-
1
-
-
0037972522
-
Mitochondrial respiratory-chain diseases
-
DiMauro, S., and Schon, E. A. (2003) Mitochondrial respiratory-chain diseases. N. Engl. J. Med. 348, 2656-2668
-
(2003)
N. Engl. J. Med.
, vol.348
, pp. 2656-2668
-
-
DiMauro, S.1
Schon, E.A.2
-
2
-
-
84869051280
-
Mitochondrial disorders as windows into an ancient organelle
-
Vafai, S. B., and Mootha, V. K. (2012) Mitochondrial disorders as windows into an ancient organelle. Nature 491, 374-383
-
(2012)
Nature
, vol.491
, pp. 374-383
-
-
Vafai, S.B.1
Mootha, V.K.2
-
3
-
-
34548420102
-
A novel mutation 3090 G→A of the mitochondrial 16S ribosomal RNA associated with myopathy
-
Coulbault, L., Deslandes, B., Herlicoviez, D., Read, M. H., Leporrier, N., Schaeffer, S., Mouadil, A., Lombès, A., Chapon, F., Jauzac, P., and Allouche, S. (2007) A novel mutation 3090 G→A of the mitochondrial 16S ribosomal RNA associated with myopathy. Biochem. Biophys. Res. Commun. 362, 601-605
-
(2007)
Biochem. Biophys. Res. Commun.
, vol.362
, pp. 601-605
-
-
Coulbault, L.1
Deslandes, B.2
Herlicoviez, D.3
Read, M.H.4
Leporrier, N.5
Schaeffer, S.6
Mouadil, A.7
Lombès, A.8
Chapon, F.9
Jauzac, P.10
Allouche, S.11
-
4
-
-
77956250214
-
Properties of the C-terminal tail of human mitochondrial inner membrane protein Oxa1L and its interactions with mammalian mitochondrial ribosomes
-
Haque, M. E., Elmore, K. B., Tripathy, A., Koc, H., Koc, E. C., and Spremulli, L. L. (2010) Properties of the C-terminal tail of human mitochondrial inner membrane protein Oxa1L and its interactions with mammalian mitochondrial ribosomes. J. Biol. Chem. 285, 28353-28362
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 28353-28362
-
-
Haque, M.E.1
Elmore, K.B.2
Tripathy, A.3
Koc, H.4
Koc, E.C.5
Spremulli, L.L.6
-
5
-
-
84894447703
-
The novel mitochondrial 16S rRNA 2336T→Cmutation is associated with hypertrophic cardiomyopathy
-
Liu, Z., Song, Y., Li, D., He, X., Li, S., Wu, B., Wang, W., Gu, S., Zhu, X., Wang, X., Zhou, Q., Dai, Y., and Yan, Q. (2014) The novel mitochondrial 16S rRNA 2336T→Cmutation is associated with hypertrophic cardiomyopathy. J. Med. Genet. 51, 176-184
-
(2014)
J. Med. Genet.
, vol.51
, pp. 176-184
-
-
Liu, Z.1
Song, Y.2
Li, D.3
He, X.4
Li, S.5
Wu, B.6
Wang, W.7
Gu, S.8
Zhu, X.9
Wang, X.10
Zhou, Q.11
Dai, Y.12
Yan, Q.13
-
6
-
-
0027226069
-
Mitochondrial ribosomal RNA mutation associated with both antibiotic-induced and non-syndromic deafness
-
Prezant, T. R., Agapian, J. V., Bohlman, M. C., Bu, X., Oztas, S., Qiu, W. Q., Arnos, K. S., Cortopassi, G. A., Jaber, L., Rotter, J. I., et al. (1993) Mitochondrial ribosomal RNA mutation associated with both antibiotic-induced and non-syndromic deafness. Nat. Genet. 4, 289-294
-
(1993)
Nat. Genet.
