-
1
-
-
0024460765
-
Organization and expression of genes involved in the biosynthesis of antibiotics and other secondary metabolites
-
Martín MF, Liras P (1989) Organization and expression of genes involved in the biosynthesis of antibiotics and other secondary metabolites. Annual Review of Microbiology 43:173-206. doi:10.1146/annurev. mi.43.100189.001133.
-
(1989)
Annual Review of Microbiology
, vol.43
, pp. 173-206
-
-
Martín, M.F.1
Liras, P.2
-
2
-
-
0031079973
-
Metabolic pathway gene clusters in Filamentous Fungi
-
Keller Hohn (1997) Metabolic Pathway Gene Clusters in Filamentous Fungi. Fungal Genetics and Biology: FG & B 21:17-29.
-
(1997)
Fungal Genetics and Biology: FG & B
, vol.21
, pp. 17-29
-
-
Hohn, K.1
-
3
-
-
9444275028
-
Convergent evolution of chromosomal sex-determining regions in the animal and fungal kingdoms
-
Fraser JA, Diezmann S, Subaran RL, Allen A, Lengeler KB, et al. (2004) Convergent evolution of chromosomal sex-determining regions in the animal and fungal kingdoms. PLoS Biology 2:e384. doi:10.1371/journal.-pbio.0020384.
-
(2004)
PLoS Biology
, vol.2
, pp. e384
-
-
Fraser, J.A.1
Diezmann, S.2
Subaran, R.L.3
Allen, A.4
Lengeler, K.B.5
-
4
-
-
77949714038
-
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
-
Ma L-J, van der Does HC, Borkovich KA, Coleman JJ, Daboussi M-J, et al. (2010) Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature 464:367-373. doi:10.1038/nature08850.
-
(2010)
Nature
, vol.464
, pp. 367-373
-
-
Ma, L.-J.1
Van Der Does, H.C.2
Borkovich, K.A.3
Coleman, J.J.4
Daboussi, M.-J.5
-
5
-
-
84879514195
-
Deciphering the cryptic genome: Genome-wide analyses of the rice pathogen Fusarium fujikuroi reveal complex regulation of secondary metabolism and novel metabolites
-
Wiemann P, Sieber CMK, von Bargen KW, Studt L, Niehaus E-M, et al. (2013) Deciphering the cryptic genome: genome-wide analyses of the rice pathogen Fusarium fujikuroi reveal complex regulation of secondary metabolism and novel metabolites. PLoS Pathog 9:e1003475. doi:10.1371/journal.ppat.1003475.
-
(2013)
PLoS Pathog
, vol.9
, pp. e1003475
-
-
Wiemann, P.1
Sieber, C.M.K.2
Von Bargen, K.W.3
Studt, L.4
Niehaus, E.-M.5
-
7
-
-
33644855184
-
Molecular analysis of an inactive aflatoxin biosynthesis gene cluster in Aspergillus oryzae RIB strains
-
Tominaga M, Lee Y-H, Hayashi R, Suzuki Y, Yamada O, et al. (2006) Molecular analysis of an inactive aflatoxin biosynthesis gene cluster in Aspergillus oryzae RIB strains. Applied and Environmental Microbiology 72:484-490. doi:10.1128/AEM.72.1.484-490.2006.
-
(2006)
Applied and Environmental Microbiology
, vol.72
, pp. 484-490
-
-
Tominaga, M.1
Lee, Y.-H.2
Hayashi, R.3
Suzuki, Y.4
Yamada, O.5
-
8
-
-
44649085135
-
Magnaporthe grisea avirulence gene ACE1 belongs to an infection-specific gene cluster involved in secondary metabolism
-
Collemare J, Pianfetti M, Houlle A-E, Morin D, Camborde L, et al. (2008) Magnaporthe grisea avirulence gene ACE1 belongs to an infection-specific gene cluster involved in secondary metabolism. New Phytol 179:196-208. doi:10.1111/j.1469-8137.2008.02459.x.
-
(2008)
New Phytol
, vol.179
, pp. 196-208
-
-
Collemare, J.1
Pianfetti, M.2
Houlle, A.-E.3
Morin, D.4
Camborde, L.5
-
9
-
-
80052154073
-
Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation
-
Nützmann H-W, Reyes-Dominguez Y, Scherlach K, Schroeckh V, Horn F, et al. (2011) Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation. Proc Natl Acad Sci USA 108:14282-14287. doi:10.1073/pnas.1103523108.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 14282-14287
-
-
Nützmann, H.-W.1
Reyes-Dominguez, Y.2
Scherlach, K.3
Schroeckh, V.4
Horn, F.5
-
10
-
-
84898030476
-
Bacterial SET domain proteins and their role in eukaryotic chromatin modification
-
Accessed 29 April 2014
-
Alvarez-Venegas R (2014) Bacterial SET domain proteins and their role in eukaryotic chromatin modification. Front Genet 5. Available: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3980110/. Accessed 29 April 2014.
-
(2014)
Front Genet
, vol.5
-
-
Alvarez-Venegas, R.1
-
11
-
-
67650321573
-
Chromatin-level regulation of biosynthetic gene clusters
-
Bok JW, Chiang Y-M, Szewczyk E, Reyes-Domingez Y, Davidson AD, et al. (2009) Chromatin-level regulation of biosynthetic gene clusters. Nature Chemical Biology 5:462-464. doi:10.1038/nchembio.177.
-
(2009)
Nature Chemical Biology
, vol.5
, pp. 462-464
-
-
Bok, J.W.1
Chiang, Y.-M.2
Szewczyk, E.3
Reyes-Domingez, Y.4
Davidson, A.D.5
-
12
-
-
78650198931
-
Fungal secondary metabolites - Strategies to activate silent gene clusters
-
Brakhage AA, Schroeckh V (2011) Fungal secondary metabolites - strategies to activate silent gene clusters. Fungal genetics and biology: FG & B 48:15-22. doi:10.1016/j.fgb.2010.04.004.
-
(2011)
Fungal Genetics and Biology: FG & B
, vol.48
, pp. 15-22
-
-
Brakhage, A.A.1
Schroeckh, V.2
-
13
-
-
84887305892
-
The Fusarium graminearum Histone H3 K27 Methyltransferase KMT6 Regulates Development and Expression of Secondary Metabolite Gene Clusters
-
Connolly LR, Smith KM, Freitag M (2013) The Fusarium graminearum Histone H3 K27 Methyltransferase KMT6 Regulates Development and Expression of Secondary Metabolite Gene Clusters. PLoS Genet 9:e1003916. doi:10.1371/journal.pgen. 1003916.
-
(2013)
PLoS Genet
, vol.9
, pp. e1003916
-
-
Connolly, L.R.1
Smith, K.M.2
Freitag, M.3
-
14
-
-
77955428831
-
Secondary metabolism in fungi: Does chromosomal location matter?
-
Palmer JM, Keller NP (2010) Secondary metabolism in fungi: does chromosomal location matter? Current opinion in microbiology 13:431-436. doi:10.1016/j.mib.2010.04.008.
-
(2010)
Current Opinion in Microbiology
, vol.13
, pp. 431-436
-
-
Palmer, J.M.1
Keller, N.P.2
-
15
-
-
70149109184
-
Intimate bacterial-fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans
-
Schroeckh V, Scherlach K, Nützmann H-W, Shelest E, Schmidt-Heck W, et al. (2009) Intimate bacterial-fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans. Proceedings of the National Academy of Sciences of the United States of America 106:14558-14563. doi:10.1073/pnas.0901870106.
-
(2009)
Proceedings of the National Academy of Sciences of the United States of America
, vol.106
, pp. 14558-14563
-
-
Schroeckh, V.1
Scherlach, K.2
Nützmann, H.-W.3
Shelest, E.4
Schmidt-Heck, W.5
-
16
-
-
78650200243
-
Regulation of secondary metabolism by chromatin structure and epigenetic codes
-
Strauss J, Reyes-Dominguez Y (2011) Regulation of secondary metabolism by chromatin structure and epigenetic codes. Fungal genetics and biology: FG & B 48:62-69. doi:10.1016/j.fgb.2010.07.009.
