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Volumn 21, Issue 6, 2014, Pages 695-710

An integrated genomic approach for rapid delineation of candidate genes regulating agro-morphological traits in chickpea

Author keywords

Chickpea; QTLs; SNP; SSR; Transcription factor; Wild

Indexed keywords

TRANSCRIPTION FACTOR;

EID: 84922450139     PISSN: 13402838     EISSN: 17561663     Source Type: Journal    
DOI: 10.1093/dnares/dsu031     Document Type: Article
Times cited : (71)

References (89)
  • 2
    • 84922463365 scopus 로고
    • Breeding for stress tolerance in cool season food legume
    • Singh, K.B. and Saxena, M.C. (eds.) Wiley, Chichester, UK
    • Muehlbauer, F.J. 1993, Breeding for stress tolerance in cool season food legume, In: Singh, K.B. and Saxena, M.C. (eds.), Use of wild species as a source of resistance in cool-season food legume crops. Wiley, Chichester, UK, pp. 359-72.
    • (1993) Use of Wild Species As A Source of Resistance in Cool-season Food Legume Crops , pp. 359-372
    • Muehlbauer, F.J.1
  • 3
    • 84890173915 scopus 로고    scopus 로고
    • Chickpea breeding and management
    • Yadav, S.S., Redden, R.J., Chen, W. and Sharma, B. (eds.) CAB International Publishing, UK
    • Berger, J.D. and Turner, N.C. 2007, Chickpea breeding and management, In: Yadav, S.S., Redden, R.J., Chen, W. and Sharma, B. (eds.), The ecology of chickpea. CAB International Publishing, UK, pp. 47-71.
    • (2007) The Ecology of Chickpea , pp. 47-71
    • Berger, J.D.1    Turner, N.C.2
  • 4
    • 0001390156 scopus 로고
    • Genetic relationships among the annual species of Cicer L
    • Ladizinsky, G. and Adler, A. 1976a, Genetic relationships among the annual species of Cicer L, Theor. App. Genet., 48, 197-203.
    • (1976) Theor. App. Genet. , vol.48 , pp. 197-203
    • Ladizinsky, G.1    Adler, A.2
  • 5
    • 0000663893 scopus 로고
    • The origin of chickpea Cicer arietinum L
    • Ladizinsky, G. and Adler, A. 1976b, The origin of chickpea Cicer arietinum L, Euphytica, 25, 211-17.
    • (1976) Euphytica , vol.25 , pp. 211-217
    • Ladizinsky, G.1    Adler, A.2
  • 6
    • 51249171246 scopus 로고
    • Nuclear DNA content of some important plant species
    • Arumuganathan, K. and Earle, E.D. 1991, Nuclear DNA content of some important plant species, Plant Mol. Biol. Rep., 9, 208-18.
    • (1991) Plant Mol. Biol. Rep. , vol.9 , pp. 208-218
    • Arumuganathan, K.1    Earle, E.D.2
  • 7
    • 0001622962 scopus 로고
    • Towards a rational classification of cultivated plants
    • Harlan, J.R. and de Wet, J.M.J. 1971, Towards a rational classification of cultivated plants, Taxon, 20, 509-17.
    • (1971) Taxon , vol.20 , pp. 509-517
    • Harlan, J.R.1    De Wet, J.M.J.2
  • 8
    • 0033694577 scopus 로고    scopus 로고
    • A linkage map of the chickpea (Cicer arietinum L) genome based on the recombinant inbred lines from a C arietinum xC reticulatum cross, localization of resistance genes for Fusarium races 4 and 5
    • Winter, P., Benko-Iseppon, A.M., Huttel, B., et al. 2000, A linkage map of the chickpea (Cicer arietinum L.) genome based on the recombinant inbred lines from a C. arietinum xC. reticulatum cross, localization of resistance genes for Fusarium races 4 and 5, Theor. Appl. Genet., 101, 1155-63.
    • (2000) Theor. Appl. Genet. , vol.101 , pp. 1155-1163
    • Winter, P.1    Benko-Iseppon, A.M.2    Huttel, B.3
  • 9
    • 0002122041 scopus 로고
    • Allozyme variation and phylogeny in annual species of Cicer (Leguminosae)
    • Kazan, K. and Muehlbauer, F.J. 1991, Allozyme variation and phylogeny in annual species of Cicer (Leguminosae), PlantSyst. Evol., 175, 11-21.
    • (1991) PlantSyst. Evol. , vol.175 , pp. 11-21
    • Kazan, K.1    Muehlbauer, F.J.2
  • 10
    • 34249762875 scopus 로고
    • Potential for wild species in cold season food legume breeding
    • Muehlbauer, F.J., Kiser, W.J. and Simon, C.J. 1994, Potential for wild species in cold season food legume breeding, Euphytica, 73, 109-14.
    • (1994) Euphytica , vol.73 , pp. 109-114
    • Muehlbauer, F.J.1    Kiser, W.J.2    Simon, C.J.3
  • 11
    • 0030868060 scopus 로고    scopus 로고
    • Exploitation of wild Cicer species for yield improvement in chickpea
    • Singh, K.B. and Ocampo, B. 1997, Exploitation of wild Cicer species for yield improvement in chickpea, Theor. Appl. Genet., 95, 418-23.