, vol.4
, pp. 289-294
-
-
Prezant, T.R.1
Agapian, J.V.2
Bohlman, M.C.3
Bu, X.4
Oztas, S.5
Qiu, W.Q.6
Arnos, K.S.7
Cortopassi, G.A.8
Jaber, L.9
Rotter, J.I.10
-
7
-
-
80054680488
-
Exome sequencing identifies MRPL3 mutation in mitochondrial cardiomyopathy
-
Galmiche, L., Serre, V., Beinat, M., Assouline, Z., Lebre, A. S., Chretien, D., Nietschke, P., Benes, V., Boddaert, N., Sidi, D., Brunelle, F., Rio, M., Munnich, A., and Rötig, A. (2011) Exome sequencing identifies MRPL3 mutation in mitochondrial cardiomyopathy. Hum. Mutat. 32, 1225-1231
-
(2011)
Hum. Mutat.
, vol.32
, pp. 1225-1231
-
-
Galmiche, L.1
Serre, V.2
Beinat, M.3
Assouline, Z.4
Lebre, A.S.5
Chretien, D.6
Nietschke, P.7
Benes, V.8
Boddaert, N.9
Sidi, D.10
Brunelle, F.11
Rio, M.12
Munnich, A.13
Rötig, A.14
-
8
-
-
0035416644
-
The human mitochondrial ribosomal protein genes: Mapping of 54 genes to the chromosomes and implications for human disorders
-
Kenmochi, N., Suzuki, T., Uechi, T., Magoori, M., Kuniba, M., Higa, S., Watanabe, K., and Tanaka, T. (2001) The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders. Genomics 77, 65-70
-
(2001)
Genomics
, vol.77
, pp. 65-70
-
-
Kenmochi, N.1
Suzuki, T.2
Uechi, T.3
Magoori, M.4
Kuniba, M.5
Higa, S.6
Watanabe, K.7
Tanaka, T.8
-
9
-
-
23644454808
-
Nuclear MRP genes and mitochondrial disease
-
O'Brien, T. W., O'Brien, B. J., and Norman, R. A. (2005) Nuclear MRP genes and mitochondrial disease. Gene 354, 147-151
-
(2005)
Gene
, vol.354
, pp. 147-151
-
-
O'Brien, T.W.1
O'Brien, B.J.2
Norman, R.A.3
-
10
-
-
84868628376
-
AFG3L2 supports mitochondrial protein synthesis and Purkinje cell survival
-
Almajan, E. R., Richter, R., Paeger, L., Martinelli, P., Barth, E., Decker, T., Larsson, N. G., Kloppenburg, P., Langer, T., and Rugarli, E. I. (2012) AFG3L2 supports mitochondrial protein synthesis and Purkinje cell survival. J. Clin. Invest. 122, 4048-4058
-
(2012)
J. Clin. Invest.
, vol.122
, pp. 4048-4058
-
-
Almajan, E.R.1
Richter, R.2
Paeger, L.3
Martinelli, P.4
Barth, E.5
Decker, T.6
Larsson, N.G.7
Kloppenburg, P.8
Langer, T.9
Rugarli, E.I.10
-
11
-
-
26844484821
-
The m-AAA protease defective in hereditary spastic paraplegia controls ribosome assembly in mitochondria
-
Nolden, M., Ehses, S., Koppen, M., Bernacchia, A., Rugarli, E. I., and Langer, T. (2005) The m-AAA protease defective in hereditary spastic paraplegia controls ribosome assembly in mitochondria. Cell 123, 277-289
-
(2005)
Cell
, vol.123
, pp. 277-289
-
-
Nolden, M.1
Ehses, S.2
Koppen, M.3
Bernacchia, A.4
Rugarli, E.I.5
Langer, T.6
-
12
-
-
84892797558
-
Architecture of the large subunit of the mammalian mitochondrial ribosome
-
Greber, B. J., Boehringer, D., Leitner, A., Bieri, P., Voigts-Hoffmann, F., Erzberger, J. P., Leibundgut, M., Aebersold, R., and Ban, N. (2014) Architecture of the large subunit of the mammalian mitochondrial ribosome. Nature 505, 515-519
-
(2014)
Nature
, vol.505
, pp. 515-519
-
-
Greber, B.J.1
Boehringer, D.2
Leitner, A.3
Bieri, P.4
Voigts-Hoffmann, F.5
Erzberger, J.P.6
Leibundgut, M.7
Aebersold, R.8
Ban, N.9
-
13
-
-
0035877697
-
Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome: Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria
