-
2
-
-
84906930512
-
Digital cell quantification identifies global immune cell dynamics during influenza infection
-
Altboum Z., Steuerman Y., David E., Barnett-Itzhaki Z., Valadarsky L., Keren-Shaul H., Meningher T., Mendelson E., Mandelboim M., Gat-Viks I., Amit I. Digital cell quantification identifies global immune cell dynamics during influenza infection. Mol. Syst. Biol. 2014, 10:720.
-
(2014)
Mol. Syst. Biol.
, vol.10
, pp. 720
-
-
Altboum, Z.1
Steuerman, Y.2
David, E.3
Barnett-Itzhaki, Z.4
Valadarsky, L.5
Keren-Shaul, H.6
Meningher, T.7
Mendelson, E.8
Mandelboim, M.9
Gat-Viks, I.10
Amit, I.11
-
3
-
-
70349882120
-
Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses
-
Amit I., Garber M., Chevrier N., Leite A.P., Donner Y., Eisenhaure T., Guttman M., Grenier J.K., Li W., Zuk O., et al. Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses. Science 2009, 326:257-263.
-
(2009)
Science
, vol.326
, pp. 257-263
-
-
Amit, I.1
Garber, M.2
Chevrier, N.3
Leite, A.P.4
Donner, Y.5
Eisenhaure, T.6
Guttman, M.7
Grenier, J.K.8
Li, W.9
Zuk, O.10
-
4
-
-
0032546352
-
Dendritic cells and the control of immunity
-
Banchereau J., Steinman R.M. Dendritic cells and the control of immunity. Nature 1998, 392:245-252.
-
(1998)
Nature
, vol.392
, pp. 245-252
-
-
Banchereau, J.1
Steinman, R.M.2
-
5
-
-
33744909412
-
Sampling and signaling in plasmacytoid dendritic cells: the potential roles of Siglec-H
-
Blasius A.L., Colonna M. Sampling and signaling in plasmacytoid dendritic cells: the potential roles of Siglec-H. Trends Immunol. 2006, 27:255-260.
-
(2006)
Trends Immunol.
, vol.27
, pp. 255-260
-
-
Blasius, A.L.1
Colonna, M.2
-
6
-
-
84875207585
-
High-throughput chromatin immunoprecipitation for genome-wide mapping of invivo protein-DNA interactions and epigenomic states
-
Blecher-Gonen R., Barnett-Itzhaki Z., Jaitin D., Amann-Zalcenstein D., Lara-Astiaso D., Amit I. High-throughput chromatin immunoprecipitation for genome-wide mapping of invivo protein-DNA interactions and epigenomic states. Nat. Protoc. 2013, 8:539-554.
-
(2013)
Nat. Protoc.
, vol.8
, pp. 539-554
-
-
Blecher-Gonen, R.1
Barnett-Itzhaki, Z.2
Jaitin, D.3
Amann-Zalcenstein, D.4
Lara-Astiaso, D.5
Amit, I.6
-
7
-
-
84867712886
-
The selector gene Pax7 dictates alternate pituitary cell fates through its pioneer action on chromatin remodeling
-
Budry L., Balsalobre A., Gauthier Y., Khetchoumian K., L'honoré A., Vallette S., Brue T., Figarella-Branger D., Meij B., Drouin J. The selector gene Pax7 dictates alternate pituitary cell fates through its pioneer action on chromatin remodeling. Genes Dev. 2012, 26:2299-2310.
-
(2012)
Genes Dev.
, vol.26
, pp. 2299-2310
-
-
Budry, L.1
Balsalobre, A.2
Gauthier, Y.3
Khetchoumian, K.4
L'honoré, A.5
Vallette, S.6
Brue, T.7
Figarella-Branger, D.8
Meij, B.9
Drouin, J.10
-
8
-
-
84888877924
-
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
-
Buenrostro J.D., Giresi P.G., Zaba L.C., Chang H.Y., Greenleaf W.J. Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position. Nat. Methods 2013, 10:1213-1218.
-
(2013)
Nat. Methods
, vol.10
, pp. 1213-1218
-
-
Buenrostro, J.D.1
Giresi, P.G.2
Zaba, L.C.3
Chang, H.Y.4
Greenleaf, W.J.5
-
9
-
-
77953282048
-
The transcription factor PU.1 controls dendritic cell development and Flt3 cytokine receptor expression in a dose-dependent manner
-
Carotta S., Dakic A., D'Amico A., Pang S.H., Greig K.T., Nutt S.L., Wu L. The transcription factor PU.1 controls dendritic cell development and Flt3 cytokine receptor expression in a dose-dependent manner. Immunity 2010, 32:628-641.