    • (1997) Theor. Appl. Genet. , vol.95 , pp. 418-423
    • Singh, K.B.1    Ocampo, B.2
  • 12
    • 0028814589 scopus 로고
    • Additional sources of tolerance to cold in cultivated and wild Cicer species
    • Singh, K.B., Malhotra, R.S. and Saxena, M.C. 1995, Additional sources of tolerance to cold in cultivated and wild Cicer species, Crop Sci., 35, 1491-7.
    • (1995) Crop Sci. , vol.35 , pp. 1491-1497
    • Singh, K.B.1    Malhotra, R.S.2    Saxena, M.C.3
  • 13
    • 0033971595 scopus 로고    scopus 로고
    • A major gene for time of flowering in chickpea
    • Kumar, J. and Van Rheenen, H.A. 2000, A major gene for time of flowering in chickpea, J. Hered., 91, 67-8.
    • (2000) J. Hered. , vol.91 , pp. 67-68
    • Kumar, J.1    Van Rheenen, H.A.2
  • 14
    • 84958635411 scopus 로고    scopus 로고
    • Using genomics to exploit grain legume biodiversity in crop improvement
    • Dwivedi, S.L., Blair, M.W., Upadhyaya, H.D., et al. 2005, Using genomics to exploit grain legume biodiversity in crop improvement, Plant Breed. Rev., 26, 171-357.
    • (2005) Plant Breed. Rev. , vol.26 , pp. 171-357
    • Dwivedi, S.L.1    Blair, M.W.2    Upadhyaya, H.D.3
  • 15
  • 16
  • 17
    • 84855716293 scopus 로고    scopus 로고
    • Genomic tools and germplasm diversity for chickpea improvement
    • Upadhyaya, H.D., Thudi, M., Dronavalli, N., et al. 2011, Genomic tools and germplasm diversity for chickpea improvement, Plant Genet. Resour., 9, 45-58.
    • (2011) Plant Genet. Resour. , vol.9 , pp. 45-58
    • Upadhyaya, H.D.1    Thudi, M.2    Dronavalli, N.3
  • 18
    • 0041374092 scopus 로고    scopus 로고
    • Preliminary investigation of QTLs associated with seedling resistanceto Ascochyta blight from Cicer echinos-permum: A wild relative of chickpea
    • Collard, B.C.Y., Pang, E.C.K., Ades, P.K. and Taylor, P.W.J. 2003, Preliminary investigation of QTLs associated with seedling resistanceto Ascochyta blight from Cicer echinos-permum: a wild relative of chickpea, Theor. Appl. Genet., 107, 719-29.
    • (2003) Theor. Appl. Genet. , vol.107 , pp. 719-729
    • Collard, B.C.Y.1    Pang, E.C.K.2    Ades, P.K.3    Taylor, P.W.J.4
  • 19
    • 0032877640 scopus 로고    scopus 로고
    • Characterization and mapping of sequence-tagged microsatellite sites in the chickpea (C arietinum L)
    • Winter, P., Pfaff, T., Udupa, S.M., et al. 1999, Characterization and mapping of sequence-tagged microsatellite sites in the chickpea (C. arietinum L.), Mol. Gen. Genet., 262, 90-101.
    • (1999) Mol. Gen. Genet. , vol.262 , pp. 90-101
    • Winter, P.1    Pfaff, T.2    Udupa, S.M.3
  • 20
    • 18944385543 scopus 로고    scopus 로고
    • The use of microsatellite markers in the annual and perennial Cicer species growing in Turkey
    • Cingilli, H., Altinkut, A. and Akcin, A. 2005, The use of microsatellite markers in the annual and perennial Cicer species growing in Turkey, Biologia Sect. Bot., 60, 93-8.
    • (2005) Biologia Sect. Bot. , vol.60 , pp. 93-98
    • Cingilli, H.1    Altinkut, A.2    Akcin, A.3
  • 21
    • 29144500432 scopus 로고    scopus 로고
    • Identification of microsatellite markers from Cicer reticu-latum: Molecular variation and phylogenetic analysis
    • Sethy, N.K., Choudhary, S., Shokeen, B. and Bhatia, S.2006, Identification of microsatellite markers from Cicer reticu-latum: molecular variation and phylogenetic analysis, Theor. Appl. Genet., 112, 347-57.
    • (2006) Theor. Appl. Genet. , vol.112 , pp. 347-357
    • Sethy, N.K.1    Choudhary, S.2    Shokeen, B.3    Bhatia, S.4
  • 22
    • 34347349067 scopus 로고    scopus 로고
    • Developmentofanintegrated intraspecific mapofchick-pea (Cicer arietinum L.) using two recombinant inbred line Populations
    • Radhika, P., Gowda, S.J.M., Kadoo, N.Y., et al. 2007, Developmentofanintegrated intraspecific mapofchick-pea (Cicer arietinum L.) using two recombinant inbred line Populations, Theor. Appl. Genet., 115, 209-16.
    • (2007) Theor. Appl. Genet. , vol.115 , pp. 209-216
    • Radhika, P.1    Gowda, S.J.M.2    Kadoo, N.Y.3
  • 23
    • 56549122163 scopus 로고    scopus 로고
    • Genetic structure, diversity, and allelic richness in composite collection and reference setinchickpea(Cicerarie-tinum L.)