-
Suzuki, T., Terasaki, M., Takemoto-Hori, C., Hanada, T., Ueda, T., Wada, A., and Watanabe, K. (2001) Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome: systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria. J. Biol. Chem. 276, 21724-21736
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 21724-21736
-
-
Suzuki, T.1
Terasaki, M.2
Takemoto-Hori, C.3
Hanada, T.4
Ueda, T.5
Wada, A.6
Watanabe, K.7
-
14
-
-
0032567490
-
Mammalian mitochondrial ribosomal proteins. N-terminal amino acid sequencing, characterization, and identification of corresponding gene sequences
-
Goldschmidt-Reisin, S., Kitakawa, M., Herfurth, E., Wittmann-Liebold, B., Grohmann, L., and Graack, H. R. (1998) Mammalian mitochondrial ribosomal proteins. N-terminal amino acid sequencing, characterization, and identification of corresponding gene sequences. J. Biol. Chem. 273, 34828-34836
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 34828-34836
-
-
Goldschmidt-Reisin, S.1
Kitakawa, M.2
Herfurth, E.3
Wittmann-Liebold, B.4
Grohmann, L.5
Graack, H.R.6
-
15
-
-
0033554850
-
Identification of mammalian mitochondrial ribosomal proteins (MRPs) by N-terminal sequencing of purified bovine MRPs and comparison to data bank sequences: The large subribosomal particle
-
Graack, H. R., Bryant, M. L., and O'Brien, T. W. (1999) Identification of mammalian mitochondrial ribosomal proteins (MRPs) by N-terminal sequencing of purified bovine MRPs and comparison to data bank sequences: the large subribosomal particle. Biochemistry 38, 16569-16577
-
(1999)
Biochemistry
, vol.38
, pp. 16569-16577
-
-
Graack, H.R.1
Bryant, M.L.2
O'Brien, T.W.3
-
16
-
-
0035106250
-
Identification of four proteins from the small subunit of the mammalian mitochondrial ribosome using a proteomics approach
-
Koc, E. C., Burkhart, W., Blackburn, K., Koc, H., Moseley, A., and Spremulli, L. L. (2001) Identification of four proteins from the small subunit of the mammalian mitochondrial ribosome using a proteomics approach. Protein Sci 10, 471-481
-
(2001)
Protein Sci
, vol.10
, pp. 471-481
-
-
Koc, E.C.1
Burkhart, W.2
Blackburn, K.3
Koc, H.4
Moseley, A.5
Spremulli, L.L.6
-
17
-
-
0035941287
-
The large subunit of the mammalian mitochondrial ribosome: Analysis of the complement of ribosomal proteins present
-
Koc, E. C., Burkhart, W., Blackburn, K., Moyer, M. B., Schlatzer, D. M., Moseley, A., and Spremulli, L. L. (2001) The large subunit of the mammalian mitochondrial ribosome: analysis of the complement of ribosomal proteins present. J. Biol. Chem. 276, 43958-43969
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 43958-43969
-
-
Koc, E.C.1
Burkhart, W.2
Blackburn, K.3
Moyer, M.B.4
Schlatzer, D.M.5
Moseley, A.6
Spremulli, L.L.7
-
18
-
-
84884580316
-
Identification and characterization of CHCHD1, AURKAIP1, and CRIF1 as new members of the mammalian mitochondrial ribosome
-
Koc, E. C., Cimen, H., Kumcuoglu, B., Abu, N., Akpinar, G., Haque, M. E., Spremulli, L. L., and Koc, H. (2013) Identification and characterization of CHCHD1, AURKAIP1, and CRIF1 as new members of the mammalian mitochondrial ribosome. Front. Physiol. 4, 183
-
(2013)
Front. Physiol.