-
(2011)
Fungal Genetics and Biology: FG & B
, vol.48
, pp. 62-69
-
-
Strauss, J.1
Reyes-Dominguez, Y.2
-
17
-
-
84876692068
-
Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A.Fumigatus, A. Niger and A. Oryzae
-
Inglis DO, Binkley J, Skrzypek MS, Arnaud MB, Cerqueira GC, et al. (2013) Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A.fumigatus, A. niger and A. oryzae. BMC Microbiol 13:91. doi:10.1186/1471-2180-13-91.
-
(2013)
BMC Microbiol
, vol.13
, pp. 91
-
-
Inglis, D.O.1
Binkley, J.2
Skrzypek, M.S.3
Arnaud, M.B.4
Cerqueira, G.C.5
-
18
-
-
77955274600
-
SMURF: Genomic mapping of fungal secondary metabolite clusters
-
Khaldi N, Seifuddin FT, Turner G, Haft D, Nierman WC, et al. (2010) SMURF: Genomic mapping of fungal secondary metabolite clusters. Fungal Genet Biol 47:736-741. doi:10.1016/j.fgb.2010.06.003.
-
(2010)
Fungal Genet Biol
, vol.47
, pp. 736-741
-
-
Khaldi, N.1
Seifuddin, F.T.2
Turner, G.3
Haft, D.4
Nierman, W.C.5
-
19
-
-
84879429823
-
Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum
-
Lawler K, Hammond-Kosack K, Brazma A, Coulson RM (2013) Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum. BMC Syst Biol 7:52. doi:10.1186/1752-0509-7-52.
-
(2013)
BMC Syst Biol
, vol.7
, pp. 52
-
-
Lawler, K.1
Hammond-Kosack, K.2
Brazma, A.3
Coulson, R.M.4
-
20
-
-
0032112293
-
A genome-wide transcriptional analysis of the mitotic cell cycle
-
Cho RJ, Campbell MJ, Winzeler EA, Steinmetz L, Conway A, et al. (1998) A genome-wide transcriptional analysis of the mitotic cell cycle. Molecular Cell 2:65-73.
-
(1998)
Molecular Cell
, vol.2
, pp. 65-73
-
-
Cho, R.J.1
Campbell, M.J.2
Winzeler, E.A.3
Steinmetz, L.4
Conway, A.5
-
21
-
-
1842427830
-
The evolutionary dynamics of eukaryotic gene order
-
Hurst LD, Pál C, Lercher MJ (2004) The evolutionary dynamics of eukaryotic gene order. Nature Reviews Genetics 5:299-310. doi:10.1038/nrg1319.
-
(2004)
Nature Reviews Genetics
, vol.5
, pp. 299-310
-
-
Hurst, L.D.1
Pál, C.2
Lercher, M.J.3
-
22
-
-
33748297559
-
Aflatoxigenicity in Aspergillus: Molecular genetics, phylogenetic relationships and evolutionary implications
-
Cary JW, Ehrlich KC (2006) Aflatoxigenicity in Aspergillus: molecular genetics, phylogenetic relationships and evolutionary implications. Mycopathologia 162:167-177. doi:10.1007/s11046-006-0051-8.
-
(2006)
Mycopathologia
, vol.162
, pp. 167-177
-
-
Cary, J.W.1
Ehrlich, K.C.2
-
23
-
-
44649170477
-
Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi
-
Khaldi N, Collemare J, Lebrun M-H, Wolfe K (2008) Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi. Genome Biology 9:R18. doi:10.1186/gb-2008-9-1-r18.
-
(2008)
Genome Biology
, vol.9
, pp. R18
-
-
Khaldi, N.1
Collemare, J.2
Lebrun, M.-H.3
Wolfe, K.4
-
24
-
-
70450198122
-
Evidence that a secondary metabolic biosynthetic gene cluster has grown by gene relocation during evolution of the filamentous fungus Fusarium
-
Proctor RH, McCormick SP, Alexander NJ, Desjardins AE (2009) Evidence that a secondary metabolic biosynthetic gene cluster has grown by gene relocation during evolution of the filamentous fungus Fusarium. Molecular Microbiology 74:1128-1142. doi:10.1111/j.1365-2958.2009.06927.x.
-
(2009)
Molecular Microbiology
, vol.74
, pp. 1128-1142
-
-
Proctor, R.H.1
McCormick, S.P.2
Alexander, N.J.3
Desjardins, A.E.4
-
25
-
-
0036259583
-
A conditionally dispensable chromosome controls host-specific pathogenicity in the fungal plant pathogen Alternaria alternata
-
Hatta R, Ito K, Hosaki Y, Tanaka T, Tanaka A, et al. (2002) A conditionally dispensable chromosome controls host-specific pathogenicity in the fungal plant pathogen Alternaria alternata. Genetics 161:59-70.
-
(2002)
Genetics
, vol.161
, pp. 59-70
-
-
Hatta, R.1
Ito, K.2
Hosaki, Y.3
Tanaka, T.4
Tanaka, A.5
-
26
-
-
17644412298
-
The epipolythiodioxopiperazine (ETP) class of fungal toxins: Distribution, mode of action, functions and biosynthesis
-
Gardiner DM, Waring P, Howlett BJ (2005) The epipolythiodioxopiperazine (ETP) class of fungal toxins: distribution, mode of action, functions and biosynthesis. Microbiology (Reading, England) 151:1021-1032. doi:10.1099/mic.0.27847-0.
-
(2005)
Microbiology (Reading, England)
, vol.151
, pp. 1021-1032
-
-
Gardiner, D.M.1
Waring, P.2
Howlett, B.J.3
-
27
-
-
4444376010
-
The sirodesmin biosynthetic gene cluster of the plant pathogenic fungus Leptosphaeria maculans
-
Gardiner DM, Cozijnsen AJ, Wilson LM, Pedras MSC, Howlett BJ (2004) The sirodesmin biosynthetic gene cluster of the plant pathogenic fungus Leptosphaeria maculans. Molecular Microbiology 53:1307-1318. doi:10.1111/j.1365-2958.2004.04215.x.
-
(2004)
Molecular Microbiology
, vol.53
, pp. 1307-1318
-
-
Gardiner, D.M.1
Cozijnsen, A.J.2
Wilson, L.M.3
Pedras, M.S.C.4
Howlett, B.J.5
-
28
-
-
21744453939
-
Bioinformatic and expression analysis of the putative gliotoxin biosynthetic gene cluster of Aspergillus fumigatus
-
Gardiner DM, Howlett BJ (2005) Bioinformatic and expression analysis of the putative gliotoxin biosynthetic gene cluster of Aspergillus fumigatus. FEMS Microbiology Letters 248:241-248. doi:10.1016/j.femsle.2005.05.046.
-
(2005)
FEMS Microbiology Letters
, vol.248
, pp. 241-248
-
-
Gardiner, D.M.1
Howlett, B.J.2
-
29
-
-
84863393769
-
Phylogenomic and functional domain analysis of polyketide synthases in Fusarium
-
Brown DW, Butchko RAE, Baker SE, Proctor RH (2012) Phylogenomic and functional domain analysis of polyketide synthases in Fusarium. Fungal Biol 116:318-331. doi:10.1016/j.funbio.2011.12.005.
-
(2012)
Fungal Biol
, vol.116
, pp. 318-331
-
-
Brown, D.W.1
Butchko, R.A.E.2
Baker, S.E.3
Proctor, R.H.4
-
30
-
-
34548669353
-
The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization
-
Cuomo CA, Güldener U, Xu JR, Trail F, Turgeon BG, et al. (2007) The Fusarium graminearum Genome Reveals a Link Between Localized Polymorphism and Pathogen Specialization. Science 317:1400-1402. doi:10.1126/science.1143708.