    • Upadhyaya, H.D., Dwivedi, S.L., Baum, M., et al. 2008, Genetic structure, diversity, and allelic richness in composite collection and reference setinchickpea(Cicerarie-tinum L.), BMC Plant Biol., 8, 106.
    • (2008) BMC Plant Biol. , vol.8 , pp. 106
    • Upadhyaya, H.D.1    Dwivedi, S.L.2    Baum, M.3
  • 24
    • 58549095442 scopus 로고    scopus 로고
    • Development of chickpea EST-SSR markers and analysis of allelic variation across related species
    • Choudhary, S., Sethy, N.K., Shokeen, B. and Bhatia, S.2009, Development of chickpea EST-SSR markers and analysis of allelic variation across related species, Theor. Appl. Genet., 118, 591-608.
    • (2009) Theor. Appl. Genet. , vol.118 , pp. 591-608
    • Choudhary, S.1    Sethy, N.K.2    Shokeen, B.3    Bhatia, S.4
  • 25
    • 77953129466 scopus 로고    scopus 로고
    • Integration of novel SSRand gene-basedSNP marker lociinthe chick-peageneticmapandestablishmentofnewanchorpoints with Medicago truncatula genome
    • Nayak, S.N., Zhu, H., Varghese, N., et al. 2010, Integration of novel SSRand gene-basedSNP marker lociinthe chick-peageneticmapandestablishmentofnewanchorpoints with Medicago truncatula genome, Theor. Appl. Genet., 120, 1415-41.
    • (2010) Theor. Appl. Genet. , vol.120 , pp. 1415-1441
    • Nayak, S.N.1    Zhu, H.2    Varghese, N.3
  • 26
    • 79951855458 scopus 로고    scopus 로고
    • Mapping QTL for resistance to botrytis grey mould in chickpea
    • Anuradha, C., Gaur, P.M., Pande, S., et al. 2011, Mapping QTL for resistance to botrytis grey mould in chickpea, Euphytica, 182, 1-9.
    • (2011) Euphytica , vol.182 , pp. 1-9
    • Anuradha, C.1    Gaur, P.M.2    Pande, S.3
  • 27
    • 84864092650 scopus 로고    scopus 로고
    • Moleculardiversityandphylogenyingeographicalcollec-tion of chickpea (Cicer sp.) accessions
    • Bharadwaj, C., Srivastava, R., Chauhan, S.K., et al. 2011, Moleculardiversityandphylogenyingeographicalcollec-tion of chickpea (Cicer sp.) accessions, J. Genet., 90, e94-100.
    • (2011) J. Genet. , vol.90 , pp. e94-100
    • Bharadwaj, C.1    Srivastava, R.2    Chauhan, S.K.3
  • 28
    • 79951584055 scopus 로고    scopus 로고
    • Advancing the STMS genomic resources for defining new locations on the intraspecific genetic linkage map of chickpea (Cicer arietinum L)
    • Gaur, R., Sethy, N.K., Choudhary, S., Shokeen, B., Gupta, V. and Bhatia, S. 2011, Advancing the STMS genomic resources for defining new locations on the intraspecific genetic linkage map of chickpea (Cicer arietinum L), BMC Genomics, 12, 117.
    • (2011) BMC Genomics , vol.12 , pp. 117
    • Gaur, R.1    Sethy, N.K.2    Choudhary, S.3    Shokeen, B.4    Gupta, V.5    Bhatia, S.6
  • 29
    • 79959287492 scopus 로고    scopus 로고
    • Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L)
    • Gujaria, N., Kumar, A., Dauthal, P., et al. 2011, Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L), Theor. Appl. Genet, 122, 1577-89.
    • (2011) Theor. Appl. Genet , vol.122 , pp. 1577-1589
    • Gujaria, N.1    Kumar, A.2    Dauthal, P.3
  • 30
    • 80255132032 scopus 로고    scopus 로고
    • Genetic diversity of Iranian accessions, improved lines of chickpea (Cicer arietinum L.) and their wild relatives by using simple sequence repeats
    • Saeed, A., Hovsepyan, H., Darvishzadeh, R., Imtiaz, M., Panguluri, S.K. and Nazaryan, R. 2011, Genetic diversity of Iranian accessions, improved lines of chickpea (Cicer arietinum L.) and their wild relatives by using simple sequence repeats, PlantMol. Biol. Rep., 29, 848-58.
    • (2011) PlantMol. Biol. Rep. , vol.29 , pp. 848-858
    • Saeed, A.1    Hovsepyan, H.2    Darvishzadeh, R.3    Imtiaz, M.4    Panguluri, S.K.5    Nazaryan, R.6
  • 31
    • 84860612585 scopus 로고    scopus 로고
    • Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1, 291 marker loci for chickpea (Cicer arietinum L)
    • Thudi, M., Bohra, A., Nayak, S.N., et al. 2011, Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1, 291 marker loci for chickpea (Cicer arietinum L), PLoSOne, 6, e27275.
    • (2011) PLoSOne , vol.6 , pp. e27275
    • Thudi, M.1    Bohra, A.2    Nayak, S.N.3
  • 32
    • 84930472856 scopus 로고    scopus 로고
    • Genetic structure and diversity analysis of the primary gene pool of chickpea using SSR markers
    • Choudhary, P., Khanna, S.M.Jain, P.K., et al. 2012, Genetic structure and diversity analysis of the primary gene pool of chickpea using SSR markers, Genet. Mol. Res., 11, 891-905.