, vol.4
, pp. 183
-
-
Koc, E.C.1
Cimen, H.2
Kumcuoglu, B.3
Abu, N.4
Akpinar, G.5
Haque, M.E.6
Spremulli, L.L.7
Koc, H.8
-
19
-
-
0033579466
-
Mammalian mitochondrial ribosomal proteins (2): Amino acid sequencing, characterization, and identification of corresponding gene sequences
-
O'Brien, T. W., Fiesler, S. E., Denslow, N. D., Thiede, B., Wittmann-Liebold, B., Mougey, E. B., Sylvester, J. E., and Graack, H. R. (1999) Mammalian mitochondrial ribosomal proteins (2): Amino acid sequencing, characterization, and identification of corresponding gene sequences. J. Biol. Chem. 274, 36043-36051
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 36043-36051
-
-
O'Brien, T.W.1
Fiesler, S.E.2
Denslow, N.D.3
Thiede, B.4
Wittmann-Liebold, B.5
Mougey, E.B.6
Sylvester, J.E.7
Graack, H.R.8
-
20
-
-
0034674626
-
Mammalian mitochondrial ribosomal proteins (4): Amino acid sequencing, characterization, and identification of corresponding gene sequences
-
O'Brien, T. W., Liu, J., Sylvester, J. E., Mougey, E. B., Fischel-Ghodsian, N., Thiede, B., Wittmann-Liebold, B., and Graack, H. R. (2000) Mammalian mitochondrial ribosomal proteins (4): Amino acid sequencing, characterization, and identification of corresponding gene sequences. J. Biol. Chem. 275, 18153-18159
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 18153-18159
-
-
O'Brien, T.W.1
Liu, J.2
Sylvester, J.E.3
Mougey, E.B.4
Fischel-Ghodsian, N.5
Thiede, B.6
Wittmann-Liebold, B.7
Graack, H.R.8
-
21
-
-
0035980117
-
Proteomic analysis of the mammalian mitochondrial ribosome: Identification of protein components in the 28 S small subunit
-
Suzuki, T., Terasaki, M., Takemoto-Hori, C., Hanada, T., Ueda, T., Wada, A., and Watanabe, K. (2001) Proteomic analysis of the mammalian mitochondrial ribosome: identification of protein components in the 28 S small subunit. J. Biol. Chem. 276, 33181-33195
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 33181-33195
-
-
Suzuki, T.1
Terasaki, M.2
Takemoto-Hori, C.3
Hanada, T.4
Ueda, T.5
Wada, A.6
Watanabe, K.7
-
22
-
-
0035831128
-
A new face on apoptosis: Death-associated protein 3 and PDCD9 are mitochondrial ribosomal proteins
-
Cavdar Koc, E., Ranasinghe, A., Burkhart, W., Blackburn, K., Koc, H., Moseley, A., and Spremulli, L. L. (2001) A new face on apoptosis: death-associated protein 3 and PDCD9 are mitochondrial ribosomal proteins. FEBS Lett. 492, 166-170
-
(2001)
FEBS Lett.
, vol.492
, pp. 166-170
-
-
Cavdar Koc, E.1
Ranasinghe, A.2
Burkhart, W.3
Blackburn, K.4
Koc, H.5
Moseley, A.6
Spremulli, L.L.7
-
23
-
-
7244239262
-
Functional role of death-associated protein 3 (DAP3) in anoikis
-
Miyazaki, T., Shen, M., Fujikura, D., Tosa, N., Kim, H. R., Kon, S., Uede, T., and Reed, J. C. (2004) Functional role of death-associated protein 3 (DAP3) in anoikis. J. Biol. Chem. 279, 44667-44672
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 44667-44672
-
-
Miyazaki, T.1
Shen, M.2
Fujikura, D.3
Tosa, N.4
Kim, H.R.5
Kon, S.6
Uede, T.7
Reed, J.C.8
-
24
-
-
84901020393
-
Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
-
Kaushal, P. S., Sharma, M. R., Booth, T. M., Haque, E. M., Tung, C. S., Sanbonmatsu, K. Y., Spremulli, L. L., and Agrawal, R. K. (2014) Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome. Proc. Natl. Acad. Sci. U.S.A. 111, 7284-7289
-
(2014)
Proc. Natl. Acad. Sci. U.S.A.
, vol.111
, pp. 7284-7289
-
-
Kaushal, P.S.1
Sharma, M.R.2
Booth, T.M.3
Haque, E.M.4
Tung, C.S.5
Sanbonmatsu, K.Y.6
Spremulli, L.L.7
Agrawal, R.K.8
-
25
-
-
84870392446
-
Structural aspects of mitochondrial translational apparatus
-
Agrawal, R. K., and Sharma, M. R. (2012) Structural aspects of mitochondrial translational apparatus. Curr. Opin. Struct. Biol. 22, 797-803
-
(2012)
Curr. Opin. Struct. Biol.
