메뉴 건너뛰기




Volumn 128, Issue 1, 2015, Pages 187-199

Circadian expression profiles of chromatin remodeling factor genes in Arabidopsis

Author keywords

Arabidopsis; Chromatin remodeling; Circadian clock; DNA methylation; Histone modification

Indexed keywords

ARABIDOPSIS;

EID: 84921422988     PISSN: 09189440     EISSN: 16180860     Source Type: Journal    
DOI: 10.1007/s10265-014-0665-8     Document Type: Article
Times cited : (15)

References (87)
  • 1
    • 33746807366 scopus 로고    scopus 로고
    • Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation
    • COI: 1:CAS:528:DC%2BD28XotFansrk%3D, PID: 16864782
    • Agius F, Kapoor A, Zhu JK (2006) Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation. Proc Natl Acad Sci USA 103:11796–11801
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 11796-11801
    • Agius, F.1    Kapoor, A.2    Zhu, J.K.3
  • 2
    • 0035800467 scopus 로고    scopus 로고
    • Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock
    • PID: 11486091
    • Alabadí D, Oyama T, Yanovsky MJ, Harmon FG, Más P, Kay SA (2001) Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock. Science 293:880–883
    • (2001) Science , vol.293 , pp. 880-883
    • Alabadí, D.1    Oyama, T.2    Yanovsky, M.J.3    Harmon, F.G.4    Más, P.5    Kay, S.A.6
  • 5
    • 0037881838 scopus 로고    scopus 로고
    • Chromatin dynamics and Arabidopsis development
    • COI: 1:CAS:528:DC%2BD3sXit1Chsro%3D, PID: 12769294
    • Berger F, Gaudin V (2003) Chromatin dynamics and Arabidopsis development. Chromosome Res 11:277–304
    • (2003) Chromosome Res , vol.11 , pp. 277-304
    • Berger, F.1    Gaudin, V.2
  • 7
    • 0035983764 scopus 로고    scopus 로고
    • MYB transcription factors in the Arabidopsis circadian clock
    • PID: 12096093
    • Carré IA, Kim JY (2002) MYB transcription factors in the Arabidopsis circadian clock. J Exp Bot 53:1551–1557
    • (2002) J Exp Bot , vol.53 , pp. 1551-1557
    • Carré, I.A.1    Kim, J.Y.2
  • 8
    • 67349190247 scopus 로고    scopus 로고
    • Linking DNA methylation and histone modification: patterns and paradigms
    • COI: 1:CAS:528:DC%2BD1MXksF2rsL0%3D, PID: 19308066
    • Cedar H, Bergman Y (2009) Linking DNA methylation and histone modification: patterns and paradigms. Nat Rev Genet 10:295–304
    • (2009) Nat Rev Genet , vol.10 , pp. 295-304
    • Cedar, H.1    Bergman, Y.2
  • 9
    • 0035782666 scopus 로고    scopus 로고
    • Maternal control of seed development
    • COI: 1:CAS:528:DC%2BD3MXmsFSjs7c%3D, PID: 11535046
    • Chaudhury AM, Berger F (2001) Maternal control of seed development. Semin Cell Dev Biol 12:381–386
    • (2001) Semin Cell Dev Biol , vol.12 , pp. 381-386
    • Chaudhury, A.M.1    Berger, F.2
  • 10
    • 34249787308 scopus 로고    scopus 로고
    • Roles of dynamic and reversible histone acetylation in plant development and polyploidy
    • COI: 1:CAS:528:DC%2BD2sXmtlSnsLg%3D, PID: 17556080
    • Chen ZJ, Tian L (2007) Roles of dynamic and reversible histone acetylation in plant development and polyploidy. Biochim Biophys Acta 1769:295–307
    • (2007) Biochim Biophys Acta , vol.1769 , pp. 295-307
    • Chen, Z.J.1    Tian, L.2
  • 11
    • 79961209798 scopus 로고    scopus 로고
    • Epigenetic gene regulation by plant Jumonji group of histone demethylase
    • COI: 1:CAS:528:DC%2BC3MXhtVaisLbM, PID: 21419882
    • Chen X, Hu Y, Zhou DX (2011) Epigenetic gene regulation by plant Jumonji group of histone demethylase. Biochim Biophys Acta 1809:421–426
    • (2011) Biochim Biophys Acta , vol.1809 , pp. 421-426
    • Chen, X.1    Hu, Y.2    Zhou, D.X.3
  • 12
    • 62349111195 scopus 로고    scopus 로고
    • Epigenetic regulation of stress responses in plants
    • COI: 1:CAS:528:DC%2BD1MXjsVOgtbw%3D, PID: 19179104
    • Chinnusamy V, Zhu JK (2009) Epigenetic regulation of stress responses in plants. Curr Opin Plant Biol 12:133–139
    • (2009) Curr Opin Plant Biol , vol.12 , pp. 133-139
    • Chinnusamy, V.1    Zhu, J.K.2
  • 13
    • 84860908662 scopus 로고    scopus 로고
    • ELF3 recruitment to the PRR9 promoter requires other evening complex members in the Arabidopsis circadian clock
    • COI: 1:CAS:528:DC%2BC38XhtF2isLzE, PID: 22307044
    • Chow BY, Helfer A, Nusinow DA, Kay SA (2012) ELF3 recruitment to the PRR9 promoter requires other evening complex members in the Arabidopsis circadian clock. Plant Signal Behav 7:170–173