-
(2010)
Immunity
, vol.32
, pp. 628-641
-
-
Carotta, S.1
Dakic, A.2
D'Amico, A.3
Pang, S.H.4
Greig, K.T.5
Nutt, S.L.6
Wu, L.7
-
10
-
-
84897709311
-
Epigenetic inheritance of cell fates during embryonic development
-
Cheedipudi S., Genolet O., Dobreva G. Epigenetic inheritance of cell fates during embryonic development. Front. Genet. 2014, 5:19. 10.3389/fgene.2014.00019.
-
(2014)
Front. Genet.
, vol.5
, pp. 19
-
-
Cheedipudi, S.1
Genolet, O.2
Dobreva, G.3
-
11
-
-
84888100092
-
A type I IFN-Flt3 ligand axis augments plasmacytoid dendritic cell development from common lymphoid progenitors
-
Chen Y.L., Chen T.T., Pai L.M., Wesoly J., Bluyssen H.A., Lee C.K. A type I IFN-Flt3 ligand axis augments plasmacytoid dendritic cell development from common lymphoid progenitors. J.Exp. Med. 2013, 210:2515-2522.
-
(2013)
J.Exp. Med.
, vol.210
, pp. 2515-2522
-
-
Chen, Y.L.1
Chen, T.T.2
Pai, L.M.3
Wesoly, J.4
Bluyssen, H.A.5
Lee, C.K.6
-
12
-
-
0036184236
-
Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4
-
Cirillo L.A., Lin F.R., Cuesta I., Friedman D., Jarnik M., Zaret K.S. Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4. Mol. Cell 2002, 9:279-289.
-
(2002)
Mol. Cell
, vol.9
, pp. 279-289
-
-
Cirillo, L.A.1
Lin, F.R.2
Cuesta, I.3
Friedman, D.4
Jarnik, M.5
Zaret, K.S.6
-
13
-
-
52949106528
-
Transcription factor E2-2 is an essential and specific regulator of plasmacytoid dendritic cell development
-
Cisse B., Caton M.L., Lehner M., Maeda T., Scheu S., Locksley R., Holmberg D., Zweier C., den Hollander N.S., Kant S.G., et al. Transcription factor E2-2 is an essential and specific regulator of plasmacytoid dendritic cell development. Cell 2008, 135:37-48.
-
(2008)
Cell
, vol.135
, pp. 37-48
-
-
Cisse, B.1
Caton, M.L.2
Lehner, M.3
Maeda, T.4
Scheu, S.5
Locksley, R.6
Holmberg, D.7
Zweier, C.8
den Hollander, N.S.9
Kant, S.G.10
-
14
-
-
77349086110
-
Comparative genomics as a tool to reveal functional equivalences between human and mouse dendritic cell subsets
-
Crozat K., Guiton R., Guilliams M., Henri S., Baranek T., Schwartz-Cornil I., Malissen B., Dalod M. Comparative genomics as a tool to reveal functional equivalences between human and mouse dendritic cell subsets. Immunol. Rev. 2010, 234:177-198.
-
(2010)
Immunol. Rev.
, vol.234
, pp. 177-198
-
-
Crozat, K.1
Guiton, R.2
Guilliams, M.3
Henri, S.4
Baranek, T.5
Schwartz-Cornil, I.6
Malissen, B.7
Dalod, M.8
-
15
-
-
79956330964
-
CpG islands and the regulation of transcription
-
Deaton A.M., Bird A. CpG islands and the regulation of transcription. Genes Dev. 2011, 25:1010-1022.
-
(2011)
Genes Dev.
, vol.25
, pp. 1010-1022
-
-
Deaton, A.M.1
Bird, A.2
-
16
-
-
0032496358
-
The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes
-
Ferrell J.E., Machleder E.M. The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes. Science 1998, 280:895-898.
-
(1998)
Science
, vol.280
, pp. 895-898
-
-
Ferrell, J.E.1
Machleder, E.M.2
-
17
-
-
84857119549
-
The role of FACT in making and breaking nucleosomes
-
Formosa T. The role of FACT in making and breaking nucleosomes. Biochim. Biophys. Acta 2013, 1819:247-255.