, vol.22
, pp. 797-803
-
-
Agrawal, R.K.1
Sharma, M.R.2
-
26
-
-
84897000112
-
Structure of the yeast mitochondrial large ribosomal subunit
-
Amunts, A., Brown, A., Bai, X.-C., Llácer, J. L., Hussain, T., Emsley, P., Long, F., Murshudov, G., Scheres, S. H. W., and Ramakrishnan, V. (2014) Structure of the yeast mitochondrial large ribosomal subunit. Science 343, 1485-1489
-
(2014)
Science
, vol.343
, pp. 1485-1489
-
-
Amunts, A.1
Brown, A.2
Bai, X.-C.3
Llácer, J.L.4
Hussain, T.5
Emsley, P.6
Long, F.7
Murshudov, G.8
Scheres, S.H.W.9
Ramakrishnan, V.10
-
27
-
-
33645106536
-
Astructural model for the large subunit of the mammalian mitochondrial ribosome
-
Mears, J. A., Sharma, M. R., Gutell, R. R., McCook, A. S., Richardson, P. E., Caulfield, T. R., Agrawal, R. K., and Harvey, S. C. (2006)Astructural model for the large subunit of the mammalian mitochondrial ribosome. J. Mol. Biol. 358, 193-212
-
(2006)
J. Mol. Biol.
, vol.358
, pp. 193-212
-
-
Mears, J.A.1
Sharma, M.R.2
Gutell, R.R.3
McCook, A.S.4
Richardson, P.E.5
Caulfield, T.R.6
Agrawal, R.K.7
Harvey, S.C.8
-
28
-
-
0141953259
-
Structure of the mammalian mitochondrial ribosome reveals an expanded functional role for its component proteins
-
Sharma, M. R., Koc, E. C., Datta, P. P., Booth, T. M., Spremulli, L. L., and Agrawal, R. K. (2003) Structure of the mammalian mitochondrial ribosome reveals an expanded functional role for its component proteins. Cell 115, 97-108
-
(2003)
Cell
, vol.115
, pp. 97-108
-
-
Sharma, M.R.1
Koc, E.C.2
Datta, P.P.3
Booth, T.M.4
Spremulli, L.L.5
Agrawal, R.K.6
-
29
-
-
84897527933
-
Initial steps in RNA processing and ribosome assembly occur at mitochondrial DNA nucleoids
-
Bogenhagen, D. F., Martin, D. W., and Koller, A. (2014) Initial steps in RNA processing and ribosome assembly occur at mitochondrial DNA nucleoids. Cell Metab. 19, 618-629
-
(2014)
Cell Metab.
, vol.19
, pp. 618-629
-
-
Bogenhagen, D.F.1
Martin, D.W.2
Koller, A.3
-
30
-
-
0037228525
-
Human mitochondrial transcription factor B1 methylates ribosomal RNA at a conserved stem-loop
-
Seidel-Rogol, B. L., McCulloch, V., and Shadel, G. S. (2003) Human mitochondrial transcription factor B1 methylates ribosomal RNA at a conserved stem-loop. Nat. Genet. 33, 23-24
-
(2003)
Nat. Genet.
, vol.33
, pp. 23-24
-
-
Seidel-Rogol, B.L.1
McCulloch, V.2
Shadel, G.S.3
-
31
-
-
84901741929
-
NSUN4 is a dual function mitochondrial protein required for both methylation of 12S rRNA and coordination of mitoribosomal assembly
-
Metodiev, M. D., Spa˚hr, H., Loguercio Polosa, P., Meharg, C., Becker, C., Altmueller, J., Habermann, B., Larsson, N. G., and Ruzzenente, B. (2014) NSUN4 is a dual function mitochondrial protein required for both methylation of 12S rRNA and coordination of mitoribosomal assembly. PLoS Genet. 10, e1004110
-
(2014)
PLoS Genet.
