메뉴 건너뛰기




Volumn 54, Issue 10, 2014, Pages 3005-3019

Discovery of inhibitors of schistosoma mansoni hdac8 by combining homology modeling, virtual screening, and in vitro validation

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; CRYSTAL STRUCTURE; MACHINERY; SULFUR COMPOUNDS;

EID: 84908251020     PISSN: 15499596     EISSN: 1549960X     Source Type: Journal    
DOI: 10.1021/ci5004653     Document Type: Article
Times cited : (54)

References (53)
  • 1
    • 80054953179 scopus 로고    scopus 로고
    • Schistosomiasis
    • Brown, M. Schistosomiasis Clin. Med. 2011, 11, 479-482
    • (2011) Clin. Med. , vol.11 , pp. 479-482
    • Brown, M.1
  • 3
    • 84859001797 scopus 로고    scopus 로고
    • Diagnosis and management of schistosomiasis
    • Gray, D. J.; Ross, A. G.; Li, Y. S.; McManus, D. P. Diagnosis and management of schistosomiasis BMJ 2011, 10.1136/bmj.d2651
    • (2011) BMJ
    • Gray, D.J.1    Ross, A.G.2    Li, Y.S.3    McManus, D.P.4
  • 4
    • 77956418613 scopus 로고    scopus 로고
    • Praziquantel and Schistosomiasis
    • Dömling, A.; Khoury, K. Praziquantel and Schistosomiasis ChemMedChem. 2010, 5, 1420-1434
    • (2010) ChemMedChem. , vol.5 , pp. 1420-1434
    • Dömling, A.1    Khoury, K.2
  • 7
    • 57049129327 scopus 로고    scopus 로고
    • Praziquantel: Mechanisms of action, resistance and new derivatives for schistosomiasis
    • Doenhoff, M. J.; Cioli, D.; Utzinger, J. Praziquantel: mechanisms of action, resistance and new derivatives for schistosomiasis Curr. Opin. Infect. Dis. 2008, 21, 659-67
    • (2008) Curr. Opin. Infect. Dis. , vol.21 , pp. 659-67
    • Doenhoff, M.J.1    Cioli, D.2    Utzinger, J.3
  • 8
    • 79551616739 scopus 로고    scopus 로고
    • Genetic consequences of mass human chemotherapy for Schistosoma mansoni: Population structure pre- and post-praziquantel treatment in Tanzania
    • Norton, A. J.; Gower, C. M.; Lamberton, P. H.; Webster, B. L.; Lwambo, N. J.; Blair, L.; Fenwick, A.; Webster, J. P. Genetic consequences of mass human chemotherapy for Schistosoma mansoni: population structure pre- and post-praziquantel treatment in Tanzania Am. J. Trop. Med. Hyg. 2010, 83, 951-7
    • (2010) Am. J. Trop. Med. Hyg. , vol.83 , pp. 951-7
    • Norton, A.J.1    Gower, C.M.2    Lamberton, P.H.3    Webster, B.L.4    Lwambo, N.J.5    Blair, L.6    Fenwick, A.7    Webster, J.P.8
  • 9
    • 77955283075 scopus 로고    scopus 로고
    • "Manifesto" for advancing the control and elimination of neglected tropical diseases
    • Hotez, P. J.; Pecoul, B. "Manifesto" for advancing the control and elimination of neglected tropical diseases PLoS Negl. Trop. Dis. 2010, 4, e718
    • (2010) PLoS Negl. Trop. Dis. , vol.4 , pp. 718
    • Hotez, P.J.1    Pecoul, B.2
  • 10
    • 0033569641 scopus 로고    scopus 로고
    • Epigenetics: Regulation through repression
    • Wolffe, A. P.; Matzke, M. A. Epigenetics: regulation through repression Science 1999, 286, 481-486
    • (1999) Science , vol.286 , pp. 481-486
    • Wolffe, A.P.1    Matzke, M.A.2
  • 11
    • 20344392202 scopus 로고    scopus 로고
    • Epigenetics - An epicenter of gene regulation: Histones and histone-modifying enzymes
    • Biel, M.; Wascholowski, V.; Giannis, A. Epigenetics-an epicenter of gene regulation: histones and histone-modifying enzymes Angew. Chem., Int. Ed. Engl. 2005, 44, 3186-3216
    • (2005) Angew. Chem., Int. Ed. Engl. , vol.44 , pp. 3186-3216
    • Biel, M.1    Wascholowski, V.2    Giannis, A.3
  • 12
    • 23844514827 scopus 로고    scopus 로고
    • Chromatin modifications as targets for new anticancer drugs
    • Schaefer, S.; Jung, M. Chromatin modifications as targets for new anticancer drugs Arch. Pharm. (Weinheim) 2005, 338, 347-357
    • (2005) Arch. Pharm. (Weinheim) , vol.338 , pp. 347-357
    • Schaefer, S.1    Jung, M.2
  • 13
    • 0034610814 scopus 로고    scopus 로고
    • The language of covalent histone modifications
    • Strahl, B. D.; Allis, C. D. The language of covalent histone modifications Nature 2000, 403, 41-5
    • (2000) Nature , vol.403 , pp. 41-5
