-
1
-
-
57649114800
-
Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic
-
Agogué H, Brink M, Dinasquet J, Herndl GJ. (2008). Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic. Nature 456:788-791.
-
(2008)
Nature
, vol.456
, pp. 788-791
-
-
Agogué, H.1
Brink, M.2
Dinasquet, J.3
Herndl, G.J.4
-
2
-
-
0038681416
-
Diversity of ribulose-1, 5-bisphosphate carboxylase/oxygenase large-subunit genes from groundwater and aquifer microorganisms
-
Alfreider A, Vogt C, Hoffmann D, Babel W. (2003). Diversity of ribulose-1, 5-bisphosphate carboxylase/oxygenase large-subunit genes from groundwater and aquifer microorganisms. Microb Ecol 45:317-328.
-
(2003)
Microb. Ecol.
, vol.45
, pp. 317-328
-
-
Alfreider, A.1
Vogt, C.2
Hoffmann, D.3
Babel, W.4
-
3
-
-
33847173099
-
Large-scale variability in surface bacterial carbon demand and growth efficiency in the subtropical northeast Atlantic Ocean
-
Alonso-Sáez L, Gasol JM, Arístegui J, Vilas JC, Vaqué D, Duarte CM et al. (2007). Large-scale variability in surface bacterial carbon demand and growth efficiency in the subtropical northeast Atlantic Ocean. Limnol Oceanogr 52:533-546.
-
(2007)
Limnol Oceanogr
, vol.52
, pp. 533-546
-
-
Alonso-Sáez, L.1
Gasol, J.M.2
Arístegui, J.3
Vilas, J.C.4
Vaqué, D.5
Duarte, C.M.6
-
4
-
-
48849116041
-
Winter-to-summer changes in the composition and single-cell activity of near-surface Arctic prokaryotes
-
Alonso-Sáez L, Sánchez O, Gasol JM, Balagué V, Pedrós-Alió CM. (2008). Winter-to-summer changes in the composition and single-cell activity of near-surface Arctic prokaryotes. Environ Microbiol 10:2444-2454.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 2444-2454
-
-
Alonso-Sáez, L.1
Sánchez, O.2
Gasol, J.M.3
Balagué, V.4
Pedrós-Alió, C.M.5
-
5
-
-
51649106372
-
Fingerprinting the genetic diversity of the biotin carboxylase gene (accC) in aquatic ecosystems as a potential marker for studies of carbon dioxide assimilation in the dark
-
Auguet JC, Borrego CM, Bañeras L, Casamayor EO. (2008). Fingerprinting the genetic diversity of the biotin carboxylase gene (accC) in aquatic ecosystems as a potential marker for studies of carbon dioxide assimilation in the dark. Environ Microbiol 10:2527-2536.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 2527-2536
-
-
Auguet, J.C.1
Borrego, C.M.2
Bañeras, L.3
Casamayor, E.O.4
-
6
-
-
0036151745
-
Phylogenetic composition of bacterioplankton assemblages from the Arctic ocean
-
Bano N, Hollibaugh JT. (2002). Phylogenetic composition of bacterioplankton assemblages from the Arctic ocean. Appl Environ Microbiol 68:505-518.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 505-518
-
-
Bano, N.1
Hollibaugh, J.T.2
-
8
-
-
37249052742
-
A 3-Hydroxyproprionate/4-Hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea
-
Berg IA, Kockelkorn D, Buckel W, Fuchs G. (2007). A 3-Hydroxyproprionate/ 4-Hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea. Science 318:1782-1786.
-
(2007)
Science
, vol.318
, pp. 1782-1786
-
-
Berg, I.A.1
Kockelkorn, D.2
Buckel, W.3
Fuchs, G.4
-
10
-
-
47349090798
-
Carbon dioxide fixation in the dark by photosynthetic bacteria in sulfide-rich stratified lakes with oxicanoxic interfaces
-
Casamayor EO, García-Cantizano J, Pedrós-Alió C. (2008). Carbon dioxide fixation in the dark by photosynthetic bacteria in sulfide-rich stratified lakes with oxicanoxic interfaces. Limnol Oceanogr 53:1193-1203.
