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Volumn 10, Issue 10, 2014, Pages

The Not5 Subunit of the Ccr4-Not Complex Connects Transcription and Translation

Author keywords

[No Author keywords available]

Indexed keywords

CHEMOKINE RECEPTOR CCR4; CHEMOKINE RECEPTOR CCR4 NOT5 SUBUNIT; HEAT SHOCK PROTEIN 90; HEAT SHOCK PROTEIN 90 R2TP; INITIATION FACTOR 3; MESSENGER RNA; RNA POLYMERASE II; RNA POLYMERASE II RPB1 SUBUNIT; RNA POLYMERASE II RPB4 SUBUNIT; RNA POLYMERASE II RPB7 SUBUNIT; UNCLASSIFIED DRUG; NOT5 PROTEIN, S CEREVISIAE; RPB1 PROTEIN, S CEREVISIAE; RPB4 PROTEIN, S CEREVISIAE; RPB7 PROTEIN, S CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEIN; TRANSCRIPTION FACTOR;

EID: 84908342658     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1004569     Document Type: Article
Times cited : (52)

References (55)
  • 1
    • 84867160564 scopus 로고    scopus 로고
    • The RNA polymerase II CTD coordinates transcription and RNA processing
    • Hsin JP, Manley JL, (2012) The RNA polymerase II CTD coordinates transcription and RNA processing. Genes & development 26: 2119–2137.
    • (2012) Genes & development , vol.26 , pp. 2119-2137
    • Hsin, J.P.1    Manley, J.L.2
  • 2
    • 19344363274 scopus 로고    scopus 로고
    • Cotranscriptional mRNP assembly: from the DNA to the nuclear pore
    • Aguilera A, (2005) Cotranscriptional mRNP assembly: from the DNA to the nuclear pore. Current opinion in cell biology 17: 242–250.
    • (2005) Current opinion in cell biology , vol.17 , pp. 242-250
    • Aguilera, A.1
  • 3
    • 44449142796 scopus 로고    scopus 로고
    • The CTD role in cotranscriptional RNA processing and surveillance
    • de Almeida SF, Carmo-Fonseca M, (2008) The CTD role in cotranscriptional RNA processing and surveillance. FEBS letters 582: 1971–1976.
    • (2008) FEBS letters , vol.582 , pp. 1971-1976
    • De Almeida, S.F.1    Carmo-Fonseca, M.2
  • 4
    • 78149478886 scopus 로고    scopus 로고
    • RNA polymerase II subunits link transcription and mRNA decay to translation
    • Harel-Sharvit L, Eldad N, Haimovich G, Barkai O, Duek L, et al. (2010) RNA polymerase II subunits link transcription and mRNA decay to translation. Cell 143: 552–563.
    • (2010) Cell , vol.143 , pp. 552-563
    • Harel-Sharvit, L.1    Eldad, N.2    Haimovich, G.3    Barkai, O.4    Duek, L.5
  • 5
    • 48749090496 scopus 로고    scopus 로고
    • Transcription in the nucleus and mRNA decay in the cytoplasm are coupled processes
    • Goler-Baron V, Selitrennik M, Barkai O, Haimovich G, Lotan R, et al. (2008) Transcription in the nucleus and mRNA decay in the cytoplasm are coupled processes. Genes & development 22: 2022–2027.
    • (2008) Genes & development , vol.22 , pp. 2022-2027
    • Goler-Baron, V.1    Selitrennik, M.2    Barkai, O.3    Haimovich, G.4    Lotan, R.5
  • 6
    • 84155195139 scopus 로고    scopus 로고
    • The Ccr4–not complex
    • Collart MA, Panasenko OO, (2012) The Ccr4–not complex. Gene 492: 42–53.
    • (2012) Gene , vol.492 , pp. 42-53
    • Collart, M.A.1    Panasenko, O.O.2
  • 7
    • 0242285769 scopus 로고    scopus 로고
    • Global control of gene expression in yeast by the Ccr4-Not complex
    • Collart MA, (2003) Global control of gene expression in yeast by the Ccr4-Not complex. Gene 313: 1–16.
    • (2003) Gene , vol.313 , pp. 1-16
    • Collart, M.A.1
  • 9
    • 77953629665 scopus 로고    scopus 로고
    • Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation
    • Temme C, Zhang L, Kremmer E, Ihling C, Chartier A, et al. (2010) Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation. RNA 16: 1356–1370.