, vol.10
, pp. e1004110
-
-
Metodiev, M.D.1
Spa˚hr, H.2
Loguercio Polosa, P.3
Meharg, C.4
Becker, C.5
Altmueller, J.6
Habermann, B.7
Larsson, N.G.8
Ruzzenente, B.9
-
32
-
-
63449105579
-
Methylation of 12S rRNA is necessary for in vivo stability of the small subunit of the mammalian mitochondrial ribosome
-
Metodiev, M. D., Lesko, N., Park, C. B., Cámara, Y., Shi, Y., Wibom, R., Hultenby, K., Gustafsson, C. M., and Larsson, N. G. (2009) Methylation of 12S rRNA is necessary for in vivo stability of the small subunit of the mammalian mitochondrial ribosome. Cell Metab. 9, 386-397
-
(2009)
Cell Metab.
, vol.9
, pp. 386-397
-
-
Metodiev, M.D.1
Lesko, N.2
Park, C.B.3
Cámara, Y.4
Shi, Y.5
Wibom, R.6
Hultenby, K.7
Gustafsson, C.M.8
Larsson, N.G.9
-
33
-
-
0030785688
-
Eukaryotic ribosomal RNA: The recent excitement in the nucleotide modification problem
-
Maden, B. E., and Hughes, J. M. (1997) Eukaryotic ribosomal RNA: the recent excitement in the nucleotide modification problem. Chromosoma 105, 391-400
-
(1997)
Chromosoma
, vol.105
, pp. 391-400
-
-
Maden, B.E.1
Hughes, J.M.2
-
34
-
-
33845892140
-
Analysis of 2′-O-methylated nucleosides and pseudouridines in ribosomal RNAs using DNAzymes
-
Buchhaupt, M., Peifer, C., and Entian, K. D. (2007) Analysis of 2′-O-methylated nucleosides and pseudouridines in ribosomal RNAs using DNAzymes. Anal. Biochem. 361, 102-108
-
(2007)
Anal. Biochem.
, vol.361
, pp. 102-108
-
-
Buchhaupt, M.1
Peifer, C.2
Entian, K.D.3
-
35
-
-
0019887180
-
Methylated regions of hamster mitochondrial ribosomal RNA: Structural and functional correlates
-
Baer, R. J., and Dubin, D. T. (1981) Methylated regions of hamster mitochondrial ribosomal RNA: structural and functional correlates. Nucleic Acids Res. 9, 323-337
-
(1981)
Nucleic Acids Res.
, vol.9
, pp. 323-337
-
-
Baer, R.J.1
Dubin, D.T.2
-
36
-
-
0031581856
-
Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts
-
Ofengand, J., and Bakin, A. (1997) Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. J. Mol. Biol. 266, 246-268
-
(1997)
J. Mol. Biol.
, vol.266
, pp. 246-268
-
-
Ofengand, J.1
Bakin, A.2
-
37
-
-
84862227617
-
The post-transcriptional life of mammalian mitochondrial RNA
-
Rorbach, J., and Minczuk, M. (2012) The post-transcriptional life of mammalian mitochondrial RNA. Biochem. J. 444, 357-373
-
(2012)
Biochem. J.
