-
1
-
-
0025739871
-
RNA polymerase II
-
Young R.A. RNA polymerase II. Annu. Rev. Biochem. 1991, 60:689-715.
-
(1991)
Annu. Rev. Biochem.
, vol.60
, pp. 689-715
-
-
Young, R.A.1
-
2
-
-
14844290215
-
Structures of complete RNA polymerase II and its subcomplex, Rpb4/7
-
Armache K.J., Mitterweger S., Meinhart A., Cramer P. Structures of complete RNA polymerase II and its subcomplex, Rpb4/7. J. Biol. Chem. 2005, 280:7131-7134.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 7131-7134
-
-
Armache, K.J.1
Mitterweger, S.2
Meinhart, A.3
Cramer, P.4
-
3
-
-
1942535198
-
RNA polymerase II structure: from core to functional complexes
-
Cramer P. RNA polymerase II structure: from core to functional complexes. Curr. Opin. Genet. Dev. 2004, 14:218-226.
-
(2004)
Curr. Opin. Genet. Dev.
, vol.14
, pp. 218-226
-
-
Cramer, P.1
-
4
-
-
34548801789
-
The molecular basis of eukaryotic transcription
-
Kornberg R.D. The molecular basis of eukaryotic transcription. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:12955-12961.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 12955-12961
-
-
Kornberg, R.D.1
-
5
-
-
0035971082
-
Dissociable Rpb4-Rpb7 subassembly of RNA polymerase II binds to single-strand nucleic acid and mediates a post-recruitment step in transcription initiation
-
Orlicky S.M., Tran P.T., Sayre M.H., Edwards A.M. Dissociable Rpb4-Rpb7 subassembly of RNA polymerase II binds to single-strand nucleic acid and mediates a post-recruitment step in transcription initiation. J. Biol. Chem. 2001, 276:10097-10102.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 10097-10102
-
-
Orlicky, S.M.1
Tran, P.T.2
Sayre, M.H.3
Edwards, A.M.4
-
6
-
-
8544251268
-
Rpb4 and Rpb7: subunits of RNA polymerase II and beyond
-
Choder M. Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem. Sci. 2004, 29:674-681.
-
(2004)
Trends Biochem. Sci.
, vol.29
, pp. 674-681
-
-
Choder, M.1
-
7
-
-
0037832543
-
Complete, 12-subunit RNA polymerase II at 4.1-A resolution: implications for the initiation of transcription
-
Bushnell D.A., Kornberg R.D. Complete, 12-subunit RNA polymerase II at 4.1-A resolution: implications for the initiation of transcription. Proc. Natl. Acad. Sci. U. S. A. 2003, 100:6969-6973.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 6969-6973
-
-
Bushnell, D.A.1
Kornberg, R.D.2
-
8
-
-
0034607658
-
Zinc stoichiometry of yeast RNA polymerase II and characterization of mutations in the zinc-binding domain of the largest subunit
-
Donaldson I.M., Friesen J.D. Zinc stoichiometry of yeast RNA polymerase II and characterization of mutations in the zinc-binding domain of the largest subunit. J. Biol. Chem. 2000, 275:13780-13788.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 13780-13788
-
-
Donaldson, I.M.1
Friesen, J.D.2
-
9
-
-
0037405790
-
Loss of the Rpb4/Rpb7 subcomplex in a mutant form of the Rpb6 subunit shared by RNA polymerases I, II, and III
-
Tan Q., Prysak M.H., Woychik N.A. Loss of the Rpb4/Rpb7 subcomplex in a mutant form of the Rpb6 subunit shared by RNA polymerases I, II, and III. Mol. Cell. Biol. 2003, 23:3329-3338.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 3329-3338
-
-
Tan, Q.1
Prysak, M.H.2
Woychik, N.A.3
-
10
-
-
0031785748
-
Rpb4, a subunit of RNA polymerase II, enables the enzyme to transcribe at temperature extremes in vitro
-
Rosenheck S., Choder M. Rpb4, a subunit of RNA polymerase II, enables the enzyme to transcribe at temperature extremes in vitro. J. Bacteriol. 1998, 180:6187-6192.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 6187-6192
-
-
Rosenheck, S.1
Choder, M.2
-
11
-
-
0038107498
-
Rpb4p, a subunit of RNA polymerase II, mediates mRNA export during stress
-
Farago M., Nahari T., Hammel C., Cole C.N., Choder M. Rpb4p, a subunit of RNA polymerase II, mediates mRNA export during stress. Mol. Biol. Cell. 2003, 14:2744-2755.
-
(2003)
Mol. Biol. Cell.