    • (2012) Genet. Mol. Res. , vol.11 , pp. 891-905
    • Choudhary, P.1    Khanna, S.M.2    Jain, P.K.3
  • 33
    • 84867714759 scopus 로고    scopus 로고
    • High-throughput SNP discovery and genotyping for constructing a saturated linkage map of chickpea (Cicer arietinum L)
    • Gaur, R., Aza, S., Jeena, G., et al. 2012, High-throughput SNP discovery and genotyping for constructing a saturated linkage map of chickpea (Cicer arietinum L), DNA Res., 19, 357-73.
    • (2012) DNA Res. , vol.19 , pp. 357-373
    • Gaur, R.1    Aza, S.2    Jeena, G.3
  • 34
    • 84863564349 scopus 로고    scopus 로고
    • Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes
    • Hiremath, P.J., Kumar, A., Penmetsa, R.V., et al. 2012, Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes, Plant Biotechnol.J., 10, 716-32.
    • (2012) Plant Biotechnol.J. , vol.10 , pp. 716-732
    • Hiremath, P.J.1    Kumar, A.2    Penmetsa, R.V.3
  • 35
    • 84861738658 scopus 로고    scopus 로고
    • Assessment of ICCV 2 xJG 62 chickpea progenies shows sensitivity of reproduction to salt stress and reveals QTL for seed yield and yield components
    • Vadez, V, Krishnamurthy, L, Mahendar, T., et al. 2012, Assessment of ICCV 2 xJG 62 chickpea progenies shows sensitivity of reproduction to salt stress and reveals QTL for seed yield and yield components, Mol. Breed., 30, 9-21.
    • (2012) Mol. Breed. , vol.30 , pp. 9-21
    • Vadez, V.1    Krishnamurthy, L.2    Mahendar, T.3
  • 36
    • 84884190218 scopus 로고    scopus 로고
    • Functionally relevant microsatellite markers from chickpea transcription factor genes for efficient genotyping applications and trait association mapping
    • Kujur, A., Bajaj, D., Saxena, M.S., et al. 2013, Functionally relevant microsatellite markers from chickpea transcription factor genes for efficient genotyping applications and trait association mapping, DNA Res., 20, 355-74.
    • (2013) DNA Res. , vol.20 , pp. 355-374
    • Kujur, A.1    Bajaj, D.2    Saxena, M.S.3
  • 37
    • 84901348264 scopus 로고    scopus 로고
    • An efficient and cost-effective approach for genic microsatellite marker-based large-scale trait association mapping: Identification of candidate genesfor seed weight in chickpea
    • Kujur, A., Bajaj, D., Saxena, M.S., et al. 2014, An efficient and cost-effective approach for genic microsatellite marker-based large-scale trait association mapping: identification of candidate genesfor seed weight in chickpea, Mol. Breed., 34, 241-65.
    • (2014) Mol. Breed. , vol.34 , pp. 241-265
    • Kujur, A.1    Bajaj, D.2    Saxena, M.S.3
  • 38
    • 0030982893 scopus 로고    scopus 로고
    • Construction of a chickpea linkage map and its comparison with maps of pea and lentil
    • Simon, C.J. and Muehlbauer, F.J. 1997, Construction of a chickpea linkage map and its comparison with maps of pea and lentil, J. Hered., 88, 115-9.
    • (1997) J. Hered. , vol.88 , pp. 115-119
    • Simon, C.J.1    Muehlbauer, F.J.2
  • 39
    • 0036954961 scopus 로고    scopus 로고
    • Integration of sequence tagged microsatellite sites to chickpea genetic map
    • Tekeoglu, M., Rajesh, P.N. and Muehlbauer, F.J. 2002, Integration of sequence tagged microsatellite sites to chickpea genetic map, Theor. Appl. Genet., 105, 847-54.
    • (2002) Theor. Appl. Genet. , vol.105 , pp. 847-854
    • Tekeoglu, M.1    Rajesh, P.N.2    Muehlbauer, F.J.3
  • 40
    • 0042203714 scopus 로고    scopus 로고
    • DAF makertightly linked to a major locus for Ascochyta blight resistance in chickpea (Cicer arietinum L)
    • Rakshit, S., Winter, P., Tekeoglu, M., Munoz J.J., Paff, T. and Benko-Iseppon, A.M. 2003, DAF makertightly linked to a major locus for Ascochyta blight resistance in chickpea (Cicer arietinum L), Euphytica, 32, 23-30.
    • (2003) Euphytica , vol.32 , pp. 23-30
    • Rakshit, S.1    Winter, P.2    Tekeoglu, M.3    Munoz, J.J.4    Paff, T.5    Benko-Iseppon, A.M.6
  • 41
    • 22844441534 scopus 로고    scopus 로고
    • Quantitative trait loci governing carotenoid concentration and weight in seeds of chickpea (Cicer arietinum L)
    • Abbo, S., Molina, C, Jungmann, R., et al. 2005, Quantitative trait loci governing carotenoid concentration and weight in seeds of chickpea (Cicer arietinum L), Theor.Appl. Genet., 111, 185-95.
