-
1
-
-
0034665853
-
Bacterial rhodopsin: Evidence for a new type of phototrophy in the sea
-
Béjà O, et al. (2000) Bacterial rhodopsin: Evidence for a new type of phototrophy in the sea. Science 289(5486):1902-1906.
-
(2000)
Science
, vol.289
, Issue.5486
, pp. 1902-1906
-
-
Béjà, O.1
-
2
-
-
0035859080
-
Proteorhodopsin phototrophy in the ocean
-
DOI 10.1038/35081051
-
Béjà O, Spudich EN, Spudich JL, Leclerc M, DeLong EF (2001) Proteorhodopsin phototrophy in the ocean. Nature 411(6839):786-789. (Pubitemid 32588098)
-
(2001)
Nature
, vol.411
, Issue.6839
, pp. 786-789
-
-
Beja, O.1
Spudich, E.N.2
Spudich, J.L.3
Leclerc, M.4
DeLong, E.F.5
-
3
-
-
0242331634
-
Proteorhodopsin genes are distributed among divergent marine bacterial taxa
-
de la Torre JR, et al. (2003) Proteorhodopsin genes are distributed among divergent marine bacterial taxa. Proc Natl Acad Sci USA 100(22):12830-12835.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.22
, pp. 12830-12835
-
-
De La Torre, J.R.1
-
4
-
-
4344584482
-
Different SAR86 subgroups harbour divergent proteorhodopsins
-
DOI 10.1111/j.1462-2920.2004.00676.x
-
Sabehi G, Béjà O, Suzuki MT, Preston CM, DeLong EF (2004) Different SAR86 subgroups harbour divergent proteorhodopsins. Environ Microbiol 6(9):903-910. (Pubitemid 39123244)
-
(2004)
Environmental Microbiology
, vol.6
, Issue.9
, pp. 903-910
-
-
Sabehi, G.1
Beja, O.2
Suzuki, M.T.3
Preston, C.M.4
DeLong, E.F.5
-
5
-
-
0141676335
-
Novel proteorhodopsin variants from the Mediterranean and Red Seas
-
DOI 10.1046/j.1462-2920.2003.00493.x
-
Sabehi G, et al. (2003) Novel Proteorhodopsin variants from the Mediterranean and Red Seas. Environ Microbiol 5(10):842-849. (Pubitemid 37181554)
-
(2003)
Environmental Microbiology
, vol.5
, Issue.10
, pp. 842-849
-
-
Sabehi, G.1
Massana, R.2
Bielawski, J.P.3
Rosenberg, M.4
Delong, E.F.5
Beja, O.6
-
6
-
-
33947238287
-
The Sorcerer II Global Ocean Sampling expedition: Northwest Atlantic through eastern tropical Pacific
-
Rusch DB, et al. (2007) The Sorcerer II Global Ocean Sampling expedition: Northwest Atlantic through eastern tropical Pacific. PLoS Biol 5(3):e77.
-
(2007)
PLoS Biol
, vol.5
, Issue.3
-
-
Rusch, D.B.1
-
7
-
-
84872931134
-
Global abundance of microbial rhodopsins
-
Finkel OM, Béjà O, Belkin S (2013) Global abundance of microbial rhodopsins. ISME J 7(2):448-451.
-
(2013)
ISME J
, vol.7
, Issue.2
, pp. 448-451
-
-
Finkel, O.M.1
Béjà, O.2
Belkin, S.3
-
8
-
-
41649114407
-
Microbial community gene expression in ocean surface waters
-
DOI 10.1073/pnas.0708897105
-
Frias-Lopez J, et al. (2008) Microbial community gene expression in ocean surface waters. Proc Natl Acad Sci USA 105(10):3805-3810. (Pubitemid 351723480)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.10
, pp. 3805-3810
-
-
Frias-Lopez, J.1
Shi, Y.2
Tyson, G.W.3
Coleman, M.L.4
Schuster, S.C.5
Chisholm, S.W.6
DeLong, E.F.7
-
9
-
-
27744438187
-
Proteorhodopsin in the ubiquitous marine bacterium SAR11
-
DOI 10.1038/nature04032, PII N04032
-
Giovannoni SJ, et al. (2005) Proteorhodopsin in the ubiquitous marine bacterium SAR11. Nature 438(7064):82-85. (Pubitemid 41599823)
-
(2005)
Nature
, vol.438
, Issue.7064
, pp. 82-85
-
-
Giovannoni, S.J.1
Bibbs, L.2
Cho, J.-C.3
Stapels, M.D.4
Desiderio, R.5
Vergin, K.L.6
Rappe, M.S.7
Laney, S.8
Wilhelm, L.J.9
Tripp, H.J.10
Mathur, E.J.11
Barofsky, D.F.12
-
10
-
-
77952279613
-
Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsin-producing microbial community in the North Sea
-
Riedel T, et al. (2010) Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsin-producing microbial community in the North Sea. Appl Environ Microbiol 76(10):3187-3197.