, vol.14
, pp. 2744-2755
-
-
Farago, M.1
Nahari, T.2
Hammel, C.3
Cole, C.N.4
Choder, M.5
-
12
-
-
78149478886
-
RNA polymerase II subunits link transcription and mRNA decay to translation
-
Harel-Sharvit L., Eldad N., Haimovich G., Barkai O., Duek L., Choder M. RNA polymerase II subunits link transcription and mRNA decay to translation. Cell 2010, 143:552-563.
-
(2010)
Cell
, vol.143
, pp. 552-563
-
-
Harel-Sharvit, L.1
Eldad, N.2
Haimovich, G.3
Barkai, O.4
Duek, L.5
Choder, M.6
-
13
-
-
48749090496
-
Transcription in the nucleus and mRNA decay in the cytoplasm are coupled processes
-
Goler-Baron V., Selitrennik M., Barkai O., Haimovich G., Lotan R., Choder M. Transcription in the nucleus and mRNA decay in the cytoplasm are coupled processes. Genes Dev. 2008, 22:2022-2027.
-
(2008)
Genes Dev.
, vol.22
, pp. 2022-2027
-
-
Goler-Baron, V.1
Selitrennik, M.2
Barkai, O.3
Haimovich, G.4
Lotan, R.5
Choder, M.6
-
14
-
-
29144508551
-
The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs
-
Lotan R., Bar-On V.G., Harel-Sharvit L., Duek L., Melamed D., Choder M. The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs. Genes Dev. 2005, 19:3004-3016.
-
(2005)
Genes Dev.
, vol.19
, pp. 3004-3016
-
-
Lotan, R.1
Bar-On, V.G.2
Harel-Sharvit, L.3
Duek, L.4
Melamed, D.5
Choder, M.6
-
15
-
-
34748850800
-
The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms
-
Lotan R., Goler-Baron V., Duek L., Haimovich G., Choder M. The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms. J. Cell Biol. 2007, 178:1133-1143.
-
(2007)
J. Cell Biol.
, vol.178
, pp. 1133-1143
-
-
Lotan, R.1
Goler-Baron, V.2
Duek, L.3
Haimovich, G.4
Choder, M.5
-
16
-
-
38349173560
-
Single-molecule tracking of mRNA exiting from RNA polymerase II
-
Andrecka J., Lewis R., Bruckner F., Lehmann E., Cramer P., Michaelis J. Single-molecule tracking of mRNA exiting from RNA polymerase II. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:135-140.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 135-140
-
-
Andrecka, J.1
Lewis, R.2
Bruckner, F.3
Lehmann, E.4
Cramer, P.5
Michaelis, J.6
-
17
-
-
0035827332
-
Structural basis of transcription: an RNA polymerase II elongation complex at 3.3A resolution
-
Gnatt A.L., Cramer P., Fu J., Bushnell D.A., Kornberg R.D. Structural basis of transcription: an RNA polymerase II elongation complex at 3.3A resolution. Science 2001, 292:1876-1882.
-
(2001)
Science
, vol.292
, pp. 1876-1882
-
-
Gnatt, A.L.1
Cramer, P.2
Fu, J.3
Bushnell, D.A.4
Kornberg, R.D.5
-
18
-
-
1142310578
-
Structural basis of transcription: separation of RNA from DNA by RNA polymerase II
-
Westover K.D., Bushnell D.A., Kornberg R.D. Structural basis of transcription: separation of RNA from DNA by RNA polymerase II. Science 2004, 303:1014-1016.
-
(2004)
Science
, vol.303
, pp. 1014-1016
-
-
Westover, K.D.1
Bushnell, D.A.2
Kornberg, R.D.3
-
19
-
-
0034724953
-
Architecture of RNA polymerase II and implications for the transcription mechanism
-
Cramer P., Bushnell D.A., Fu J., Gnatt A.L., Maier-Davis B., Thompson N.E., Burgess R.R., Edwards A.M., David P.R., Kornberg R.D. Architecture of RNA polymerase II and implications for the transcription mechanism. Science 2000, 288:640-649.
-
(2000)
Science
, vol.288
, pp. 640-649
-
-
Cramer, P.1
Bushnell, D.A.2
Fu, J.3
Gnatt, A.L.4
Maier-Davis, B.5
Thompson, N.E.6
Burgess, R.R.7
Edwards, A.M.8
David, P.R.9
Kornberg, R.D.10
-
20
-
-
0035827346
-
Structural basis of transcription: RNA polymerase II at 2.8Angstrom resolution
-
Cramer P., Bushnell D.A., Kornberg R.D. Structural basis of transcription: RNA polymerase II at 2.8Angstrom resolution. Science 2001, 292:1863-1876.