    • (2005) Theor.Appl. Genet. , vol.111 , pp. 185-195
    • Abbo, S.1    Molina, C.2    Jungmann, R.3
  • 42
    • 84878341271 scopus 로고    scopus 로고
    • A draft genome sequence of the pulse crop chickpea (Cicer arietinum L)
    • Jain, M., Misra, G., Patel, R.K., et al. 2013, A draft genome sequence of the pulse crop chickpea (Cicer arietinum L), PlantJ., 74, 715-29.
    • (2013) PlantJ. , vol.74 , pp. 715-729
    • Jain, M.1    Misra, G.2    Patel, R.K.3
  • 43
    • 84875176954 scopus 로고    scopus 로고
    • Draft genome sequence of chickpea (Cicerarietinum) provides a resource for trait improvement
    • Varshney, R.K., Song, C, Saxena, R.K., et al. 2013, Draft genome sequence of chickpea (Cicerarietinum) provides a resource for trait improvement, Nat. Biotechnol., 31, 240-6.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 240-246
    • Varshney, R.K.1    Song, C.2    Saxena, R.K.3
  • 44
    • 84896735595 scopus 로고    scopus 로고
    • The acid phos-phatase-encoding gene GmACP1 contributes to soybean tolerance to low-phosphorus stress
    • Zhang, D., Song, H., Cheng, H., et al. 2014, The acid phos-phatase-encoding gene GmACP1 contributes to soybean tolerance to low-phosphorus stress, PLoS Genetics, 10, e1004061.
    • (2014) PLoS Genetics , vol.10 , pp. e1004061
    • Zhang, D.1    Song, H.2    Cheng, H.3
  • 45
    • 77955302593 scopus 로고    scopus 로고
    • Combining QTL mapping and transcriptome profiling of bulked RILs for identification of functional polymorphism for salt tolerance genes in rice (Oryza sativa L)
    • Pandit, A., Rai, V, Bal, S., et al. 2010, Combining QTL mapping and transcriptome profiling of bulked RILs for identification of functional polymorphism for salt tolerance genes in rice (Oryza sativa L), Mol. Genet. Genomics, 284, 121-36.
    • (2010) Mol. Genet. Genomics , vol.284 , pp. 121-136
    • Pandit, A.1    Rai, V.2    Bal, S.3
  • 46
    • 0037734547 scopus 로고    scopus 로고
    • Estimating and interpreting heritability for plant breeding: An update
    • Holland, J.B., Nyquist, W.E. and Cervantes-Martinez, C.T. 2003, Estimating and interpreting heritability for plant breeding: an update, Plant Breed. Rev., 22, 9-112.
    • (2003) Plant Breed. Rev. , vol.22 , pp. 9-112
    • Holland, J.B.1    Nyquist, W.E.2    Cervantes-Martinez, C.T.3
  • 47
    • 0023426747 scopus 로고
    • MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations
    • Lander, E.S., Green, P., Abrahamson, J., et al. 1987, MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations, Genomics, 1, 174-81.
    • (1987) Genomics , vol.1 , pp. 174-181
    • Lander, E.S.1    Green, P.2    Abrahamson, J.3
  • 49
    • 84857629413 scopus 로고    scopus 로고
    • Department of Statistics, North Carolina State University, Raleigh, NC
    • Wang, S., Basten, C.J. and Zeng, Z.B. 2010, Windows QTL Cartographer 2.5. Department of Statistics, North Carolina State University, Raleigh, NC. http://statgen. ncsu.edu/qticart/WQTLCart.htm.
    • (2010) Windows QTL Cartographer 2.5
    • Wang, S.1    Basten, C.J.2    Zeng, Z.B.3
  • 51
    • 84871643573 scopus 로고    scopus 로고
    • Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers
    • Agarwal, G., Jhanwar, S., Priya, P., et al. 2012, Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers, PLoS One, 7, e52443.
    • (2012) PLoS One , vol.7 , pp. e52443
    • Agarwal, G.1    Jhanwar, S.2    Priya, P.3
  • 52
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M. and Kumar, S. 2007, MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0., Mol. Biol. Evol., 24, 1596-9.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 54
    • 58749090349 scopus 로고    scopus 로고
    • Genetic analysis of agronomic traits in a wide cross of chickpea
    • Cobos, M.J., Winter, P., Kharrat, M., et al. 2009, Genetic analysis of agronomic traits in a wide cross of chickpea, Field Crops Res., 111, 130-6.
    • (2009) Field Crops Res. , vol.111 , pp. 130-136
    • Cobos, M.J.1    Winter, P.2    Kharrat, M.3
  • 55
    • 77954669285 scopus 로고    scopus 로고
    • Inheritance of seed size in chickpea (Cicer arieti-num L.) and identification of QTL based on 100-seed weight and seed size index
    • Hossain, S., Ford, R., McNeil, D., Pittock, C. and Panozzo, J.F. 2010, Inheritance of seed size in chickpea (Cicer arieti-num L.) and identification of QTL based on 100-seed weight and seed size index, Aust. J. Crop. Sci., 4, 126-35.
    • (2010) Aust. J. Crop. Sci. , vol.4 , pp. 126-135
    • Hossain, S.1    Ford, R.2    McNeil, D.3    Pittock, C.4    Panozzo, J.F.5
  • 56
    • 84900445403 scopus 로고    scopus 로고
    • Genetic dissection of drought tolerance in chickpea (Cicerarietinum L)
    • Varshney, R.K., Thudi, M., Nayak, S.N., et al. 2014, Genetic dissection of drought tolerance in chickpea (Cicerarietinum L), Theor.Appl. Genet, 127, 445-62.