-
(2010)
Appl Environ Microbiol
, vol.76
, Issue.10
, pp. 3187-3197
-
-
Riedel, T.1
-
11
-
-
33846238031
-
Light stimulates growth of proteorhodopsin-containing marine Flavobacteria
-
Gómez-Consarnau L, et al. (2007) Light stimulates growth of proteorhodopsin-containing marine Flavobacteria. Nature 445(7124):210 - 213.
-
(2007)
Nature
, vol.445
, Issue.7124
, pp. 210-213
-
-
Gómez-Consarnau, L.1
-
12
-
-
80052964043
-
Light-induced transcriptional responses associated with proteorhodopsin-enhanced growth in a marine flavobacterium
-
Kimura H, Young CR, Martinez A, Delong EF (2011) Light-induced transcriptional responses associated with proteorhodopsin-enhanced growth in a marine flavobacterium. ISME J 5(10):1641-1651.
-
(2011)
ISME J
, vol.5
, Issue.10
, pp. 1641-1651
-
-
Kimura, H.1
Young, C.R.2
Martinez, A.3
Delong, E.F.4
-
13
-
-
66649089244
-
Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre
-
Poretsky RS, et al. (2009) Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre. Environ Microbiol 11(6): 1358- 1375.
-
(2009)
Environ Microbiol
, vol.11
, Issue.6
, pp. 1358-1375
-
-
Poretsky, R.S.1
-
14
-
-
71249149524
-
Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters
-
Lami R, Cottrell MT, Campbell BJ, Kirchman DL (2009) Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters. Environ Microbiol 11(12):3201-3209.
-
(2009)
Environ Microbiol
, vol.11
, Issue.12
, pp. 3201-3209
-
-
Lami, R.1
Cottrell, M.T.2
Campbell, B.J.3
Kirchman, D.L.4
-
15
-
-
77954273729
-
Enhancement of survival and electricity production in an engineered bacterium by light-driven proton pumping
-
Johnson ET, et al. (2010) Enhancement of survival and electricity production in an engineered bacterium by light-driven proton pumping. Appl Environ Microbiol 76(13): 4123-4129.
-
(2010)
Appl Environ Microbiol
, vol.76
, Issue.13
, pp. 4123-4129
-
-
Johnson, E.T.1
-
16
-
-
0038391981
-
Diversification and spectral tuning in marine proteorhodopsins
-
DOI 10.1093/emboj/cdg183
-
Man D, et al. (2003) Diversification and spectral tuning in marine proteorhodopsins. EMBO J 22(8):1725-1731. (Pubitemid 36460129)
-
(2003)
EMBO Journal
, vol.22
, Issue.8
, pp. 1725-1731
-
-
Man, D.1
Wang, W.2
Sabehi, G.3
Aravind, L.4
Post, A.F.5
Massana, R.6
Spudich, E.N.7
Spudich, J.L.8
Beja, O.9
-
17
-
-
34248151050
-
Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host
-
DOI 10.1073/pnas.0611470104
-
Martinez A, Bradley AS, Waldbauer JR, Summons RE, DeLong EF (2007) Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host. Proc Natl Acad Sci USA 104(13):5590-5595. (Pubitemid 47175725)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.13
, pp. 5590-5595
-
-
Martinez, A.1
Bradley, A.S.2
Waldbauer, J.R.3
Summons, R.E.4
DeLong, E.F.5
-
18
-
-
23944505538
-
New insights into metabolic properties of marine bacteria encoding proteorhodopsins
-
Sabehi G, et al. (2005) New insights into metabolic properties of marine bacteria encoding proteorhodopsins. PLoS Biol 3(8):e273.