-
(2007)
Science
, vol.317
, pp. 1400-1402
-
-
Cuomo, C.A.1
Güldener, U.2
Xu, J.R.3
Trail, F.4
Turgeon, B.G.5
-
31
-
-
84859210781
-
Quick guide to polyketide synthase and nonribosomal synthetase genes in Fusarium
-
Hansen FT, Sørensen JL, Giese H, Sondergaard TE, Frandsen RJN (2012) Quick guide to polyketide synthase and nonribosomal synthetase genes in Fusarium. Int J Food Microbiol 155:128-136. doi:10.1016/j.ijfoodmicro.2012.01.018.
-
(2012)
Int J Food Microbiol
, vol.155
, pp. 128-136
-
-
Hansen, F.T.1
Sørensen, J.L.2
Giese, H.3
Sondergaard, T.E.4
Frandsen, R.J.N.5
-
32
-
-
78651291561
-
FGDB: Revisiting the genome annotation of the plant pathogen Fusarium graminearum
-
Wong P, Walter M, Lee W, Mannhaupt G, Münsterkötter M, et al. (2011) FGDB: revisiting the genome annotation of the plant pathogen Fusarium graminearum. Nucleic Acids Res 39:D637-D639. doi:10.1093/nar/gkq1016.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. D637-D639
-
-
Wong, P.1
Walter, M.2
Lee, W.3
Mannhaupt, G.4
Münsterkötter, M.5
-
33
-
-
0037335811
-
Tri1 encodes the cytochrome P450 monooxygenase for C-8 hydroxylation during trichothecene biosynthesis in Fusarium sporotrichioides and resides upstream of another new Tri gene
-
Meek IB, Peplow AW, Ake C, Phillips TD, Beremand MN (2003) Tri1 encodes the cytochrome P450 monooxygenase for C-8 hydroxylation during trichothecene biosynthesis in Fusarium sporotrichioides and resides upstream of another new Tri gene. Applied and Environmental Microbiology 69:1607-1613.
-
(2003)
Applied and Environmental Microbiology
, vol.69
, pp. 1607-1613
-
-
Meek, I.B.1
Peplow, A.W.2
Ake, C.3
Phillips, T.D.4
Beremand, M.N.5
-
34
-
-
15244355141
-
Gibberellin biosynthesis in fungi: Genes, enzymes, evolution, and impact on biotechnology
-
Tudzynski B (2005) Gibberellin biosynthesis in fungi: genes, enzymes, evolution, and impact on biotechnology. Applied Microbiology and Biotechnology 66:597-611. doi:10.1007/s00253-004-1805-1.
-
(2005)
Applied Microbiology and Biotechnology
, vol.66
, pp. 597-611
-
-
Tudzynski, B.1
-
35
-
-
0002386913
-
On the interpretation of x 2 from contingency tables, and the calculation of P
-
Fisher RA (1922) On the interpretation of x 2 from contingency tables, and the calculation of P. Journal of the Royal Statistical Society 85:87-94.
-
(1922)
Journal of the Royal Statistical Society
, vol.85
, pp. 87-94
-
-
Fisher, R.A.1
-
36
-
-
20144387482
-
Identification of a gene cluster responsible for the biosynthesis of aurofusarin in the Fusarium graminearum species complex
-
Malz S, Grell MN, Thrane C, Maier FJ, Rosager P, et al. (2005) Identification of a gene cluster responsible for the biosynthesis of aurofusarin in the Fusarium graminearum species complex. Fungal Genetics and Biology: FG & B 42:420-433. doi:10.1016/j.fgb.2005.01.010.
-
(2005)
Fungal Genetics and Biology: FG & B
, vol.42
, pp. 420-433
-
-
Malz, S.1
Grell, M.N.2
Thrane, C.3
Maier, F.J.4
Rosager, P.5
-
37
-
-
84861109134
-
PLEXdb: Gene expression resources for plants and plant pathogens
-
Dash S, Van Hemert J, Hong L, Wise RP, Dickerson JA (2012) PLEXdb: gene expression resources for plants and plant pathogens. Nucleic Acids Res 40:D1194-D1201. doi:10.1093/nar/gkr938.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. D1194-D1201
-
-
Dash, S.1
Van Hemert, J.2
Hong, L.3
Wise, R.P.4
Dickerson, J.A.5
-
38
-
-
33646153990
-
Development of a Fusarium graminearum Affymetrix GeneChip for profiling fungal gene expression in vitro and in planta
-
Güldener U, Seong K-Y, Boddu J, Cho S, Trail F, et al. (2006) Development of a Fusarium graminearum Affymetrix GeneChip for profiling fungal gene expression in vitro and in planta. Fungal Genet Biol 43:316-325. doi:10.1016/j.fgb.2006.01.005.
-
(2006)
Fungal Genet Biol
, vol.43
, pp. 316-325
-
-
Güldener, U.1
Seong, K.-Y.2
Boddu, J.3
Cho, S.4
Trail, F.5
-
39
-
-
39749121465
-
Conidial germination in the filamentous fungus Fusarium graminearum
-
Seong KY, Zhao X, Xu JR, Güldener U, Kistler HC (2008) Conidial germination in the filamentous fungus Fusarium graminearum. FungalGenetBiol 45:389-399.
-
(2008)
FungalGenetBiol
, vol.45
, pp. 389-399
-
-
Seong, K.Y.1
Zhao, X.2
Xu, J.R.3
Güldener, U.4
Kistler, H.C.5
-
40
-
-
84873027806
-
In planta stage-specific fungal gene profiling elucidates the molecular strategies of fusarium graminearum growing inside wheat coleoptiles
-
Zhang X-W, Jia L-J, Zhang Y, Jiang G, Li X, et al. (2012) In Planta Stage-Specific Fungal Gene Profiling Elucidates the Molecular Strategies of Fusarium graminearum Growing inside Wheat Coleoptiles. Plant Cell 24:5159-5176. doi:10.1105/tpc.112.105957.
-
(2012)
Plant Cell
, vol.24
, pp. 5159-5176
-
-
Zhang, X.-W.1
Jia, L.-J.2
Zhang, Y.3
Jiang, G.4
Li, X.5
-
41
-
-
80051591770
-
The transcriptome of Fusarium graminearum during the infection of wheat
-
Lysøe E, Seong K-Y, Kistler HC (2011) The transcriptome of Fusarium graminearum during the infection of wheat. Molecular Plant-Microbe Interactions 24:995-1000. doi:10.1094/MPMI-02-11-0038.
-
(2011)
Molecular Plant-microbe Interactions
, vol.24
, pp. 995-1000
-
-
Lysøe, E.1
Seong, K.-Y.2
Kistler, H.C.3
-
42
-
-
57149112956
-
Phases of infection and gene expression of Fusarium graminearum during crown rot disease of wheat
-
Stephens AE, Gardiner DM, White RG, Munn AL, Manners JM (2008) Phases of infection and gene expression of Fusarium graminearum during crown rot disease of wheat. Mol Plant Microbe Interact 21:1571-1581. doi:10.1094/MPMI-21-12-1571.
-
(2008)
Mol Plant Microbe Interact
, vol.21
, pp. 1571-1581
-
-
Stephens, A.E.1
Gardiner, D.M.2
White, R.G.3
Munn, A.L.4
Manners, J.M.5
-
43
-
-
64149096403
-
Global gene regulation by Fusarium transcription factors Tri6 and Tri10 reveals adaptations for toxin biosynthesis
-
Seong K-Y, Pasquali M, Zhou X, Song J, Hilburn K, et al. (2009) Global gene regulation by Fusarium transcription factors Tri6 and Tri10 reveals adaptations for toxin biosynthesis. Mol Microbiol 72:354-367. doi:10.1111/j.1365-2958.2009.06649.x.