    • (2010) RNA , vol.16 , pp. 1356-1370
    • Temme, C.1    Zhang, L.2    Kremmer, E.3    Ihling, C.4    Chartier, A.5
  • 11
    • 84874586399 scopus 로고    scopus 로고
    • NOT10 and C2orf29/NOT11 form a conserved module of the CCR4-NOT complex that docks onto the NOT1 N-terminal domain
    • Bawankar P, Loh B, Wohlbold L, Schmidt S, Izaurralde E, (2013) NOT10 and C2orf29/NOT11 form a conserved module of the CCR4-NOT complex that docks onto the NOT1 N-terminal domain. RNA biology 10
    • (2013) RNA biology 10
    • Bawankar, P.1    Loh, B.2    Wohlbold, L.3    Schmidt, S.4    Izaurralde, E.5
  • 12
    • 84874594044 scopus 로고    scopus 로고
    • C2ORF29/CNOT11 and CNOT10 form a new module of the CCR4-NOT complex
    • Mauxion F, Preve B, Seraphin B, (2012) C2ORF29/CNOT11 and CNOT10 form a new module of the CCR4-NOT complex. RNA biology 10
    • (2012) RNA biology 10
    • Mauxion, F.1    Preve, B.2    Seraphin, B.3
  • 13
    • 84875442713 scopus 로고    scopus 로고
    • Trypanosome CNOT10 is essential for the integrity of the NOT deadenylase complex and for degradation of many mRNAs
    • Farber V, Erben E, Sharma S, Stoecklin G, Clayton C, (2013) Trypanosome CNOT10 is essential for the integrity of the NOT deadenylase complex and for degradation of many mRNAs. Nucleic acids research 41: 1211–1222.
    • (2013) Nucleic acids research , vol.41 , pp. 1211-1222
    • Farber, V.1    Erben, E.2    Sharma, S.3    Stoecklin, G.4    Clayton, C.5
  • 14
    • 0036785497 scopus 로고    scopus 로고
    • The Ccr4-not complex and yTAF1 (yTaf(II)130p/yTaf(II)145p) show physical and functional interactions
    • Deluen C, James N, Maillet L, Molinete M, Theiler G, et al. (2002) The Ccr4-not complex and yTAF1 (yTaf(II)130p/yTaf(II)145p) show physical and functional interactions. Molecular and cellular biology 22: 6735–6749.
    • (2002) Molecular and cellular biology , vol.22 , pp. 6735-6749
    • Deluen, C.1    James, N.2    Maillet, L.3    Molinete, M.4    Theiler, G.5
  • 15
  • 16
    • 79951493843 scopus 로고    scopus 로고
    • A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces
    • Venters BJ, Wachi S, Mavrich TN, Andersen BE, Jena P, et al. (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Molecular cell 41: 480–492.
    • (2011) Molecular cell , vol.41 , pp. 480-492
    • Venters, B.J.1    Wachi, S.2    Mavrich, T.N.3    Andersen, B.E.4    Jena, P.5
  • 17
    • 79952609007 scopus 로고    scopus 로고
    • The multifunctional Ccr4-Not complex directly promotes transcription elongation
    • Kruk JA, Dutta A, Fu J, Gilmour DS, Reese JC, (2011) The multifunctional Ccr4-Not complex directly promotes transcription elongation. Genes & development 25: 581–593.
    • (2011) Genes & development , vol.25 , pp. 581-593
    • Kruk, J.A.1    Dutta, A.2    Fu, J.3    Gilmour, D.S.4    Reese, J.C.5
  • 18
    • 19944399062 scopus 로고    scopus 로고
    • The Ccr4-Not complex independently controls both Msn2-dependent transcriptional activation—via a newly identified Glc7/Bud14 type I protein phosphatase module—and TFIID promoter distribution
    • Lenssen E, James N, Pedruzzi I, Dubouloz F, Cameroni E, et al. (2005) The Ccr4-Not complex independently controls both Msn2-dependent transcriptional activation—via a newly identified Glc7/Bud14 type I protein phosphatase module—and TFIID promoter distribution. Molecular and cellular biology 25: 488–498.
    • (2005) Molecular and cellular biology , vol.25 , pp. 488-498
    • Lenssen, E.1    James, N.2    Pedruzzi, I.3    Dubouloz, F.4    Cameroni, E.5
  • 19
    • 0035830508 scopus 로고    scopus 로고
    • The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae
    • Tucker M, Valencia-Sanchez MA, Staples RR, Chen J, Denis CL, et al. (2001) The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae. Cell 104: 377–386.