-
(2005)
PLoS Biol
, vol.3
, Issue.8
-
-
Sabehi, G.1
-
19
-
-
33847770775
-
Light-powering Escherichia coli with proteorhodopsin
-
DOI 10.1073/pnas.0611035104
-
Walter JM, Greenfield D, Bustamante C, Liphardt J (2007) Light-powering Escherichia coli with proteorhodopsin. Proc Natl Acad Sci USA 104(7):2408-2412. (Pubitemid 46391410)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.7
, pp. 2408-2412
-
-
Walter, J.M.1
Greenfield, D.2
Bustamante, C.3
Liphardt, J.4
-
20
-
-
77951706049
-
Proteorhodopsin phototrophy promotes survival of marine bacteria during starvation
-
Gómez-Consarnau L, et al. (2010) Proteorhodopsin phototrophy promotes survival of marine bacteria during starvation. PLoS Biol 8(4):e1000358.
-
(2010)
PLoS Biol
, vol.8
, Issue.4
-
-
Gómez-Consarnau, L.1
-
21
-
-
84876480250
-
Regulation of proteorhodopsin gene expression by nutrient limitation in the marine bacterium Vibrio sp. AND4
-
Akram N, et al. (2013) Regulation of proteorhodopsin gene expression by nutrient limitation in the marine bacterium Vibrio sp. AND4. Environ Microbiol 15(5):1400-1415.
-
(2013)
Environ Microbiol
, vol.15
, Issue.5
, pp. 1400-1415
-
-
Akram, N.1
-
22
-
-
84862003743
-
Function and regulation of Vibrio campbellii proteorhodopsin: Acquired phototrophy in a classical organoheterotroph
-
Wang Z, et al. (2012) Function and regulation of Vibrio campbellii proteorhodopsin: Acquired phototrophy in a classical organoheterotroph. PLoS ONE 7(6):e38749.
-
(2012)
PLoS ONE
, vol.7
, Issue.6
-
-
Wang, Z.1
-
23
-
-
34247488726
-
The SAR92 clade: An abundant coastal clade of culturable marine bacteria possessing proteorhodopsin
-
DOI 10.1128/AEM.02559-06
-
Stingl U, Desiderio RA, Cho JC, Vergin KL, Giovannoni SJ (2007) The SAR92 clade: An abundant coastal clade of culturable marine bacteria possessing proteorhodopsin. Appl Environ Microbiol 73(7):2290-2296. (Pubitemid 46649521)
-
(2007)
Applied and Environmental Microbiology
, vol.73
, Issue.7
, pp. 2290-2296
-
-
Stingl, U.1
Desiderio, R.A.2
Cho, J.-C.3
Vergin, K.L.4
Giovannoni, S.J.5
-
24
-
-
79955856835
-
Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration
-
Steindler L, Schwalbach MS, Smith DP, Chan F, Giovannoni SJ (2011) Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration. PLoS ONE 6(5):e19725.
-
(2011)
PLoS ONE
, vol.6
, Issue.5
-
-
Steindler, L.1
Schwalbach, M.S.2
Smith, D.P.3
Chan, F.4
Giovannoni, S.J.5
-
25
-
-
47249148362
-
Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria)
-
DOI 10.1073/pnas.0712027105
-
González JM, et al. (2008) Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria). Proc Natl Acad Sci USA 105(25): 8724-8729. (Pubitemid 351987747)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.25
, pp. 8724-8729
-
-
Gonzalez, J.M.1
Fernandez-Gomez, B.2
Fernandez-Guerra, A.3
Gomez-Consarnau, L.4
Sanchez, O.5
Coll-Llado, M.6
Del, C.J.7
Escudero, L.8
Rodriguez-Martinez, R.9
Alonso-Saez, L.10
Latasa, M.11
Paulsen, I.12
Nedashkovskaya, O.13
Lekunberri, I.14
Pinhassi, J.15
Pedros-Alio, C.16
-
26
-
-
83155176272
-
Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. strain MED134
-
González JM, et al. (2011) Genomics of the proteorhodopsin- containing marine flavobacterium Dokdonia sp. strain MED134. Appl Environ Microbiol 77(24):8676-8686.