    • (2012) Plant Signal Behav , vol.7 , pp. 170-173
    • Chow, B.Y.1    Helfer, A.2    Nusinow, D.A.3    Kay, S.A.4
  • 14
    • 51749110466 scopus 로고    scopus 로고
    • Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development
    • PID: 18710561
    • Covington MF, Maloof JN, Straume M, Kay SA, Harmer SL (2008) Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development. Genome Biol 9:R130
    • (2008) Genome Biol , vol.9 , pp. R130
    • Covington, M.F.1    Maloof, J.N.2    Straume, M.3    Kay, S.A.4    Harmer, S.L.5
  • 15
    • 22744451756 scopus 로고    scopus 로고
    • Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantage
    • COI: 1:CAS:528:DC%2BD2MXmsFChtrw%3D, PID: 16040710
    • Dodd AN, Salathia N, Hall A, Kévei E, Tóth R, Nagy F, Hibberd JM, Millar AJ, Webb AA (2005) Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantage. Science 309:630–633
    • (2005) Science , vol.309 , pp. 630-633
    • Dodd, A.N.1    Salathia, N.2    Hall, A.3    Kévei, E.4    Tóth, R.5    Nagy, F.6    Hibberd, J.M.7    Millar, A.J.8    Webb, A.A.9
  • 17
    • 35848955414 scopus 로고    scopus 로고
    • In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation
    • COI: 1:CAS:528:DC%2BD2sXhsVeitLzK, PID: 17877703
    • Earley KW, Shook MS, Brower-Toland B, Hicks L, Pikaard CS (2007) In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation. Plant J 52:615–626
    • (2007) Plant J , vol.52 , pp. 615-626
    • Earley, K.W.1    Shook, M.S.2    Brower-Toland, B.3    Hicks, L.4    Pikaard, C.S.5
  • 18
    • 79955007772 scopus 로고    scopus 로고
    • Functional implication of the MYB transcription factor RVE8/LCL5 in the circadian control of histone acetylation
    • COI: 1:CAS:528:DC%2BC3MXlvFKktLk%3D, PID: 21205033
    • Farinas B, Mas P (2011) Functional implication of the MYB transcription factor RVE8/LCL5 in the circadian control of histone acetylation. Plant J 66:318–329
    • (2011) Plant J , vol.66 , pp. 318-329
    • Farinas, B.1    Mas, P.2
  • 19
    • 84863089087 scopus 로고    scopus 로고
    • Unproductive alternative splicing and nonsense mRNAs: a widespread phenomenon among plant circadian clock genes
    • COI: 1:CAS:528:DC%2BC38Xht1amsrjI, PID: 22747664
    • Filichkin SA, Mockler TC (2012) Unproductive alternative splicing and nonsense mRNAs: a widespread phenomenon among plant circadian clock genes. Biol Direct 7:20
    • (2012) Biol Direct , vol.7 , pp. 20
    • Filichkin, S.A.1    Mockler, T.C.2
  • 21
    • 84884695040 scopus 로고    scopus 로고
    • Arabidopsis histone methylase CAU1/PRMT5/SKB1 acts as an epigenetic suppressor of the calcium signaling gene CAS to mediate stomatal closure in response to extracellular calcium
    • COI: 1:CAS:528:DC%2BC3sXhs1eht73O, PID: 23943859
    • Fu YL, Zhang GB, Lv XF, Guan Y, Yi HY, Gong JM (2013) Arabidopsis histone methylase CAU1/PRMT5/SKB1 acts as an epigenetic suppressor of the calcium signaling gene CAS to mediate stomatal closure in response to extracellular calcium. Plant Cell 25:2878–2891
    • (2013) Plant Cell , vol.25 , pp. 2878-2891
    • Fu, Y.L.1    Zhang, G.B.2    Lv, X.F.3    Guan, Y.4    Yi, H.Y.5    Gong, J.M.6
  • 23
    • 79955098368 scopus 로고    scopus 로고
    • Methylation and demethylation of the Arabidopsis genome
    • COI: 1:CAS:528:DC%2BC3MXltFyrsb4%3D, PID: 21159546
    • Furner IJ, Matzke M (2011) Methylation and demethylation of the Arabidopsis genome. Curr Opin Plant Biol 14:137–141
    • (2011) Curr Opin Plant Biol , vol.14 , pp. 137-141
    • Furner, I.J.1    Matzke, M.2
  • 24
    • 84866149255 scopus 로고    scopus 로고
    • Comparative analysis of SWIRM domain-containing proteins in plants
    • PID: 22924025
    • Gao Y, Yang S, Yuan L, Cui Y, Wu K (2012) Comparative analysis of SWIRM domain-containing proteins in plants. Comp Funct Genomics 2012:310402
    • (2012) Comp Funct Genomics , vol.2012 , pp. 310402
    • Gao, Y.1    Yang, S.2    Yuan, L.3    Cui, Y.4    Wu, K.5
  • 25
    • 56149107350 scopus 로고    scopus 로고
    • Chromatin remodeling, metabolism and circadian clocks: the interplay of CLOCK and SIRT1
    • COI: 1:CAS:528:DC%2BD1cXhsVWnu73L, PID: 18817890
    • Grimaldi B, Nakahata Y, Kaluzova M, Masubuchi S, Sassone-Corsi P (2009) Chromatin remodeling, metabolism and circadian clocks: the interplay of CLOCK and SIRT1. Int J Biochem Cell Biol 41:81–86