-
(2009)
Mol Microbiol
, vol.72
, pp. 354-367
-
-
Seong, K.-Y.1
Pasquali, M.2
Zhou, X.3
Song, J.4
Hilburn, K.5
-
44
-
-
78650631005
-
The transcription factor FgStuAp influences spore development, pathogenicity, and secondary metabolism in Fusarium graminearum
-
Lysøe E, Pasquali M, Breakspear A, Kistler HC (2011) The transcription factor FgStuAp influences spore development, pathogenicity, and secondary metabolism in Fusarium graminearum. Mol Plant Microbe Interact 24:54-67. doi:10.1094/MPMI-03-10-0075.
-
(2011)
Mol Plant Microbe Interact
, vol.24
, pp. 54-67
-
-
Lysøe, E.1
Pasquali, M.2
Breakspear, A.3
Kistler, H.C.4
-
45
-
-
84863687977
-
The Wor1-like protein Fgp1 regulates pathogenicity, toxin synthesis and reproduction in the phytopathogenic fungus Fusarium graminearum
-
Jonkers W, Dong Y, Broz K, Kistler HC (2012) The Wor1-like protein Fgp1 regulates pathogenicity, toxin synthesis and reproduction in the phytopathogenic fungus Fusarium graminearum. PLoS Pathog 8:e1002724. doi:10.1371/journal.ppat.1002724.
-
(2012)
PLoS Pathog
, vol.8
, pp. e1002724
-
-
Jonkers, W.1
Dong, Y.2
Broz, K.3
Kistler, H.C.4
-
46
-
-
69949131247
-
Low pH regulates the production of deoxynivalenol by Fusarium graminearum
-
Gardiner DM, Osborne S, Kazan K, Manners JM (2009) Low pH regulates the production of deoxynivalenol by Fusarium graminearum. Microbiology (Reading, Engl) 155:3149-3156. doi:10.1099/mic.0.029546-0.
-
(2009)
Microbiology (Reading, Engl)
, vol.155
, pp. 3149-3156
-
-
Gardiner, D.M.1
Osborne, S.2
Kazan, K.3
Manners, J.M.4
-
47
-
-
72949097511
-
Triacylglyceride metabolism by Fusarium graminearum during colonization and sexual development on wheat
-
Guenther JC, Hallen-Adams HE, Bücking H, Shachar-Hill Y, Trail F (2009) Triacylglyceride metabolism by Fusarium graminearum during colonization and sexual development on wheat. Mol Plant Microbe Interact 22:1492-1503. doi:10.1094/MPMI-22-12-1492.
-
(2009)
Mol Plant Microbe Interact
, vol.22
, pp. 1492-1503
-
-
Guenther, J.C.1
Hallen-Adams, H.E.2
Bücking, H.3
Shachar-Hill, Y.4
Trail, F.5
-
48
-
-
1442358129
-
Functional demarcation of the Fusarium core trichothecene gene cluster
-
Brown DW, Dyer RB, McCormick SP, Kendra DF, Plattner RD (2004) Functional demarcation of the Fusarium core trichothecene gene cluster. Fungal Genetics and Biology: FG & B 41:454-462. doi:10.1016/j.fgb.2003.12.002.
-
(2004)
Fungal Genetics and Biology: FG & B
, vol.41
, pp. 454-462
-
-
Brown, D.W.1
Dyer, R.B.2
McCormick, S.P.3
Kendra, D.F.4
Plattner, R.D.5
-
49
-
-
0027306797
-
Trichothecene biosynthesis in Fusarium species: Chemistry, genetics, and significance
-
Desjardins AE, Hohn TM, McCormick SP (1993) Trichothecene biosynthesis in Fusarium species: chemistry, genetics, and significance. Microbiological Reviews 57:595-604.
-
(1993)
Microbiological Reviews
, vol.57
, pp. 595-604
-
-
Desjardins, A.E.1
Hohn, T.M.2
McCormick, S.P.3
-
50
-
-
33847252494
-
A novel gene cluster in Fusarium graminearum contains a gene that contributes to butenolide synthesis
-
Harris LJ, Alexander NJ, Saparno A, Blackwell B, McCormick SP, et al. (2007) A novel gene cluster in Fusarium graminearum contains a gene that contributes to butenolide synthesis. Fungal Genetics and Biology: FG & B 44:293-306. doi:10.1016/j.fgb.2006.11.001.
-
(2007)
Fungal Genetics and Biology: FG & B
, vol.44
, pp. 293-306
-
-
Harris, L.J.1
Alexander, N.J.2
Saparno, A.3
Blackwell, B.4
McCormick, S.P.5
-
51
-
-
27744459121
-
Functional analysis of the polyketide synthase genes in the filamentous fungus Gibberella zeae (anamorph Fusarium graminearum)
-
Gaffoor I, Brown DW, Plattner R, Proctor RH, Qi W, et al. (2005) Functional analysis of the polyketide synthase genes in the filamentous fungus Gibberella zeae (anamorph Fusarium graminearum). Eukaryotic Cell 4:1926-1933. doi:10.1128/EC.4.11.1926-1933.2005.
-
(2005)
Eukaryotic Cell
, vol.4
, pp. 1926-1933
-
-
Gaffoor, I.1
Brown, D.W.2
Plattner, R.3
Proctor, R.H.4
Qi, W.5
-
52
-
-
36749024667
-
Development of monoclonal antibodies for the fusarin mycotoxins
-
Maragos CM, Busman M, Plattner RD (2008) Development of monoclonal antibodies for the fusarin mycotoxins. Food additives & contaminants Part A, Chemistry, analysis, control, exposure & risk assessment 25:105-114. doi:10.1080/02652030701518098.
-
(2008)
Food Additives & Contaminants Part A, Chemistry, Analysis, Control, Exposure & Risk Assessment
, vol.25
, pp. 105-114
-
-
Maragos, C.M.1
Busman, M.2
Plattner, R.D.3
-
53
-
-
33846283454
-
Synthesis of [1, 2-13C2, 15N]-L-homoserine and its incorporation by the PKS-NRPS system of Fusarium moniliforme into the mycotoxin fusarin C
-
Rees DO, Bushby N, Cox RJ, Harding JR, Simpson TJ, et al. (2007) Synthesis of [1, 2-13C2, 15N]-L-homoserine and its incorporation by the PKS-NRPS system of Fusarium moniliforme into the mycotoxin fusarin C. Chembiochem: a European journal of chemical biology 8:46-50. doi:10.1002/cbic.200600404.
-
(2007)
Chembiochem: A European Journal of Chemical Biology
, vol.8
, pp. 46-50
-
-
Rees, D.O.1
Bushby, N.2
Cox, R.J.3
Harding, J.R.4
Simpson, T.J.5
-
54
-
-
84862830250
-
Production of novel fusarielins by ectopic activation of the polyketide synthase 9 cluster in Fusarium graminearum
-
Sørensen JL, Hansen FT, Sondergaard TE, Staerk D, Lee TV, et al. (2012) Production of novel fusarielins by ectopic activation of the polyketide synthase 9 cluster in Fusarium graminearum. Environ Microbiol 14:1159-1170. doi:10.1111/j.1462-2920.2011.02696.x.
-
(2012)
Environ Microbiol
, vol.14
, pp. 1159-1170
-
-
Sørensen, J.L.1
Hansen, F.T.2
Sondergaard, T.E.3
Staerk, D.4
Lee, T.V.5
-
55
-
-
72949093855
-
Novel genes of Fusarium graminearum that negatively regulate deoxynivalenol production and virulence
-
Gardiner DM, Kazan K, Manners JM (2009) Novel genes of Fusarium graminearum that negatively regulate deoxynivalenol production and virulence. Mol Plant Microbe Interact 22:1588-1600. doi:10.1094/MPMI-22-12-1588.