-
(2011)
Appl Environ Microbiol
, vol.77
, Issue.24
, pp. 8676-8686
-
-
González, J.M.1
-
27
-
-
0142225576
-
The contribution of monomers and other low-molecular weight compounds to the flux of dissolved organic matter in aquatic ecosystems
-
eds Findlay SEG, Sinsabaugh RL (Elsevier Science, New York)
-
Kirchman DL (2003) The contribution of monomers and other low-molecular weight compounds to the flux of dissolved organic matter in aquatic ecosystems. Aquatic Ecosystems: Interactivity of Dissolved Organic Matter, eds Findlay SEG, Sinsabaugh RL (Elsevier Science, New York), pp 217-241.
-
(2003)
Aquatic Ecosystems: Interactivity of Dissolved Organic Matter
, pp. 217-241
-
-
Kirchman, D.L.1
-
28
-
-
0001093004
-
Dissolved free amino acids in the Sargasso Sea: Uptake and respiration rates, turnover times, and concentrations
-
Suttle CA, Chan AM, Fuhrman JA (1991) Dissolved free amino acids in the Sargasso Sea: Uptake and respiration rates, turnover times, and concentrations. Mar Ecol Prog Ser 70:189-199.
-
(1991)
Mar Ecol Prog Ser
, vol.70
, pp. 189-199
-
-
Suttle, C.A.1
Chan, A.M.2
Fuhrman, J.A.3
-
29
-
-
0002528763
-
Close coupling between release and uptake of dissolved free amino acids in seawater studied by an isotope dilution approach
-
Fuhrman J (1987) Close coupling between release and uptake of dissolved free amino acids in seawater studied by an isotope dilution approach. Mar Ecol Prog Ser 37:42-52.
-
(1987)
Mar Ecol Prog Ser
, vol.37
, pp. 42-52
-
-
Fuhrman, J.1
-
30
-
-
84873455505
-
Pattern and synchrony of gene expression among sympatric marine microbial populations
-
Ottesen EA, et al. (2013) Pattern and synchrony of gene expression among sympatric marine microbial populations. Proc Natl Acad Sci USA 110(6):E488-E497.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, Issue.6
-
-
Ottesen, E.A.1
-
31
-
-
0017105966
-
Carbon assimilation from simple and complex media by prototrophic heterotrophic bacteria
-
Payne WJ, Williams ML (1976) Carbon assimilation from simple and complex media by prototrophic heterotrophic bacteria. Biotechnol Bioeng 18(11):1653-1655.
-
(1976)
Biotechnol Bioeng
, vol.18
, Issue.11
, pp. 1653-1655
-
-
Payne, W.J.1
Williams, M.L.2
-
33
-
-
84876836241
-
Ecology of marine Bacteroidetes: A comparative genomics approach
-
Fernández-Gómez B, et al. (2013) Ecology of marine Bacteroidetes: A comparative genomics approach. ISME J 7(5):1026-1037.
-
(2013)
ISME J
, vol.7
, Issue.5
, pp. 1026-1037
-
-
Fernández-Gómez, B.1
-
34
-
-
5644245207
-
Use of heterotrophic CO2 assimilation as a measure of metabolic activity in planktonic and sessile bacteria
-
Roslev P, Larsen MB, Jørgensen D, Hesselsoe M (2004) Use of heterotrophic CO2 assimilation as a measure of metabolic activity in planktonic and sessile bacteria. J Microbiol Methods 59(3):381 - 393.
-
(2004)
J Microbiol Methods
, vol.59
, Issue.3
, pp. 381-393
-
-
Roslev, P.1
Larsen, M.B.2
Jørgensen, D.3
Hesselsoe, M.4
-
35
-
-
78649449219
-
High bicarbonate assimilation in the dark by Arctic bacteria
-
Alonso-Sáez L, Galand PE, Casamayor EO, Pedrós-Alió C, Bertilsson S (2010) High bicarbonate assimilation in the dark by Arctic bacteria. ISME J 4(12):1581-1590.