-
(2013)
Biochim. Biophys. Acta
, vol.1819
, pp. 247-255
-
-
Formosa, T.1
-
18
-
-
57749190368
-
Self-regulated Pax gene expression and modulation by the TGFbeta superfamily
-
Frost V., Grocott T., Eccles M.R., Chantry A. Self-regulated Pax gene expression and modulation by the TGFbeta superfamily. Crit. Rev. Biochem. Mol. Biol. 2008, 43:371-391.
-
(2008)
Crit. Rev. Biochem. Mol. Biol.
, vol.43
, pp. 371-391
-
-
Frost, V.1
Grocott, T.2
Eccles, M.R.3
Chantry, A.4
-
19
-
-
84866303839
-
A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals
-
Garber M., Yosef N., Goren A., Raychowdhury R., Thielke A., Guttman M., Robinson J., Minie B., Chevrier N., Itzhaki Z., et al. A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals. Mol. Cell 2012, 47:810-822.
-
(2012)
Mol. Cell
, vol.47
, pp. 810-822
-
-
Garber, M.1
Yosef, N.2
Goren, A.3
Raychowdhury, R.4
Thielke, A.5
Guttman, M.6
Robinson, J.7
Minie, B.8
Chevrier, N.9
Itzhaki, Z.10
-
20
-
-
78650178058
-
Continuous expression of the transcription factor e2-2 maintains the cell fate of mature plasmacytoid dendritic cells
-
Ghosh H.S., Cisse B., Bunin A., Lewis K.L., Reizis B. Continuous expression of the transcription factor e2-2 maintains the cell fate of mature plasmacytoid dendritic cells. Immunity 2010, 33:905-916.
-
(2010)
Immunity
, vol.33
, pp. 905-916
-
-
Ghosh, H.S.1
Cisse, B.2
Bunin, A.3
Lewis, K.L.4
Reizis, B.5
-
21
-
-
48749085127
-
Plasmacytoid dendritic cells: sensing nucleic acids in viral infection and autoimmune diseases
-
Gilliet M., Cao W., Liu Y.J. Plasmacytoid dendritic cells: sensing nucleic acids in viral infection and autoimmune diseases. Nat. Rev. Immunol. 2008, 8:594-606.
-
(2008)
Nat. Rev. Immunol.
, vol.8
, pp. 594-606
-
-
Gilliet, M.1
Cao, W.2
Liu, Y.J.3
-
22
-
-
84869116884
-
A genomic regulatory element that directs assembly and function of immune-specific AP-1-IRF complexes
-
Glasmacher E., Agrawal S., Chang A.B., Murphy T.L., Zeng W., Vander Lugt B., Khan A.A., Ciofani M., Spooner C.J., Rutz S., et al. A genomic regulatory element that directs assembly and function of immune-specific AP-1-IRF complexes. Science 2012, 338:975-980.
-
(2012)
Science
, vol.338
, pp. 975-980
-
-
Glasmacher, E.1
Agrawal, S.2
Chang, A.B.3
Murphy, T.L.4
Zeng, W.5
Vander Lugt, B.6
Khan, A.A.7
Ciofani, M.8
Spooner, C.J.9
Rutz, S.10
-
23
-
-
71449125977
-
Forcing cells to change lineages
-
Graf T., Enver T. Forcing cells to change lineages. Nature 2009, 462:587-594.
-
(2009)
Nature
, vol.462
, pp. 587-594
-
-
Graf, T.1
Enver, T.2
-
24
-
-
0034142238
-
PU.1 is required for myeloid-derived but not lymphoid-derived dendritic cells
-
Guerriero A., Langmuir P.B., Spain L.M., Scott E.W. PU.1 is required for myeloid-derived but not lymphoid-derived dendritic cells. Blood 2000, 95:879-885.
-
(2000)
Blood
, vol.95
, pp. 879-885
-
-
Guerriero, A.1
Langmuir, P.B.2
Spain, L.M.3
Scott, E.W.4
-
25
-
-
77952148742
-
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
-
Guttman M., Garber M., Levin J.Z., Donaghey J., Robinson J., Adiconis X., Fan L., Koziol M.J., Gnirke A., Nusbaum C., et al. Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs. Nat. Biotechnol. 2010, 28:503-510.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 503-510
-
-
Guttman, M.1
Garber, M.2
Levin, J.Z.3
Donaghey, J.4
Robinson, J.5
Adiconis, X.6
Fan, L.7
Koziol, M.J.8
Gnirke, A.9
Nusbaum, C.10
-
26
-
-
65549104157
-
Histone modifications at human enhancers reflect global cell-type-specific gene expression
-
Heintzman N.D., Hon G.C., Hawkins R.D., Kheradpour P., Stark A., Harp L.F., Ye Z., Lee L.K., Stuart R.K., Ching C.W., et al. Histone modifications at human enhancers reflect global cell-type-specific gene expression. Nature 2009, 459:108-112.
