-
1
-
-
8744282719
-
Changes in bacterioplankton composition under different phytoplankton regimens
-
Pinhassi J, et al. (2004) Changes in bacterioplankton composition under different phytoplankton regimens. Appl Environ Microbiol 70:6753-6766.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 6753-6766
-
-
Pinhassi, J.1
-
2
-
-
0033951021
-
Dynamics of bacterial community composition and activity during a mesocosm diatom bloom
-
Riemann L, Steward GF, Azam F (2000) Dynamics of bacterial community composition and activity during a mesocosm diatom bloom. Appl Environ Microbiol 66:578-587.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 578-587
-
-
Riemann, L.1
Steward, G.F.2
Azam, F.3
-
3
-
-
0027801562
-
Phylogenetic diversity of aggregate-attached versus free-living marine bacterial assemblages
-
DeLong E, Franks DG, Alldredge AL (1993) Phylogenetic diversity of aggregate-attached versus free-living marine bacterial assemblages. Limnol Oceanog 38:924-934.
-
(1993)
Limnol Oceanog
, vol.38
, pp. 924-934
-
-
DeLong, E.1
Franks, D.G.2
Alldredge, A.L.3
-
4
-
-
0034068899
-
Natural assemblages of marine Proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter
-
Cottrell MT, Kirchman DL (2000) Natural assemblages of marine Proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter. Appl Environ Microbiol 66:1692-1697.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 1692-1697
-
-
Cottrell, M.T.1
Kirchman, D.L.2
-
5
-
-
33750907710
-
Whole genome analysis of the marine Bacteroidetes 'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter
-
Bauer MM, et al. (2006) Whole genome analysis of the marine Bacteroidetes 'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter. Environ Microbiol 8:2201-2213.
-
(2006)
Environ Microbiol
, vol.8
, pp. 2201-2213
-
-
Bauer, M.M.1
-
6
-
-
19944408938
-
Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment
-
Moran MA, et al. (2004) Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment. Nature 432:910-913.
-
(2004)
Nature
, vol.432
, pp. 910-913
-
-
Moran, M.A.1
-
7
-
-
27744438187
-
Proteorhodopsin in the ubiquitous marine bacterium SAR11
-
Giovannoni SJ, et al. (2005) Proteorhodopsin in the ubiquitous marine bacterium SAR11. Nature 438:82-85.
-
(2005)
Nature
, vol.438
, pp. 82-85
-
-
Giovannoni, S.J.1
-
8
-
-
0034469143
-
Community composition of marine bacterioplankton determined by 16S rRNA gene clone libraries and fluorescence in situ hybridization
-
Cottrell MT, Kirchman DL (2000) Community composition of marine bacterioplankton determined by 16S rRNA gene clone libraries and fluorescence in situ hybridization. Appl Environ Microbiol 66:5116-5122.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 5116-5122
-
-
Cottrell, M.T.1
Kirchman, D.L.2
-
9
-
-
17644439150
-
Bacterioplankton compositions of lakes and oceans: A first comparison based on fluorescence in situ hybridization
-
Glöckner F-O, Fuchs BM, Amann Rl (1999) Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization. Appl Environ Microbiol 65:3721-3726.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 3721-3726
-
-
Glöckner, F.-O.1
Fuchs, B.M.2
Amann, R.3
-
10
-
-
11144275310
-
Ecological and biogeographic relationships of class Flavobacteria in the Southern Ocean
-
Abell GCJ, Bowman JP (2005) Ecological and biogeographic relationships of class Flavobacteria in the Southern Ocean. FEMS Microbiol Ecol 51:265-277.
-
(2005)
FEMS Microbiol Ecol
, vol.51
, pp. 265-277
-
-
Abell, G.C.J.1
Bowman, J.P.2
-
11
-
-
34248189721
-
High local and global diversity of Flavobacteria in marine plankton
-
Alonso C, Warnecke F, Amann Rl, Pernthaler J (2007) High local and global diversity of Flavobacteria in marine plankton. Environ Microbiol 9:1253-1266.
-
(2007)
Environ Microbiol
, vol.9
, pp. 1253-1266
-
-
Alonso, C.1
Warnecke, F.2
Amann, R.3
Pernthaler, J.4
-
12
-
-
28944443526
-
Biogeographic analysis of ribosomal RNA clusters from marine bacterioplankton
-
Pommier T, Pinhassi J, Hagstr̈m Å (2005) Biogeographic analysis of ribosomal RNA clusters from marine bacterioplankton. Aquat Microb Ecol 41:79-89.
-
(2005)
Aquat Microb Ecol
, vol.41
, pp. 79-89
-
-
Pommier, T.1
Pinhassi, J.2
Hagstr̈m, A.3
-
13
-
-
0034665853
-
Bacterial rhodopsin: Evidence for a new type of phototrophy in the sea
-
Béjà O.et al. (2000) Bacterial rhodopsin: evidence for a new type of phototrophy in the sea. Science 289:1902-1906.