    • (2009) Int J Biochem Cell Biol , vol.41 , pp. 81-86
    • Grimaldi, B.1    Nakahata, Y.2    Kaluzova, M.3    Masubuchi, S.4    Sassone-Corsi, P.5
  • 26
    • 84886953405 scopus 로고    scopus 로고
    • Photosynthetic entrainment of the Arabidopsis thaliana circadian clock
    • COI: 1:CAS:528:DC%2BC3sXhs12lt77I, PID: 24153186
    • Haydon MJ, Mielczarek O, Robertson FC, Hubbard KE, Webb AA (2013) Photosynthetic entrainment of the Arabidopsisthaliana circadian clock. Nature 502:689–692
    • (2013) Nature , vol.502 , pp. 689-692
    • Haydon, M.J.1    Mielczarek, O.2    Robertson, F.C.3    Hubbard, K.E.4    Webb, A.A.5
  • 27
    • 84870815048 scopus 로고    scopus 로고
    • Circadian clock regulates dynamic chromatin modifications associated with Arabidopsis CCA1/LHY and TOC1 transcriptional rhythms
    • COI: 1:CAS:528:DC%2BC38XhvVSnurnF, PID: 23128602
    • Hemmes H, Henriques R, Jang IC, Kim S, Chua NH (2012) Circadian clock regulates dynamic chromatin modifications associated with ArabidopsisCCA1/LHY and TOC1 transcriptional rhythms. Plant Cell Physiol 53:2016–2029
    • (2012) Plant Cell Physiol , vol.53 , pp. 2016-2029
    • Hemmes, H.1    Henriques, R.2    Jang, I.C.3    Kim, S.4    Chua, N.H.5
  • 28
    • 45349108094 scopus 로고    scopus 로고
    • Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading
    • COI: 1:CAS:528:DC%2BD1cXnvVWmsbw%3D, PID: 18559476
    • Henderson IR, Jacobsen SE (2008) Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading. Genes Dev 22:1597–1606
    • (2008) Genes Dev , vol.22 , pp. 1597-1606
    • Henderson, I.R.1    Jacobsen, S.E.2
  • 29
    • 84879185229 scopus 로고    scopus 로고
    • Chromatin remodeling and alternative splicing: pre- and post-transcriptional regulation of the Arabidopsis circadian clock
    • COI: 1:CAS:528:DC%2BC3sXlt1eqtr0%3D, PID: 23499867
    • Henriques R, Mas P (2013) Chromatin remodeling and alternative splicing: pre- and post-transcriptional regulation of the Arabidopsis circadian clock. Semin Cell Dev Biol 24:399–406
    • (2013) Semin Cell Dev Biol , vol.24 , pp. 399-406
    • Henriques, R.1    Mas, P.2
  • 31
    • 48249157844 scopus 로고    scopus 로고
    • Histone deacetylase genes in Arabidopsis development
    • Hollender C, Liu Z (2008) Histone deacetylase genes in Arabidopsis development. J Integr Plant Biol 875–885
    • (2008) J Integr Plant Biol , pp. 875-885
    • Hollender, C.1    Liu, Z.2
  • 32
    • 84869761559 scopus 로고    scopus 로고
    • Circadian phase has profound effects on differential expression analysis
    • COI: 1:CAS:528:DC%2BC38XhvVWnu7jE, PID: 23185460
    • Hsu PY, Harmer SL (2012) Circadian phase has profound effects on differential expression analysis. PLoS One 7:e49853
    • (2012) PLoS One , vol.7 , pp. e49853
    • Hsu, P.Y.1    Harmer, S.L.2
  • 33
    • 84859508042 scopus 로고    scopus 로고
    • Mapping the core of the Arabidopsis circadian clock defines the network structure of the oscillator
    • COI: 1:CAS:528:DC%2BC38XkvV2rsrg%3D, PID: 22403178
    • Huang W, Pérez-García P, Pokhilko A, Millar AJ, Antoshechkin I, Riechmann JL, Mas P (2012) Mapping the core of the Arabidopsis circadian clock defines the network structure of the oscillator. Science 336:75–79
    • (2012) Science , vol.336 , pp. 75-79
    • Huang, W.1    Pérez-García, P.2    Pokhilko, A.3    Millar, A.J.4    Antoshechkin, I.5    Riechmann, J.L.6    Mas, P.7
  • 34
    • 84861402657 scopus 로고    scopus 로고
    • LOV domain-containing F-box proteins: light-dependent protein degradation modules in Arabidopsis
    • PID: 22402262
    • Ito S, Song YH, Imaizumi T (2012) LOV domain-containing F-box proteins: light-dependent protein degradation modules in Arabidopsis. Mol Plant 5:573–582
    • (2012) Mol Plant , vol.5 , pp. 573-582
    • Ito, S.1    Song, Y.H.2    Imaizumi, T.3
  • 37
    • 78650717705 scopus 로고    scopus 로고
    • Jumonji domain protein JMJD5 functions in both the plant and human circadian systems
    • COI: 1:CAS:528:DC%2BC3cXhs1WisL3F, PID: 21115819
    • Jones MA, Covington MF, DiTacchio L, Vollmers C, Panda S, Harmer SL (2010) Jumonji domain protein JMJD5 functions in both the plant and human circadian systems. Proc Natl Acad Sci USA 107:21623–21628
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 21623-21628