    • (2014) Theor.Appl. Genet , vol.127 , pp. 445-462
    • Varshney, R.K.1    Thudi, M.2    Nayak, S.N.3
  • 58
    • 84898058782 scopus 로고    scopus 로고
    • Integrated physical, genetic and genome map of chickpea (Cicerarietinum L.)
    • Varshney, R.K., Mir, R.R., Bhatia, S., et al. 2014, Integrated physical, genetic and genome map of chickpea (Cicerarietinum L.), Funct. Integr. Genomics, 14, 59-73.
    • (2014) Funct. Integr. Genomics , vol.14 , pp. 59-73
    • Varshney, R.K.1    Mir, R.R.2    Bhatia, S.3
  • 59
    • 77649286745 scopus 로고    scopus 로고
    • Polymorphisms in monolignol biosynthetic genes are associated with biomass yield and agronomic traits in European maize (Zea mays L.)
    • Chen, Y., Zein, I., Brenner, EA., et al. 2010, Polymorphisms in monolignol biosynthetic genes are associated with biomass yield and agronomic traits in European maize (Zea mays L.), BMC Plant Biol., 10, 12-22.
    • (2010) BMC Plant Biol. , vol.10 , pp. 12-22
    • Chen, Y.1    Zein, I.2    Brenner, E.A.3
  • 60
    • 80053388300 scopus 로고    scopus 로고
    • Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa
    • Zhao, K., Tung, C.W., Eizenga, G.C., et al. 2011, Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa, Nat. Commun., 2, 467.
    • (2011) Nat. Commun. , vol.2 , pp. 467
    • Zhao, K.1    Tung, C.W.2    Eizenga, G.C.3
  • 61
    • 79957887475 scopus 로고    scopus 로고
    • Towards marker-assisted selection in pulses: A review
    • Kumar, J., Choudhary, A.K., Solanki, R.K. and Pratap, A. 2011, Towards marker-assisted selection in pulses: a review, Plant Breed., 130, 297-313.
    • (2011) Plant Breed. , vol.130 , pp. 297-313
    • Kumar, J.1    Choudhary, A.K.2    Solanki, R.K.3    Pratap, A.4
  • 62
    • 0036444884 scopus 로고    scopus 로고
    • Mapping genes for double podding and other morphological traits in chickpea
    • Cho, S., Kumar, J., Shultz, J.F., Anupama, K., Tefera, F. and Muehlbauer, F.J. 2002, Mapping genes for double podding and other morphological traits in chickpea, Euphytica, 125, 285-92.
    • (2002) Euphytica , vol.125 , pp. 285-292
    • Cho, S.1    Kumar, J.2    Shultz, J.F.3    Anupama, K.4    Tefera, F.5    Muehlbauer, F.J.6
  • 63
    • 84900397393 scopus 로고    scopus 로고
    • Genetic dissection of drought and heat tolerance in chickpea through genome-wide and candidate gene-based association mapping approaches
    • Thudi, M., Upadhyaya, H.D., Rathore, A., et al. 2014, Genetic dissection of drought and heat tolerance in chickpea through genome-wide and candidate gene-based association mapping approaches, PLoS One, 9, e96758.
    • (2014) PLoS One , vol.9 , pp. e96758
    • Thudi, M.1    Upadhyaya, H.D.2    Rathore, A.3
  • 64
    • 0035289981 scopus 로고    scopus 로고
    • Functionandevolutionof the plant MADS-box gene family
    • Ng, M. and Yanofsky, M.F.2001, Functionandevolutionof the plant MADS-box gene family, Nat. Rev. Genet., 2, 186-95.
    • (2001) Nat. Rev. Genet. , vol.2 , pp. 186-195
    • Ng, M.1    Yanofsky, M.F.2
  • 65
    • 0035999460 scopus 로고    scopus 로고
    • Genetics of Aux/IAA and ARF action in plant growth and development
    • Liscum, E. and Reed, J.W. 2002, Genetics of Aux/IAA and ARF action in plant growth and development, Plant Mol. Biol., 49, 387-400.
    • (2002) Plant Mol. Biol. , vol.49 , pp. 387-400
    • Liscum, E.1    Reed, J.W.2
  • 66
    • 1942501774 scopus 로고    scopus 로고
    • The GATA family of transcription factors in Arabidopsis and rice
    • Reyes, J.C., Muro-Pastor, M.I. and Florencio, F.J. 2004, The GATA family of transcription factors in Arabidopsis and rice, Plant Physiol., 134, 1718-32.
    • (2004) Plant Physiol. , vol.134 , pp. 1718-1732
    • Reyes, J.C.1    Muro-Pastor, M.I.2    Florencio, F.J.3
  • 67
    • 13744249762 scopus 로고    scopus 로고
    • NAC transcription factors: Structurally distinct, functionally Diverse
    • Olsen, A.N., Ernst, H.A., Leggio, L.L. and Skriver, K. 2005, NAC transcription factors: structurally distinct, functionally Diverse, Trends Plant Sci., 10, 79-87.