-
(2009)
Mol Plant Microbe Interact
, vol.22
, pp. 1588-1600
-
-
Gardiner, D.M.1
Kazan, K.2
Manners, J.M.3
-
56
-
-
0032827747
-
Characterization of a transcriptional activator controlling trichothecene toxin biosynthesis
-
Hohn TM, Krishna R, Proctor RH (1999) Characterization of a transcriptional activator controlling trichothecene toxin biosynthesis. Fungal Genetics and Biology: FG & B 26:224-235. doi:10.1006/fgbi.1999.1122.
-
(1999)
Fungal Genetics and Biology: FG & B
, vol.26
, pp. 224-235
-
-
Hohn, T.M.1
Krishna, R.2
Proctor, R.H.3
-
57
-
-
0037468669
-
The trichothecene biosynthesis gene cluster of Fusarium graminearum F15 contains a limited number of essential pathway genes and expressed non-essential genes
-
Kimura M, Tokai T, O'Donnell K, Ward TJ, Fujimura M, et al. (2003) The trichothecene biosynthesis gene cluster of Fusarium graminearum F15 contains a limited number of essential pathway genes and expressed non-essential genes. FEBS Letters 539:105-110.
-
(2003)
FEBS Letters
, vol.539
, pp. 105-110
-
-
Kimura, M.1
Tokai, T.2
O'Donnell, K.3
Ward, T.J.4
Fujimura, M.5
-
59
-
-
80053456835
-
Tri6 is a global transcription regulator in the phytopathogen Fusarium graminearum
-
Nasmith CG, Walkowiak S, Wang L, Leung WWY, Gong Y, et al. (2011) Tri6 is a global transcription regulator in the phytopathogen Fusarium graminearum. PLoS Pathog 7:e1002266. doi:10.1371/journal.ppat.1002266.
-
(2011)
PLoS Pathog
, vol.7
, pp. e1002266
-
-
Nasmith, C.G.1
Walkowiak, S.2
Wang, L.3
Leung, W.W.Y.4
Gong, Y.5
-
60
-
-
10744233840
-
Detoxification of the Fusarium mycotoxin deoxynivalenol by a UDP-glucosyltransferase from Arabidopsis thaliana
-
Poppenberger B, Berthiller F, Lucyshyn D, Sieberer T, Schuhmacher R, et al. (2003) Detoxification of the Fusarium mycotoxin deoxynivalenol by a UDP-glucosyltransferase from Arabidopsis thaliana. J Biol Chem 278:47905-47914. doi:10.1074/jbc. M307552200.
-
(2003)
J Biol Chem
, vol.278
, pp. 47905-47914
-
-
Poppenberger, B.1
Berthiller, F.2
Lucyshyn, D.3
Sieberer, T.4
Schuhmacher, R.5
-
61
-
-
84908047974
-
-
Wageningen UR, Accessed 12 June 2014
-
Nielen MWF, Weijers CAGM, Peters J, Weignerová L, Zuilhof H, et al. (2014) Rapid enzymatic hydrolysis of masked deoxynivalenol and zearalenone prior to liquid chromatography mass spectrometry or immuniassay analysis. Wageningen UR. Available: http://www.wageningenur.nl/de/Publicatie-details.htm?publicationId=publication-way-343533343538. Accessed 12 June 2014.
-
(2014)
Rapid Enzymatic Hydrolysis of Masked Deoxynivalenol and Zearalenone Prior to Liquid Chromatography Mass Spectrometry or Immuniassay Analysis
-
-
Nielen, M.W.F.1
Weijers, C.A.G.M.2
Peters, J.3
Weignerová, L.4
Zuilhof, H.5
-
62
-
-
79952244497
-
The genetic basis for 3-ADON and 15-ADON trichothecene chemotypes in Fusarium
-
Alexander NJ, McCormick SP, Waalwijk C, van der Lee T, Proctor RH (2011) The genetic basis for 3-ADON and 15-ADON trichothecene chemotypes in Fusarium. Fungal Genet Biol 48:485-495. doi:10.1016/j.fgb.2011.01.003.
-
(2011)
Fungal Genet Biol
, vol.48
, pp. 485-495
-
-
Alexander, N.J.1
McCormick, S.P.2
Waalwijk, C.3
Van Der Lee, T.4
Proctor, R.H.5
-
63
-
-
84857785043
-
Evolutionary origins of the fumonisin secondary metabolite gene cluster in fusarium verticillioides and aspergillus niger
-
Khaldi N, Wolfe KH (2011) Evolutionary Origins of the Fumonisin Secondary Metabolite Gene Cluster in Fusarium verticillioides and Aspergillus niger. Int J Evol Biol 2011:423821. doi:10.4061/2011/423821.
-
(2011)
Int J Evol Biol
, vol.2011
, pp. 423821
-
-
Khaldi, N.1
Wolfe, K.H.2
-
64
-
-
84863204810
-
Horizontal transfer and death of a fungal secondary metabolic gene cluster
-
Campbell MA, Rokas A, Slot JC (2012) Horizontal Transfer and Death of a Fungal Secondary Metabolic Gene Cluster. Genome Biol Evol. Available: http://dx.doi.org/10.1093/gbe/evs011.
-
(2012)
Genome Biol Evol.
-
-
Campbell, M.A.1
Rokas, A.2
Slot, J.C.3
-
65
-
-
75549086850
-
SIMAP - A comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters
-
Rattei T, Tischler P, Götz S, Jehl MA, Hoser J, et al. (2010) SIMAP - a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters. Nucleic acids research 38:D223-D226.
-
(2010)
Nucleic Acids Research
, vol.38
, pp. D223-D226
-
-
Rattei, T.1
Tischler, P.2
Götz, S.3
Jehl, M.A.4
Hoser, J.5
-
66
-
-
0028855428
-
Boty, a long-terminal-repeat retroelement in the phytopathogenic fungus Botrytis cinerea
-
Diolez A, Marches F, Fortini D, Brygoo Y (1995) Boty, a long-terminal-repeat retroelement in the phytopathogenic fungus Botrytis cinerea. Appl Environ Microbiol 61:103-108.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 103-108
-
-
Diolez, A.1
Marches, F.2
Fortini, D.3
Brygoo, Y.4
-
67
-
-
84885755731
-
Prototype of an intertwined secondary-metabolite supercluster
-
Wiemann P, Guo C-J, Palmer JM, Sekonyela R, Wang CCC, et al. (2013) Prototype of an intertwined secondary-metabolite supercluster. Proc Natl Acad Sci USA 110:17065-17070. doi:10.1073/pnas.1313258110.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 17065-17070
-
-
Wiemann, P.1
Guo, C.-J.2
Palmer, J.M.3
Sekonyela, R.4
Wang, C.C.C.5
-
68
-
-
27944479301
-
Two different polyketide synthase genes are required for synthesis of zearalenone in Gibberella zeae
-
Kim Y-T, Lee Y-R, Jin J, Han K-H, Kim H, et al. (2005) Two different polyketide synthase genes are required for synthesis of zearalenone in Gibberella zeae. Molecular Microbiology 58:1102-1113. doi:10.1111/j.1365-2958.2005.04884.x.
-
(2005)
Molecular Microbiology
, vol.58
, pp. 1102-1113
-
-
Kim, Y.-T.1
Lee, Y.-R.2
Jin J3
Han, K.-H.4
Kim, H.5
-
69
-
-
84883353135
-
Antismash 2.0-a versatile platform for genome mining of secondary metabolite producers
-
Blin K, Medema MH, Kazempour D, Fischbach MA, Breitling R, et al. (2013) antiSMASH 2.0-a versatile platform for genome mining of secondary metabolite producers. Nucleic Acids Res 41:W204-W212. doi:10.1093/nar/gkt449.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. W204-W212
-
-
Blin, K.1
Medema, M.H.2
Kazempour, D.3
Fischbach, M.A.4
Breitling, R.5
-
70
-
-
0027567737
-
Biological action of mycotoxins
-
Coulombe, R A J (1993) Biological action of mycotoxins. Journal of dairy science 76:880-891. doi:10.3168/jds. S0022-0302 (93) 77414-7.