-
(2009)
Nature
, vol.459
, pp. 108-112
-
-
Heintzman, N.D.1
Hon, G.C.2
Hawkins, R.D.3
Kheradpour, P.4
Stark, A.5
Harp, L.F.6
Ye, Z.7
Lee, L.K.8
Stuart, R.K.9
Ching, C.W.10
-
27
-
-
77952567987
-
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
-
Heinz S., Benner C., Spann N., Bertolino E., Lin Y.C., Laslo P., Cheng J.X., Murre C., Singh H., Glass C.K. Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. Mol. Cell 2010, 38:576-589.
-
(2010)
Mol. Cell
, vol.38
, pp. 576-589
-
-
Heinz, S.1
Benner, C.2
Spann, N.3
Bertolino, E.4
Lin, Y.C.5
Laslo, P.6
Cheng, J.X.7
Murre, C.8
Singh, H.9
Glass, C.K.10
-
28
-
-
84888641656
-
Effect of natural genetic variation on enhancer selection and function
-
Heinz S., Romanoski C.E., Benner C., Allison K.A., Kaikkonen M.U., Orozco L.D., Glass C.K. Effect of natural genetic variation on enhancer selection and function. Nature 2013, 503:487-492.
-
(2013)
Nature
, vol.503
, pp. 487-492
-
-
Heinz, S.1
Romanoski, C.E.2
Benner, C.3
Allison, K.A.4
Kaikkonen, M.U.5
Orozco, L.D.6
Glass, C.K.7
-
29
-
-
84896711662
-
OCT4: dynamic DNA binding pioneers stem cell pluripotency
-
Jerabek S., Merino F., Scholer H.R., Cojocaru V. OCT4: dynamic DNA binding pioneers stem cell pluripotency. Biochim. Biophys. Acta 2013, 1839:138-154.
-
(2013)
Biochim. Biophys. Acta
, vol.1839
, pp. 138-154
-
-
Jerabek, S.1
Merino, F.2
Scholer, H.R.3
Cojocaru, V.4
-
30
-
-
84865273512
-
Tissue-specific mitotic bookmarking by hematopoietic transcription factor GATA1
-
Kadauke S., Udugama M.I., Pawlicki J.M., Achtman J.C., Jain D.P., Cheng Y., Hardison R.C., Blobel G.A. Tissue-specific mitotic bookmarking by hematopoietic transcription factor GATA1. Cell 2012, 150:725-737.
-
(2012)
Cell
, vol.150
, pp. 725-737
-
-
Kadauke, S.1
Udugama, M.I.2
Pawlicki, J.M.3
Achtman, J.C.4
Jain, D.P.5
Cheng, Y.6
Hardison, R.C.7
Blobel, G.A.8
-
31
-
-
84877627544
-
Nuclear receptor expression patterns in murine plasmacytoid and conventional dendritic cells
-
Karthaus N., Hontelez S., Looman M.W., van Spriel A.B., Ansems M., Adema G.J. Nuclear receptor expression patterns in murine plasmacytoid and conventional dendritic cells. Mol. Immunol. 2013, 55:409-417.
-
(2013)
Mol. Immunol.
, vol.55
, pp. 409-417
-
-
Karthaus, N.1
Hontelez, S.2
Looman, M.W.3
van Spriel, A.B.4
Ansems, M.5
Adema, G.J.6
-
32
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B., Trapnell C., Pop M., Salzberg S.L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009, 10:R25.
-
(2009)
Genome Biol.
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
33
-
-
84907419194
-
Immunogenetics. Chromatin state dynamics during blood formation
-
Lara-Astiaso D., Weiner A., Lorenzo-Vivas E., Zaretsky I., Jaitin D.A., David E., Keren-Shaul H., Mildner A., Winter D., Jung S., et al. Immunogenetics. Chromatin state dynamics during blood formation. Science 2014, 345:943-949.