, vol.444
, pp. 357-373
-
-
Rorbach, J.1
Minczuk, M.2
-
38
-
-
84886684284
-
Mitochondrial ribosomal RNA (rRNA) methyltransferase family members are positioned to modify nascent rRNA in foci near the mitochondrial DNA nucleoid
-
Lee, K. W., Okot-Kotber, C., LaComb, J. F., and Bogenhagen, D. F. (2013) Mitochondrial ribosomal RNA (rRNA) methyltransferase family members are positioned to modify nascent rRNA in foci near the mitochondrial DNA nucleoid. J. Biol. Chem. 288, 31386-31399
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 31386-31399
-
-
Lee, K.W.1
Okot-Kotber, C.2
LaComb, J.F.3
Bogenhagen, D.F.4
-
39
-
-
0035162971
-
The rlmB gene is essential for formation of Gm2251 in 23S rRNA but not for ribosome maturation in Escherichia coli
-
Lövgren, J. M., and Wikström, P. M. (2001) The rlmB gene is essential for formation of Gm2251 in 23S rRNA but not for ribosome maturation in Escherichia coli. J. Bacteriol. 183, 6957-6960
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6957-6960
-
-
Lövgren, J.M.1
Wikström, P.M.2
-
40
-
-
0028932720
-
Implications of a functional large ribosomal RNA with only three modified nucleotides
-
Sirum-Connolly, K., Peltier, J. M., Crain, P. F., McCloskey, J. A., and Mason, T. L. (1995) Implications of a functional large ribosomal RNA with only three modified nucleotides. Biochimie 77, 30-39
-
(1995)
Biochimie
, vol.77
, pp. 30-39
-
-
Sirum-Connolly, K.1
Peltier, J.M.2
Crain, P.F.3
McCloskey, J.A.4
Mason, T.L.5
-
41
-
-
0034596029
-
The FtsJ/RrmJ heat shock protein of Escherichia coli is a 23 S ribosomal RNA methyltransferase
-
Caldas, T., Binet, E., Bouloc, P., Costa, A., Desgres, J., and Richarme, G. (2000) The FtsJ/RrmJ heat shock protein of Escherichia coli is a 23 S ribosomal RNA methyltransferase. J. Biol. Chem. 275, 16414-16419
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 16414-16419
-
-
Caldas, T.1
Binet, E.2
Bouloc, P.3
Costa, A.4
Desgres, J.5
Richarme, G.6
-
42
-
-
0036500548
-
MRM2 encodes a novel yeast mitochondrial 21S rRNA methyltransferase
-
Pintard, L., Bujnicki, J. M., Lapeyre, B., and Bonnerot, C. (2002) MRM2 encodes a novel yeast mitochondrial 21S rRNA methyltransferase. EMBO J. 21, 1139-1147
-
(2002)
EMBO J.
, vol.21
, pp. 1139-1147
-
-
Pintard, L.1
Bujnicki, J.M.2
Lapeyre, B.3
Bonnerot, C.4
-
43
-
-
0030899226
-
A new method for detecting sites of 2′-O-methylation in RNA molecules
-
Yu, Y. T., Shu, M. D., and Steitz, J. A. (1997) A new method for detecting sites of 2′-O-methylation in RNA molecules. RNA 3, 324-331
-
(1997)
RNA
, vol.3
, pp. 324-331
-
-
Yu, Y.T.1
Shu, M.D.2
Steitz, J.A.3
-
44
-
-
33751088560
-
A systematic, ligation-based approach to study RNA modifications
-
Saikia, M., Dai, Q., Decatur, W. A., Fournier, M. J., Piccirilli, J. A., and Pan, T. (2006) A systematic, ligation-based approach to study RNA modifications. RNA 12, 2025-2033
-
(2006)
RNA
, vol.12
, pp. 2025-2033
-
-
Saikia, M.1
Dai, Q.2
Decatur, W.A.3
Fournier, M.J.4
Piccirilli, J.A.5
Pan, T.6
-
45
-
-
84869025816
-
RTL-P: A sensitive approach for detecting sites of 2′-O-methylation in RNA molecules
-
Dong, Z. W., Shao, P., Diao, L. T., Zhou, H., Yu, C. H., and Qu, L. H. (2012) RTL-P: a sensitive approach for detecting sites of 2′-O-methylation in RNA molecules. Nucleic Acids Res. 40, e157
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. e157
-
-
Dong, Z.W.1
Shao, P.2
Diao, L.T.3
Zhou, H.4
Yu, C.H.5
Qu, L.H.6
-
46
-
-
84863821425
-
Use of specific chemical reagents for detection of modified nucleotides in RNA
-
Behm-Ansmant, I., Helm, M., and Motorin, Y. (2011) Use of specific chemical reagents for detection of modified nucleotides in RNA. J. Nucleic Acids 2011, 408053
-
(2011)
J. Nucleic Acids
, vol.2011
, pp. 408053
-
-
Behm-Ansmant, I.1
Helm, M.2
Motorin, Y.3
-
47
-
-
0028949935
-
Classical and novel approaches to the detection and localization of the numerous modified nucleotides in eukaryotic ribosomal RNA
-
Maden, B. E., Corbett, M. E., Heeney, P. A., Pugh, K., and Ajuh, P. M. (1995) Classical and novel approaches to the detection and localization of the numerous modified nucleotides in eukaryotic ribosomal RNA. Biochimie 77, 22-29
-
(1995)
Biochimie
, vol.77
, pp. 22-29
-
-
Maden, B.E.1
Corbett, M.E.2
Heeney, P.A.3
Pugh, K.4
Ajuh, P.M.5
-
48
-
-
1142281951
-
Dinucleotide junction cleavage versatility of 8-17 deoxyribozyme
-
Cruz, R. P., Withers, J. B., and Li, Y. (2004) Dinucleotide junction cleavage versatility of 8-17 deoxyribozyme. Chem. Biol. 11, 57-67
-
(2004)
Chem. Biol.