    • Strahl, B.D.1    Allis, C.D.2
  • 16
    • 33746812188 scopus 로고    scopus 로고
    • Histone Deacetylase Enzymes as Potential targets in cancer and parasitic disease
    • Ouaissi, M.; Ouaissi, A. Histone Deacetylase Enzymes as Potential targets in cancer and parasitic disease J. Biomed. Biotechnol. 2006, 2, 1-10
    • (2006) J. Biomed. Biotechnol. , vol.2 , pp. 1-10
    • Ouaissi, M.1    Ouaissi, A.2
  • 17
    • 0030798245 scopus 로고    scopus 로고
    • Histone acetylation in chromatin structure and transcription
    • Grunstein, M. Histone acetylation in chromatin structure and transcription Nature 1997, 389, 349-352
    • (1997) Nature , vol.389 , pp. 349-352
    • Grunstein, M.1
  • 18
    • 79251566746 scopus 로고    scopus 로고
    • Physical and functional HAT/HADC interplay regulates protein acetylation balance
    • Peserico, A.; Simone, C. Physical and functional HAT/HADC interplay regulates protein acetylation balance J. Biomed. Biotechnol. 2011, 371832
    • (2011) J. Biomed. Biotechnol. , pp. 371832
    • Peserico, A.1    Simone, C.2
  • 19
    • 39749127166 scopus 로고    scopus 로고
    • The Rpd3/Hda1 family of lysine deacetylases: From bacteria and yeast to mice and men
    • Yang, X. J.; Seto, E. The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men Nat. Rev. Mol. Cell Biol. 2008, 9, 206-218
    • (2008) Nat. Rev. Mol. Cell Biol. , vol.9 , pp. 206-218
    • Yang, X.J.1    Seto, E.2
  • 20
    • 2942564591 scopus 로고    scopus 로고
    • Sirtuins: Sir2-related NAD-dependent protein deacetylases
    • North, B. J.; Verdin, E. Sirtuins: Sir2-related NAD-dependent protein deacetylases Genome Biol. 2004, 5, 224
    • (2004) Genome Biol. , vol.5 , pp. 224
    • North, B.J.1    Verdin, E.2
  • 24
    • 43049091210 scopus 로고    scopus 로고
    • Structural insights into the Plasmodium falciparum histone deacetylase 1 (PfHDAC-1): A novel target for the development of antimalarial therapy
    • Mukherjee, P.; Pradhan, A.; Shah, F.; Tekwani, B. L.; Avery, M. Structural insights into the Plasmodium falciparum histone deacetylase 1 (PfHDAC-1): A novel target for the development of antimalarial therapy Bioorg. Med. Chem. 2008, 16, 5254-5265
    • (2008) Bioorg. Med. Chem. , vol.16 , pp. 5254-5265
    • Mukherjee, P.1    Pradhan, A.2    Shah, F.3    Tekwani, B.L.4    Avery, M.5
  • 26
    • 84864722456 scopus 로고    scopus 로고
    • Histone deacetylase inhibitors in the treatment of cancer: Overview and perpectives
    • Giannini, G.; Cabri, W.; Fattorusso, C.; Rodriquez, M. Histone deacetylase inhibitors in the treatment of cancer: overview and perpectives Future Med. Chem. 2012, 4, 1439-1460
    • (2012) Future Med. Chem. , vol.4 , pp. 1439-1460
    • Giannini, G.1    Cabri, W.2    Fattorusso, C.3    Rodriquez, M.4
  • 27
    • 0034192770 scopus 로고    scopus 로고
    • Anti-malarial effect of histone deacetylation inhibitors and mammalian tumour cytodifferentiating agents
    • Andrews, K. T.; Walduck, A.; Kelso, M. J.; Fairlie, D. P.; Saul, A.; Parsons, P. G. Anti-malarial effect of histone deacetylation inhibitors and mammalian tumour cytodifferentiating agents Int. J. Parasitol. 2000, 30, 761-768
    • (2000) Int. J. Parasitol. , vol.30 , pp. 761-768
    • Andrews, K.T.1    Walduck, A.2    Kelso, M.J.3    Fairlie, D.P.4    Saul, A.5    Parsons, P.G.6
  • 29
    • 68749093790 scopus 로고    scopus 로고
    • Histone deacetylase inhibitors induce apoptosis, histone hyperacetylation and up-regulation of gene transcription in Schistosoma mansoni
    • Dubois, F.; Caby, S.; Oger, F.; Cosseau, C.; Capron, M.; Grunau, C.; Dissous, C.; Pierce, R. J. Histone deacetylase inhibitors induce apoptosis, histone hyperacetylation and up-regulation of gene transcription in Schistosoma mansoni Mol. Biochem. Parasitol. 2009, 168, 7-15
    • (2009) Mol. Biochem. Parasitol. , vol.168 , pp. 7-15
    • Dubois, F.1    Caby, S.2    Oger, F.3    Cosseau, C.4    Capron, M.5    Grunau, C.6    Dissous, C.7    Pierce, R.J.8
  • 34
    • 0027136282 scopus 로고