-
(2014)
Science
, vol.345
, pp. 943-949
-
-
Lara-Astiaso, D.1
Weiner, A.2
Lorenzo-Vivas, E.3
Zaretsky, I.4
Jaitin, D.A.5
David, E.6
Keren-Shaul, H.7
Mildner, A.8
Winter, D.9
Jung, S.10
-
34
-
-
0033592606
-
Learning the parts of objects by non-negative matrix factorization
-
Lee D.D., Seung H.S. Learning the parts of objects by non-negative matrix factorization. Nature 1999, 401:788-791.
-
(1999)
Nature
, vol.401
, pp. 788-791
-
-
Lee, D.D.1
Seung, H.S.2
-
35
-
-
40849085514
-
FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription
-
Lupien M., Eeckhoute J., Meyer C.A., Wang Q., Zhang Y., Li W., Carroll J.S., Liu X.S., Brown M. FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription. Cell 2008, 132:958-970.
-
(2008)
Cell
, vol.132
, pp. 958-970
-
-
Lupien, M.1
Eeckhoute, J.2
Meyer, C.A.3
Wang, Q.4
Zhang, Y.5
Li, W.6
Carroll, J.S.7
Liu, X.S.8
Brown, M.9
-
36
-
-
0033012030
-
An advanced culture method for generating large quantities of highly pure dendritic cells from mouse bone marrow
-
Lutz M.B., Kukutsch N., Ogilvie A.L., Rössner S., Koch F., Romani N., Schuler G. An advanced culture method for generating large quantities of highly pure dendritic cells from mouse bone marrow. J.Immunol. Methods 1999, 223:77-92.
-
(1999)
J.Immunol. Methods
, vol.223
, pp. 77-92
-
-
Lutz, M.B.1
Kukutsch, N.2
Ogilvie, A.L.3
Rössner, S.4
Koch, F.5
Romani, N.6
Schuler, G.7
-
37
-
-
79958833141
-
The transcription factor Pax5 regulates its target genes by recruiting chromatin-modifying proteins in committed B cells
-
McManus S., Ebert A., Salvagiotto G., Medvedovic J., Sun Q., Tamir I., Jaritz M., Tagoh H., Busslinger M. The transcription factor Pax5 regulates its target genes by recruiting chromatin-modifying proteins in committed B cells. EMBO J. 2011, 30:2388-2404.
-
(2011)
EMBO J.
, vol.30
, pp. 2388-2404
-
-
McManus, S.1
Ebert, A.2
Salvagiotto, G.3
Medvedovic, J.4
Sun, Q.5
Tamir, I.6
Jaritz, M.7
Tagoh, H.8
Busslinger, M.9
-
38
-
-
84873602003
-
Mononuclear phagocyte miRNome analysis identifies miR-142 as critical regulator of murine dendritic cell homeostasis
-
Mildner A., Chapnik E., Manor O., Yona S., Kim K.W., Aychek T., Varol D., Beck G., Itzhaki Z.B., Feldmesser E., et al. Mononuclear phagocyte miRNome analysis identifies miR-142 as critical regulator of murine dendritic cell homeostasis. Blood 2013, 121:1016-1027.
-
(2013)
Blood
, vol.121
, pp. 1016-1027
-
-
Mildner, A.1
Chapnik, E.2
Manor, O.3
Yona, S.4
Kim, K.W.5
Aychek, T.6
Varol, D.7
Beck, G.8
Itzhaki, Z.B.9
Feldmesser, E.10
-
39
-
-
84884375843
-
A close encounter of the third kind: monocyte-derived cells
-
Mildner A., Yona S., Jung S. A close encounter of the third kind: monocyte-derived cells. Adv. Immunol. 2013, 120:69-103.
-
(2013)
Adv. Immunol.
, vol.120
, pp. 69-103
-
-
Mildner, A.1
Yona, S.2
Jung, S.3
-
40
-
-
78651479749
-
The genomic landscapes of inflammation
-
Natoli G., Ghisletti S., Barozzi I. The genomic landscapes of inflammation. Genes Dev. 2011, 25:101-106.
-
(2011)
Genes Dev.
, vol.25
, pp. 101-106
-
-
Natoli, G.1
Ghisletti, S.2
Barozzi, I.3
-
41
-
-
0038068036
-
Murine thymic plasmacytoid dendritic cells
-
Okada T., Lian Z.X., Naiki M., Ansari A.A., Ikehara S., Gershwin M.E. Murine thymic plasmacytoid dendritic cells. Eur. J. Immunol. 2003, 33:1012-1019.
