메뉴 건너뛰기




Volumn 24, Issue 2, 2015, Pages 397-409

Systematic annotation of celiac disease loci refines pathological pathways and suggests a genetic explanation for increased interferon-gamma levels

Author keywords

[No Author keywords available]

Indexed keywords

GAMMA INTERFERON;

EID: 84922419326     PISSN: 09646906     EISSN: 14602083     Source Type: Journal    
DOI: 10.1093/hmg/ddu453     Document Type: Article
Times cited : (59)

References (48)
  • 1
    • 84873761510 scopus 로고
    • Coeliac disease. II. The presence in wheat of a factor having a deleterious effect in cases of coeliac disease
    • Dicke, W.K., Weijers, H.A. and Van De Kamer, J.H. (1953) Coeliac disease. II. The presence in wheat of a factor having a deleterious effect in cases of coeliac disease. Acta Paediatr., 42, 34-42.
    • (1953) Acta Paediatr. , vol.42 , pp. 34-42
    • Dicke, W.K.1    Weijers, H.A.2    Van De Kamer, J.H.3
  • 2
    • 79954580244 scopus 로고    scopus 로고
    • Nutritional and dietary aspects of celiac disease
    • Garcia-Manzanares, A. and Lucendo, A.J. (2011) Nutritional and dietary aspects of celiac disease. Nutr. Clin. Pract., 26, 163-173.
    • (2011) Nutr. Clin. Pract. , vol.26 , pp. 163-173
    • Garcia-Manzanares, A.1    Lucendo, A.J.2
  • 3
    • 84879607614 scopus 로고    scopus 로고
    • Compromised quality of life in patients with both type 1 diabetes mellitus and coeliac disease
    • Bakker, S.F., Pouwer, F., Tushuizen, M.E., Hoogma, R.P., Mulder, C.J. and Simsek, S. (2013) Compromised quality of life in patients with both type 1 diabetes mellitus and coeliac disease. Diabet. Med., 30, 835-839.
    • (2013) Diabet. Med. , vol.30 , pp. 835-839
    • Bakker, S.F.1    Pouwer, F.2    Tushuizen, M.E.3    Hoogma, R.P.4    Mulder, C.J.5    Simsek, S.6
  • 10
    • 0036208832 scopus 로고    scopus 로고
    • Patterns of linkage disequilibrium in the human genome
    • Ardlie, K.G., Kruglyak, L. and Seielstad, M. (2002) Patterns of linkage disequilibrium in the human genome. Nat. Rev. Genet., 3, 299-309.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 299-309
    • Ardlie, K.G.1    Kruglyak, L.2    Seielstad, M.3
  • 12
    • 84866091800 scopus 로고    scopus 로고
    • From genome-wide association studies to disease mechanisms: celiac disease as a model for autoimmune diseases
    • Kumar, V., Wijmenga, C. and Withoff, S. (2012) From genome-wide association studies to disease mechanisms: celiac disease as a model for autoimmune diseases. Semin. Immunopathol., 34, 567-580.
    • (2012) Semin. Immunopathol. , vol.34 , pp. 567-580
    • Kumar, V.1    Wijmenga, C.2    Withoff, S.3
  • 15
    • 70349629971 scopus 로고    scopus 로고
    • Using biological networks to search for interacting loci in genome-wide association studies
    • Emily, M., Mailund, T., Hein, J., Schauser, L. and Schierup, M.H. (2009) Using biological networks to search for interacting loci in genome-wide association studies. Eur. J. Hum. Genet., 17, 1231-1240.
    • (2009) Eur. J. Hum. Genet. , vol.17 , pp. 1231-1240
    • Emily, M.1    Mailund, T.2    Hein, J.3    Schauser, L.4    Schierup, M.H.5
  • 18
    • 58849112975 scopus 로고    scopus 로고
    • Pathways-based analyses of whole-genome association study data in bipolar disorder reveal genes mediating ion channel activity and synaptic neurotransmission
    • Askland, K., Read, C. and Moore, J. (2009) Pathways-based analyses of whole-genome association study data in bipolar disorder reveal genes mediating ion channel activity and synaptic neurotransmission. Hum. Genet., 125, 63-79.
    • (2009) Hum. Genet. , vol.125 , pp. 63-79
    • Askland, K.1    Read, C.2    Moore, J.3
  • 22
    • 8444221894 scopus 로고    scopus 로고
    • The interferon gamma gene in celiac disease: augmented expression correlates with tissue damage but no evidence for genetic susceptibility
    • Wapenaar, M.C., van Belzen, M.J., Fransen, J.H., Sarasqueta, A.F., Houwen, R.H., Meijer, J.W., Mulder, C.J. and Wijmenga, C. (2004) The interferon gamma gene in celiac disease: augmented expression correlates with tissue damage but no evidence for genetic susceptibility. J. Autoimmun., 23, 183-190.
    • (2004) J. Autoimmun. , vol.23 , pp. 183-190
    • Wapenaar, M.C.1    van Belzen, M.J.2    Fransen, J.H.3    Sarasqueta, A.F.4    Houwen, R.H.5    Meijer, J.W.6    Mulder, C.J.7    Wijmenga, C.8
  • 23
    • 84865777825 scopus 로고    scopus 로고
    • Linking disease associations with regulatory information in the human genome
    • Schaub, M.A., Boyle, A.P., Kundaje, A., Batzoglou, S. and Snyder, M. (2012) Linking disease associations with regulatory information in the human genome. Genome Res., 22, 1748-1759.