    • (2001) Cell , vol.104 , pp. 377-386
    • Tucker, M.1    Valencia-Sanchez, M.A.2    Staples, R.R.3    Chen, J.4    Denis, C.L.5
  • 20
    • 84877801967 scopus 로고    scopus 로고
    • RNA decay machines: Deadenylation by the Ccr4-Not and Pan2-Pan3 complexes
    • Wahle E, Winkler GS, (2013) RNA decay machines: Deadenylation by the Ccr4-Not and Pan2-Pan3 complexes. Biochimica et biophysica acta 1829: 561–570.
    • (2013) Biochimica et biophysica acta , vol.1829 , pp. 561-570
    • Wahle, E.1    Winkler, G.S.2
  • 21
    • 84856026751 scopus 로고    scopus 로고
    • Presence of Not5 and ubiquitinated Rps7A in polysome fractions depends upon the Not4 E3 ligase
    • Panasenko OO, Collart MA, (2012) Presence of Not5 and ubiquitinated Rps7A in polysome fractions depends upon the Not4 E3 ligase. Molecular microbiology 83: 640–653.
    • (2012) Molecular microbiology , vol.83 , pp. 640-653
    • Panasenko, O.O.1    Collart, M.A.2
  • 22
    • 66849136862 scopus 로고    scopus 로고
    • Nascent peptide-dependent translation arrest leads to Not4p-mediated protein degradation by the proteasome
    • Dimitrova LN, Kuroha K, Tatematsu T, Inada T, (2009) Nascent peptide-dependent translation arrest leads to Not4p-mediated protein degradation by the proteasome. The Journal of biological chemistry 284: 10343–10352.
    • (2009) The Journal of biological chemistry , vol.284 , pp. 10343-10352
    • Dimitrova, L.N.1    Kuroha, K.2    Tatematsu, T.3    Inada, T.4
  • 23
    • 84898429935 scopus 로고    scopus 로고
    • The Not4 E3 ligase and CCR4 deadenylase play distinct roles in protein quality control
    • Halter D, Collart MA, Panasenko OO, (2014) The Not4 E3 ligase and CCR4 deadenylase play distinct roles in protein quality control. PloS one 9: e86218.
    • (2014) PloS one , vol.9 , pp. e86218
    • Halter, D.1    Collart, M.A.2    Panasenko, O.O.3
  • 24
    • 79953150421 scopus 로고    scopus 로고
    • Not4 E3 ligase contributes to proteasome assembly and functional integrity in part through Ecm29
    • Panasenko OO, Collart MA, (2011) Not4 E3 ligase contributes to proteasome assembly and functional integrity in part through Ecm29. Molecular and cellular biology 31: 1610–1623.
    • (2011) Molecular and cellular biology , vol.31 , pp. 1610-1623
    • Panasenko, O.O.1    Collart, M.A.2
  • 25
    • 79960903971 scopus 로고    scopus 로고
    • Coupled evolution of transcription and mRNA degradation
    • Dori-Bachash M, Shema E, Tirosh I, (2011) Coupled evolution of transcription and mRNA degradation. PLoS biology 9: e1001106.
    • (2011) PLoS biology , vol.9 , pp. e1001106
    • Dori-Bachash, M.1    Shema, E.2    Tirosh, I.3
  • 27
    • 84858006492 scopus 로고    scopus 로고
    • Biogenesis of multisubunit RNA polymerases
    • Wild T, Cramer P, (2012) Biogenesis of multisubunit RNA polymerases. Trends in biochemical sciences 37: 99–105.
    • (2012) Trends in biochemical sciences , vol.37 , pp. 99-105
    • Wild, T.1    Cramer, P.2
  • 28
    • 77956898581 scopus 로고    scopus 로고
    • HSP90 and its R2TP/Prefoldin-like cochaperone are involved in the cytoplasmic assembly of RNA polymerase II
    • Boulon S, Pradet-Balade B, Verheggen C, Molle D, Boireau S, et al. (2010) HSP90 and its R2TP/Prefoldin-like cochaperone are involved in the cytoplasmic assembly of RNA polymerase II. Molecular cell 39: 912–924.