-
(2003)
Eur. J. Immunol.
, vol.33
, pp. 1012-1019
-
-
Okada, T.1
Lian, Z.X.2
Naiki, M.3
Ansari, A.A.4
Ikehara, S.5
Gershwin, M.E.6
-
42
-
-
0034023062
-
Pax2 and homeodomain proteins cooperatively regulate a 435bp enhancer of the mouse Pax5 gene at the midbrain-hindbrain boundary
-
Pfeffer P.L., Bouchard M., Busslinger M. Pax2 and homeodomain proteins cooperatively regulate a 435bp enhancer of the mouse Pax5 gene at the midbrain-hindbrain boundary. Development 2000, 127:1017-1028.
-
(2000)
Development
, vol.127
, pp. 1017-1028
-
-
Pfeffer, P.L.1
Bouchard, M.2
Busslinger, M.3
-
43
-
-
84881529198
-
The prognostic significance of IRF8 transcripts in adult patients with acute myeloid leukemia
-
Pogosova-Agadjanyan E.L., Kopecky K.J., Ostronoff F., Appelbaum F.R., Godwin J., Lee H., List A.F., May J.J., Oehler V.G., Petersdorf S., et al. The prognostic significance of IRF8 transcripts in adult patients with acute myeloid leukemia. PLoS ONE 2013, 8:e70812.
-
(2013)
PLoS ONE
, vol.8
, pp. e70812
-
-
Pogosova-Agadjanyan, E.L.1
Kopecky, K.J.2
Ostronoff, F.3
Appelbaum, F.R.4
Godwin, J.5
Lee, H.6
List, A.F.7
May, J.J.8
Oehler, V.G.9
Petersdorf, S.10
-
44
-
-
84864325308
-
Classical dendritic cells as a unique immune cell lineage
-
Reizis B. Classical dendritic cells as a unique immune cell lineage. J.Exp. Med. 2012, 209:1053-1056.
-
(2012)
J.Exp. Med.
, vol.209
, pp. 1053-1056
-
-
Reizis, B.1
-
45
-
-
84866975037
-
Foxp3 exploits a pre-existent enhancer landscape for regulatory Tcell lineage specification
-
Samstein R.M., Arvey A., Josefowicz S.Z., Peng X., Reynolds A., Sandstrom R., Neph S., Sabo P., Kim J.M., Liao W., et al. Foxp3 exploits a pre-existent enhancer landscape for regulatory Tcell lineage specification. Cell 2012, 151:153-166.
-
(2012)
Cell
, vol.151
, pp. 153-166
-
-
Samstein, R.M.1
Arvey, A.2
Josefowicz, S.Z.3
Peng, X.4
Reynolds, A.5
Sandstrom, R.6
Neph, S.7
Sabo, P.8
Kim, J.M.9
Liao, W.10
-
46
-
-
84878605147
-
PU.1 level-directed chromatin structure remodeling at the Irf8 gene drives dendritic cell commitment
-
Schonheit J., Kuhl C., Gebhardt M.L., Klett F.F., Riemke P., Scheller M., Huang G., Naumann R., Leutz A., Stocking C., et al. PU.1 level-directed chromatin structure remodeling at the Irf8 gene drives dendritic cell commitment. Cell Rep. 2013, 3:1617-1628.
-
(2013)
Cell Rep.
, vol.3
, pp. 1617-1628
-
-
Schonheit, J.1
Kuhl, C.2
Gebhardt, M.L.3
Klett, F.F.4
Riemke, P.5
Scheller, M.6
Huang, G.7
Naumann, R.8
Leutz, A.9
Stocking, C.10
-
47
-
-
84883830692
-
Inflammatory dendritic cells in mice and humans
-
Segura E., Amigorena S. Inflammatory dendritic cells in mice and humans. Trends Immunol. 2013, 34:440-445.
-
(2013)
Trends Immunol.
, vol.34
, pp. 440-445
-
-
Segura, E.1
Amigorena, S.2
-
48
-
-
0036518287
-
Mouse and human dendritic cell subtypes
-
Shortman K., Liu Y.J. Mouse and human dendritic cell subtypes. Nat. Rev. Immunol. 2002, 2:151-161.
-
(2002)
Nat. Rev. Immunol.