-
(2008)
Limnol Oceanogr
, vol.53
, pp. 1193-1203
-
-
Casamayor, E.O.1
García-Cantizano, J.2
Pedrós-Alió, C.3
-
11
-
-
24644503098
-
Blast2go: A universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa A, Gotz S, García-Gómez JM, Terol J, Talvón M, Robles M. (2005). Blast2go: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21:3674-3676.
-
(2005)
Bioinformatics
, vol.21
, pp. 3674-3676
-
-
Conesa, A.1
Gotz, S.2
García-Gómez, J.M.3
Terol, J.4
Talvón, M.5
Robles, M.6
-
12
-
-
0037408431
-
Complete genome sequenceofthe ammoniaoxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea
-
Chain P, Lamerdin J, Larimer F, Regala W, Lao V, Land M et al. (2003). Complete genome sequenceofthe ammoniaoxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea. J Bacteriol 185:2759-2773.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 2759-2773
-
-
Chain, P.1
Lamerdin, J.2
Larimer, F.3
Regala, W.4
Lao, V.5
Land, M.6
-
13
-
-
0029789243
-
Flow cytometric determination of bacterial abundance in lake plankton with the green nucleic acid stain SYTO13
-
Del Giorgio PA, Bird DF, Prairie YT, Planas D. (1996). Flow cytometric determination of bacterial abundance in lake plankton with the green nucleic acid stain SYTO13. Limnol Oceanogr 41:783-789.
-
(1996)
Limnol Oceanogr
, vol.41
, pp. 783-789
-
-
Del Giorgio, P.A.1
Bird, D.F.2
Prairie, Y.T.3
Planas, D.4
-
14
-
-
0027796393
-
Phototrophic and heterotrophic pico and nanoplankton in anoxic depths of the central Baltic Sea
-
Detmer AE, Giesenhagen HC, Trenkel VM, Auf dem Venne H, Jochem FJ. (1993). Phototrophic and heterotrophic pico and nanoplankton in anoxic depths of the central Baltic Sea. Mar. Ecol Prog Ser 99:197-203.
-
(1993)
Mar. Ecol. Prog. Ser.
, vol.99
, pp. 197-203
-
-
Detmer, A.E.1
Giesenhagen, H.C.2
Trenkel, V.M.3
Auf Dem Venne, H.4
Jochem, F.J.5
-
15
-
-
0021684161
-
Current views on the regulation of autotrophic carbon dioxide fixation via the Calvin cycle in bacteria
-
Dijkhuizen L, Harder W. (1984). Current views on the regulation of autotrophic carbon dioxide fixation via the Calvin cycle in bacteria. Antonie van Leeuwenhoek 50:473-487.
-
(1984)
Antonie van Leeuwenhoek
, vol.50
, pp. 473-487
-
-
Dijkhuizen, L.1
Harder, W.2
-
16
-
-
0021709047
-
Levels of carbon dioxide assimilation in bacteria with different pathways of C1 metabolism
-
Doronia NV, Trotsenko YA. (1985). Levels of carbon dioxide assimilation in bacteria with different pathways of C1 metabolism. Microbiologiya 53:885-889.
-
(1985)
Microbiologiya
, vol.53
, pp. 885-889
-
-
Doronia, N.V.1
Trotsenko, Y.A.2
-
18
-
-
10044278979
-
Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes
-
Eiler A, Bertilsson S. (2004). Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes. Environ Microbiol 6:1228-1243.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 1228-1243
-
-
Eiler, A.1
Bertilsson, S.2
-
21
-
-
51849089259
-
Seasonal dynamics of bacterial biomass and production in a coastal artic ecosystem: Franklin Bay, western Canadian Artic
-
doi:10.1029/2007JC004281
-
Garneau ME, Roy S, Lovejoy C, Vincent WF. (2008). Seasonal dynamics of bacterial biomass and production in a coastal artic ecosystem: Franklin Bay, western Canadian Artic. J Geophys Res 113: C07S91, doi:10.1029/2007JC004281.