-
(2000)
Science
, vol.289
, pp. 1902-1906
-
-
Béjà, O.1
-
14
-
-
34248151050
-
Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host
-
Martinez A, Bradley AS, Waldbauer JR, Summons RE, DeLong EF (2007) Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host. Proc Natl Acad Sci USA 104:5590-5595.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 5590-5595
-
-
Martinez, A.1
Bradley, A.S.2
Waldbauer, J.R.3
Summons, R.E.4
DeLong, E.F.5
-
16
-
-
34247488726
-
The SAR92 clade: An abundant coastal clade of culturable marine bacteria possessing proteorhodopsin
-
Stingl U, Desiderio RA, Cho JC, Vergin KL, Giovannoni SJ (2007) The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin. Appl Environ Microbiol 73:2290-2296.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 2290-2296
-
-
Stingl, U.1
Desiderio, R.A.2
Cho, J.C.3
Vergin, K.L.4
Giovannoni, S.J.5
-
17
-
-
33846238031
-
Light stimulates growth of proteorhodopsin-containing marine Flavobacteria
-
Gómez-Consarnau L, et al. (2007) Light stimulates growth of proteorhodopsin-containing marine Flavobacteria. Nature 445:210-213.
-
(2007)
Nature
, vol.445
, pp. 210-213
-
-
Gómez-Consarnau, L.1
-
18
-
-
0027219326
-
+-translocating NADH-quinone reductase of marine and halophilic bacteria
-
+-translocating NADH-quinone reductase of marine and halophilic bacteria. J Bionenerg Biomembr 25:385-391.
-
(1993)
J Bionenerg Biomembr
, vol.25
, pp. 385-391
-
-
Unemoto, T.1
Hayashi, M.2
-
19
-
-
11144237308
-
Identification of a SulP-type bicarbonate transporter in marine cyanobacteria
-
Price GD, Woodger FJ, Badger MR, Howitt SM, Tucker L (2004) Identification of a SulP-type bicarbonate transporter in marine cyanobacteria. Proc Natl Acad Sci USA 101:18228-18233.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 18228-18233
-
-
Price, G.D.1
Woodger, F.J.2
Badger, M.R.3
Howitt, S.M.4
Tucker, L.5
-
20
-
-
0037166350
-
Genes essential to sodium-dependent bicarbonate transport in cyanobacteria
-
Shibata M, et al. (2002) Genes essential to sodium-dependent bicarbonate transport in cyanobacteria. J Biol Chem 277:18658-18664.
-
(2002)
J Biol Chem
, vol.277
, pp. 18658-18664
-
-
Shibata, M.1
-
21
-
-
36248934750
-
Photosensing in chemotrophic, non-phototrophic bacteria: Let there be light sensing too
-
Van der Horst MA, Key J, Hellingwerf KJ (2007) Photosensing in chemotrophic, non-phototrophic bacteria: let there be light sensing too. Trends Microbiol 15:554-562.
-
(2007)
Trends Microbiol
, vol.15
, pp. 554-562
-
-
Van der Horst, M.A.1
Key, J.2
Hellingwerf, K.J.3
-
22
-
-
0032990441
-
PAS domains: Internal sensors of oxygen, redox potential, and light
-
Taylor BL, Zhulin IB (1999) PAS domains: internal sensors of oxygen, redox potential, and light. Microbiol Mol Biol Rev 63:479-506.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 479-506
-
-
Taylor, B.L.1
Zhulin, I.B.2
-
23
-
-
0035853748
-
The phytochromes, a family of red/far-red absorbing photoreceptors
-
Fankhauser C (2001) The phytochromes, a family of red/far-red absorbing photoreceptors. J Biol Chem 276:11453-11456.
-
(2001)
J Biol Chem
, vol.276
, pp. 11453-11456
-
-
Fankhauser, C.1
-
24
-
-
33745155455
-
Cyanobacterial two-component proteins: Structure, diversity, distribution, and evolution
-
Ashby MK, Houmard J (2006) Cyanobacterial two-component proteins: structure, diversity, distribution, and evolution. Microbiol Mol Biol Rev 70:472-509.
-
(2006)
Microbiol Mol Biol Rev
, vol.70
, pp. 472-509
-
-
Ashby, M.K.1
Houmard, J.2
-
25
-
-
0034660609
-
Bacterial cryptochrome and photolyase: Characterization of two photolyase-like genes of Synechocystis sp. PCC6803
-
Hitomi K, et al. (2000) Bacterial cryptochrome and photolyase: characterization of two photolyase-like genes of Synechocystis sp. PCC6803. Nucleic Acids Res 28:2353-2362.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 2353-2362
-
-
Hitomi, K.1
-
26
-
-
0030831112
-
Molecular evolution of the photolyase-blue-light photoreceptor family
-
Kanai S, Kikuno R, Toh H, Ryo H, Todo T (1997) Molecular evolution of the photolyase-blue-light photoreceptor family. J Mol Evol 45:535-548.
