-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
1242319544
-
Evolution of the MAT locus and its Ho endonuclease in yeast species
-
Butler G, Kenny C, Fagan A, Kurischko C, Gaillardin C, et al. (2004) Evolution of the MAT locus and its Ho endonuclease in yeast species. Proc Natl Acad Sci U S A 101: 1632-1637.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 1632-1637
-
-
Butler, G.1
Kenny, C.2
Fagan, A.3
Kurischko, C.4
Gaillardin, C.5
-
3
-
-
0029121526
-
Construction and characterization of a bovine bacterial artificial chromosome library
-
Cai L, Taylor JF, Wing RA, Gallagher DS, Woo SS, et al. (1995) Construction and characterization of a bovine bacterial artificial chromosome library. Genomics 29: 413-425.
-
(1995)
Genomics
, vol.29
, pp. 413-425
-
-
Cai, L.1
Taylor, J.F.2
Wing, R.A.3
Gallagher, D.S.4
Woo, S.S.5
-
4
-
-
0031888793
-
Molecular genetics of mating recognition in basidiomycete fungi
-
Casselton LA, Olesnicky NS (1998) Molecular genetics of mating recognition in basidiomycete fungi. Microbiol Mol Biol Rev 62: 55-70.
-
(1998)
Microbiol Mol Biol Rev
, vol.62
, pp. 55-70
-
-
Casselton, L.A.1
Olesnicky, N.S.2
-
5
-
-
0034164603
-
A new approach for the identification and cloning of genes: The pBACwich system using Cre/lox site-specific recombination
-
Choi S, Begum D, Koshinsky H, Ow DW, Wing RA (2000) A new approach for the identification and cloning of genes: The pBACwich system using Cre/lox site-specific recombination. Nucleic Acids Res 28: E19.
-
(2000)
Nucleic Acids Res
, vol.28
-
-
Choi, S.1
Begum, D.2
Koshinsky, H.3
Ow, D.W.4
Wing, R.A.5
-
6
-
-
0031440968
-
Fungal transposable elements and genome evolution
-
Daboussi MJ (1997) Fungal transposable elements and genome evolution. Genetica 100: 253-260.
-
(1997)
Genetica
, vol.100
, pp. 253-260
-
-
Daboussi, M.J.1
-
7
-
-
0037058930
-
Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae
-
Dunham MJ, Badrane H, Ferea T, Adams J, Brown PO, et al. (2002) Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 99: 16144-16149.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 16144-16149
-
-
Dunham, M.J.1
Badrane, H.2
Ferea, T.3
Adams, J.4
Brown, P.O.5
-
8
-
-
0031978181
-
Base-calling of automated sequencer traces using phred. II. Error probabilities
-
Ewing B, Green P (1998) Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8: 186-194.
-
(1998)
Genome Res
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
9
-
-
0142216112
-
Recapitulation of the sexual cycle of the primary fungal pathogen Cryptococcus neoformans var. gattii. Implications for an outbreak on Vancouver Island, Canada
-
Fraser JA, Subaran RL, Nichols CB, Heitman J (2003) Recapitulation of the sexual cycle of the primary fungal pathogen Cryptococcus neoformans var. gattii Implications for an outbreak on Vancouver Island, Canada. Eukaryot Cell 2: 1036-1045.
-
(2003)
Eukaryot Cell
, vol.2
, pp. 1036-1045
-
-
Fraser, J.A.1
Subaran, R.L.2
Nichols, C.B.3
Heitman, J.4
-
10
-
-
0034929551
-
The diversity of retrotransposons in the yeast Cryptococcus neoformans
-
Goodwin TJ, Poulter RT (2001) The diversity of retrotransposons in the yeast Cryptococcus neoformans. Yeast 18: 865-880.
-
(2001)
Yeast
, vol.18
, pp. 865-880
-
-
Goodwin, T.J.1
Poulter, R.T.2
-
11
-
-
0344012045
-
Cryptons: A group of tyrosine-recombinase-encoding DNA transposons from pathogenic fungi
-
Goodwin TJ, Butler MI, Poulter RT (2003) Cryptons: A group of tyrosine-recombinase-encoding DNA transposons from pathogenic fungi. Microbiology 149: 3099-3109.