    • Comparative protein modelling by satisfaction of spatial restraints
    • Sali, A.; Blundell, T. L. Comparative protein modelling by satisfaction of spatial restraints J. Mol. Biol. 1993, 234, 779-815
    • (1993) J. Mol. Biol. , vol.234 , pp. 779-815
    • Sali, A.1    Blundell, T.L.2
  • 39
    • 0000510540 scopus 로고    scopus 로고
    • Novel zinc protein molecular dynamics simulations: Steps toward antiangiogenesis for cancer treatment
    • Pang, Y. P. Novel zinc protein molecular dynamics simulations: Steps toward antiangiogenesis for cancer treatment J. Mol. Model. 1999, 5, 196-202
    • (1999) J. Mol. Model. , vol.5 , pp. 196-202
    • Pang, Y.P.1
  • 40
    • 33846823909 scopus 로고
    • Particle mesh Ewald: An N-log(N) method for Ewald sums in large systems
    • Darden, T.; York, D.; Pedersen, L. Particle mesh Ewald: An N-log(N) method for Ewald sums in large systems J. Chem. Phys. 1993, 98, 10089-10092
    • (1993) J. Chem. Phys. , vol.98 , pp. 10089-10092
    • Darden, T.1    York, D.2    Pedersen, L.3
  • 41
    • 84986440341 scopus 로고
    • Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models
    • Miyamoto, S.; Kollman, P. A. Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models J. Comput. Chem. 1992, 13, 952-962
    • (1992) J. Comput. Chem. , vol.13 , pp. 952-962
    • Miyamoto, S.1    Kollman, P.A.2
  • 42
    • 33846227108 scopus 로고    scopus 로고
    • Enhanced sampling of peptide and protein conformations using replica exchange simulations with a peptide backbone biasing-potential
    • Kannan, S.; Zacharias, M. Enhanced sampling of peptide and protein conformations using replica exchange simulations with a peptide backbone biasing-potential Proteins 2007, 66, 697-706
    • (2007) Proteins , vol.66 , pp. 697-706
    • Kannan, S.1    Zacharias, M.2
  • 46
    • 0031552362 scopus 로고    scopus 로고
    • Development and validation of a genetic algorithm for flexible docking
    • Jones, G.; Willett, P.; Glen, R. C.; Leach, A. R.; Taylor, R. Development and validation of a genetic algorithm for flexible docking J. Mol. Biol. 1997, 267, 727-748
    • (1997) J. Mol. Biol. , vol.267 , pp. 727-748
    • Jones, G.1    Willett, P.2    Glen, R.C.3    Leach, A.R.4    Taylor, R.5
  • 47
    • 0032533791 scopus 로고    scopus 로고
    • Flexible docking using Tabu search and an empirical estimate of binding affinity
    • Baxter, C. A.; Murray, C. W.; Clark, D. E.; Westhead, D. R.; Eldridge, M. D. Flexible docking using Tabu search and an empirical estimate of binding affinity Proteins 1998, 33, 367-382
    • (1998) Proteins , vol.33 , pp. 367-382
    • Baxter, C.A.1    Murray, C.W.2    Clark, D.E.3    Westhead, D.R.4    Eldridge, M.D.5
  • 48
    • 26444468103 scopus 로고    scopus 로고
    • General and Targeted Statistical Potentials for Protein-Ligand Interactions
    • Mooij, W. T. M.; Verdonk, M. L. General and Targeted Statistical Potentials for Protein-Ligand Interactions Proteins: Struct. Funct. Bioinf. 2005, 61, 72-287
    • (2005) Proteins: Struct. Funct. Bioinf. , vol.61 , pp. 72-287
    • Mooij, W.T.M.1    Verdonk, M.L.2
  • 49
    • 62449330667 scopus 로고    scopus 로고
    • Empirical Scoring Functions for Advanced Protein- Ligand Docking with PLANTSO
    • Stützle, K. T.; Exner, T. E. Empirical Scoring Functions for Advanced Protein- Ligand Docking with PLANTSO J. Chem. Inf. Model. 2009, 49, 84-96
    • (2009) J. Chem. Inf. Model. , vol.49 , pp. 84-96
    • Stützle, K.T.1    Exner, T.E.2
  • 51
    • 77950679234 scopus 로고    scopus 로고
    • A Structure-Based Virtual Screening Approach toward the Discovery of Histone Deacetylase Inhibitors: Identification of Promising Zinc-Chelating Groups
    • Park, H.; Kim, S.; Kim, Y.; Lim, S. J. A Structure-Based Virtual Screening Approach toward the Discovery of Histone Deacetylase Inhibitors: Identification of Promising Zinc-Chelating Groups Chem. Med. Chem. 2010, 5, 591-597
    • (2010) Chem. Med. Chem. , vol.5 , pp. 591-597
    • Park, H.1    Kim, S.2    Kim, Y.3    Lim, S.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.