-
(1993)
Journal of Dairy Science
, vol.76
, pp. 880-891
-
-
Coulombe, R.A.J.1
-
71
-
-
0001813291
-
Oestrogenic mycotoxins synthesized by Fusarium
-
Elsevier
-
Mirocha CJ, Christensen C (1974) Oestrogenic mycotoxins synthesized by Fusarium. Mycotoxins. Elsevier.
-
(1974)
Mycotoxins
-
-
Mirocha, C.J.1
Christensen, C.2
-
72
-
-
33644945871
-
Characterization of two polyketide synthase genes involved in zearalenone biosynthesis in Gibberella zeae
-
Gaffoor I, Trail F (2006) Characterization of two polyketide synthase genes involved in zearalenone biosynthesis in Gibberella zeae. Applied and Environmental Microbiology 72:1793-1799. doi:10.1128/AEM.72.3.1793-1799.2006.
-
(2006)
Applied and Environmental Microbiology
, vol.72
, pp. 1793-1799
-
-
Gaffoor, I.1
Trail, F.2
-
73
-
-
33745169692
-
The PKS4 gene of Fusarium graminearum is essential for zearalenone production
-
Lysøe E, Klemsdal SS, Bone KR, Frandsen RJN, Johansen T, et al. (2006) The PKS4 gene of Fusarium graminearum is essential for zearalenone production. Applied and Environmental Microbiology 72:3924-3932. doi:10.1128/AEM.00963-05.
-
(2006)
Applied and Environmental Microbiology
, vol.72
, pp. 3924-3932
-
-
Lysøe, E.1
Klemsdal, S.S.2
Bone, K.R.3
Frandsen, R.J.N.4
Johansen, T.5
-
74
-
-
0035923677
-
Regulation of cyclic peptide biosynthesis in a plant pathogenic fungus by a novel transcription factor
-
Pedley KF, Walton JD (2001) Regulation of cyclic peptide biosynthesis in a plant pathogenic fungus by a novel transcription factor. Proc Natl Acad Sci USA 98:14174-14179. doi:10.1073/pnas.231491298.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 14174-14179
-
-
Pedley, K.F.1
Walton, J.D.2
-
75
-
-
0033574753
-
Binding of the C6-zinc cluster protein, AFLR, to the promoters of aflatoxin pathway biosynthesis genes in Aspergillus parasiticus
-
Ehrlich KC, Montalbano BG, Cary JW (1999) Binding of the C6-zinc cluster protein, AFLR, to the promoters of aflatoxin pathway biosynthesis genes in Aspergillus parasiticus. Gene 230:249-257.
-
(1999)
Gene
, vol.230
, pp. 249-257
-
-
Ehrlich, K.C.1
Montalbano, B.G.2
Cary, J.W.3
-
76
-
-
0031746387
-
Sequence-specific binding by Aspergillus nidulans AflR, a C6 zinc cluster protein regulating mycotoxin biosynthesis
-
Fernandes M, Keller NP, Adams TH (1998) Sequence-specific binding by Aspergillus nidulans AflR, a C6 zinc cluster protein regulating mycotoxin biosynthesis. Molecular Microbiology 28:1355-1365.
-
(1998)
Molecular Microbiology
, vol.28
, pp. 1355-1365
-
-
Fernandes, M.1
Keller, N.P.2
Adams, T.H.3
-
78
-
-
0016610993
-
A gene cluster in Aspergillus nidulans with an internally located cis-acting regulatory region
-
Arst HN, MacDonald DW (1975) A gene cluster in Aspergillus nidulans with an internally located cis-acting regulatory region. Nature 254:26-31.
-
(1975)
Nature
, vol.254
, pp. 26-31
-
-
Arst, H.N.1
MacDonald, D.W.2
-
79
-
-
84891808382
-
JASPAR 2014: An extensively expanded and updated open-access database of transcription factor binding profiles
-
Mathelier A, Zhao X, Zhang AW, Parcy F, Worsley-Hunt R, et al. (2014) JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic Acids Res 42:D142-D147. doi:10.1093/nar/gkt997.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D142-D147
-
-
Mathelier, A.1
Zhao, X.2
Zhang, A.W.3
Parcy, F.4
Worsley-Hunt, R.5
-
80
-
-
84891806965
-
The YEASTRACT database: An upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae
-
Teixeira MC, Monteiro PT, Guerreiro JF, Gonçalves JP, Mira NP, et al. (2014) The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae. Nucleic Acids Res 42:D161-D166. doi:10.1093/nar/gkt1015.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D161-D166
-
-
Teixeira, M.C.1
Monteiro, P.T.2
Guerreiro, J.F.3
Gonçalves, J.P.4
Mira, N.P.5
-
81
-
-
0035574793
-
A genetic and biochemical approach to study trichothecene diversity in Fusarium sporotrichioides and Fusarium graminearum
-
Brown DW, McCormick SP, Alexander NJ, Proctor RH, Desjardins AE (2001) A genetic and biochemical approach to study trichothecene diversity in Fusarium sporotrichioides and Fusarium graminearum. Fungal Genetics and Biology: FG & B 32:121-133. doi:10.1006/fgbi.2001.1256.
-
(2001)
Fungal Genetics and Biology: FG & B
, vol.32
, pp. 121-133
-
-
Brown, D.W.1
McCormick, S.P.2
Alexander, N.J.3
Proctor, R.H.4
Desjardins, A.E.5
-
82
-
-
0036255107
-
Tri13 and Tri7 determine deoxynivalenol- and nivalenol-producing chemotypes of Gibberella zeae
-
Lee T, Han Y-K, Kim K-H, Yun S-H, Lee Y-W (2002) Tri13 and Tri7 determine deoxynivalenol- and nivalenol-producing chemotypes of Gibberella zeae. Applied and Environmental Microbiology 68:2148-2154.
-
(2002)
Applied and Environmental Microbiology
, vol.68
, pp. 2148-2154
-
-
Lee, T.1
Han, Y.-K.2
Kim, K.-H.3
Yun, S.-H.4
Lee, Y.-W.5
-
83
-
-
0031915374
-
Trichothecene 3-O-acetyltransferase protects both the producing organism and transformed yeast from related mycotoxins. Cloning and characterization of Tri101
-
Kimura M, Kaneko I, Komiyama M, Takatsuki A, Koshino H, et al. (1998) Trichothecene 3-O-acetyltransferase protects both the producing organism and transformed yeast from related mycotoxins. Cloning and characterization of Tri101. The Journal of Biological Chemistry 273:1654-1661.
-
(1998)
The Journal of Biological Chemistry
, vol.273
, pp. 1654-1661
-
-
Kimura, M.1
Kaneko, I.2
Komiyama, M.3
Takatsuki, A.4
Koshino, H.5
-
85
-
-
77950445336
-
Population genetic analyses of Fusarium asiaticum populations from barley suggest a recent shift favoring 3ADON producers in southern China
-
Zhang H, Zhang Z, van der Lee T, Chen WQ, Xu J, et al. (2010) Population genetic analyses of Fusarium asiaticum populations from barley suggest a recent shift favoring 3ADON producers in southern China. Phytopathology 100:328-336. doi:10.1094/PHYTO-100-4-0328.
-
(2010)
Phytopathology
, vol.100
, pp. 328-336
-
-
Zhang, H.1
Zhang, Z.2
Van Der Lee, T.3
Chen, W.Q.4
Xu, J.5
-
86
-
-
79960656789
-
Fusarium graminearum forms mycotoxin producing infection structures on wheat
-
Boenisch MJ, Schäfer W (2011) Fusarium graminearum forms mycotoxin producing infection structures on wheat. BMC Plant Biol 11:110. doi:10.1186/1471-2229-11-110.