, vol.2
, pp. 151-161
-
-
Shortman, K.1
Liu, Y.J.2
-
49
-
-
0034684654
-
Id2 and Id3 inhibit development of CD34(+) stem cells into predendritic cell (pre-DC)2 but not into pre-DC1. Evidence for a lymphoid origin of pre-DC2
-
Spits H., Couwenberg F., Bakker A.Q., Weijer K., Uittenbogaart C.H. Id2 and Id3 inhibit development of CD34(+) stem cells into predendritic cell (pre-DC)2 but not into pre-DC1. Evidence for a lymphoid origin of pre-DC2. J.Exp. Med. 2000, 192:1775-1784.
-
(2000)
J.Exp. Med.
, vol.192
, pp. 1775-1784
-
-
Spits, H.1
Couwenberg, F.2
Bakker, A.Q.3
Weijer, K.4
Uittenbogaart, C.H.5
-
50
-
-
84878752817
-
Lymphoid to myeloid cell trans-differentiation is determined by C/EBPβ structure and post-translational modifications
-
Stoilova B., Kowenz-Leutz E., Scheller M., Leutz A. Lymphoid to myeloid cell trans-differentiation is determined by C/EBPβ structure and post-translational modifications. PLoS ONE 2013, 8:e65169.
-
(2013)
PLoS ONE
, vol.8
, pp. e65169
-
-
Stoilova, B.1
Kowenz-Leutz, E.2
Scheller, M.3
Leutz, A.4
-
51
-
-
14044270784
-
IFN regulatory factor-4 and -8 govern dendritic cell subset development and their functional diversity
-
Tamura T., Tailor P., Yamaoka K., Kong H.J., Tsujimura H., O'Shea J.J., Singh H., Ozato K. IFN regulatory factor-4 and -8 govern dendritic cell subset development and their functional diversity. J.Immunol. 2005, 174:2573-2581.
-
(2005)
J.Immunol.
, vol.174
, pp. 2573-2581
-
-
Tamura, T.1
Tailor, P.2
Yamaoka, K.3
Kong, H.J.4
Tsujimura, H.5
O'Shea, J.J.6
Singh, H.7
Ozato, K.8
-
52
-
-
65449136284
-
TopHat: discovering splice junctions with RNA-Seq
-
Trapnell C., Pachter L., Salzberg S.L. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 2009, 25:1105-1111.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
53
-
-
0036681793
-
IFN consensus sequence binding protein/IFN regulatory factor-8 guides bone marrow progenitor cells toward the macrophage lineage
-
Tsujimura H., Nagamura-Inoue T., Tamura T., Ozato K. IFN consensus sequence binding protein/IFN regulatory factor-8 guides bone marrow progenitor cells toward the macrophage lineage. J.Immunol. 2002, 169:1261-1269.
-
(2002)
J.Immunol.
, vol.169
, pp. 1261-1269
-
-
Tsujimura, H.1
Nagamura-Inoue, T.2
Tamura, T.3
Ozato, K.4
-
54
-
-
84870027825
-
STATs shape the active enhancer landscape of Tcell populations
-
Vahedi G., Takahashi H., Nakayamada S., Sun H.W., Sartorelli V., Kanno Y., O'Shea J.J. STATs shape the active enhancer landscape of Tcell populations. Cell 2012, 151:981-993.
-
(2012)
Cell
, vol.151
, pp. 981-993
-
-
Vahedi, G.1
Takahashi, H.2
Nakayamada, S.3
Sun, H.W.4
Sartorelli, V.5
Kanno, Y.6
O'Shea, J.J.7
-
55
-
-
84892815323
-
Transcriptional programming of dendritic cells for enhanced MHC class II antigen presentation
-
Vander Lugt B., Khan A.A., Hackney J.A., Agrawal S., Lesch J., Zhou M., Lee W.P., Park S., Xu M., Devoss J., et al. Transcriptional programming of dendritic cells for enhanced MHC class II antigen presentation. Nat. Immunol. 2014, 15:161-167.
-
(2014)
Nat. Immunol.