-
(2008)
J. Geophys Res.
, vol.113
-
-
Garneau, M.E.1
Roy, S.2
Lovejoy, C.3
Vincent, W.F.4
-
22
-
-
47249148362
-
Genome analysis of the proteorhopdopsincontaining marine bacterium Polaribacter sp MED152 (Flavobacteria)
-
González JM, Fernández-Gómez B, Fernàndez- Guerra A, Gómez-Consarnau L, Sánchez O, Coll-Lladó M et al. (2008). Genome analysis of the proteorhopdopsincontaining marine bacterium Polaribacter sp MED152 (Flavobacteria). PNAS 105:8724-8729.
-
(2008)
PNAS
, vol.105
, pp. 8724-8729
-
-
González, J.M.1
Fernández-Gómez, B.2
Fernàndez-Guerra, A.3
Gómez-Consarnau, L.4
Sánchez, O.5
Coll-Lladó, M.6
-
23
-
-
18444408108
-
Contribution of Archaea to total prokaryotic production in the Deep Atlantic Ocean
-
Herndl GJ, Reinthaler T, Teira E, van Aken H, Veth C, Pernthaler A et al. (2005). Contribution of Archaea to total prokaryotic production in the Deep Atlantic Ocean. Appl Environ Microbiol 71:2303-2309.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 2303-2309
-
-
Herndl, G.J.1
Reinthaler, T.2
Teira, E.3
Van Aken, H.4
Veth, C.5
Pernthaler, A.6
-
25
-
-
5044240973
-
Bellerophon: A program to detect chimeric sequences in multiple sequence alignments
-
Huber T, Faulkner G, Hugenholtz P. (2004). Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20:2317-2319.
-
(2004)
Bioinformatics
, vol.20
, pp. 2317-2319
-
-
Huber, T.1
Faulkner, G.2
Hugenholtz, P.3
-
26
-
-
0027800614
-
Coulometric total carbon dioxide analysis for marine studies: Maximizing the performance of an automated gas extraction system and coulometric detector
-
Johnson KM, Wills KD, Butler DB, Johnson WK, Wong CS. (1993). Coulometric total carbon dioxide analysis for marine studies: maximizing the performance of an automated gas extraction system and coulometric detector. Mar. Chem 44:167-187.
-
(1993)
Mar. Chem.
, vol.44
, pp. 167-187
-
-
Johnson, K.M.1
Wills, K.D.2
Butler, D.B.3
Johnson, W.K.4
Wong, C.S.5
-
27
-
-
34250902876
-
Standing stocks and activity of archaea and bacteria in the Western Arctic Ocean
-
Kirchman DL, Elifantz H, Dittel AI, Malmstrom RR, Cottrell MT. (2007). Standing stocks and activity of archaea and bacteria in the Western Arctic Ocean. Limnol Oceanogr 52:495-507.
-
(2007)
Limnol Oceanogr
, vol.52
, pp. 495-507
-
-
Kirchman, D.L.1
Elifantz, H.2
Dittel, A.I.3
Malmstrom, R.R.4
Cottrell, M.T.5
-
28
-
-
0021910579
-
Leucine incorporation and its potential as a measure of protein synthesis by bacteria in natural aquatic ecosystems
-
Kirchman DL, K'nees E, Hodson R. (1985). Leucine incorporation and its potential as a measure of protein synthesis by bacteria in natural aquatic ecosystems. Appl Environ Microbiol 49:599-607.
-
(1985)
Appl. Environ. Microbiol.
, vol.49
, pp. 599-607
-
-
Kirchman, D.L.1
K'nees, E.2
Hodson, R.3
-
29
-
-
0001112782
-
Incorporation versus biosynthesis of leucine: Implications for measuring rates of protein synthesis and biomass production by bacteria in marine systems
-
Kirchman DL, Newell SY, Hodson RE. (1986). Incorporation versus biosynthesis of leucine: implications for measuring rates of protein synthesis and biomass production by bacteria in marine systems. Mar. Ecol Prog Ser 32:47-59.