-
(2010)
ISME J
, vol.4
, Issue.12
, pp. 1581-1590
-
-
Alonso-Sáez, L.1
Galand, P.E.2
Casamayor, E.O.3
Pedrós- Alió, C.4
Bertilsson, S.5
-
36
-
-
70349661794
-
Carbohydrate metabolism and carbon fixation in Roseobacter denitrificans OCh114
-
Tang KH, Feng X, Tang YJJ, Blankenship RE (2009) Carbohydrate metabolism and carbon fixation in Roseobacter denitrificans OCh114. PLoS ONE 4(10):e7233.
-
(2009)
PLoS ONE
, vol.4
, Issue.10
-
-
Tang, K.H.1
Feng, X.2
Tang, Y.J.J.3
Blankenship, R.E.4
-
37
-
-
33846592314
-
The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism
-
DOI 10.1128/JB.01390-06
-
Swingley WD, et al. (2007) The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism. J Bacteriol 189(3):683-690. (Pubitemid 46183843)
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.3
, pp. 683-690
-
-
Swingley, W.D.1
Sadekar, S.2
Mastrian, S.D.3
Matthies, H.J.4
Hao, J.5
Ramos, H.6
Acharya, C.R.7
Conrad, A.L.8
Taylor, H.L.9
Dejesa, L.C.10
Shah, M.K.11
O'Huallachain, M.E.12
Lince, M.T.13
Blankenship, R.E.14
Beatty, J.T.15
Touchman, J.W.16
-
39
-
-
0032426261
-
Bacterial growth efficiency in natural aquatic ecosystems
-
del Giorgio PA, Cole JJ (1998) Bacterial growth efficiency in natural aquatic ecosystems. Annu Rev Ecol Syst 29:503-541.
-
(1998)
Annu Rev Ecol Syst
, vol.29
, pp. 503-541
-
-
Del Giorgio, P.A.1
Cole, J.J.2
-
40
-
-
78651380983
-
Coherent patterns in bacterial growth, growth efficiency, and leucine metabolism along a northeastern Pacific inshore-offshore transect
-
del Giorgio PA, et al. (2011) Coherent patterns in bacterial growth, growth efficiency, and leucine metabolism along a northeastern Pacific inshore-offshore transect. Limnol Oceanogr 56(1):1-16.
-
(2011)
Limnol Oceanogr
, vol.56
, Issue.1
, pp. 1-16
-
-
Del Giorgio, P.A.1
-
41
-
-
0004155427
-
-
W. H. Freeman and Company, New York
-
Stryer L (1988) Biochemistry (W. H. Freeman and Company, New York).
-
(1988)
Biochemistry
-
-
Stryer, L.1
-
42
-
-
0018800384
-
Rate-limiting steps in metabolic pathways
-
Rognstad R (1979) Rate-limiting steps in metabolic pathways. J Biol Chem 254(6): 1875-1878.
-
(1979)
J Biol Chem
, vol.254
, Issue.6
, pp. 1875-1878
-
-
Rognstad, R.1
-
43
-
-
0026478079
-
Complexes and complexities of the citric acid cycle in Escherichia coli
-
Guest JR, Russell GC (1992) Complexes and complexities of the citric acid cycle in Escherichia coli. Curr Top Cell Regul 33:231-247.
-
(1992)
Curr Top Cell Regul
, vol.33
, pp. 231-247
-
-
Guest, J.R.1
Russell, G.C.2
-
44
-
-
25144516171
-
Physiological effects of replacing the PDH complex of E. coli by genetically engineered variants or by pyruvate oxidase
-
eds Gordon F, Patel MS (Marcel Dekker, New York)
-
Guest JR, et al. (2004) Physiological effects of replacing the PDH complex of E. coli by genetically engineered variants or by pyruvate oxidase. Thiamine: Catalytic Mechanisms and Role in Normal and Disease States, eds Gordon F, Patel MS (Marcel Dekker, New York).
-
(2004)
Thiamine: Catalytic Mechanisms and Role in Normal and Disease States
-
-
Guest, J.R.1
-
45
-
-
0029187997
-
2 consumption and isocitrate dehydrogenase in the marine bacterium Vibrio natriegens
-
2 consumption and isocitrate dehydrogenase in the marine bacterium Vibrio natriegens. Aquat Microb Ecol 9(3):211-217.