    • Jones, M.A.1    Covington, M.F.2    DiTacchio, L.3    Vollmers, C.4    Panda, S.5    Harmer, S.L.6
  • 38
    • 0037418586 scopus 로고    scopus 로고
    • Role of CG and non-CG methylation in immobilization of transposons in Arabidopsis
    • COI: 1:CAS:528:DC%2BD3sXhvFaiurw%3D, PID: 12620192
    • Kato M, Miura A, Bender J, Jacobsen SE, Kakutani T (2003) Role of CG and non-CG methylation in immobilization of transposons in Arabidopsis. Curr Biol 13:421–426
    • (2003) Curr Biol , vol.13 , pp. 421-426
    • Kato, M.1    Miura, A.2    Bender, J.3    Jacobsen, S.E.4    Kakutani, T.5
  • 39
    • 35348856969 scopus 로고    scopus 로고
    • Targeted degradation of PSEUDO-RESPONSE REGULATOR5 by an SCFZTL complex regulates clock function and photomorphogenesis in Arabidopsis thaliana
    • COI: 1:CAS:528:DC%2BD2sXhtFyisbnO, PID: 17693530
    • Kiba T, Henriques R, Sakakibara H, Chua NH (2007) Targeted degradation of PSEUDO-RESPONSE REGULATOR5 by an SCFZTL complex regulates clock function and photomorphogenesis in Arabidopsisthaliana. Plant Cell 19:2516–2530
    • (2007) Plant Cell , vol.19 , pp. 2516-2530
    • Kiba, T.1    Henriques, R.2    Sakakibara, H.3    Chua, N.H.4
  • 40
    • 0037447277 scopus 로고    scopus 로고
    • Circadian phase-specific degradation of the F-box protein ZTL is mediated by the proteasome
    • COI: 1:CAS:528:DC%2BD3sXjt12nt7Y%3D, PID: 12665620
    • Kim WY, Geng R, Somers DE (2003) Circadian phase-specific degradation of the F-box protein ZTL is mediated by the proteasome. Proc Natl Acad Sci USA 100:4933–4938
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 4933-4938
    • Kim, W.Y.1    Geng, R.2    Somers, D.E.3
  • 41
    • 77956878957 scopus 로고    scopus 로고
    • Growth habit determination by the balance of histone methylation activities in Arabidopsis
    • COI: 1:CAS:528:DC%2BC3cXhtVais7bJ, PID: 20711170
    • Ko JH, Mitina I, Tamada Y, Hyun Y, Choi Y, Amasino RM, Noh B, Noh YS (2010) Growth habit determination by the balance of histone methylation activities in Arabidopsis. EMBO J 29:3208–3215
    • (2010) EMBO J , vol.29 , pp. 3208-3215
    • Ko, J.H.1    Mitina, I.2    Tamada, Y.3    Hyun, Y.4    Choi, Y.5    Amasino, R.M.6    Noh, B.7    Noh, Y.S.8
  • 42
    • 84866864299 scopus 로고    scopus 로고
    • Phosphorylation in the plant circadian system
    • COI: 1:CAS:528:DC%2BC38XhtVSgurvE, PID: 22784827
    • Kusakina J, Dodd AN (2012) Phosphorylation in the plant circadian system. Trends Plant Sci 17:575–583
    • (2012) Trends Plant Sci , vol.17 , pp. 575-583
    • Kusakina, J.1    Dodd, A.N.2
  • 43
    • 80052228191 scopus 로고    scopus 로고
    • Interaction of Arabidopsis DET1 with CCA1 and LHY in mediating transcriptional repression in the plant circadian clock
    • COI: 1:CAS:528:DC%2BC3MXhtFeku7vK, PID: 21884973
    • Lau OS, Huang X, Charron JB, Lee JH, Li G, Deng XW (2011) Interaction of Arabidopsis DET1 with CCA1 and LHY in mediating transcriptional repression in the plant circadian clock. Mol Cell 43:703–712
    • (2011) Mol Cell , vol.43 , pp. 703-712
    • Lau, O.S.1    Huang, X.2    Charron, J.B.3    Lee, J.H.4    Li, G.5    Deng, X.W.6
  • 44
    • 79551704893 scopus 로고    scopus 로고
    • The Jumonji C domain-containing protein JMJ30 regulates period length in the Arabidopsis circadian clock
    • Lu SX, Knowles SM, Webb CJ, Celaya RB, Cha C, Siu JP, Tobin EM (2011) The Jumonji C domain-containing protein JMJ30 regulates period length in the Arabidopsis circadian clock. Plant Physiol 55:906–915
    • (2011) Plant Physiol , vol.55 , pp. 906-915
    • Lu, S.X.1    Knowles, S.M.2    Webb, C.J.3    Celaya, R.B.4    Cha, C.5    Siu, J.P.6    Tobin, E.M.7
  • 45
    • 84863012419 scopus 로고    scopus 로고
    • CCA1 and ELF3 interact in the control of hypocotyl length and flowering time in Arabidopsis
    • COI: 1:CAS:528:DC%2BC38XltVOku78%3D, PID: 22190341
    • Lu SX, Webb CJ, Knowles SM, Kim SH, Wang Z, Tobin EM (2012) CCA1 and ELF3 interact in the control of hypocotyl length and flowering time in Arabidopsis. Plant Physiol 158:1079–1088
    • (2012) Plant Physiol , vol.158 , pp. 1079-1088
    • Lu, S.X.1    Webb, C.J.2    Knowles, S.M.3    Kim, S.H.4    Wang, Z.5    Tobin, E.M.6
  • 46
    • 84871838945 scopus 로고    scopus 로고
    • Ordered changes in histone modifications at the core of the Arabidopsis circadian clock