-
(2011)
BMC Plant Biol
, vol.11
, pp. 110
-
-
Boenisch, M.J.1
Schäfer, W.2
-
87
-
-
77953210666
-
Validation of a candidate deoxynivalenol-inactivating UDP-glucosyltransferase from barley by heterologous expression in yeast
-
Schweiger W, Boddu J, Shin S, Poppenberger B, Berthiller F, et al. (2010) Validation of a candidate deoxynivalenol-inactivating UDP-glucosyltransferase from barley by heterologous expression in yeast. Molecular plant-microbe interactions: MPMI 23:977-986. doi:10.1094/MPMI-23-7-0977.
-
(2010)
Molecular Plant-microbe Interactions: MPMI
, vol.23
, pp. 977-986
-
-
Schweiger, W.1
Boddu, J.2
Shin, S.3
Poppenberger, B.4
Berthiller, F.5
-
88
-
-
84880371915
-
Cross-kingdom gene transfer facilitates the evolution of virulence in fungal pathogens
-
Gardiner DM, Kazan K, Manners JM (2013) Cross-kingdom gene transfer facilitates the evolution of virulence in fungal pathogens. Plant Science 210:151-158. doi:10.1016/j.plantsci.2013.06.002.
-
(2013)
Plant Science
, vol.210
, pp. 151-158
-
-
Gardiner, D.M.1
Kazan, K.2
Manners, J.M.3
-
89
-
-
84884932088
-
Repeated loss of an anciently horizontally transferred gene cluster in Botrytis
-
Accessed 2 September 2013
-
Campbell MA, Staats M, Kan JV, Rokas A, Slot JC (2013) Repeated loss of an anciently horizontally transferred gene cluster in Botrytis. Mycologia. Available: http://www.mycologia.org/content/early/2013/08/06/12-390. Accessed 2 September 2013.
-
(2013)
Mycologia
-
-
Campbell, M.A.1
Staats, M.2
Kan, J.V.3
Rokas, A.4
Slot, J.C.5
-
90
-
-
84860320614
-
The complete genome of Bacillus amyloliquefaciens subsp plantarum CAU B946 contains a gene cluster for nonribosomal synthesis of iturin A
-
Blom J, Rueckert C, Niu B, Wang Q, Borriss R (2012) The complete genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 contains a gene cluster for nonribosomal synthesis of iturin A. J Bacteriol 194:1845-1846. doi:10.1128/JB.06762-11.
-
(2012)
J Bacteriol
, vol.194
, pp. 1845-1846
-
-
Blom, J.1
Rueckert, C.2
Niu, B.3
Wang, Q.4
Borriss, R.5
-
91
-
-
0034800374
-
InterProScan-an integration platform for the signature-recognition methods in InterPro
-
Zdobnov EM, Apweiler R (2001) InterProScan-an integration platform for the signature-recognition methods in InterPro. Bioinformatics 17:847-848.
-
(2001)
Bioinformatics
, vol.17
, pp. 847-848
-
-
Zdobnov, E.M.1
Apweiler, R.2
-
93
-
-
58149197598
-
PEDANT covers all complete RefSeq genomes
-
Walter MC, Rattei T, Arnold R, Güldener U, Münsterkötter M, et al. (2009) PEDANT covers all complete RefSeq genomes. Nucleic Acids Res 37:408-411. doi:10.1093/nar/gkn749.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 408-411
-
-
Walter, M.C.1
Rattei, T.2
Arnold, R.3
Güldener, U.4
Münsterkötter, M.5
-
94
-
-
1342288026
-
Affy-analysis of Affymetrix GeneChip data at the probe level
-
Gautier L, Cope L, Bolstad BM, Irizarry RA (2004) affy-analysis of Affymetrix GeneChip data at the probe level. Bioinformatics 20:307-315. doi: http://dx.doi.org/10.1093/bioinformatics/btg405.
-
(2004)
Bioinformatics
, vol.20
, pp. 307-315
-
-
Gautier, L.1
Cope, L.2
Bolstad, B.M.3
Irizarry, R.A.4
-
95
-
-
33644872577
-
Limma: Linear models for microarray data
-
Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W, editors, New York: Springer
-
Smyth GK (2005) Limma: linear models for microarray data. In: Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W, editors. Bioinformatics and Computational Biology Solutions using R and Bioconductor. New York: Springer. pp. 397-420.
-
(2005)
Bioinformatics and Computational Biology Solutions Using R and Bioconductor
, pp. 397-420
-
-
Smyth, G.K.1
-
96
-
-
33747823564
-
MEME: Discovering and analyzing DNA and protein sequence motifs
-
Bailey T, Williams N, Misleh C, Li W (2006) MEME: discovering and analyzing DNA and protein sequence motifs. Nucleic acids research 34:W369-W373. doi:10.1093/nar/gkl198.
-
(2006)
Nucleic Acids Research
, vol.34
, pp. W369-W373
-
-
Bailey, T.1
Williams, N.2
Misleh, C.3
Li, W.4
-
97
-
-
3242884167
-
Weeder Web: Discovery of transcription factor binding sites in a set of sequences from co-regulated genes
-
Pavesi G, Mereghetti P, Mauri G, Pesole G (2004) Weeder Web: discovery of transcription factor binding sites in a set of sequences from co-regulated genes. Nucleic acids research 3:W199.
-
(2004)
Nucleic Acids Research
, vol.3
, pp. W199
-
-
Pavesi, G.1
Mereghetti, P.2
Mauri, G.3
Pesole, G.4
-
98
-
-
0344906814
-
Combining phylogenetic data with co-regulated genes to identify regulatory motifs
-
Wang T, Stormo GD (2003) Combining phylogenetic data with co-regulated genes to identify regulatory motifs. Bioinformatics 19:2369-2380.
-
(2003)
Bioinformatics
, vol.19
, pp. 2369-2380
-
-
Wang, T.1
Stormo, G.D.2
-
99
-
-
0035172256
-
The TRANSFAC system on gene expression regulation
-
Wingender E, Chen X, Fricke E, Geffers R, Hehl R, et al. (2001) The TRANSFAC system on gene expression regulation. Nucleic acids research 29:281-283.
-
(2001)
Nucleic Acids Research
, vol.29
, pp. 281-283
-
-
Wingender, E.1
Chen, X.2
Fricke, E.3
Geffers, R.4
Hehl, R.5
-
102
-
-
23844525077
-
Repbase Update, a database of eukaryotic repetitive elements
-
Jurka J, Kapitonov V, Pavlicek A, Klonowski P, Kohany O, et al. (2005) Repbase Update, a database of eukaryotic repetitive elements. Cytogenetic and genome research 110:462-467.
-
(2005)
Cytogenetic and Genome Research
, vol.110
, pp. 462-467
-
-
Jurka, J.1
Kapitonov, V.2
Pavlicek, A.3
Klonowski, P.4
Kohany, O.5
-
104
-
-
11044236499
-
Rapid simultaneous determination of major type A- and B-trichothecenes as well as zearalenone in maize by high performance liquid chromatography-tandem mass spectrometry
-
Berthiller F, Schuhmacher R, Buttinger G, Krska R (2005) Rapid simultaneous determination of major type A- and B-trichothecenes as well as zearalenone in maize by high performance liquid chromatography-tandem mass spectrometry. J Chromatogr A 1062:209-216.
-
(2005)
J Chromatogr A
, vol.1062
, pp. 209-216
-
-
Berthiller, F.1
Schuhmacher, R.2
Buttinger, G.3
Krska, R.4
-
105
-
-
33646805713
-
Depletion of intracellular glutathione mediates butenolide-induced cytotoxicity in HepG2 cells
-
Wang Y-M, Peng S-Q, Zhou Q, Wang M-W, Yan C-H, et al. (2006) Depletion of intracellular glutathione mediates butenolide-induced cytotoxicity in HepG2 cells. Toxicology letters 164:231-238. doi:10.1016/j.toxlet.2006.01.002.
