Unproductive alternative splicing and nonsense mRNAs: A widespread phenomenon among plant circadian clock genes

Biology Direct

Volumn 7, Issue , 2012, Pages

  Filichkin, Sergei A ^a   Mockler, Todd C ^a,b,c  

^a OREGON STATE UNIVERSITY   (United States)

^b DONALD DANFORTH PLANT SCIENCE CENTER   (United States)

^c WASHINGTON UNIVERSITY   (United States)

Author keywords

Alternative splicing; Arabidopsis thaliana; Cassette exon; Circadian clock; CIRCADIAN CLOCK ASSOCIATED 1 (CCA1); Intron retention; LATE ELONGATED HYPOCOTYL (LHY); Nonsense mrnas; Premature termination codon; REVEILLE 2 (RVE2); RNA seq

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; EUKARYOTA; MAMMALIA; VALERIANA;

ARABIDOPSIS PROTEIN; CCA1 PROTEIN, ARABIDOPSIS; CIR1 PROTEIN, ARABIDOPSIS; DNA BINDING PROTEIN; LHY PROTEIN, ARABIDOPSIS; MESSENGER RNA; PLANT RNA; TRANSCRIPTION FACTOR;

ALTERNATIVE RNA SPLICING; ARABIDOPSIS; ARTICLE; CIRCADIAN RHYTHM; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; PHYSIOLOGY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; STOP CODON;

ALTERNATIVE SPLICING; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CIRCADIAN CLOCKS; CODON, NONSENSE; DNA-BINDING PROTEINS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; RNA, PLANT; SEQUENCE ANALYSIS, RNA; TRANSCRIPTION FACTORS;

EID: 84863089087     PISSN: None     EISSN: 17456150     Source Type: Journal    
DOI: 10.1186/1745-6150-7-20     Document Type: Article

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