    • (2010) Molecular cell , vol.39 , pp. 912-924
    • Boulon, S.1    Pradet-Balade, B.2    Verheggen, C.3    Molle, D.4    Boireau, S.5
  • 29
    • 84858210854 scopus 로고    scopus 로고
    • HSP90 and the R2TP co-chaperone complex: building multi-protein machineries essential for cell growth and gene expression
    • Boulon S, Bertrand E, Pradet-Balade B, (2012) HSP90 and the R2TP co-chaperone complex: building multi-protein machineries essential for cell growth and gene expression. RNA biology 9: 148–154.
    • (2012) RNA biology , vol.9 , pp. 148-154
    • Boulon, S.1    Bertrand, E.2    Pradet-Balade, B.3
  • 33
    • 78650077626 scopus 로고    scopus 로고
    • The protein interaction network of the human transcription machinery reveals a role for the conserved GTPase RPAP4/GPN1 and microtubule assembly in nuclear import and biogenesis of RNA polymerase II
    • Forget D, Lacombe AA, Cloutier P, Al-Khoury R, Bouchard A, et al. (2010) The protein interaction network of the human transcription machinery reveals a role for the conserved GTPase RPAP4/GPN1 and microtubule assembly in nuclear import and biogenesis of RNA polymerase II. Molecular & cellular proteomics: MCP 9: 2827–2839.
    • (2010) Molecular & cellular proteomics: MCP , vol.9 , pp. 2827-2839
    • Forget, D.1    Lacombe, A.A.2    Cloutier, P.3    Al-Khoury, R.4    Bouchard, A.5
  • 35
    • 29144508551 scopus 로고    scopus 로고
    • The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs
    • Lotan R, Bar-On VG, Harel-Sharvit L, Duek L, Melamed D, et al. (2005) The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs. Genes & development 19: 3004–3016.
    • (2005) Genes & development , vol.19 , pp. 3004-3016
    • Lotan, R.1    Bar-On, V.G.2    Harel-Sharvit, L.3    Duek, L.4    Melamed, D.5
  • 36
    • 33845604554 scopus 로고    scopus 로고
    • Nucleocytoplasmic shuttling of the Rpb4p and Rpb7p subunits of Saccharomyces cerevisiae RNA polymerase II by two pathways
    • Selitrennik M, Duek L, Lotan R, Choder M, (2006) Nucleocytoplasmic shuttling of the Rpb4p and Rpb7p subunits of Saccharomyces cerevisiae RNA polymerase II by two pathways. Eukaryotic cell 5: 2092–2103.
    • (2006) Eukaryotic cell , vol.5 , pp. 2092-2103
    • Selitrennik, M.1    Duek, L.2    Lotan, R.3    Choder, M.4
  • 37
    • 84872388407 scopus 로고    scopus 로고
    • The eukaryotic transcriptional machinery regulates mRNA translation and decay in the cytoplasm
    • Dahan N, Choder M, (2013) The eukaryotic transcriptional machinery regulates mRNA translation and decay in the cytoplasm. Biochimica et biophysica acta 1829: 169–173.
    • (2013) Biochimica et biophysica acta , vol.1829 , pp. 169-173
    • Dahan, N.1    Choder, M.2
  • 38
    • 84855261941 scopus 로고    scopus 로고
    • Widespread cotranslational formation of protein complexes
    • Duncan CD, Mata J, (2011) Widespread cotranslational formation of protein complexes. PLoS genetics 7: e1002398.
    • (2011) PLoS genetics , vol.7 , pp. e1002398
    • Duncan, C.D.1    Mata, J.2
  • 39
    • 84908352023 scopus 로고    scopus 로고
    • The Not3/5 subunit of the Ccr4-Not complex: A central regulator of gene expression that integrates signals between the cytoplasm and the nucleus in eukaryotic cells
    • Collart M, Panasenko O, Nikolaev S, (2012) The Not3/5 subunit of the Ccr4-Not complex: A central regulator of gene expression that integrates signals between the cytoplasm and the nucleus in eukaryotic cells. Cellular signalling
    • (2012) Cellular signalling
    • Collart, M.1    Panasenko, O.2    Nikolaev, S.3
  • 42
    • 34748850800 scopus 로고    scopus 로고
    • The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms
    • Lotan R, Goler-Baron V, Duek L, Haimovich G, Choder M, (2007) The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms. The Journal of cell biology 178: 1133–1143.