-
(1986)
Mar. Ecol. Prog. Ser.
, vol.32
, pp. 47-59
-
-
Kirchman, D.L.1
Newell, S.Y.2
Hodson, R.E.3
-
30
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
Könneke M, Bernhard AE, De La Torre JR, Walker CB, Waterbury JB, Stahl DA. (2005). Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437:543-546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Könneke, M.1
Bernhard, A.E.2
De La Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
31
-
-
0025948601
-
14C uptake in dimly-lit oligotrophic waters: Relation to bacterial activity
-
14C uptake in dimly-lit oligotrophic waters: relation to bacterial activity. J Plankton Res 13:29-44.
-
(1991)
J. Plankton Res.
, vol.13
, pp. 29-44
-
-
Li, W.K.W.1
Dickie, P.M.2
-
32
-
-
0027879974
-
14C: Variations related to biomass and productivity of phytoplankton and bacteria
-
14C: Variations related to biomass and productivity of phytoplankton and bacteria. Limnol Oceanogr 38:483-494.
-
(1993)
Limnol Oceanogr
, vol.38
, pp. 483-494
-
-
Li, W.K.W.1
Irwin, B.D.2
Dickie, P.M.3
-
33
-
-
34548297783
-
Diversity, abundance, and biomass production of bacterial groups in the Western Arctic Ocean
-
Malmstrom RR, Straza T R A, Cottrell MT, Kirchman DL. (2007). Diversity, abundance, and biomass production of bacterial groups in the Western Arctic Ocean. Aquat Microb Ecol 47:45-55.
-
(2007)
Aquat. Microb. Ecol.
, vol.47
, pp. 45-55
-
-
Malmstrom, R.R.1
Straza, T.R.A.2
Cottrell, M.T.3
Kirchman, D.L.4
-
34
-
-
70349209126
-
Major role of microbes in carbon fluxes during austral winter in the Southern Drake Passage
-
doi:10.1371/journal. pone.0006941
-
Manganelli M, Malfatti F, Samo TJ, Mitchell BG, Wang H, Azam F. (2009). Major role of microbes in carbon fluxes during austral winter in the Southern Drake Passage. PLoS ONE 4: e6941. doi:10.1371/journal. pone.0006941.
-
(2009)
PLoS ONE
, vol.4
-
-
Manganelli, M.1
Malfatti, F.2
Samo, T.J.3
Mitchell, B.G.4
Wang, H.5
Azam, F.6
-
35
-
-
0031697985
-
14C in oligotrophic oceanic waters
-
14C in oligotrophic oceanic waters. J Plankton Res 20:1813-1836.
-
(1998)
J. Plankton Res.
, vol.20
, pp. 1813-1836
-
-
Markager, S.1
-
37
-
-
0142183477
-
Why is carbonic anhydrase essential to Escherichia coli?
-
Merlin C, Masters M, McAteer S, Coulson A. (2003). Why is carbonic anhydrase essential to Escherichia coli? J Bacteriol 185:6415-6424.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 6415-6424
-
-
Merlin, C.1
Masters, M.2
McAteer, S.3
Coulson, A.4
-
38
-
-
23344439437
-
The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses
-
Methé BA, Nelson KE, Deming JW, Momen B, Melamud E, Zhang X et al. (2005). The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses. PNAS 102:10913-10918.
-
(2005)
PNAS
, vol.102
, pp. 10913-10918
-
-
Methé, B.A.1
Nelson, K.E.2
Deming, J.W.3
Momen, B.4
Melamud, E.5
Zhang, X.6
-
39
-
-
0005960375
-
2 uptake - biochemical background and its relevance to in situ bacterial production
-
2 uptake - biochemical background and its relevance to in situ bacterial production. Arch Hydrobiol Beih Ergebn Limnol 12:38-47.