    • COI: 1:CAS:528:DC%2BC3sXoslSksg%3D%3D, PID: 23236129
    • Malapeira J, Khaitova LC, Mas P (2012) Ordered changes in histone modifications at the core of the Arabidopsis circadian clock. Proc Natl Acad Sci USA 109:21540–21545
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 21540-21545
    • Malapeira, J.1    Khaitova, L.C.2    Mas, P.3
  • 47
    • 44649104433 scopus 로고    scopus 로고
    • Circadian clock function in Arabidopsis thaliana: time beyond transcription
    • PID: 18468438
    • Más P (2008) Circadian clock function in Arabidopsisthaliana: time beyond transcription. Trends Cell Biol 18:273–281
    • (2008) Trends Cell Biol , vol.18 , pp. 273-281
    • Más, P.1
  • 48
    • 0348134861 scopus 로고    scopus 로고
    • Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana
    • PID: 14654842
    • Más P, Kim WY, Somers DE, Kay SA (2003) Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsisthaliana. Nature 426:567–570
    • (2003) Nature , vol.426 , pp. 567-570
    • Más, P.1    Kim, W.Y.2    Somers, D.E.3    Kay, S.A.4
  • 49
    • 0033828434 scopus 로고    scopus 로고
    • Transcriptional transgene silencing and chromatin components
    • COI: 1:CAS:528:DC%2BD3cXmsFyqurc%3D, PID: 10999406
    • Meyer P (2000) Transcriptional transgene silencing and chromatin components. Plant Mol Biol 43:221–234
    • (2000) Plant Mol Biol , vol.43 , pp. 221-234
    • Meyer, P.1
  • 50
    • 40849124054 scopus 로고    scopus 로고
    • Comparative transcriptome of diurnally oscillating genes and hormone-responsive genes in Arabidopsis thaliana: insight into circadian clock-controlled daily responses to common ambient stresses in plants
    • COI: 1:CAS:528:DC%2BD1cXkvVWjsro%3D, PID: 18202002
    • Mizuno T, Yamashino T (2008) Comparative transcriptome of diurnally oscillating genes and hormone-responsive genes in Arabidopsisthaliana: insight into circadian clock-controlled daily responses to common ambient stresses in plants. Plant Cell Physiol 49:481–487
    • (2008) Plant Cell Physiol , vol.49 , pp. 481-487
    • Mizuno, T.1    Yamashino, T.2
  • 52
    • 84865204375 scopus 로고    scopus 로고
    • Complexity in the wiring and regulation of plant circadian networks
    • COI: 1:CAS:528:DC%2BC38Xht1emsLnM, PID: 22917516
    • Nagel DH, Kay SA (2012) Complexity in the wiring and regulation of plant circadian networks. Curr Biol 22:R648–R657
    • (2012) Curr Biol , vol.22 , pp. R648-R657
    • Nagel, D.H.1    Kay, S.A.2
  • 53
    • 47549088250 scopus 로고    scopus 로고
    • The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control
    • COI: 1:CAS:528:DC%2BD1cXptlalurg%3D, PID: 18662547
    • Nakahata Y, Kaluzova M, Grimaldi B, Sahar S, Hirayama J, Chen D, Guarente LP, Sassone-Corsi P (2008) The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control. Cell 134:329–340
    • (2008) Cell , vol.134 , pp. 329-340
    • Nakahata, Y.1    Kaluzova, M.2    Grimaldi, B.3    Sahar, S.4    Hirayama, J.5    Chen, D.6    Guarente, L.P.7    Sassone-Corsi, P.8
  • 54
    • 65549118773 scopus 로고    scopus 로고
    • Circadian control of the NAD+ salvage pathway by CLOCK-SIRT1
    • COI: 1:CAS:528:DC%2BD1MXltFCisL8%3D, PID: 19286518
    • Nakahata Y, Sahar S, Astarita G, Kaluzova M, Sassone-Corsi P (2009) Circadian control of the NAD+ salvage pathway by CLOCK-SIRT1. Science 324:654–657
    • (2009) Science , vol.324 , pp. 654-657
    • Nakahata, Y.1    Sahar, S.2    Astarita, G.3    Kaluzova, M.4    Sassone-Corsi, P.5
  • 55
    • 20444398523 scopus 로고    scopus 로고
    • PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, together play essential roles close to the circadian clock of Arabidopsis thaliana
    • COI: 1:CAS:528:DC%2BD2MXkvVWqur4%3D, PID: 15767265
    • Nakamichi N, Kita M, Ito S, Yamashino T, Mizuno T (2005) PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, together play essential roles close to the circadian clock of Arabidopsisthaliana. Plant Cell Physiol 46:686–698
    • (2005) Plant Cell Physiol , vol.46 , pp. 686-698
    • Nakamichi, N.1    Kita, M.2    Ito, S.3    Yamashino, T.4    Mizuno, T.5
  • 56
    • 77952919484 scopus 로고    scopus 로고
    • PSEUDO-RESPONSE REGULATORS 9, 7, and 5 are transcriptional repressors in the Arabidopsis circadian clock
    • COI: 1:CAS:528:DC%2BC3cXmsF2ks78%3D, PID: 20233950