    • (2012) Genome Res. , vol.22 , pp. 1748-1759
    • Schaub, M.A.1    Boyle, A.P.2    Kundaje, A.3    Batzoglou, S.4    Snyder, M.5
  • 25
    • 84858779229 scopus 로고    scopus 로고
    • HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants
    • Ward, L.D. and Kellis, M. (2012) HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants. Nucleic Acids Res., 40, D930-D934.
    • (2012) Nucleic Acids Res. , vol.40 , pp. D930-D934
    • Ward, L.D.1    Kellis, M.2
  • 26
    • 84862782326 scopus 로고    scopus 로고
    • High abundance of plasma cells secreting transglutaminase 2-specific IgA autoantibodies with limited somatic hypermutation in celiac disease intestinal lesions
    • Di Niro, R., Mesin, L., Zheng, N.Y., Stamnaes, J., Morrissey, M., Lee, J.H., Huang, M., Iversen, R., du Pre, M.F., Qiao, S.W. et al. (2012) High abundance of plasma cells secreting transglutaminase 2-specific IgA autoantibodies with limited somatic hypermutation in celiac disease intestinal lesions. Nat. Med., 18, 441-445.
    • (2012) Nat. Med. , vol.18 , pp. 441-445
    • Di Niro, R.1    Mesin, L.2    Zheng, N.Y.3    Stamnaes, J.4    Morrissey, M.5    Lee, J.H.6    Huang, M.7    Iversen, R.8    du Pre, M.F.9    Qiao, S.W.10
  • 27
    • 84867901679 scopus 로고    scopus 로고
    • An integrative computational systems biology approach identifies differentially regulated dynamic transcriptome signatures which drive the initiation of human T helper cell differentiation
    • Aijo, T., Edelman, S.M., Lonnberg, T., Larjo, A., Kallionpaa, H., Tuomela, S., Engstrom, E., Lahesmaa, R. and Lahdesmaki, H. (2012) An integrative computational systems biology approach identifies differentially regulated dynamic transcriptome signatures which drive the initiation of human T helper cell differentiation. BMC Genomics, 13, 572.
    • (2012) BMC Genomics , vol.13 , pp. 572
    • Aijo, T.1    Edelman, S.M.2    Lonnberg, T.3    Larjo, A.4    Kallionpaa, H.5    Tuomela, S.6    Engstrom, E.7    Lahesmaa, R.8    Lahdesmaki, H.9
  • 36
    • 84862983605 scopus 로고    scopus 로고
    • Celiac disease: an immunological jigsaw
    • Meresse, B., Malamut, G. and Cerf-Bensussan, N. (2012) Celiac disease: an immunological jigsaw. Immunity, 36, 907-919.
    • (2012) Immunity , vol.36 , pp. 907-919
    • Meresse, B.1    Malamut, G.2    Cerf-Bensussan, N.3
  • 37
    • 84879604583 scopus 로고    scopus 로고
    • Global chromatin state analysis reveals lineage-specific enhancers during the initiation of human Thelper 1 and Thelper 2 cell polarization
    • Hawkins, R.D., Larjo, A., Tripathi, S.K., Wagner, U., Luu, Y., Lonnberg, T., Raghav, S.K., Lee, L.K., Lund, R., Ren, B. et al. (2013) Global chromatin state analysis reveals lineage-specific enhancers during the initiation of human Thelper 1 and Thelper 2 cell polarization. Immunity, 38, 1271-1284.
    • (2013) Immunity , vol.38 , pp. 1271-1284
    • Hawkins, R.D.1    Larjo, A.2    Tripathi, S.K.3    Wagner, U.4    Luu, Y.5    Lonnberg, T.6    Raghav, S.K.7    Lee, L.K.8    Lund, R.9    Ren, B.10
  • 41
    • 79851502150 scopus 로고    scopus 로고
    • Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology
    • Rossin, E.J., Lage, K., Raychaudhuri, S., Xavier, R.J., Tatar, D., Benita, Y., Cotsapas, C. and Daly, M.J. (2011) Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology. PLoS Genet., 7, e1001273.
    • (2011) PLoS Genet. , vol.7 , pp. e1001273
    • Rossin, E.J.1    Lage, K.2    Raychaudhuri, S.3    Xavier, R.J.4    Tatar, D.5    Benita, Y.6    Cotsapas, C.7    Daly, M.J.8
  • 42
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang da, W., Sherman, B.T. and Lempicki, R.A. (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc., 4, 44-57.
    • (2009) Nat. Protoc. , vol.4 , pp. 44-57
    • Huang da, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 43
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
    • Huang da, W., Sherman, B.T. and Lempicki, R.A. (2009) Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res., 37, 1-13.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1-13
    • Huang da, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 45
    • 33751384465 scopus 로고    scopus 로고
    • GATHER: a systems approach to interpreting genomic signatures
    • Chang, J.T. and Nevins, J.R. (2006) GATHER: a systems approach to interpreting genomic signatures. Bioinformatics, 22, 2926-2933.
    • (2006) Bioinformatics , vol.22 , pp. 2926-2933
    • Chang, J.T.1    Nevins, J.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.