-
(2003)
Microbiology
, vol.149
, pp. 3099-3109
-
-
Goodwin, T.J.1
Butler, M.I.2
Poulter, R.T.3
-
12
-
-
0031955116
-
Consed: A graphical tool for sequence finishing
-
Gordon D, Abajian C, Green P (1998) Consed: A graphical tool for sequence finishing. Genome Res 8: 195-202.
-
(1998)
Genome Res
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
13
-
-
1642443161
-
Repairing a double-strand chromosome break by homologous recombination: Revisiting Robin Holliday's model
-
Haber JE, Ira G, Malkova A, Sugawara N (2004) Repairing a double-strand chromosome break by homologous recombination: Revisiting Robin Holliday's model. Philos Trans R Soc Lond B Biol Sci 359: 79-86.
-
(2004)
Philos Trans R Soc Lond B Biol Sci
, vol.359
, pp. 79-86
-
-
Haber, J.E.1
Ira, G.2
Malkova, A.3
Sugawara, N.4
-
14
-
-
0024788838
-
A regulatory hierarchy for cell specialization in yeast
-
Herskowitz I (1989) A regulatory hierarchy for cell specialization in yeast. Nature 342: 749-757.
-
(1989)
Nature
, vol.342
, pp. 749-757
-
-
Herskowitz, I.1
-
15
-
-
0020447816
-
Selfish DNA: A sexually-transmitted nuclear parasite
-
Hickey DA (1982) Selfish DNA: A sexually-transmitted nuclear parasite. Genetics 101: 519-531.
-
(1982)
Genetics
, vol.101
, pp. 519-531
-
-
Hickey, D.A.1
-
16
-
-
0026696154
-
Commitment to meiosis in Saccharomyces cerevisiae. Involvement of the SPO14 gene
-
Honigberg SM, Conicella C, Esposito RE (1992) Commitment to meiosis in Saccharomyces cerevisiae Involvement of the SPO14 gene. Genetics 130: 703-716.
-
(1992)
Genetics
, vol.130
, pp. 703-716
-
-
Honigberg, S.M.1
Conicella, C.2
Esposito, R.E.3
-
17
-
-
0036948447
-
Genetics of Cryptococcus neoformans
-
Hull CM, Heitman J (2002) Genetics of Cryptococcus neoformans. Annu Rev Genet 36: 557-615.
-
(2002)
Annu Rev Genet
, vol.36
, pp. 557-615
-
-
Hull, C.M.1
Heitman, J.2
-
18
-
-
0038561163
-
The amelogenin loci span an ancient pseudoautosomal boundary in diverse mammalian species
-
Iwase M, Satta Y, Hirai Y, Hirai H, Imai H, et al. (2003) The amelogenin loci span an ancient pseudoautosomal boundary in diverse mammalian species. Proc Natl Acad Sci U S A 100: 5258-5263.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 5258-5263
-
-
Iwase, M.1
Satta, Y.2
Hirai, Y.3
Hirai, H.4
Imai, H.5
-
20
-
-
1542513556
-
Mobile elements: Drivers of genome evolution
-
Kazazian HH (2004) Mobile elements: Drivers of genome evolution. Science 303: 1626-1632.
-
(2004)
Science
, vol.303
, pp. 1626-1632
-
-
Kazazian, H.H.1
-
21
-
-
0031453252
-
Mating type in filamentous fungi
-
Kronstad JW, Staben C (1997) Mating type in filamentous fungi. Annu Rev Genet 31: 245-276.
-
(1997)
Annu Rev Genet
, vol.31
, pp. 245-276
-
-
Kronstad, J.W.1
Staben, C.2
-
22
-
-
0026334016
-
Genetic association of mating types and virulence in Cryptococcus neoformans
-
Kwon-Chung KJ, Edman JC, Wickes BL (1992) Genetic association of mating types and virulence in Cryptococcus neoformans. Infect Immun 60: 602-605.
-
(1992)
Infect Immun
, vol.60
, pp. 602-605
-
-
Kwon-Chung, K.J.1
Edman, J.C.2
Wickes, B.L.3
-
23
-
-
0036881280
-
Proposal to conserve the name Cryptococcus gattii against C. hondurianus and C. bacillisporus (Basidiomycota, Hymenomycetes, Tremellomycetiadae)
-
Kwon-Chung KJ, Boekhout T, Fell JW, Diaz M (2002) Proposal to conserve the name Cryptococcus gattii against C. hondurianus and C. bacillisporus (Basidiomycota, Hymenomycetes, Tremellomycetiadae). Taxon 51: 804-806.