    • (2005) Trends Plant Sci. , vol.10 , pp. 79-87
    • Olsen, A.N.1    Ernst, H.A.2    Leggio, L.L.3    Skriver, K.4
  • 69
    • 79951538074 scopus 로고    scopus 로고
    • Transcription factors regulating the progression of monocot and dicot seed development
    • Agarwal, P., Kapoor, S. and Tyagi, A.K. 2011, Transcription factors regulating the progression of monocot and dicot seed development, Bioessays, 33, 189-202.
    • (2011) Bioessays , vol.33 , pp. 189-202
    • Agarwal, P.1    Kapoor, S.2    Tyagi, A.K.3
  • 71
    • 0036714148 scopus 로고    scopus 로고
    • Shoot meristem maintenance is controlled by a GRAS-gene mediated signal from differentiating cells
    • Stuurman, J., Jaggi, F. and Kuhlemeier, C. 2002, Shoot meristem maintenance is controlled by a GRAS-gene mediated signal from differentiating cells, Genes Dev., 16, 2213-8.
    • (2002) Genes Dev. , vol.16 , pp. 2213-2218
    • Stuurman, J.1    Jaggi, F.2    Kuhlemeier, C.3
  • 72
    • 79551706044 scopus 로고    scopus 로고
    • Arabidopsis homologs of the Petunia hairy meristem gene are required for maintenance of shoot and root indeterminacy
    • Engstrom, E.M., And ersen, C.M., Gumulak-Smith, J., et al. 2011, Arabidopsis homologs of the Petunia hairy meristem gene are required for maintenance of shoot and root indeterminacy, Plant Physiol., 155, 735-50.
    • (2011) Plant Physiol. , vol.155 , pp. 735-750
    • Engstrom, E.M.1    Andersen, C.M.2    Gumulak-Smith, J.3
  • 73
    • 33646494164 scopus 로고    scopus 로고
    • Biotechnology approachesto overcome biotic and abiotic stress constraints in legumes
    • Dita, M.A., Rispail, N., Prats, E., Rubiales, D. and Singh, K.B. 2006, Biotechnology approachesto overcome biotic and abiotic stress constraints in legumes, Euphytica, 147, 1-24.
    • (2006) Euphytica , vol.147 , pp. 1-24
    • Dita, M.A.1    Rispail, N.2    Prats, E.3    Rubiales, D.4    Singh, K.B.5
  • 74
    • 84880834673 scopus 로고    scopus 로고
    • The corresponding relationship between roles of NADP-malic enzymes and abiotic stress in plants
    • Zeng-Hui, L., Zheng-Bin, Z., Li-Ye, C. and Hong-Bo, S.2010, The corresponding relationship between roles of NADP-malic enzymes and abiotic stress in plants, Emir. J. Food Agric., 22, 239-49.
    • (2010) Emir. J. Food Agric. , vol.22 , pp. 239-249
    • Zeng-Hui, L.1    Zheng-Bin, Z.2    Li-Ye, C.3    Hong-Bo, S.4
  • 75
    • 38949124519 scopus 로고    scopus 로고
    • Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice
    • Nijhawan, A., Jain, M., Tyagi, A.K. and Khurana, J.P. 2008, Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice, Plant Physiol., 146, 333-50.
    • (2008) Plant Physiol. , vol.146 , pp. 333-350
    • Nijhawan, A.1    Jain, M.2    Tyagi, A.K.3    Khurana, J.P.4
  • 76
    • 84885721311 scopus 로고    scopus 로고
    • A cytochrome P450 regulates a domestication traitin cultivated tomato
    • Chakrabarti, M., Zhang, N., Sauvage, C., et al. 2013, A cytochrome P450 regulates a domestication traitin cultivated tomato, Proc. Natl Acad. Sci. USA, 110, 17125-30.
    • (2013) Proc. Natl Acad. Sci. USA , vol.110 , pp. 17125-17130
    • Chakrabarti, M.1    Zhang, N.2    Sauvage, C.3
  • 77
    • 84878434433 scopus 로고    scopus 로고
    • Cytochrome P450 CYP78A9 is involved in Arabidopsis reproductive development
    • Sotelo-Silveira, M., Cucinotta, M., Chauvin, A.L., et al. 2013, Cytochrome P450 CYP78A9 is involved in Arabidopsis reproductive development, Plant Physiol., 162, 779-99.
    • (2013) Plant Physiol. , vol.162 , pp. 779-799
    • Sotelo-Silveira, M.1    Cucinotta, M.2    Chauvin, A.L.3
  • 78
    • 84891912590 scopus 로고    scopus 로고
    • Control of rice embryo development, shoot apical meristem maintenance, and grain yield by a novel cytochrome P450
    • Yang, W., Gao, M., Yin, X., et al. 2013, Control of rice embryo development, shoot apical meristem maintenance, and grain yield by a novel cytochrome P450, Mol. Plant., 6, 1945-60.
    • (2013) Mol. Plant. , vol.6 , pp. 1945-1960
    • Yang, W.1    Gao, M.2    Yin, X.3
  • 79
    • 78650601870 scopus 로고    scopus 로고
    • Linking differential domain functions of the GS3 protein to natural variation of grain size in rice
    • Mao, H., Sun, S., Yao, J., et al. 2010, Linking differential domain functions of the GS3 protein to natural variation of grain size in rice, Proc. Natl Acad. Sci. USA, 107, 19579-84.