    • Nakamichi N, Kiba T, Henriques R, Mizuno T, Chua NH, Sakakibara H (2010) PSEUDO-RESPONSE REGULATORS 9, 7, and 5 are transcriptional repressors in the Arabidopsis circadian clock. Plant Cell 22:594–605
    • (2010) Plant Cell , vol.22 , pp. 594-605
    • Nakamichi, N.1    Kiba, T.2    Henriques, R.3    Mizuno, T.4    Chua, N.H.5    Sakakibara, H.6
  • 57
    • 0343416249 scopus 로고    scopus 로고
    • Histone deacetylases: silencers for hire
    • COI: 1:STN:280:DC%2BD3c7nsFOruw%3D%3D, PID: 10694882
    • Ng HH, Bird A (2000) Histone deacetylases: silencers for hire. Trends Biochem Sci 25:121–126
    • (2000) Trends Biochem Sci , vol.25 , pp. 121-126
    • Ng, H.H.1    Bird, A.2
  • 58
    • 36749068882 scopus 로고    scopus 로고
    • Regulation of flowering time by the protein arginine methyltransferase AtPRMT10
    • COI: 1:CAS:528:DC%2BD2sXhtlOns7nM, PID: 18007657
    • Niu L, Lu F, Pei Y, Liu C, Cao X (2007) Regulation of flowering time by the protein arginine methyltransferase AtPRMT10. EMBO Rep 8:1190–1195
    • (2007) EMBO Rep , vol.8 , pp. 1190-1195
    • Niu, L.1    Lu, F.2    Pei, Y.3    Liu, C.4    Cao, X.5
  • 59
    • 79960621365 scopus 로고    scopus 로고
    • The ELF4-ELF3-LUX complex links the circadian clock to diurnal control of hypocotyl growth
    • COI: 1:CAS:528:DC%2BC3MXoslymtLk%3D, PID: 21753751
    • Nusinow DA, Helfer A, Hamilton EE, King JJ, Imaizumi T, Schultz TF, Farré EM, Kay SA (2011) The ELF4-ELF3-LUX complex links the circadian clock to diurnal control of hypocotyl growth. Nature 475:398–402
    • (2011) Nature , vol.475 , pp. 398-402
    • Nusinow, D.A.1    Helfer, A.2    Hamilton, E.E.3    King, J.J.4    Imaizumi, T.5    Schultz, T.F.6    Farré, E.M.7    Kay, S.A.8
  • 60
    • 0036929765 scopus 로고    scopus 로고
    • Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes
    • COI: 1:CAS:528:DC%2BD38XptlOiu7Y%3D, PID: 12466527
    • Pandey R, Müller A, Napoli CA, Selinger DA, Pikaard CS, Richards EJ, Bender J, Mount DW, Jorgensen RA (2002) Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsisthaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res 30:5036–5055
    • (2002) Nucleic Acids Res , vol.30 , pp. 5036-5055
    • Pandey, R.1    Müller, A.2    Napoli, C.A.3    Selinger, D.A.4    Pikaard, C.S.5    Richards, E.J.6    Bender, J.7    Mount, D.W.8    Jorgensen, R.A.9
  • 61
    • 77955056333 scopus 로고    scopus 로고
    • Ubiquitination of LHY by SINAT5 regulates flowering time and is inhibited by DET1
    • COI: 1:CAS:528:DC%2BC3cXptlaksr8%3D, PID: 20599732
    • Park BS, Eo HJ, Jang IC, Kang HG, Song JT, Seo HS (2010) Ubiquitination of LHY by SINAT5 regulates flowering time and is inhibited by DET1. Biochem Biophys Res Commun 398:242–246
    • (2010) Biochem Biophys Res Commun , vol.398 , pp. 242-246
    • Park, B.S.1    Eo, H.J.2    Jang, I.C.3    Kang, H.G.4    Song, J.T.5    Seo, H.S.6
  • 63
    • 34548355182 scopus 로고    scopus 로고
    • A functional link between rhythmic changes in chromatin structure and the Arabidopsis biological clock
    • COI: 1:CAS:528:DC%2BD2sXhtValur%2FP, PID: 17616736
    • Perales M, Más P (2007) A functional link between rhythmic changes in chromatin structure and the Arabidopsis biological clock. Plant Cell 19:2111–2123
    • (2007) Plant Cell , vol.19 , pp. 2111-2123
    • Perales, M.1    Más, P.2
  • 64
    • 84872815534 scopus 로고    scopus 로고
    • Genomic analysis reveals novel connections between alternative splicing and circadian regulatory networks
    • PID: 23165351
    • Perez-Santángelo S, Schlaen RG, Yanovsky MJ (2013) Genomic analysis reveals novel connections between alternative splicing and circadian regulatory networks. Brief Funct Genomics 12:13–24
    • (2013) Brief Funct Genomics , vol.12 , pp. 13-24
    • Perez-Santángelo, S.1    Schlaen, R.G.2    Yanovsky, M.J.3
  • 65
    • 35649008287 scopus 로고    scopus 로고
    • Histone modifications and dynamic regulation of genome accessibility in plants
    • COI: 1:CAS:528:DC%2BD2sXht1ymu7rI, PID: 17884714
    • Pfluger J, Wagner D (2007) Histone modifications and dynamic regulation of genome accessibility in plants. Curr Opin Plant Biol 10:645–652
    • (2007) Curr Opin Plant Biol , vol.10 , pp. 645-652
    • Pfluger, J.1    Wagner, D.2
  • 66
    • 84875068918 scopus 로고    scopus 로고