-
(2002)
Taxon
, vol.51
, pp. 804-806
-
-
Kwon-Chung, K.J.1
Boekhout, T.2
Fell, J.W.3
Diaz, M.4
-
24
-
-
0033615708
-
Four evolutionary strata on the human X chromosome
-
Lahn BT, Page DC (1999) Four evolutionary strata on the human X chromosome. Science 286: 964-967.
-
(1999)
Science
, vol.286
, pp. 964-967
-
-
Lahn, B.T.1
Page, D.C.2
-
25
-
-
0033592862
-
The mating-type and pathogenicity locus of the fungus Ustilago hordei spans a 500-kb region
-
Lee N, Bakkeren G, Wong K, Sherwood JE, Kronstad JW (1999) The mating-type and pathogenicity locus of the fungus Ustilago hordei spans a 500-kb region. Proc Natl Acad Sci U S A 96: 15026-15031.
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 15026-15031
-
-
Lee, N.1
Bakkeren, G.2
Wong, K.3
Sherwood, J.E.4
Kronstad, J.W.5
-
26
-
-
0036778017
-
Mating-type locus of Cryptococcus neoformans. A step in the evolution of sex chromosomes
-
Lengeler KB, Fox DS, Fraser JA, Allen A, Forrester K, et al. (2002) Mating-type locus of Cryptococcus neoformans A step in the evolution of sex chromosomes. Eukaryot Cell 1: 704-718.
-
(2002)
Eukaryot Cell
, vol.1
, pp. 704-718
-
-
Lengeler, K.B.1
Fox, D.S.2
Fraser, J.A.3
Allen, A.4
Forrester, K.5
-
27
-
-
0027403961
-
Unbiased estimation of the rates of synonymous and nonsynonymous substitution
-
Li WH (1993) Unbiased estimation of the rates of synonymous and nonsynonymous substitution. J Mol Evol 36: 96-99.
-
(1993)
J Mol Evol
, vol.36
, pp. 96-99
-
-
Li, W.H.1
-
28
-
-
9144264159
-
A primitive Y chromosome in papaya marks incipient sex chromosome evolution
-
Liu Z, Moore PH, Ma H, Ackerman CM, Ragiba M, et al. (2004) A primitive Y chromosome in papaya marks incipient sex chromosome evolution. Nature 427: 348-352.
-
(2004)
Nature
, vol.427
, pp. 348-352
-
-
Liu, Z.1
Moore, P.H.2
Ma, H.3
Ackerman, C.M.4
Ragiba, M.5
-
30
-
-
0342614926
-
Codon usage tabulated from international DNA sequence databases: Status for the year 2000
-
Nakamura Y, Gojobori T, Ikemura T (2000) Codon usage tabulated from international DNA sequence databases: Status for the year 2000. Nucleic Acids Res 28: 292.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 292
-
-
Nakamura, Y.1
Gojobori, T.2
Ikemura, T.3
-
31
-
-
0029850017
-
Efficient random subcloning of DNA sheared in a recirculating point-sink flow system
-
Oefner PJ, Hunicke-Smith SP, Chiang L, Dietrich F, Mulligan J, et al. (1996) Efficient random subcloning of DNA sheared in a recirculating point-sink flow system. Nucleic Acids Res 24: 3879-3886.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 3879-3886
-
-
Oefner, P.J.1
Hunicke-Smith, S.P.2
Chiang, L.3
Dietrich, F.4
Mulligan, J.5
-
32
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
Posada D, Crandall KA (1998) MODELTEST: Testing the model of DNA substitution. Bioinformatics 14: 817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
33
-
-
0033820524
-
A protein with similarity to the human retinoblastoma binding protein 2 acts specifically as a repressor for genes regulated by the b mating type locus in Ustilago maydis
-
Quadbeck-Seeger C, Wanner G, Huber S, Kahmann R, Kamper J (2000) A protein with similarity to the human retinoblastoma binding protein 2 acts specifically as a repressor for genes regulated by the b mating type locus in Ustilago maydis. Mol Microbiol 38: 154-166.
-
(2000)
Mol Microbiol
, vol.38
, pp. 154-166
-
-
Quadbeck-Seeger, C.1
Wanner, G.2
Huber, S.3
Kahmann, R.4
Kamper, J.5
-
34
-
-
0032972599
-
DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
-
Rozas J, Rozas R (1999) DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15: 174-175.