-
(1995)
Aquat Microb Ecol
, vol.9
, Issue.3
, pp. 211-217
-
-
Berdalet, E.1
-
46
-
-
84886725640
-
Light-stimulated growth of proteo-rhodopsin- bearing sea-ice psychrophile Psychroflexus torquis is salinity dependent
-
Feng S, Powell SM, Wilson R, Bowman JP (2013) Light-stimulated growth of proteo-rhodopsin- bearing sea-ice psychrophile Psychroflexus torquis is salinity dependent. ISME J 7(11):2206-2213.
-
(2013)
ISME J
, vol.7
, Issue.11
, pp. 2206-2213
-
-
Feng, S.1
Powell, S.M.2
Wilson, R.3
Bowman, J.P.4
-
47
-
-
0029812956
-
Concentrations and uptake of neutral monosaccharides along 140° W in the equatorial Pacific: Contribution of glucose to heterotrophic bacterial activity and the DOM flux
-
Rich JH, Ducklow HW, Kirchman DL (1996) Concentrations and uptake of neutral monosaccharides along 140° W in the equatorial Pacific: Contribution of glucose to heterotrophic bacterial activity and the DOM flux. Limnol Oceanogr 41(4):595-604. (Pubitemid 26324521)
-
(1996)
Limnology and Oceanography
, vol.41
, Issue.4
, pp. 595-604
-
-
Rich, J.H.1
Ducklow, H.W.2
Kirchman, D.L.3
-
48
-
-
84865724817
-
Structurin g of bacterioplankton communities by specific dissolved organic carbon compounds
-
Gómez-Consarnau L, Lindh MV, Gasol JM, Pinhassi J (2012) Structurin g of bacterioplankton communities by specific dissolved organic carbon compounds. Environ Microbiol 14(9): 2361-2378.
-
(2012)
Environ Microbiol
, vol.14
, Issue.9
, pp. 2361-2378
-
-
Gómez-Consarnau, L.1
Lindh, M.V.2
Gasol, J.M.3
Pinhassi, J.4
-
51
-
-
0037129827
-
Accurate normalization of real-time quantitative RTPCR data by geometric averaging of multiple internal control genes
-
RESEARCH0034
-
Vandesompele J, et al. (2002) Accurate normalization of real-time quantitative RTPCR data by geometric averaging of multiple internal control genes. Genome Biol 18(3):RESEARCH0034.
-
(2002)
Genome Biol
, vol.18
, Issue.3
-
-
Vandesompele, J.1
-
52
-
-
1842483281
-
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations
-
DOI 10.1023/B:BILE.0000019559.84305.47
-
Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP (2004) Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: Best- Keeper - Excel-based tool using pair-wise correlations. Biotechnol Lett 26(6):509-515. (Pubitemid 38448421)
-
(2004)
Biotechnology Letters
, vol.26
, Issue.6
, pp. 509-515
-
-
Pfaffl, M.W.1
Tichopad, A.2
Prgomet, C.3
Neuvians, T.P.4
-
53
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl MW (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 29(9):e45.
-
(2001)
Nucleic Acids Res
, vol.29
, Issue.9
-
-
Pfaffl, M.W.1
-
54
-
-
44949157290
-
A probabilistic model of local sequence alignment that simplifies statistical significance estimation
-
Eddy SR (2008) A probabilistic model of local sequence alignment that simplifies statistical significance estimation. PLOS Comput Biol 4(5):e1000069.
-
(2008)
PLOS Comput Biol
, vol.4
, Issue.5
-
-
Eddy, S.R.1
-
55
-
-
84873739311
-
The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools
-
Quast C, et al. (2013) The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res 41(Database issue):D590-D596.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.DATABASE ISSUE
-
-
Quast, C.1
-
56
-
-
78651326786
-
FragGeneScan: Predicting genes in short and error-prone reads
-
Rho M, Tang H, Ye Y (2010) FragGeneScan: Predicting genes in short and error-prone reads. Nucleic Acids Res 38(20):e191.
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.20
-
-
Rho, M.1
Tang, H.2
Ye, Y.3
|