-
(2006)
Toxicology Letters
, vol.164
, pp. 231-238
-
-
Wang, Y.-M.1
Peng, S.-Q.2
Zhou, Q.3
Wang, M.-W.4
Yan, C.-H.5
-
106
-
-
74049111520
-
Characterization of carotenoid biosynthetic genes in the ascomycete Gibberella zeae
-
Jin J-M, Lee J, Lee Y-W (2010) Characterization of carotenoid biosynthetic genes in the ascomycete Gibberella zeae. FEMS Microbiol Lett 302:197-202. doi:10.1111/j.1574-6968.2009.01854.x.
-
(2010)
FEMS Microbiol Lett
, vol.302
, pp. 197-202
-
-
Jin, J.-M.1
Lee, J.2
Lee, Y.-W.3
-
107
-
-
0018896099
-
Malonichrome, a new iron chelate from Fusarium roseum
-
Emery T (1980) Malonichrome, a new iron chelate from Fusarium roseum. Biochimica et biophysica acta 629:382-390.
-
(1980)
Biochimica et Biophysica Acta
, vol.629
, pp. 382-390
-
-
Emery, T.1
-
108
-
-
33845291462
-
Nonribosomal peptide synthetase (NPS) genes in Fusarium graminearum, F culmorum and F pseudograminearium and identification of NPS2 as the producer of ferricrocin
-
Tobiasen C, Aahman J, Ravnholt KS, Bjerrum MJ, Grell MN, et al. (2007) Nonribosomal peptide synthetase (NPS) genes in Fusarium graminearum, F. culmorum and F. pseudograminearium and identification of NPS2 as the producer of ferricrocin. Current Genetics 51:43-58. doi:10.1007/s00294-006-0103-0.
-
(2007)
Current Genetics
, vol.51
, pp. 43-58
-
-
Tobiasen, C.1
Aahman, J.2
Ravnholt, K.S.3
Bjerrum, M.J.4
Grell, M.N.5
-
109
-
-
33750981838
-
NPS6, encoding a nonribosomal peptide synthetase involved in siderophore-mediated iron metabolism, is a conserved virulence determinant of plant pathogenic ascomycetes
-
Oide S, Moeder W, Krasnoff S, Gibson D, Haas H, et al. (2006) NPS6, encoding a nonribosomal peptide synthetase involved in siderophore-mediated iron metabolism, is a conserved virulence determinant of plant pathogenic ascomycetes. The Plant Cell 18:2836-2853. doi:10.1105/tpc.106.045633.
-
(2006)
The Plant Cell
, vol.18
, pp. 2836-2853
-
-
Oide, S.1
Moeder, W.2
Krasnoff, S.3
Gibson, D.4
Haas, H.5
-
110
-
-
34748922237
-
Functional characterization, sequence comparisons and distribution of a polyketide synthase gene required for perithecial pigmentation in some Fusarium species
-
Proctor RH, Butchko RAE, Brown DW, Moretti A (2007) Functional characterization, sequence comparisons and distribution of a polyketide synthase gene required for perithecial pigmentation in some Fusarium species. Food additives and contaminants 24:1076-1087. doi:10.1080/02652030701546495.
-
(2007)
Food Additives and Contaminants
, vol.24
, pp. 1076-1087
-
-
Proctor, R.H.1
Butchko, R.A.E.2
Brown, D.W.3
Moretti, A.4
-
111
-
-
84883191890
-
Genetic manipulation of the fusarium fujikuroi fusarin gene cluster yields insight into the complex regulation and fusarin biosynthetic pathway
-
Niehaus E-M, Kleigrewe K, Wiemann P, Studt L, Sieber CMK, et al. (2013) Genetic Manipulation of the Fusarium fujikuroi Fusarin Gene Cluster Yields Insight into the Complex Regulation and Fusarin Biosynthetic Pathway. Chem Biol. doi:10.1016/j.chembiol.2013.07.004.
-
(2013)
Chem Biol
-
-
Niehaus, E.-M.1
Kleigrewe, K.2
Wiemann, P.3
Studt, L.4
Sieber, C.M.K.5
-
112
-
-
0035748338
-
Effect of the mycotoxin aurofusarin on the antioxidant composition and fatty acid profile of quail eggs
-
Dvorska JE, Surai PF, Speake BK, Sparks NH (2001) Effect of the mycotoxin aurofusarin on the antioxidant composition and fatty acid profile of quail eggs. British Poultry Science 42:643-649.
-
(2001)
British Poultry Science
, vol.42
, pp. 643-649
-
-
Dvorska, J.E.1
Surai, P.F.2
Speake, B.K.3
Sparks, N.H.4
-
113
-
-
33746523463
-
The biosynthetic pathway for aurofusarin in Fusarium graminearum reveals a close link between the naphthoquinones and naphthopyrones
-
Frandsen RJN, Nielsen NJ, Maolanon N, Sørensen JC, Olsson S, et al. (2006) The biosynthetic pathway for aurofusarin in Fusarium graminearum reveals a close link between the naphthoquinones and naphthopyrones. Molecular Microbiology 61:1069-1080. doi:10.1111/j.1365-2958.2006.05295.x.
-
(2006)
Molecular Microbiology
, vol.61
, pp. 1069-1080
-
-
Frandsen, R.J.N.1
Nielsen, N.J.2
Maolanon, N.3
Sørensen, J.C.4
Olsson, S.5
-
114
-
-
33144490289
-
GIP2, a putative transcription factor that regulates the aurofusarin biosynthetic gene cluster in Gibberella zeae
-
Kim J-E, Jin J, Kim H, Kim J-C, Yun S-H, et al. (2006) GIP2, a putative transcription factor that regulates the aurofusarin biosynthetic gene cluster in Gibberella zeae. Applied and Environmental Microbiology 72:1645-1652. doi:10.1128/AEM.72.2.1645-1652.2006.
-
(2006)
Applied and Environmental Microbiology
, vol.72
, pp. 1645-1652
-
-
Kim, J.-E.1
Jin, J.2
Kim, H.3
Kim, J.-C.4
Yun, S.-H.5
-
115
-
-
17444365105
-
Putative polyketide synthase and laccase genes for biosynthesis of aurofusarin in Gibberella zeae
-
Kim J-E, Han K-H, Jin J, Kim H, Kim J-C, et al. (2005) Putative polyketide synthase and laccase genes for biosynthesis of aurofusarin in Gibberella zeae. Applied and environmental microbiology 71:1701-1708. doi:10.1128/AEM.71.4.1701-1708.2005.
-
(2005)
Applied and Environmental Microbiology
, vol.71
, pp. 1701-1708
-
-
Kim, J.-E.1
Han, K.-H.2
Jin, J.3
Kim, H.4
Kim, J.-C.5
-
116
-
-
84904889734
-
Fusarium graminearum PKS14 is involved in orsellinic acid and orcinol synthesis
-
Jørgensen SH, Frandsen RJN, Nielsen KF, Lysøe E, Sondergaard TE, et al. (2014) Fusarium graminearum PKS14 is involved in orsellinic acid and orcinol synthesis. Fungal Genet Biol 70C: 24-31. doi:10.1016/j.fgb.2014.06.008.
-
(2014)
Fungal Genet Biol
, vol.70 C
, pp. 24-31
-
-
Jørgensen, S.H.1
Frandsen, R.J.N.2
Nielsen, K.F.3
Lysøe, E.4
Sondergaard, T.E.5
-
117
-
-
76149085865
-
CLM1 of Fusarium graminearum encodes a longiborneol synthase required for culmorin production
-
McCormick SP, Alexander NJ, Harris LJ (2010) CLM1 of Fusarium graminearum encodes a longiborneol synthase required for culmorin production. Applied and environmental microbiology 76:136-141. doi:10.1128/AEM.02017-09.
-
(2010)
Applied and Environmental Microbiology
, vol.76
, pp. 136-141
-
-
McCormick, S.P.1
Alexander, N.J.2
Harris, L.J.3
|