-
(2001)
Science
, vol.292
, pp. 1863-1876
-
-
Cramer, P.1
Bushnell, D.A.2
Kornberg, R.D.3
-
21
-
-
0036690340
-
Structure of yeast RNA polymerase II in solution: implications for enzyme regulation and interaction with promoter DNA
-
Craighead J.L., Chang W.H., Asturias F.J. Structure of yeast RNA polymerase II in solution: implications for enzyme regulation and interaction with promoter DNA. Structure 2002, 10:1117-1125.
-
(2002)
Structure
, vol.10
, pp. 1117-1125
-
-
Craighead, J.L.1
Chang, W.H.2
Asturias, F.J.3
-
22
-
-
0035930324
-
Structure of an archaeal homolog of the eukaryotic RNA polymerase II RPB4/RPB7 complex
-
Todone F., Brick P., Werner F., Weinzierl R.O., Onesti S. Structure of an archaeal homolog of the eukaryotic RNA polymerase II RPB4/RPB7 complex. Mol. Cell 2001, 8:1137-1143.
-
(2001)
Mol. Cell
, vol.8
, pp. 1137-1143
-
-
Todone, F.1
Brick, P.2
Werner, F.3
Weinzierl, R.O.4
Onesti, S.5
-
23
-
-
33745839780
-
Structural, biochemical, and dynamic characterizations of the hRPB8 subunit of human RNA polymerases
-
Kang X., Hu Y., Li Y., Guo X., Jiang X., Lai L., Xia B., Jin C. Structural, biochemical, and dynamic characterizations of the hRPB8 subunit of human RNA polymerases. J. Biol. Chem. 2006, 281:18216-18226.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 18216-18226
-
-
Kang, X.1
Hu, Y.2
Li, Y.3
Guo, X.4
Jiang, X.5
Lai, L.6
Xia, B.7
Jin, C.8
-
24
-
-
0031886545
-
Eukaryotic RNA polymerase subunit RPB8 is a new relative of the OB family
-
Krapp S., Kelly G., Reischl J., Weinzierl R.O., Matthews S. Eukaryotic RNA polymerase subunit RPB8 is a new relative of the OB family. Nat. Struct. Biol. 1998, 5:110-114.
-
(1998)
Nat. Struct. Biol.
, vol.5
, pp. 110-114
-
-
Krapp, S.1
Kelly, G.2
Reischl, J.3
Weinzierl, R.O.4
Matthews, S.5
-
25
-
-
30044431985
-
RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit
-
Ujvari A., Luse D.S. RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit. Nat. Struct. Mol. Biol. 2006, 13:49-54.
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 49-54
-
-
Ujvari, A.1
Luse, D.S.2
-
26
-
-
58549106435
-
Mapping RNA exit channel on transcribing RNA polymerase II by FRET analysis
-
Chen C.Y., Chang C.C., Yen C.F., Chiu M.T., Chang W.H. Mapping RNA exit channel on transcribing RNA polymerase II by FRET analysis. Proc. Natl. Acad. Sci. U. S. A. 2009, 106:127-132.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 127-132
-
-
Chen, C.Y.1
Chang, C.C.2
Yen, C.F.3
Chiu, M.T.4
Chang, W.H.5
-
27
-
-
19344378943
-
Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors
-
Bentley D.L. Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors. Curr. Opin. Cell Biol. 2005, 17:251-256.
-
(2005)
Curr. Opin. Cell Biol.
, vol.17
, pp. 251-256
-
-
Bentley, D.L.1
-
28
-
-
60149110358
-
Pre-mRNA processing reaches back to transcription and ahead to translation
-
Moore M.J., Proudfoot N.J. Pre-mRNA processing reaches back to transcription and ahead to translation. Cell 2009, 136:688-700.
-
(2009)
Cell
, vol.136
, pp. 688-700
-
-
Moore, M.J.1
Proudfoot, N.J.2
-
29
-
-
0037154967
-
Integrating mRNA processing with transcription
-
Proudfoot N.J., Furger A., Dye M.J. Integrating mRNA processing with transcription. Cell 2002, 108:501-512.
