp. 315-321
    • Fan, J.1    Malik, A.B.2
  • 20
    • 68349117545 scopus 로고    scopus 로고
    • Cytokine secretion in macrophages and other cells: Pathways and mediators
    • Stow JL, Low PC, Offenhäuser C, Sangermani D (2009) Cytokine secretion in macrophages and other cells: Pathways and mediators. Immunobiology 214(7):601-612.
    • (2009) Immunobiology , vol.214 , Issue.7 , pp. 601-612
    • Stow, J.L.1    Low, P.C.2    Offenhäuser, C.3    Sangermani, D.4
  • 21
    • 0035924325 scopus 로고    scopus 로고
    • MIF regulates innate immune responses through modulation of Toll-like receptor 4
    • Roger T, David J, Glauser MP, Calandra T (2001) MIF regulates innate immune responses through modulation of Toll-like receptor 4. Nature 414(6866):920-924.
    • (2001) Nature , vol.414 , Issue.6866 , pp. 920-924
    • Roger, T.1    David, J.2    Glauser, M.P.3    Calandra, T.4
  • 22
    • 0142259734 scopus 로고    scopus 로고
    • Macrophage migration inhibitory factor: A regulator of innate immunity
    • Calandra T, Roger T (2003) Macrophage migration inhibitory factor: A regulator of innate immunity. Nat Rev Immunol 3(10):791-800.
    • (2003) Nat Rev Immunol , vol.3 , Issue.10 , pp. 791-800
    • Calandra, T.1    Roger, T.2
  • 23
    • 7644231561 scopus 로고    scopus 로고
    • The chemokine system in diverse forms of macrophage activation and polarization
    • Mantovani A, et al. (2004) The chemokine system in diverse forms of macrophage activation and polarization. Trends Immunol 25(12):677-686.
    • (2004) Trends Immunol , vol.25 , Issue.12 , pp. 677-686
    • Mantovani, A.1
  • 24
    • 84857126819 scopus 로고    scopus 로고
    • Polyfunctional responses by human T cells result from sequential release of cytokines
    • Han Q, et al. (2012) Polyfunctional responses by human T cells result from sequential release of cytokines. Proc Natl Acad Sci USA 109(5):1607-1612.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.5 , pp. 1607-1612
    • Han, Q.1
  • 25
    • 84857978200 scopus 로고    scopus 로고
    • + T cells using microengraving
    • + T cells using microengraving. Proc Natl Acad Sci USA 109(10):3885-3890.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.10 , pp. 3885-3890
    • Varadarajan, N.1
  • 26
    • 77952635983 scopus 로고    scopus 로고
    • Multidimensional analysis of the frequencies and rates of cytokine secretion from single cells by quantitative microengraving
    • Han Q, Bradshaw EM, Nilsson B, Hafler DA, Love JC (2010) Multidimensional analysis of the frequencies and rates of cytokine secretion from single cells by quantitative microengraving. Lab Chip 10(11):1391-1400.
    • (2010) Lab Chip , vol.10 , Issue.11 , pp. 1391-1400
    • Han, Q.1    Bradshaw, E.M.2    Nilsson, B.3    Hafler, D.A.4    Love, J.C.5
  • 27
    • 11144325691 scopus 로고
    • Partial least-squares regression: A tutorial
    • Geladi P, Kowalski BR (1986) Partial least-squares regression: A tutorial. Anal Chim Acta 185:1-17.
    • (1986) Anal Chim Acta , vol.185 , pp. 1-17
    • Geladi, P.1    Kowalski, B.R.2
  • 28
    • 40449141013 scopus 로고    scopus 로고
    • What is principal component analysis?
    • Ringnér M (2008) What is principal component analysis? Nat Biotechnol 26(3):303-304.
    • (2008) Nat Biotechnol , vol.26 , Issue.3 , pp. 303-304
    • Ringnér, M.1
  • 30
    • 84880280631 scopus 로고    scopus 로고
    • ViSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia
    • Amirel-AD, et al. (2013) viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia. Nat Biotechnol 31(6):545-552.
    • (2013) Nat Biotechnol , vol.31 , Issue.6 , pp. 545-552
    • Amirel, A.D.1
  • 31
    • 57249084011 scopus 로고    scopus 로고
    • Visualizing data using t-SNE
    • Van der Maaten L, Hinton G (2008) Visualizing Data using t-SNE. J Mach Learn Res 9(11):2579-2605.
    • (2008) J Mach Learn Res , vol.9 , Issue.11 , pp. 2579-2605
    • Van Der-Maaten, L.1    Hinton, G.2
  • 32
    • 84862104611 scopus 로고    scopus 로고
    • Defining GM-CSF- and macrophage-CSF-dependent macrophage responses by in vitro models
    • Lacey DC, et al. (2012) Defining GM-CSF- and macrophage-CSF-dependent macrophage responses by in vitro models. J Immunol 188(11):5752-5765.
    • (2012) J Immunol , vol.188 , Issue.11 , pp. 5752-5765
    • Lacey, D.C.1
  • 33
    • 84899645410 scopus 로고    scopus 로고
    • Glioblastoma cellular architectures are predicted through the characterization of two-cell interactions
    • Kravchenko-Balasha N, Wang J, Remacle F, Levine RD, Heath JR (2014) Glioblastoma cellular architectures are predicted through the characterization of two-cell interactions. Proc Natl Acad Sci USA 111(17):6521-6526.
    • (2014) Proc Natl Acad Sci USA , vol.111 , Issue.17 , pp. 6521-6526
    • Kravchenko-Balasha, N.1    Wang, J.2    Remacle, F.3    Levine, R.D.4    Heath, J.R.5
  • 34
    • 84870891611 scopus 로고    scopus 로고
    • Quantitating cell-cell interaction functions with applications to glioblastoma multiforme cancer cells
    • Wang J, et al. (2012) Quantitating cell-cell interaction functions with applications to glioblastoma multiforme cancer cells. Nano Lett 12(12):6101-6106.
    • (2012) Nano Lett , vol.12 , Issue.12 , pp. 6101-6106
    • Wang, J.1
  • 37
    • 84871297843 scopus 로고    scopus 로고
    • Next-generation proteomics: Towards an integrative view of proteome dynamics
    • Altelaar AF, Munoz J, Heck AJ (2013) Next-generation proteomics: Towards an integrative view of proteome dynamics. Nat Rev Genet 14(1):35-48.
    • (2013) Nat Rev Genet , vol.14 , Issue.1 , pp. 35-48
    • Altelaar, A.F.1    Munoz, J.2    Heck, A.J.3
  • 38
    • 33644833555 scopus 로고    scopus 로고
    • Mapping normal and cancer cell signalling networks: Towards single-cell proteomics
    • Irish JM, Kotecha N, Nolan GP (2006) Mapping normal and cancer cell signalling networks: Towards single-cell proteomics. Nat Rev Cancer 6(2):146-155.
    • (2006) Nat Rev Cancer , vol.6 , Issue.2 , pp. 146-155
    • Irish, J.M.1    Kotecha, N.2    Nolan, G.P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.