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 19579-19584
    • Mao, H.1    Sun, S.2    Yao, J.3
  • 80
    • 84865299428 scopus 로고    scopus 로고
    • SNPs in stress-responsive rice genes: Validation, genotyping, functional relevance and population structure
    • Parida, S.K., Mukerji, M., Singh, A.K., Singh, N.K. and Mohapatra, T. 2012, SNPs in stress-responsive rice genes: validation, genotyping, functional relevance and population structure, BMC Genomics, 13, 426.
    • (2012) BMC Genomics , vol.13 , pp. 426
    • Parida, S.K.1    Mukerji, M.2    Singh, A.K.3    Singh, N.K.4    Mohapatra, T.5
  • 81
    • 33750038248 scopus 로고    scopus 로고
    • Nucleotide diversity in starch synthase IIa and validation of single nucleotide polymorphisms in relation to starch gelatinization temperature and other physicochemical properties in rice (Oryza sativa L.)
    • Bao, J.S., Corke, H. and Sun, M. 2006, Nucleotide diversity in starch synthase IIa and validation of single nucleotide polymorphisms in relation to starch gelatinization temperature and other physicochemical properties in rice (Oryza sativa L.), Theor. Appl. Genet., 113, 1171-83.
    • (2006) Theor. Appl. Genet. , vol.113 , pp. 1171-1183
    • Bao, J.S.1    Corke, H.2    Sun, M.3
  • 82
    • 33744830059 scopus 로고    scopus 로고
    • An SNP caused loss of seed shattering during rice domestication
    • Konishi, S., Izawa, T., Lin, S.Y., et al. 2006, An SNP caused loss of seed shattering during rice domestication, Science, 312, 1392-6.
    • (2006) Science , vol.312 , pp. 1392-1396
    • Konishi, S.1    Izawa, T.2    Lin, S.Y.3
  • 83
    • 84888159043 scopus 로고    scopus 로고
    • Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth
    • Li, S., Li, W., Huang, B., et al. 2013, Natural variation in PTB1 regulates rice seed setting rate by controlling pollen tube growth, Nat. Comm., 4, 2793.
    • (2013) Nat. Comm. , vol.4 , pp. 2793
    • Li, S.1    Li, W.2    Huang, B.3
  • 84
    • 78650621671 scopus 로고    scopus 로고
    • Joint linkage-linkage disequilibrium mapping is a powerful approach to detecting quantitative trait loci underlying drought tolerance in maize
    • Lu, Y., Zhang, S., Shah, T., et al. 2010, Joint linkage-linkage disequilibrium mapping is a powerful approach to detecting quantitative trait loci underlying drought tolerance in maize, Proc. Natl Acad. Sci. USA, 107, 19585-90.
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 19585-19590
    • Lu, Y.1    Zhang, S.2    Shah, T.3
  • 85
    • 80052334114 scopus 로고    scopus 로고
    • Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping
    • Famoso, A.N., Zhao, K., Clark, R.T., et al. 2011, Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping, PLoS Genet., 7, e1002221.
    • (2011) PLoS Genet. , vol.7 , pp. e1002221
    • Famoso, A.N.1    Zhao, K.2    Clark, R.T.3
  • 86
    • 79953176703 scopus 로고    scopus 로고
    • A major QTL, Ghd8, plays pleiotropic roles in regulating grain productivity, plant height, and heading date in rice
    • Yan, W.H., Wang, P., Chen, H.X., et al. 2011, A major QTL, Ghd8, plays pleiotropic roles in regulating grain productivity, plant height, and heading date in rice, Mol. Plant, 4, 319-30.
    • (2011) Mol. Plant , vol.4 , pp. 319-330
    • Yan, W.H.1    Wang, P.2    Chen, H.X.3
  • 87
    • 70849092086 scopus 로고    scopus 로고
    • Global identification of targets of the Arabidopsis MADS domain protein AGAMOUS-Like15
    • Zheng, Y., Ren, N., Wang, H., Stromberg, A.J. and Perry, S.E. 2009, Global identification of targets of the Arabidopsis MADS domain protein AGAMOUS-Like15, Plant Cell, 21, 2563-77.
    • (2009) Plant Cell , vol.21 , pp. 2563-2577
    • Zheng, Y.1    Ren, N.2    Wang, H.3    Stromberg, A.J.4    Perry, S.E.5
  • 88
    • 77952382638 scopus 로고    scopus 로고
    • Globalanalysis of gene activity during Arabidopsis seed development and identification of seed-specific transcription factors
    • Le, B.H., Cheng, C., Bui, A.Q., et al. 2010, Globalanalysis of gene activity during Arabidopsis seed development and identification of seed-specific transcription factors, Proc. Natl Acad. Sci. USA, 107, 8063-70.
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 8063-8070
    • Le, B.H.1    Cheng, C.2    Bui, A.Q.3
  • 89
    • 84857146382 scopus 로고    scopus 로고
    • Genome-wide analysis of the complex transcriptional networks of rice developing seeds
    • Xue, L.J., Zhang, J.J. and Xue, H.W. 2012, Genome-wide analysis of the complex transcriptional networks of rice developing seeds, PLoS One, 7, e31081.
    • (2012) PLoS One , vol.7 , pp. e31081
    • Xue, L.J.1    Zhang, J.J.2    Xue, H.W.3


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