-
(2002)
Cell
, vol.108
, pp. 501-512
-
-
Proudfoot, N.J.1
Furger, A.2
Dye, M.J.3
-
30
-
-
0025962218
-
Two dissociable subunits of yeast RNA polymerase II stimulate the initiation of transcription at a promoter in vitro
-
Edwards A.M., Kane C.M., Young R.A., Kornberg R.D. Two dissociable subunits of yeast RNA polymerase II stimulate the initiation of transcription at a promoter in vitro. J. Biol. Chem. 1991, 266:71-75.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 71-75
-
-
Edwards, A.M.1
Kane, C.M.2
Young, R.A.3
Kornberg, R.D.4
-
31
-
-
34249652975
-
The RPB7 orthologue E' is required for transcriptional activity of a reconstituted archaeal core enzyme at low temperatures and stimulates open complex formation
-
Naji S., Grunberg S., Thomm M. The RPB7 orthologue E' is required for transcriptional activity of a reconstituted archaeal core enzyme at low temperatures and stimulates open complex formation. J. Biol. Chem. 2007, 282:11047-11057.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 11047-11057
-
-
Naji, S.1
Grunberg, S.2
Thomm, M.3
-
32
-
-
10644284660
-
A fully recombinant system for activator-dependent archaeal transcription
-
Ouhammouch M., Werner F., Weinzierl R.O., Geiduschek E.P. A fully recombinant system for activator-dependent archaeal transcription. J. Biol. Chem. 2004, 279:51719-51721.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 51719-51721
-
-
Ouhammouch, M.1
Werner, F.2
Weinzierl, R.O.3
Geiduschek, E.P.4
-
33
-
-
0027379051
-
A portion of RNA polymerase II molecules has a component essential for stress responses and stress survival
-
Choder M., Young R.A. A portion of RNA polymerase II molecules has a component essential for stress responses and stress survival. Mol. Cell. Biol. 1993, 13:6984-6991.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 6984-6991
-
-
Choder, M.1
Young, R.A.2
-
34
-
-
0033529595
-
Rpb4p is necessary for RNA polymerase II activity at high temperature
-
Maillet I., Buhler J.M., Sentenac A., Labarre J. Rpb4p is necessary for RNA polymerase II activity at high temperature. J. Biol. Chem. 1999, 274:22586-22590.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 22586-22590
-
-
Maillet, I.1
Buhler, J.M.2
Sentenac, A.3
Labarre, J.4
-
35
-
-
0035824661
-
Deletion of the RNA polymerase subunit RPB4 acts as a global, not stress-specific, shut-off switch for RNA polymerase II transcription at high temperatures
-
Miyao T., Barnett J.D., Woychik N.A. Deletion of the RNA polymerase subunit RPB4 acts as a global, not stress-specific, shut-off switch for RNA polymerase II transcription at high temperatures. J. Biol. Chem. 2001, 276:46408-46413.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 46408-46413
-
-
Miyao, T.1
Barnett, J.D.2
Woychik, N.A.3
-
36
-
-
0035903138
-
Rpb4, a non-essential subunit of core RNA polymerase II of Saccharomyces cerevisiae is important for activated transcription of a subset of genes
-
Pillai B., Sampath V., Sharma N., Sadhale P. Rpb4, a non-essential subunit of core RNA polymerase II of Saccharomyces cerevisiae is important for activated transcription of a subset of genes. J. Biol. Chem. 2001, 276:30641-30647.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 30641-30647
-
-
Pillai, B.1
Sampath, V.2
Sharma, N.3
Sadhale, P.4
-
37
-
-
0032963268
-
Rpb7 can interact with RNA polymerase II and support transcription during some stresses independently of Rpb4
-
Sheffer A., Varon M., Choder M. Rpb7 can interact with RNA polymerase II and support transcription during some stresses independently of Rpb4. Mol. Cell. Biol. 1999, 19:2672-2680.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 2672-2680
-
-
Sheffer, A.1
Varon, M.2
Choder, M.3
-
38
-
-
55549121958
-
Genome-associated RNA polymerase II includes the dissociable Rpb4/7 subcomplex
-
Jasiak A.J., Hartmann H., Karakasili E., Kalocsay M., Flatley A., Kremmer E., Strasser K., Martin D.E., Soding J., Cramer P. Genome-associated RNA polymerase II includes the dissociable Rpb4/7 subcomplex. J. Biol. Chem. 2008, 283:26423-26427.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 26423-26427
-
-
Jasiak, A.J.1
Hartmann, H.2
Karakasili, E.3
Kalocsay, M.4
Flatley, A.5
Kremmer, E.6
Strasser, K.7
Martin, D.E.8
Soding, J.9
Cramer, P.10
-
39
-
-
46949084537
-
Genomewide recruitment analysis of Rpb4, a subunit of polymerase II in Saccharomyces cerevisiae, reveals its involvement in transcription elongation
-
Verma-Gaur J., Rao S.N., Taya T., Sadhale P. Genomewide recruitment analysis of Rpb4, a subunit of polymerase II in Saccharomyces cerevisiae, reveals its involvement in transcription elongation. Eukaryot. Cell 2008, 7:1009-1018.
