The first invertebrate RIG-I-like receptor (RLR) homolog gene in the pacific oyster Crassostrea gigas

Fish and Shellfish Immunology

Volumn 40, Issue 2, 2014, Pages 466-471

  Zhang, Yang ^a   Yu, Feng ^a   Li, Jun ^a   Tong, Ying ^a   Zhang, Yuehuan ^a   Yu, Ziniu ^a  

^a SOUTH CHINA SEA INSTITUTE OF OCEANOLOGY   (China)

Author keywords

Antiviral immune response; Crassostrea gigas; PAMP challenge; Retinoic acid inducible gene I

Indexed keywords

BACTERIAL POLYSACCHARIDE; DEAD BOX PROTEIN; IMMUNOLOGICAL ADJUVANT; POLYINOSINIC POLYCYTIDYLIC ACID;

AMINO ACID SEQUENCE; ANIMAL; BACTERIUM; CHEMISTRY; CRASSOSTREA; DRUG EFFECTS; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; IMMUNOLOGY; METABOLISM; MOLECULAR CLONING; PHYLOGENY; SEQUENCE ALIGNMENT;

ADJUVANTS, IMMUNOLOGIC; AMINO ACID SEQUENCE; ANIMALS; BACTERIA; CLONING, MOLECULAR; CRASSOSTREA; DEAD-BOX RNA HELICASES; GENE EXPRESSION REGULATION; PHYLOGENY; POLY I-C; POLYSACCHARIDES, BACTERIAL; SEQUENCE ALIGNMENT;

EID: 84908370223     PISSN: 10504648     EISSN: 10959947     Source Type: Journal    
DOI: 10.1016/j.fsi.2014.07.029     Document Type: Article

References (33)