    • (2007) The Journal of cell biology , vol.178 , pp. 1133-1143
    • Lotan, R.1    Goler-Baron, V.2    Duek, L.3    Haimovich, G.4    Choder, M.5
  • 43
    • 34347341691 scopus 로고    scopus 로고
    • Yeast Rpb9 plays an important role in ubiquitylation and degradation of Rpb1 in response to UV-induced DNA damage
    • Chen X, Ruggiero C, Li S, (2007) Yeast Rpb9 plays an important role in ubiquitylation and degradation of Rpb1 in response to UV-induced DNA damage. Molecular and cellular biology 27: 4617–4625.
    • (2007) Molecular and cellular biology , vol.27 , pp. 4617-4625
    • Chen, X.1    Ruggiero, C.2    Li, S.3
  • 44
    • 60849094787 scopus 로고    scopus 로고
    • Specific roles for the Ccr4-Not complex subunits in expression of the genome
    • Azzouz N, Panasenko OO, Deluen C, Hsieh J, Theiler G, et al. (2009) Specific roles for the Ccr4-Not complex subunits in expression of the genome. RNA 15: 377–383.
    • (2009) RNA , vol.15 , pp. 377-383
    • Azzouz, N.1    Panasenko, O.O.2    Deluen, C.3    Hsieh, J.4    Theiler, G.5
  • 45
    • 84872398471 scopus 로고    scopus 로고
    • The control of elongation by the yeast Ccr4-not complex
    • Reese JC, (2013) The control of elongation by the yeast Ccr4-not complex. Biochimica et biophysica acta 1829: 127–133.
    • (2013) Biochimica et biophysica acta , vol.1829 , pp. 127-133
    • Reese, J.C.1
  • 46
    • 0032545665 scopus 로고    scopus 로고
    • Characterization of NOT5 that encodes a new component of the Not protein complex
    • Oberholzer U, Collart MA, (1998) Characterization of NOT5 that encodes a new component of the Not protein complex. Gene 207: 61–69.
    • (1998) Gene , vol.207 , pp. 61-69
    • Oberholzer, U.1    Collart, M.A.2
  • 47
    • 0024396228 scopus 로고
    • RNA polymerase II subunit RPB4 is essential for high- and low-temperature yeast cell growth
    • Woychik NA, Young RA, (1989) RNA polymerase II subunit RPB4 is essential for high- and low-temperature yeast cell growth. Molecular and cellular biology 9: 2854–2859.
    • (1989) Molecular and cellular biology , vol.9 , pp. 2854-2859
    • Woychik, N.A.1    Young, R.A.2
  • 48
    • 8544251268 scopus 로고    scopus 로고
    • Rpb4 and Rpb7: subunits of RNA polymerase II and beyond
    • Choder M, (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends in biochemical sciences 29: 674–681.
    • (2004) Trends in biochemical sciences , vol.29 , pp. 674-681
    • Choder, M.1
  • 49
    • 18244371928 scopus 로고    scopus 로고
    • Rpb4 and Rpb7: a sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions
    • Sampath V, Sadhale P, (2005) Rpb4 and Rpb7: a sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions. IUBMB life 57: 93–102.
    • (2005) IUBMB life , vol.57 , pp. 93-102
    • Sampath, V.1    Sadhale, P.2
  • 50
    • 84908317412 scopus 로고    scopus 로고
    • The NOT4 RING E3 ligase: a relevant player in co-translational quality control
    • Collart MA, (2013) The NOT4 RING E3 ligase: a relevant player in co-translational quality control. ISRN Molecular Biology 2013: 548359.
    • (2013) ISRN Molecular Biology , vol.2013 , pp. 548359
    • Collart, M.A.1
  • 53
    • 33846008044 scopus 로고    scopus 로고
    • The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex
    • Panasenko O, Landrieux E, Feuermann M, Finka A, Paquet N, et al. (2006) The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex. The Journal of biological chemistry 281: 31389–31398.
    • (2006) The Journal of biological chemistry , vol.281 , pp. 31389-31398
    • Panasenko, O.1    Landrieux, E.2    Feuermann, M.3    Finka, A.4    Paquet, N.5
  • 54
    • 0028268566 scopus 로고
    • NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization
    • Collart MA, Struhl K, (1994) NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization. Genes & development 8: 525–537.
    • (1994) Genes & development , vol.8 , pp. 525-537
    • Collart, M.A.1    Struhl, K.2
  • 55
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl MW, (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic acids research 29: e45.
    • (2001) Nucleic acids research , vol.29 , pp. e45
    • Pfaffl, M.W.1


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