-
(2008)
Eukaryot. Cell
, vol.7
, pp. 1009-1018
-
-
Verma-Gaur, J.1
Rao, S.N.2
Taya, T.3
Sadhale, P.4
-
40
-
-
40349114502
-
The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors
-
Runner V.M., Podolny V., Buratowski S. The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors. Mol. Cell. Biol. 2008, 28:1883-1891.
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 1883-1891
-
-
Runner, V.M.1
Podolny, V.2
Buratowski, S.3
-
41
-
-
77449091060
-
Molecular mechanisms of RNA polymerase-the F/E (RPB4/7) complex is required for high processivity in vitro
-
Hirtreiter A., Grohmann D., Werner F. Molecular mechanisms of RNA polymerase-the F/E (RPB4/7) complex is required for high processivity in vitro. Nucleic Acids Res. 2010, 38:585-596.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 585-596
-
-
Hirtreiter, A.1
Grohmann, D.2
Werner, F.3
-
42
-
-
33847771442
-
The highways and byways of mRNA decay. Nature reviews
-
Garneau N.L., Wilusz J., Wilusz C.J. The highways and byways of mRNA decay. Nature reviews. Mol. Cell Biol. 2007, 8:113-126.
-
(2007)
Mol. Cell Biol.
, vol.8
, pp. 113-126
-
-
Garneau, N.L.1
Wilusz, J.2
Wilusz, C.J.3
-
43
-
-
33847417585
-
P bodies and the control of mRNA translation and degradation
-
Parker R., Sheth U. P bodies and the control of mRNA translation and degradation. Mol. Cell 2007, 25:635-646.
-
(2007)
Mol. Cell
, vol.25
, pp. 635-646
-
-
Parker, R.1
Sheth, U.2
-
44
-
-
33845604554
-
Nucleocytoplasmic shuttling of the Rpb4p and Rpb7p subunits of Saccharomyces cerevisiae RNA polymerase II by two pathways
-
Selitrennik M., Duek L., Lotan R., Choder M. Nucleocytoplasmic shuttling of the Rpb4p and Rpb7p subunits of Saccharomyces cerevisiae RNA polymerase II by two pathways. Eukaryot. Cell 2006, 5:2092-2103.
-
(2006)
Eukaryot. Cell
, vol.5
, pp. 2092-2103
-
-
Selitrennik, M.1
Duek, L.2
Lotan, R.3
Choder, M.4
-
45
-
-
80053453977
-
MRNA imprinting: additional level in the regulation of gene expression
-
Choder M. mRNA imprinting: additional level in the regulation of gene expression. Cell. Logist. 2011, 1:37-40.
-
(2011)
Cell. Logist.
, vol.1
, pp. 37-40
-
-
Choder, M.1
-
46
-
-
65249131779
-
Nuclear shuttling of She2p couples ASH1 mRNA localization to its translational repression by recruiting Loc1p and Puf6p
-
Shen Z., Paquin N., Forget A., Chartrand P. Nuclear shuttling of She2p couples ASH1 mRNA localization to its translational repression by recruiting Loc1p and Puf6p. Mol. Biol. Cell. 2009, 20:2265-2275.
-
(2009)
Mol. Biol. Cell.
, vol.20
, pp. 2265-2275
-
-
Shen, Z.1
Paquin, N.2
Forget, A.3
Chartrand, P.4
-
47
-
-
77956285483
-
Cotranscriptional recruitment of She2p by RNA pol II elongation factor Spt4-Spt5/DSIF promotes mRNA localization to the yeast bud
-
Shen Z., St-Denis A., Chartrand P. Cotranscriptional recruitment of She2p by RNA pol II elongation factor Spt4-Spt5/DSIF promotes mRNA localization to the yeast bud. Genes Dev. 2010, 24:1914-1926.
-
(2010)
Genes Dev.
, vol.24
, pp. 1914-1926
-
-
Shen, Z.1
St-Denis, A.2
Chartrand, P.3
-
48
-
-
84455200588
-
Single-molecule mRNA decay measurements reveal promoter-regulated mRNA stability in yeast
-
Trcek T., Larson D.R., Moldon A., Query C.C., Singer R.H. Single-molecule mRNA decay measurements reveal promoter-regulated mRNA stability in yeast. Cell 2011, 147:1484-1497.