, vol.15
, pp. 161-167
-
-
Vander Lugt, B.1
Khan, A.A.2
Hackney, J.A.3
Agrawal, S.4
Lesch, J.5
Zhou, M.6
Lee, W.P.7
Park, S.8
Xu, M.9
Devoss, J.10
-
56
-
-
0033999965
-
Recruitment of the SWI-SNF chromatin remodeling complex as a mechanism of gene activation by the glucocorticoid receptor tau1 activation domain
-
Wallberg A.E., Neely K.E., Hassan A.H., Gustafsson J.A., Workman J.L., Wright A.P. Recruitment of the SWI-SNF chromatin remodeling complex as a mechanism of gene activation by the glucocorticoid receptor tau1 activation domain. Mol. Cell. Biol. 2000, 20:2004-2013.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 2004-2013
-
-
Wallberg, A.E.1
Neely, K.E.2
Hassan, A.H.3
Gustafsson, J.A.4
Workman, J.L.5
Wright, A.P.6
-
57
-
-
84905989433
-
The role of chromatin dynamics in immune cell development
-
Winter D.R., Amit I. The role of chromatin dynamics in immune cell development. Immunol. Rev. 2014, 261:9-22.
-
(2014)
Immunol. Rev.
, vol.261
, pp. 9-22
-
-
Winter, D.R.1
Amit, I.2
-
59
-
-
2542455620
-
Stepwise reprogramming of B cells into macrophages
-
Xie H., Ye M., Feng R., Graf T. Stepwise reprogramming of B cells into macrophages. Cell 2004, 117:663-676.
-
(2004)
Cell
, vol.117
, pp. 663-676
-
-
Xie, H.1
Ye, M.2
Feng, R.3
Graf, T.4
-
60
-
-
84870017183
-
Designing an enhancer landscape
-
Xu J., Smale S.T. Designing an enhancer landscape. Cell 2012, 151:929-931.
-
(2012)
Cell
, vol.151
, pp. 929-931
-
-
Xu, J.1
Smale, S.T.2
-
61
-
-
84859524889
-
Chromatin "pre-pattern" and epigenetic modulation in the cell fate choice of liver over pancreas in the endoderm
-
Xu C.R., Zaret K.S. Chromatin "pre-pattern" and epigenetic modulation in the cell fate choice of liver over pancreas in the endoderm. Nucleus 2012, 3:150-154.
-
(2012)
Nucleus
, vol.3
, pp. 150-154
-
-
Xu, C.R.1
Zaret, K.S.2
-
62
-
-
34547635650
-
Pioneer factor interactions and unmethylated CpG dinucleotides mark silent tissue-specific enhancers in embryonic stem cells
-
Xu J., Pope S.D., Jazirehi A.R., Attema J.L., Papathanasiou P., Watts J.A., Zaret K.S., Weissman I.L., Smale S.T. Pioneer factor interactions and unmethylated CpG dinucleotides mark silent tissue-specific enhancers in embryonic stem cells. Proc. Natl. Acad. Sci. USA 2007, 104:12377-12382.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 12377-12382
-
-
Xu, J.1
Pope, S.D.2
Jazirehi, A.R.3
Attema, J.L.4
Papathanasiou, P.5
Watts, J.A.6
Zaret, K.S.7
Weissman, I.L.8
Smale, S.T.9
-
63
-
-
79953699973
-
SeqMINER: an integrated ChIP-seq data interpretation platform
-
Ye T., Krebs A.R., Choukrallah M.A., Keime C., Plewniak F., Davidson I., Tora L. seqMINER: an integrated ChIP-seq data interpretation platform. Nucleic Acids Res. 2011, 39:e35.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. e35
-
-
Ye, T.1
Krebs, A.R.2
Choukrallah, M.A.3
Keime, C.4
Plewniak, F.5
Davidson, I.6
Tora, L.7
-
64
-
-
80455144479
-
Pioneer transcription factors: establishing competence for gene expression
-
Zaret K.S., Carroll J.S. Pioneer transcription factors: establishing competence for gene expression. Genes Dev. 2011, 25:2227-2241.
-
(2011)
Genes Dev.
, vol.25
, pp. 2227-2241
-
-
Zaret, K.S.1
Carroll, J.S.2
-
65
-
-
68549136904
-
Pioneer factors, genetic competence, and inductive signaling: programming liver and pancreas progenitors from the endoderm
-
Zaret K.S., Watts J., Xu J., Wandzioch E., Smale S.T., Sekiya T. Pioneer factors, genetic competence, and inductive signaling: programming liver and pancreas progenitors from the endoderm. Cold Spring Harb. Symp. Quant. Biol. 2008, 73:119-126.
-
(2008)
Cold Spring Harb. Symp. Quant. Biol.
, vol.73
, pp. 119-126
-
-
Zaret, K.S.1
Watts, J.2
Xu, J.3
Wandzioch, E.4
Smale, S.T.5
Sekiya, T.6
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