-
1
-
-
0037255072
-
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
-
Boeckmann, B. et al. (2003) The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res., 31, 365-370.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 365-370
-
-
Boeckmann, B.1
-
2
-
-
3142702204
-
TANDEM: Matching proteins with tandem mass spectra
-
Craig, R. and Beavis, R.C. (2004) TANDEM: matching proteins with tandem mass spectra. Bioinformatics, 20, 1466-1467.
-
(2004)
Bioinformatics
, vol.20
, pp. 1466-1467
-
-
Craig, R.1
Beavis, R.C.2
-
3
-
-
0036807449
-
Error tolerant searching of uninterpreted tandem mass spectrometry data
-
Creasy, D.M. and Cottrell, J.S. (2002) Error tolerant searching of uninterpreted tandem mass spectrometry data. Proteomics, 2, 1426-1434.
-
(2002)
Proteomics
, vol.2
, pp. 1426-1434
-
-
Creasy, D.M.1
Cottrell, J.S.2
-
4
-
-
33847630405
-
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
-
Elias, J.E. and Gygi, S.P. (2007) Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat. Methods, 4, 207-214.
-
(2007)
Nat. Methods
, vol.4
, pp. 207-214
-
-
Elias, J.E.1
Gygi, S.P.2
-
5
-
-
78651330430
-
COSMIC: Mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer
-
Forbes, S.A. et al. (2011) COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer. Nucleic Acids Res., 39, D945-D950.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. D945-D950
-
-
Forbes, S.A.1
-
6
-
-
84905001675
-
RTANDEM, an R/Bioconductor package for MS/MS protein identification
-
Fournier, F. et al. (2014) rTANDEM, an R/Bioconductor package for MS/MS protein identification. Bioinformatics.
-
(2014)
Bioinformatics
-
-
Fournier, F.1
-
7
-
-
84975795680
-
An integrated map of genetic variation from 1, 092 human genomes
-
1000 Genomes Project Consortium
-
1000 Genomes Project Consortium. (2012) An integrated map of genetic variation from 1, 092 human genomes. Nature, 491, 56-65.
-
(2012)
Nature
, vol.491
, pp. 56-65
-
-
-
8
-
-
13444266370
-
Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
-
Hamosh, A. et al. (2005) Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders. Nucleic Acids Res., 33, D514-D517.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. D514-D517
-
-
Hamosh, A.1
-
9
-
-
0032918736
-
The protein mutant database
-
Kawabata, T. et al. (1999) The protein mutant database. Nucleic Acids Res., 27, 355-357.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 355-357
-
-
Kawabata, T.1
-
10
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Li, H. et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics, 25, 2078-2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
-
11
-
-
79955765660
-
A bioinformatics workflow for variant peptide detection in shotgun proteomics
-
006536
-
Li, J. et al. (2011) A bioinformatics workflow for variant peptide detection in shotgun proteomics. Mol. Cell. Proteomics, 10, M110 006536.
-
(2011)
Mol. Cell. Proteomics
, vol.10
, pp. M110
-
-
Li, J.1
-
12
-
-
77956295988
-
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
-
McKenna, A. et al. (2010) The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res., 20, 1297-1303.
-
(2010)
Genome Res.
, vol.20
, pp. 1297-1303
-
-
McKenna, A.1
-
13
-
-
77950650434
-
XTandem Parser: An open-source library to parse and analyse X!Tandem MS/MS search results
-
Muth, T. et al. (2010) XTandem Parser: an open-source library to parse and analyse X!Tandem MS/MS search results. Proteomics, 10, 1522-1524.
-
(2010)
Proteomics
, vol.10
, pp. 1522-1524
-
-
Muth, T.1
-
14
-
-
0042338362
-
A statistical model for identifying proteins by tandem mass spectrometry
-
Nesvizhskii, A.I. et al. (2003) A statistical model for identifying proteins by tandem mass spectrometry. Anal. Chem., 75, 4646-4658.
-
(2003)
Anal. Chem.
, vol.75
, pp. 4646-4658
-
-
Nesvizhskii, A.I.1
-
15
-
-
84863229628
-
Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome
-
Peng, Z. et al. (2012) Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome. Nat. Biotechnol., 30, 253-260.
-
(2012)
Nat. Biotechnol.
, vol.30
, pp. 253-260
-
-
Peng, Z.1
-
16
-
-
0035173378
-
DbSNP: The NCBI database of genetic variation
-
Sherry, S.T. et al. (2001) dbSNP: the NCBI database of genetic variation. Nucleic Acids Res., 29, 308-311.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 308-311
-
-
Sherry, S.T.1
-
17
-
-
84891818263
-
Large-scale mass spectrometric detection of variant peptides resulting from nonsynonymous nucleotide differences
-
Sheynkman, G.M. et al. (2014) Large-scale mass spectrometric detection of variant peptides resulting from nonsynonymous nucleotide differences. J. Proteome Res., 13, 228-240.
-
(2014)
J. Proteome Res.
, vol.13
, pp. 228-240
-
-
Sheynkman, G.M.1
-
18
-
-
84891799287
-
Omics evidence: Single nucleotide variants transmissions on chromosome 20 in liver cancer cell lines
-
Wang, Q. et al. (2014) Omics evidence: single nucleotide variants transmissions on chromosome 20 in liver cancer cell lines. J. Proteome Res., 13, 200-211.
-
(2014)
J. Proteome Res.
, vol.13
, pp. 200-211
-
-
Wang, Q.1
-
19
-
-
84894110748
-
CustomProDB: An R package to generate customized protein databases from RNA-Seq data for proteomics search
-
Wang, X. and Zhang, B. (2013) customProDB: an R package to generate customized protein databases from RNA-Seq data for proteomics search. Bioinformatics, 29, 3235-3237.
-
(2013)
Bioinformatics
, vol.29
, pp. 3235-3237
-
-
Wang, X.1
Zhang, B.2
-
20
-
-
58149185118
-
SysPIMP: The web-based systematical platform for identifying human disease-related mutated sequences from mass spectrometry
-
Xi, H. et al. (2009) SysPIMP: the web-based systematical platform for identifying human disease-related mutated sequences from mass spectrometry. Nucleic Acids Res., 37, D913-D920.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. D913-D920
-
-
Xi, H.1
|