-
(2011)
Cell
, vol.147
, pp. 1484-1497
-
-
Trcek, T.1
Larson, D.R.2
Moldon, A.3
Query, C.C.4
Singer, R.H.5
-
49
-
-
2342439151
-
Splicing of oskar RNA in the nucleus is coupled to its cytoplasmic localization
-
Hachet O., Ephrussi A. Splicing of oskar RNA in the nucleus is coupled to its cytoplasmic localization. Nature 2004, 428:959-963.
-
(2004)
Nature
, vol.428
, pp. 959-963
-
-
Hachet, O.1
Ephrussi, A.2
-
50
-
-
79960744910
-
Nucleocytoplasmic shuttling of Ssd1 defines the destiny of its bound mRNAs
-
Kurischko C., Kuravi V.K., Herbert C.J., Luca F.C. Nucleocytoplasmic shuttling of Ssd1 defines the destiny of its bound mRNAs. Mol. Microbiol. 2011, 81:831-849.
-
(2011)
Mol. Microbiol.
, vol.81
, pp. 831-849
-
-
Kurischko, C.1
Kuravi, V.K.2
Herbert, C.J.3
Luca, F.C.4
-
51
-
-
0037314639
-
Real-time visualization of ZBP1 association with beta-actin mRNA during transcription and localization
-
Oleynikov Y., Singer R.H. Real-time visualization of ZBP1 association with beta-actin mRNA during transcription and localization. Curr. Biol. 2003, 13:199-207.
-
(2003)
Curr. Biol.
, vol.13
, pp. 199-207
-
-
Oleynikov, Y.1
Singer, R.H.2
-
52
-
-
13544262618
-
VICKZ proteins: a multi-talented family of regulatory RNA-binding proteins
-
Yisraeli J.K. VICKZ proteins: a multi-talented family of regulatory RNA-binding proteins. Biol. Cell 2005, 97:87-96.
-
(2005)
Biol. Cell
, vol.97
, pp. 87-96
-
-
Yisraeli, J.K.1
-
53
-
-
34648816826
-
Exporting RNA from the nucleus to the cytoplasm. Nature reviews
-
Kohler A., Hurt E. Exporting RNA from the nucleus to the cytoplasm. Nature reviews. Mol. Cell Biol. 2007, 8:761-773.
-
(2007)
Mol. Cell Biol.
, vol.8
, pp. 761-773
-
-
Kohler, A.1
Hurt, E.2
-
54
-
-
75149173478
-
The nuclear experience of CPEB: implications for RNA processing and translational control
-
Lin C.L., Evans V., Shen S., Xing Y., Richter J.D. The nuclear experience of CPEB: implications for RNA processing and translational control. RNA 2010, 16:338-348.
-
(2010)
RNA
, vol.16
, pp. 338-348
-
-
Lin, C.L.1
Evans, V.2
Shen, S.3
Xing, Y.4
Richter, J.D.5
-
55
-
-
8644283579
-
Yeast shuttling SR proteins Npl3p, Gbp2p, and Hrb1p are part of the translating mRNPs, and Npl3p can function as a translational repressor
-
Windgassen M., Sturm D., Cajigas I.J., Gonzalez C.I., Seedorf M., Bastians H., Krebber H. Yeast shuttling SR proteins Npl3p, Gbp2p, and Hrb1p are part of the translating mRNPs, and Npl3p can function as a translational repressor. Mol. Cell. Biol. 2004, 24:10479-10491.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 10479-10491
-
-
Windgassen, M.1
Sturm, D.2
Cajigas, I.J.3
Gonzalez, C.I.4
Seedorf, M.5
Bastians, H.6
Krebber, H.7
-
56
-
-
0032745787
-
Two yeast La motif-containing proteins are RNA-binding proteins that associate with polyribosomes
-
Sobel S.G., Wolin S.L. Two yeast La motif-containing proteins are RNA-binding proteins that associate with polyribosomes. Mol. Biol. Cell. 1999, 10:3849-3862.
-
(1999)
Mol. Biol. Cell.
, vol.10
, pp. 3849-3862
-
-
Sobel, S.G.1
Wolin, S.L.2
-
57
-
-
78751484964
-
Early recruitment of AU-rich element-containing mRNAs determines their cytosolic fate during iron deficiency
-
Vergara S.V., Puig S., Thiele D.J. Early recruitment of AU-rich element-containing mRNAs determines their cytosolic fate during iron deficiency. Mol. Cell. Biol. 2011, 31:417-429.
-
(2011)
Mol. Cell. Biol.