-
(1979)
Arch. Hydrobiol Beih Ergebn Limnol
, vol.12
, pp. 38-47
-
-
Overbeck, J.1
-
40
-
-
0141632142
-
Some precautionary comments on the Romanenko technique for estimating heterotrophic bacterial production
-
Overbeck J, Daley RJ. (1973). Some precautionary comments on the Romanenko technique for estimating heterotrophic bacterial production. Bull Ecol Res Comm 17:342-344.
-
(1973)
Bull. Ecol. Res. Comm.
, vol.17
, pp. 342-344
-
-
Overbeck, J.1
Daley, R.J.2
-
41
-
-
21244484895
-
Sensitive multi-color fluorescence in situ hybridization for the identification of environmental microorganisms
-
Netherlands, Kluwer Academic Publishers
-
Pernthaler A, Pernthaler J, Amann R. (2004). Sensitive multi-color fluorescence in situ hybridization for the identification of environmental microorganisms. Molec Microb Ecol Manual Second Edition 311:711-726 (Netherlands, Kluwer Academic Publishers).
-
(2004)
Molec Microb. Ecol. Manual Second Edition
, vol.311
, pp. 711-726
-
-
Pernthaler, A.1
Pernthaler, J.2
Amann, R.3
-
43
-
-
0012642486
-
2 by bacterial flora of water
-
2 by bacterial flora of water. Microbiologiya 33:610-614.
-
(1964)
Microbiologiya
, vol.33
, pp. 610-614
-
-
Romanenko, V.I.1
-
46
-
-
0013997715
-
On the carbon dioxide uptake during the cell synthesis by microorganisms
-
Sorokin JI. (1966). On the carbon dioxide uptake during the cell synthesis by microorganisms. Z allg Mikrobiol 6:69-73.
-
(1966)
Z. Allg. Mikrobiol
, vol.6
, pp. 69-73
-
-
Sorokin, J.I.1
-
47
-
-
84959762277
-
The bacterial population and the processes of hydrogen suphile oxidation in the Black Sea
-
Sorokin YI. (1972). The bacterial population and the processes of hydrogen suphile oxidation in the Black Sea. J Cons Int Explor Mer 34:423-454.
-
(1972)
J. Cons Int. Explor Mer
, vol.34
, pp. 423-454
-
-
Sorokin, Y.I.1
-
48
-
-
0005098961
-
Heterotrophic assimilation of carbon dioxide
-
Werkman CH, Wood HG. (1942). Heterotrophic assimilation of carbon dioxide. Advances in Enzymol 2:135-182.
-
(1942)
Advances in Enzymol.
, vol.2
, pp. 135-182
-
-
Werkman, C.H.1
Wood, H.G.2
-
49
-
-
0343570513
-
16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroidetes
-
Weller R, Glöckner FO, Amann R. (2000). 16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroidetes. Syst Appl Microbiol 23:107-114.
-
(2000)
Syst. Appl. Microbiol.
, vol.23
, pp. 107-114
-
-
Weller, R.1
Glöckner, F.O.2
Amann, R.3
-
50
-
-
0038209139
-
Oleispira Antarctica gen Nov, sp nov, a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water
-
Yakimov MM, Giuliano L, Gentile G, Crisafi E, Chernikova TN, Wolf-Rainer A et al. (2003). Oleispira Antarctica gen Nov, sp nov, a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water. Int J Syst Evol Microbiol 53:779-785.
-
(2003)
Int. J. Syst. Evol. Microbiol.
, vol.53
, pp. 779-785
-
-
Yakimov, M.M.1
Giuliano, L.2
Gentile, G.3
Crisafi, E.4
Chernikova, T.N.5
Wolf-Rainer, A.6
-
51
-
-
0030814871
-
Carboxylation as an initial reaction in the anaerobic metabolism of naphthalene and phenanthrene by sulfidogenic consortia
-
Zhang X, Young LY. (1997). Carboxylation as an initial reaction in the anaerobic metabolism of naphthalene and phenanthrene by sulfidogenic consortia. Appl Environ Microbiol 12:4759-4762.
-
(1997)
Appl. Environ. Microbiol.
, vol.12
, pp. 4759-4762
-
-
Zhang, X.1
Young, L.Y.2
|