1. Hoebe K., Janssen E., Beutler B. The interface between innate and adaptive immunity. Nat Immunol 2004, 5:971-974.
2. Takeuchi O., Akira S. Pattern recognition receptors and inflammation. Cell 2010, 140:805-820.
3. Thompson M.R., Kaminski J.J., Kurt-Jones E.A., Fitzgerald K.A. Pattern recognition receptors and the innate immune response to viral infection. Viruses 2011, 3:920-940.
4. Yoneyama M., Fujita T. Structural mechanism of RNA recognition by the RIG-I-like receptors. Immunity 2008, 29:178-181.
5. Takeuchi O., Akira S. Innate immunity to virus infection. Immunol Rev 2009, 227:75-86.
6. Yoneyama M., Fujita T. Function of RIG-I-like receptors in antiviral innate immunity. JBiol Chem 2007, 282:15315-15318.
7. Pippig D.A., Hellmuth J.C., Cui S., Kirchhofer A., Lammens K., Lammens A., et al. The regulatory domain of the RIG-I family ATPase LGP2 senses double-stranded RNA. Nucleic Acids Res 2009, 37:2014-2025.
8. Yoneyama M., Kikuchi M., Matsumoto K., Imaizumi T., Miyagishi M., Taira K., et al. Shared and unique functions of the DExD/H-box helicases RIG-I, MDA5, and LGP2 in antiviral innate immunity. JImmunol 2005, 175:2851-2858.
9. Li X.J., Ranjith-Kumar C.T., Brooks M.T., Dharmaiah S., Herr A.B., Kao C., et al. The RIG-I-like receptor LGP2 recognizes the termini of double-stranded RNA. JBiol Chem 2009, 284:13881-13891.
10. Civril F., Bennett M., Moldt M., Deimling T., Witte G., Schiesser S., et al. The RIG-I ATPase domain structure reveals insights into ATP-dependent antiviral signalling. EMBO Rep 2011, 12:1127-1134.
11. Yoneyama M., Kikuchi M., Natsukawa T., Shinobu N., Imaizumi T., Miyagishi M., et al. The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses. Nat Immunol 2004, 5:730-737.
12. Hornung V., Ellegast J., Kim S., Brzozka K., Jung A., Kato H., et al. 5'-triphosphate RNA is the ligand for RIG-I. Science 2006, 314:994-997.
13. Pichlmair A., Schulz O., Tan C.P., Naslund T.I., Liljestrom P., Weber F., et al. RIG-I-mediated antiviral responses to single-stranded RNA bearing 5'-phosphates. Science 2006, 314:997-1001.
14. Schlee M., Roth A., Hornung V., Hagmann C.A., Wimmenauer V., Barchet W., et al. Recognition of 5f 5viral responses to single-stranded RNA bhort blunt double-stranded RNA as contained in panhandle of negative-strand virus. Immunity 2009, 31:25-34.
15. Schmidt A., Schwerd T., Hamm W., Hellmuth J.C., Cui S., Wenzel M., et al. 5. 5. recognition of 5f 5viral responses to single-stranded RNA bhort blunt dnaling via RIG-I. Proc Natl Acad Sci 2009, 106:12067-12072.
16. Habjan M., Andersson I., Klingström J., SchSchCui S., Wenzel M. 5. 5. Recognition of 5f 5viral responses to single-stranded RNA bhort blunt dnaling via RIG-I. ProcRIG-I-dependent interferon induction. PLoS One 2008, 3:e2032.
17. Wang Y., Ludwig J., Schuberth C., Goldeck M., Schlee M., Li H., et al. Structural and functional insights into 5'-ppp RNA pattern recognition by the innate immune receptor RIG-I. Nat Struct Mol Biol 2010, 17:781-787.
18. Lu C, Xu H, Ranjith-Kumar C, Brooks MT, Hou TY, Hu F, etal. The structural basis of 5f 5l insights into 5'-ppp RNA pattern recognition by the innate immune receptor RIG-I. Nat s.
19. Jiang F., Ramanathan A., Miller M.T., Tang G.Q., Gale M., Patel S.S., et al. Structural basis of RNA recognition and activation by innate immune receptor RIG-I. Nature 2011, 479:423-427.
20. Luo D., Ding S.C., Vela A., Kohlway A., Lindenbach B.D., Pyle A.M. Structural insights into RNA recognition by RIG-I. Cell 2011, 147:409-422.
21. Kowalinski E., Lunardi T., McCarthy A.A., Louber J., Brunel J., Grigorov B., et al. Structural basis for the activation of innate immune pattern-recognition receptor RIG-I by viral RNA. Cell 2011, 147:423-435.
22. Wan Q., Su J., Wang L., Chen L., Chen X. A15 nucleotide deletion mutation in coding region of the RIG-I lowers grass carp (Ctenopharyngodon idella) resistance to grass carp reovirus. Fish Shellfish Immunol 2012, 33:442-447.
23. Galiana-Arnoux D., Dostert C., Schneemann A., Hoffmann J.A., Imler J.L. Essential function invivo for Dicer-2 in host defense against RNA viruses in drosophila. Nat Immunol 2006, 7:590-597.
24. Deddouche S., Matt N., Budd A., Mueller S., Kemp C., Galiana-Arnoux D., et al. The DExD/H-box helicase Dicer-2 mediates the induction of antiviral activity in drosophila. Nat Immunol 2008, 9:1425-1432.
25. Zhang Y., He X., Li X., Fu D., Chen J., Yu Z. The second bactericidal permeability increasing protein (BPI) and its revelation of the gene duplication in the Pacific oyster, Crassostrea gigas. Fish Shellfish Immunol 2011, 30:954-963.
26. Yu F., Zhang Y., Yu Z. Characteristics and expression patterns of the lipopolysaccharide-induced TNF-alpha factor (LITAF) gene family in the Pacific oyster, Crassostrea gigas. Fish Shellfish Immunol 2012, 33:899-908.
27. Vandesompele J., De Preter K., Pattyn F., Poppe B., Van Roy N., De Paepe A., et al. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 2002, 3.
28. Wan Q., Su J., Chen X., Yang C., Chen L., Yan N., et al. Genomic sequence comparison, promoter activity, SNP detection of RIG-I gene and association with resistance/susceptibility to grass carp reovirus in grass carp (Ctenopharyngodon idella). Dev Comp Immunol 2012, 39(4):333-342.
29. Rajendran K.V., Zhang J., Liu S., Peatman E., Kucuktas H., Wang X., et al. Pathogen recognition receptors in channel catfish: II. Identification, phylogeny and expression of retinoic acid-inducible gene I (RIG-I)-like receptors (RLRs). Dev Comp Immunol 2012, 37:381-389.
30. Lu C., Xu H., Ranjith-Kumar C.T., Brooks M.T., Hou T.Y., Hu F., et al. The structural basis of 5' triphosphate double-stranded RNA recognition by RIG-I C-terminal domain. Structure 2010, 18:1032-1043.
31. Cowled C., Baker M.L., Zhou P., Tachedjian M., Wang L.F. Molecular characterisation of RIG-I-like helicases in the black flying fox, Pteropus alecto. Dev Comp Immunol 2012, 36:657-664.
32. Kimura K., Matsuzaki Y., Nishikawa Y., Kitamura H., Akasaka E., Rokunohe D., et al. Characterization of retinoic acid-inducible gene-I (RIG-I) expression corresponding to viral infection and UVB in human keratinocytes. JDermatol Sci 2012, 66:64-70.
33. Su Z.Z., Sarkar D., Emdad L., Barral P.M., Fisher P.B. Central role of interferon regulatory factor-1 (IRF-1) in controlling retinoic acid inducible gene-I (RIG-I) expression. JCell Physiol 2007, 213:502-510.