, vol.31
, pp. 417-429
-
-
Vergara, S.V.1
Puig, S.2
Thiele, D.J.3
-
58
-
-
77949429970
-
A novel link between Sus1 and the cytoplasmic mRNA decay machinery suggests a broad role in mRNA metabolism
-
Cuenca-Bono B., Garcia-Molinero V., Pascual-Garcia P., Garcia-Oliver E., Llopis A., Rodriguez-Navarro S. A novel link between Sus1 and the cytoplasmic mRNA decay machinery suggests a broad role in mRNA metabolism. BMC Cell Biol. 2010, 11:19.
-
(2010)
BMC Cell Biol.
, vol.11
, pp. 19
-
-
Cuenca-Bono, B.1
Garcia-Molinero, V.2
Pascual-Garcia, P.3
Garcia-Oliver, E.4
Llopis, A.5
Rodriguez-Navarro, S.6
-
59
-
-
34249911716
-
The RNA polymerase II CTD kinase Ctk1 functions in translation elongation
-
Rother S., Strasser K. The RNA polymerase II CTD kinase Ctk1 functions in translation elongation. Genes Dev. 2007, 21:1409-1421.
-
(2007)
Genes Dev.
, vol.21
, pp. 1409-1421
-
-
Rother, S.1
Strasser, K.2
-
60
-
-
84863540819
-
Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation
-
Sun M., Schwalb B., Schulz D., Pirkl N., Etzold S., Lariviere L., Maier K.C., Seizl M., Tresch A., Cramer P. Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation. Genome Res. 2012, 22:1350-1359.
-
(2012)
Genome Res.
, vol.22
, pp. 1350-1359
-
-
Sun, M.1
Schwalb, B.2
Schulz, D.3
Pirkl, N.4
Etzold, S.5
Lariviere, L.6
Maier, K.C.7
Seizl, M.8
Tresch, A.9
Cramer, P.10
-
61
-
-
0027490718
-
Determination of mRNA fate by different RNA polymerase II promoters
-
Enssle J., Kugler W., Hentze M.W., Kulozik A.E. Determination of mRNA fate by different RNA polymerase II promoters. Proc. Natl. Acad. Sci. U. S. A. 1993, 90:10091-10095.
-
(1993)
Proc. Natl. Acad. Sci. U. S. A.
, vol.90
, pp. 10091-10095
-
-
Enssle, J.1
Kugler, W.2
Hentze, M.W.3
Kulozik, A.E.4
-
62
-
-
84455167601
-
Promoter elements regulate cytoplasmic mRNA decay
-
Bregman A., Avraham-Kelbert M., Barkai O., Duek L., Guterman A., Choder M. Promoter elements regulate cytoplasmic mRNA decay. Cell 2011, 147:1473-1483.
-
(2011)
Cell
, vol.147
, pp. 1473-1483
-
-
Bregman, A.1
Avraham-Kelbert, M.2
Barkai, O.3
Duek, L.4
Guterman, A.5
Choder, M.6
-
63
-
-
84155195139
-
The Ccr4-not complex
-
Collart M.A., Panasenko O.O. The Ccr4-not complex. Gene 2012, 492:42-53.
-
(2012)
Gene
, vol.492
, pp. 42-53
-
-
Collart, M.A.1
Panasenko, O.O.2
-
64
-
-
77951083459
-
Major role for mRNA stability in shaping the kinetics of gene induction
-
Elkon R., Zlotorynski E., Zeller K.I., Agami R. Major role for mRNA stability in shaping the kinetics of gene induction. BMC Genomics 2010, 11:259.
-
(2010)
BMC Genomics
, vol.11
, pp. 259
-
-
Elkon, R.1
Zlotorynski, E.2
Zeller, K.I.3
Agami, R.4
-
65
-
-
3242726930
-
Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms
-
Garcia-Martinez J., Aranda A., Perez-Ortin J.E. Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms. Mol. Cell 2004, 15:303-313.
-
(2004)
Mol. Cell
, vol.15
, pp. 303-313
-
-
Garcia-Martinez, J.1
Aranda, A.2
Perez-Ortin, J.E.3
-
66
-
-
62549149882
-
MRNA stability changes precede changes in steady-state mRNA amounts during hyperosmotic stress
-
Molin C., Jauhiainen A., Warringer J., Nerman O., Sunnerhagen P. mRNA stability changes precede changes in steady-state mRNA amounts during hyperosmotic stress. RNA 2009, 15:600-614.