    • Modelling the widespread effects of TOC1 signalling on the plant circadian clock and its outputs
    • COI: 1:CAS:528:DC%2BC3sXmtlKitLY%3D, PID: 23506153
    • Pokhilko A, Mas P, Millar AJ (2013) Modelling the widespread effects of TOC1 signalling on the plant circadian clock and its outputs. BMC Syst Biol 7:23
    • (2013) BMC Syst Biol , vol.7 , pp. 23
    • Pokhilko, A.1    Mas, P.2    Millar, A.J.3
  • 67
    • 79955434258 scopus 로고    scopus 로고
    • Arabidopsis histone lysine methyltransferases
    • COI: 1:CAS:528:DC%2BC3cXovV2nsLs%3D, PID: 20703330
    • Pontvianne F, Blevins T, Pikaard CS (2010) Arabidopsis histone lysine methyltransferases. Adv Bot Res 53:1–22
    • (2010) Adv Bot Res , vol.53 , pp. 1-22
    • Pontvianne, F.1    Blevins, T.2    Pikaard, C.S.3
  • 68
    • 78649448009 scopus 로고    scopus 로고
    • Chemogenomic profiling of the cellular effects associated with histone H3 acetylation impairment by a quinoline-derived compound
    • COI: 1:CAS:528:DC%2BC3cXhtlahsrfP, PID: 20732410
    • Ruotolo R, Tosi F, Vernarecci S, Ballario P, Mai A, Filetici P, Ottonello S (2010) Chemogenomic profiling of the cellular effects associated with histone H3 acetylation impairment by a quinoline-derived compound. Genomics 96:272–280
    • (2010) Genomics , vol.96 , pp. 272-280
    • Ruotolo, R.1    Tosi, F.2    Vernarecci, S.3    Ballario, P.4    Mai, A.5    Filetici, P.6    Ottonello, S.7
  • 69
    • 4544282973 scopus 로고    scopus 로고
    • The Arabidopsis thaliana clock
    • PID: 15534322
    • Salomé PA, McClung CR (2004) The Arabidopsisthaliana clock. J Biol Rhythms 19:425–435
    • (2004) J Biol Rhythms , vol.19 , pp. 425-435
    • Salomé, P.A.1    McClung, C.R.2
  • 70
    • 78650894699 scopus 로고    scopus 로고
    • The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation
    • PID: 21098730
    • Salomé PA, Weigel D, McClung CR (2010) The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation. Plant Cell 22:3650–3661
    • (2010) Plant Cell , vol.22 , pp. 3650-3661
    • Salomé, P.A.1    Weigel, D.2    McClung, C.R.3
  • 72
    • 84864440018 scopus 로고    scopus 로고
    • A self-regulatory circuit of CIRCADIAN CLOCK-ASSOCIATED1 underlies the circadian clock regulation of temperature responses in Arabidopsis
    • COI: 1:CAS:528:DC%2BC38Xht1Wjs7fI, PID: 22715042
    • Seo PJ, Park MJ, Lim MH, Kim SG, Lee M, Baldwin IT, Park CM (2012) A self-regulatory circuit of CIRCADIAN CLOCK-ASSOCIATED1 underlies the circadian clock regulation of temperature responses in Arabidopsis. Plant Cell 24:2427–2442
    • (2012) Plant Cell , vol.24 , pp. 2427-2442
    • Seo, P.J.1    Park, M.J.2    Lim, M.H.3    Kim, S.G.4    Lee, M.5    Baldwin, I.T.6    Park, C.M.7
  • 73
    • 21744460026 scopus 로고    scopus 로고
    • DET1 regulates the proteasomal degradation of LHY, a component of the Arabidopsis circadian clock
    • COI: 1:CAS:528:DC%2BD2MXls1ymsrw%3D, PID: 15988568
    • Song HR, Carré IA (2005) DET1 regulates the proteasomal degradation of LHY, a component of the Arabidopsis circadian clock. Plant Mol Biol 57:761–771
    • (2005) Plant Mol Biol , vol.57 , pp. 761-771
    • Song, H.R.1    Carré, I.A.2
  • 74
    • 84870317601 scopus 로고    scopus 로고
    • Rhythmic oscillation of histone acetylation and methylation at the Arabidopsis central clock loci
    • COI: 1:CAS:528:DC%2BC38Xhtl2rur%2FO, PID: 22878891
    • Song HR, Noh YS (2012) Rhythmic oscillation of histone acetylation and methylation at the Arabidopsis central clock loci. Mol Cells 34:279–287
    • (2012) Mol Cells , vol.34 , pp. 279-287
    • Song, H.R.1    Noh, Y.S.2
  • 76
    • 54549090881 scopus 로고    scopus 로고
    • Chromatin, photoperiod and the Arabidopsis circadian clock: a question of time
    • COI: 1:CAS:528:DC%2BD1cXhtlahtbfM, PID: 18708153
    • Stratmann T, Más P (2008) Chromatin, photoperiod and the Arabidopsis circadian clock: a question of time. Semin Cell Dev Biol 19:554–559
    • (2008) Semin Cell Dev Biol , vol.19 , pp. 554-559
    • Stratmann, T.1    Más, P.2
  • 77
    • 79961206886 scopus 로고    scopus 로고
    • SET domain proteins in plant development
    • COI: 1:CAS:528:DC%2BC3MXhtVaisLnF, PID: 21664308
    • Thorstensen T, Grini PE, Aalen RB (2011) SET domain proteins in plant development. Biochim Biophys Acta 1809:407–420
    • (2011) Biochim Biophys Acta , vol.1809 , pp. 407-420