-
(1997)
J Mol Evol
, vol.45
, pp. 535-548
-
-
Kanai, S.1
Kikuno, R.2
Toh, H.3
Ryo, H.4
Todo, T.5
-
27
-
-
0036804709
-
BLUF: A novel FAD-binding domain involved in sensory transduction in microorganisms
-
Gomelsky M, Klug G (2002) BLUF: A novel FAD-binding domain involved in sensory transduction in microorganisms. Trends Biochem Sci 27:497-500.
-
(2002)
Trends Biochem Sci
, vol.27
, pp. 497-500
-
-
Gomelsky, M.1
Klug, G.2
-
28
-
-
0036207009
-
The ecology of Cytophaga-Flavobacteria in aquatic environments
-
Kirchman DL (2002) The ecology of Cytophaga-Flavobacteria in aquatic environments. FEMS Microbiol Ecol 39:91-100.
-
(2002)
FEMS Microbiol Ecol
, vol.39
, pp. 91-100
-
-
Kirchman, D.L.1
-
29
-
-
0024319453
-
Biochemical evidence that starch breakdown by Bacteroides thetaiotaomicron involves outer membrane starch binding sites and periplasmic starch-degrading enzymes
-
Anderson KL, Salyers AA (1989) Biochemical evidence that starch breakdown by Bacteroides thetaiotaomicron involves outer membrane starch binding sites and periplasmic starch-degrading enzymes. J Bacteriol 171:3192-3198.
-
(1989)
J Bacteriol
, vol.171
, pp. 3192-3198
-
-
Anderson, K.L.1
Salyers, A.A.2
-
30
-
-
0024336683
-
Genetic evidence that outer membrane binding of starch is required for starch utilization by Bacteroides thetaiotaomicron
-
Anderson KL, Salyers AA (1989) Genetic evidence that outer membrane binding of starch is required for starch utilization by Bacteroides thetaiotaomicron. J Bacteriol 171:3199-3204.
-
(1989)
J Bacteriol
, vol.171
, pp. 3199-3204
-
-
Anderson, K.L.1
Salyers, A.A.2
-
31
-
-
0031015878
-
Characterization of four outer membrane proteins that play a role in utilization of starch by Bacteroides thetaiotaomicron
-
Reeves AR, Wang G-R, Salyers AA (1997) Characterization of four outer membrane proteins that play a role in utilization of starch by Bacteroides thetaiotaomicron. J Bacteriol 179:643-649.
-
(1997)
J Bacteriol
, vol.179
, pp. 643-649
-
-
Reeves, A.R.1
Wang, G.-R.2
Salyers, A.A.3
-
32
-
-
45649085030
-
Plant carbohydrate scavenging through TonB-dependent receptors: A feature shared by phytopathogenic and aquatic bacteria
-
Blanvillain S, et al. (2007) Plant carbohydrate scavenging through TonB-dependent receptors: a feature shared by phytopathogenic and aquatic bacteria. PLoS ONE 2:e224.
-
(2007)
PLoS ONE
, vol.2
-
-
Blanvillain, S.1
-
33
-
-
0035515271
-
Antagonistic interactions among marine pelagic bacteria
-
Long RA, Azam F (2001) Antagonistic interactions among marine pelagic bacteria. Appl Environ Microbiol 67:4975-4983.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4975-4983
-
-
Long, R.A.1
Azam, F.2
-
34
-
-
1542301441
-
Antagonistic activity of bacteria isolated from organic aggregates of the German Wadden Sea
-
Grossart HP, Schlingloff A, Bernhard M, Simon M, Brinkhoff T (2004) Antagonistic activity of bacteria isolated from organic aggregates of the German Wadden Sea. FEMS Microbiol Ecol 47:387-396,
-
(2004)
FEMS Microbiol Ecol
, vol.47
, pp. 387-396
-
-
Grossart, H.P.1
Schlingloff, A.2
Bernhard, M.3
Simon, M.4
Brinkhoff, T.5
-
35
-
-
55449113709
-
Comparative analyses of fundamental differences in membrane transport capabilities in Prokaryotes and Eukaryotes
-
Ren Q, Paulsen IT (2005) Comparative analyses of fundamental differences in membrane transport capabilities in Prokaryotes and Eukaryotes. PLoS Comput Biol 1:e27.
-
(2005)
PLoS Comput Biol
, vol.1
-
-
Ren, Q.1
Paulsen, I.T.2
-
36
-
-
33746605947
-
A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes
-
Goldberg MD, et al. (2006) A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes. Proc Natl Acad Sci USA 103:11240-11245.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 11240-11245
-
-
Goldberg, M.D.1
-
37
-
-
0037561991
-
GenDB - An open source genome annotation system for prokaryote genomes
-
Meyer F, et al. (2003) GenDB - An open source genome annotation system for prokaryote genomes. Nucleic Acids Res 31:2187-2195.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2187-2195
-
-
Meyer, F.1
-
38
-
-
0346494926
-
TransportDB: A relational database of cellular membrane transport systems
-
Ren Q, Kang KH, Paulsen IT (2004) TransportDB: A relational database of cellular membrane transport systems. Nucleic Acids Res 32:D284-D288.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Ren, Q.1
Kang, K.H.2
Paulsen, I.T.3
|