-
(2009)
RNA
, vol.15
, pp. 600-614
-
-
Molin, C.1
Jauhiainen, A.2
Warringer, J.3
Nerman, O.4
Sunnerhagen, P.5
-
68
-
-
79955768436
-
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells
-
Rabani M., Levin J.Z., Fan L., Adiconis X., Raychowdhury R., Garber M., Gnirke A., Nusbaum C., Hacohen N., Friedman N., Amit I., Regev A. Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells. Nat. Biotechnol. 2011, 29:436-442.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 436-442
-
-
Rabani, M.1
Levin, J.Z.2
Fan, L.3
Adiconis, X.4
Raychowdhury, R.5
Garber, M.6
Gnirke, A.7
Nusbaum, C.8
Hacohen, N.9
Friedman, N.10
Amit, I.11
Regev, A.12
-
69
-
-
53949098609
-
Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation
-
Shalem O., Dahan O., Levo M., Martinez M.R., Furman I., Segal E., Pilpel Y. Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation. Mol. Syst. Biol. 2008, 4:223.
-
(2008)
Mol. Syst. Biol.
, vol.4
, pp. 223
-
-
Shalem, O.1
Dahan, O.2
Levo, M.3
Martinez, M.R.4
Furman, I.5
Segal, E.6
Pilpel, Y.7
-
70
-
-
80053450954
-
Transcriptome kinetics is governed by a genome-wide coupling of mRNA production and degradation: a role for RNA Pol II
-
Shalem O., Groisman B., Choder M., Dahan O., Pilpel Y. Transcriptome kinetics is governed by a genome-wide coupling of mRNA production and degradation: a role for RNA Pol II. PLoS Genet. 2011, 7:e1002273.
-
(2011)
PLoS Genet.
, vol.7
-
-
Shalem, O.1
Groisman, B.2
Choder, M.3
Dahan, O.4
Pilpel, Y.5
-
71
-
-
78149487473
-
Translation by remote control
-
Preker P., Jensen T.H. Translation by remote control. Cell 2010, 143:501-502.
-
(2010)
Cell
, vol.143
, pp. 501-502
-
-
Preker, P.1
Jensen, T.H.2
-
72
-
-
79960903971
-
Coupled evolution of transcription and mRNA degradation
-
Dori-Bachash M., Shema E., Tirosh I. Coupled evolution of transcription and mRNA degradation. PLoS Biol. 2011, 9:e1001106.
-
(2011)
PLoS Biol.
, vol.9
-
-
Dori-Bachash, M.1
Shema, E.2
Tirosh, I.3
-
73
-
-
79960633906
-
Regulatory mechanisms and networks couple the different phases of gene expression
-
Dahan O., Gingold H., Pilpel Y. Regulatory mechanisms and networks couple the different phases of gene expression. Trends Genet. 2011, 27:316-322.
-
(2011)
Trends Genet.
, vol.27
, pp. 316-322
-
-
Dahan, O.1
Gingold, H.2
Pilpel, Y.3
-
74
-
-
77951541717
-
A NusE:NusG complex links transcription and translation
-
Burmann B.M., Schweimer K., Luo X., Wahl M.C., Stitt B.L., Gottesman M.E., Rosch P. A NusE:NusG complex links transcription and translation. Science 2010, 328:501-504.
-
(2010)
Science
, vol.328
, pp. 501-504
-
-
Burmann, B.M.1
Schweimer, K.2
Luo, X.3
Wahl, M.C.4
Stitt, B.L.5
Gottesman, M.E.6
Rosch, P.7
-
75
-
-
77951589688
-
Cooperation between translating ribosomes and RNA polymerase in transcription elongation
-
Proshkin S., Rahmouni A.R., Mironov A., Nudler E. Cooperation between translating ribosomes and RNA polymerase in transcription elongation. Science 2010, 328:504-508.
-
(2010)
Science
, vol.328
, pp. 504-508
-
-
Proshkin, S.1
Rahmouni, A.R.2
Mironov, A.3
Nudler, E.4
-
76
-
-
0019426060
-
Attenuation in the control of expression of bacterial operons
-
Yanofsky C. Attenuation in the control of expression of bacterial operons. Nature 1981, 289:751-758.
-
(1981)
Nature
, vol.289
, pp. 751-758
-
-
Yanofsky, C.1
-
77
-
-
57149104117
-
Identification and characterization of extensive intra-molecular associations between 3'-UTRs and their ORFs
-
Eldad N., Yosefzon Y., Arava Y. Identification and characterization of extensive intra-molecular associations between 3'-UTRs and their ORFs. Nucleic Acids Res. 2008, 36:6728-6738.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 6728-6738
-
-
Eldad, N.1
Yosefzon, Y.2
Arava, Y.3
|