    • Thorstensen, T.1    Grini, P.E.2    Aalen, R.B.3
  • 78
    • 84861367600 scopus 로고    scopus 로고
    • Newly described components and regulatory mechanisms of circadian clock function in Arabidopsis thaliana
    • PID: 22230762
    • Troncoso-Ponce MA, Mas P (2012) Newly described components and regulatory mechanisms of circadian clock function in Arabidopsisthaliana. Mol Plant 5:545–553
    • (2012) Mol Plant , vol.5 , pp. 545-553
    • Troncoso-Ponce, M.A.1    Mas, P.2
  • 79
    • 84872177734 scopus 로고    scopus 로고
    • Transcriptional corepressor TOPLESS complexes with pseudoresponse regulator proteins and histone deacetylases to regulate circadian transcription
    • COI: 1:CAS:528:DC%2BC3sXhtFOgs78%3D, PID: 23267111
    • Wang L, Kim J, Somers DE (2013) Transcriptional corepressor TOPLESS complexes with pseudoresponse regulator proteins and histone deacetylases to regulate circadian transcription. Proc Natl Acad Sci USA 110:761–766
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 761-766
    • Wang, L.1    Kim, J.2    Somers, D.E.3
  • 80
    • 26444535243 scopus 로고    scopus 로고
    • Histone acetylation affects expression of cellular patterning genes in the Arabidopsis root epidermis
    • COI: 1:CAS:528:DC%2BD2MXhtFCgsrzF, PID: 16176989
    • Xu CR, Liu C, Wang YL, Li LC, Chen WQ, Xu ZH, Bai SN (2005) Histone acetylation affects expression of cellular patterning genes in the Arabidopsis root epidermis. Proc Natl Acad Sci USA 102:14469–14474
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 14469-14474
    • Xu, C.R.1    Liu, C.2    Wang, Y.L.3    Li, L.C.4    Chen, W.Q.5    Xu, Z.H.6    Bai, S.N.7
  • 81
    • 84861951579 scopus 로고    scopus 로고
    • Nicotinamide treatment reduces the levels of histone H3K4 trimethylation in the promoter of the mper1 circadian clock gene and blocks the ability of dexamethasone to induce the acute response
    • COI: 1:CAS:528:DC%2BC38XovVahs7o%3D, PID: 22465780
    • Xydous M, Sekeri-Pataryas KE, Prombona A, Sourlingas TG (2012) Nicotinamide treatment reduces the levels of histone H3K4 trimethylation in the promoter of the mper1 circadian clock gene and blocks the ability of dexamethasone to induce the acute response. Biochim Biophys Acta 1819:877–884
    • (2012) Biochim Biophys Acta , vol.1819 , pp. 877-884
    • Xydous, M.1    Sekeri-Pataryas, K.E.2    Prombona, A.3    Sourlingas, T.G.4
  • 82
    • 84874222031 scopus 로고    scopus 로고
    • SDG2-mediated H3K4 methylation is required for proper Arabidopsis root growth and development
    • COI: 1:CAS:528:DC%2BC3sXjsFyqtL4%3D, PID: 23483879
    • Yao X, Feng H, Yu Y, Dong A, Shen WH (2013) SDG2-mediated H3K4 methylation is required for proper Arabidopsis root growth and development. PLoS One 8:e56537
    • (2013) PLoS One , vol.8 , pp. e56537
    • Yao, X.1    Feng, H.2    Yu, Y.3    Dong, A.4    Shen, W.H.5
  • 83
    • 79959982899 scopus 로고    scopus 로고
    • A genetic screen for leaf movement mutants identifies a potential role for AGAMOUS-LIKE 6 (AGL6) in circadian-clock control
    • COI: 1:CAS:528:DC%2BC3MXjvVSmsLk%3D, PID: 21331777
    • Yoo SK, Hong SM, Lee JS, Ahn JH (2011) A genetic screen for leaf movement mutants identifies a potential role for AGAMOUS-LIKE 6 (AGL6) in circadian-clock control. Mol Cells 31:281–287
    • (2011) Mol Cells , vol.31 , pp. 281-287
    • Yoo, S.K.1    Hong, S.M.2    Lee, J.S.3    Ahn, J.H.4
  • 86
    • 84866676117 scopus 로고    scopus 로고
    • Vernalization-mediated chromatin changes
    • COI: 1:CAS:528:DC%2BC38Xht1egtbrM, PID: 22685309
    • Zografos BR, Sung S (2012) Vernalization-mediated chromatin changes. J Exp Bot 63:4343–4348
    • (2012) J Exp Bot , vol.63 , pp. 4343-4348
    • Zografos, B.R.1    Sung, S.2
  • 87
    • 84866109818 scopus 로고    scopus 로고
    • De novo DNA methylation activity of methyltransferase 1 (MET1) partially restores body methylation in Arabidopsis thaliana
    • COI: 1:CAS:528:DC%2BC38XhtlSmt77L, PID: 22587613
    • Zubko E, Gentry M, Kunova A, Meyer P (2012) De novo DNA methylation activity of methyltransferase 1 (MET1) partially restores body methylation in Arabidopsisthaliana. Plant J 71:1029–1037
    • (2012) Plant J , vol.71 , pp. 1029-1037
    • Zubko, E.1    Gentry, M.2    Kunova, A.3    Meyer, P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.