-
(1999)
Bioinformatics
, vol.15
, pp. 174-175
-
-
Rozas, J.1
Rozas, R.2
-
35
-
-
0037967231
-
Abundant gene conversion between arms of palindromes in human and ape Y chromosomes
-
Rozen S, Skaletsky H, Marszalek JD, Minx PJ, Cordum HS, et al. (2003) Abundant gene conversion between arms of palindromes in human and ape Y chromosomes. Nature 423: 873-876.
-
(2003)
Nature
, vol.423
, pp. 873-876
-
-
Rozen, S.1
Skaletsky, H.2
Marszalek, J.D.3
Minx, P.J.4
Cordum, H.S.5
-
37
-
-
14344273992
-
Prevalence of small inversions in yeast gene order evolution
-
Seoighe C, Federspiel N, Jones T, Hansen N, Bivolarovic V, et al. (2000) Prevalence of small inversions in yeast gene order evolution. Proc Natl Acad Sci U S A 97: 14433-14437.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 14433-14437
-
-
Seoighe, C.1
Federspiel, N.2
Jones, T.3
Hansen, N.4
Bivolarovic, V.5
-
38
-
-
0032766857
-
Multiple comparisons of log-likelihoods with applications to phylogenetic inference
-
Shimodaira H, Hasegawa M (1999) Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol Biol Evol 16: 1114-1116.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 1114-1116
-
-
Shimodaira, H.1
Hasegawa, M.2
-
39
-
-
0037967242
-
The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes
-
Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al. (2003) The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. Nature 423: 825-837.
-
(2003)
Nature
, vol.423
, pp. 825-837
-
-
Skaletsky, H.1
Kuroda-Kawaguchi, T.2
Minx, P.J.3
Cordum, H.S.4
Hillier, L.5
-
40
-
-
0018386889
-
Asymmetry and directionality in production of new cell types during clonal growth: The switching pattern of homothallic yeast
-
Strathern JN, Herskowitz I (1979) Asymmetry and directionality in production of new cell types during clonal growth: The switching pattern of homothallic yeast. Cell 17: 371-381.
-
(1979)
Cell
, vol.17
, pp. 371-381
-
-
Strathern, J.N.1
Herskowitz, I.2
-
42
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
43
-
-
0344827287
-
Evolution of a combinatorial transcriptional circuit: A case study in yeasts
-
Tsong AE, Miller MG, Raisner RM, Johnson AD (2003) Evolution of a combinatorial transcriptional circuit: a case study in yeasts. Cell 115: 389-399.
-
(2003)
Cell
, vol.115
, pp. 389-399
-
-
Tsong, A.E.1
Miller, M.G.2
Raisner, R.M.3
Johnson, A.D.4
-
44
-
-
1542563409
-
Initial sequencing and comparative analysis of the mouse genome
-
Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al. (2002) Initial sequencing and comparative analysis of the mouse genome. Nature 420: 520-562.
-
(2002)
Nature
, vol.420
, pp. 520-562
-
-
Waterston, R.H.1
Lindblad-Toh, K.2
Birney, E.3
Rogers, J.4
Abril, J.F.5
-
45
-
-
0029951165
-
Dimorphism and haploid fruiting in Cryptococcus neoformansassociation with the alpha-mating type
-
Wickes BL, Mayorga ME, Edman U, Edman JC (1996) Dimorphism and haploid fruiting in Cryptococcus neoformansassociation with the alpha-mating type. Proc Natl Acad Sci U S A 93: 7327-7331.
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 7327-7331
-
-
Wickes, B.L.1
Mayorga, M.E.2
Edman, U.3
Edman, J.C.4
-
46
-
-
0030592510
-
A 700 bp cis-acting region controls mating-type dependent recombination along the entire left arm of yeast chromosome III
-
Wu X, Haber JE (1996) A 700 bp cis-acting region controls mating-type dependent recombination along the entire left arm of yeast chromosome III. Cell 87: 277-285.
-
(1996)
Cell
, vol.87
, pp. 277-285
-
-
Wu, X.1
Haber, J.E.2
-
47
-
-
0033675677
-
Multiple gene genealogies reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans
-
Xu J, Vilgalys R, Mitchell TG (2000) Multiple gene genealogies reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans. Mol Ecol 9: 1471-1481.
-
(2000)
Mol Ecol
, vol.9
, pp. 1471-1481
-
-
Xu, J.1
Vilgalys, R.2
Mitchell, T.G.3
|