, vol.11
, pp. 57-67
-
-
Cruz, R.P.1
Withers, J.B.2
Li, Y.3
-
49
-
-
21244501206
-
Northerns revisited: A protocol that eliminates formaldehyde from the gel while enhancing resolution and sensitivity
-
Vincze, E., and Bowra, S. (2005) Northerns revisited: a protocol that eliminates formaldehyde from the gel while enhancing resolution and sensitivity. Anal. Biochem. 342, 356-357
-
(2005)
Anal. Biochem.
, vol.342
, pp. 356-357
-
-
Vincze, E.1
Bowra, S.2
-
51
-
-
0035957430
-
Solution structure of the A loop of 23S ribosomal RNA
-
Blanchard, S. C., and Puglisi, J. D. (2001) Solution structure of the A loop of 23S ribosomal RNA. Proc. Natl. Acad. Sci. 98, 3720-3725
-
(2001)
Proc. Natl. Acad. Sci.
, vol.98
, pp. 3720-3725
-
-
Blanchard, S.C.1
Puglisi, J.D.2
-
52
-
-
0027300490
-
Post-transcriptional regulation of the steady-state levels of mitochondrial tRNAs in HeLa cells
-
King, M. P., and Attardi, G. (1993) Post-transcriptional regulation of the steady-state levels of mitochondrial tRNAs in HeLa cells. J. Biol. Chem. 268, 10228-10237
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 10228-10237
-
-
King, M.P.1
Attardi, G.2
-
53
-
-
84906982246
-
MRM2 and MRM3are involved in biogenesis of the large subunit of the mitochondrial ribosome
-
Rorbach, J., Boesch, P., Gammage, P. A., Nicholls, T. J. J., Pearce, S. F., Patel, D., Hauser, A., Perocchi, F., and Minczuk, M. (2014) MRM2 and MRM3are involved in biogenesis of the large subunit of the mitochondrial ribosome. Mol. Biol. Cell 10.1091/mbc.E14-01-0014
-
(2014)
Mol. Biol. Cell
-
-
Rorbach, J.1
Boesch, P.2
Gammage, P.A.3
Nicholls, T.J.J.4
Pearce, S.F.5
Patel, D.6
Hauser, A.7
Perocchi, F.8
Minczuk, M.9
-
54
-
-
0036629250
-
rRNA modifications and ribosome function
-
Decatur, W. A., and Fournier, M. J. (2002) rRNA modifications and ribosome function. Trends Biochem. Sci. 27, 344-351
-
(2002)
Trends Biochem. Sci.
, vol.27
, pp. 344-351
-
-
Decatur, W.A.1
Fournier, M.J.2
-
55
-
-
84893548247
-
Structural basis for regulation of ribosomal RNA 2′-o-methylation
-
Hengesbach, M., and Schwalbe, H. (2014) Structural basis for regulation of ribosomal RNA 2′-o-methylation. Angew Chem. Int. Ed. Engl. 53, 1742-1744
-
(2014)
Angew Chem. Int. Ed. Engl.
, vol.53
, pp. 1742-1744
-
-
Hengesbach, M.1
Schwalbe, H.2
-
56
-
-
84886953122
-
The structure of the box C/D enzyme reveals regulation of RNA methylation
-
Lapinaite, A., Simon, B., Skjaerven, L., Rakwalska-Bange, M., Gabel, F., and Carlomagno, T. (2013) The structure of the box C/D enzyme reveals regulation of RNA methylation. Nature 502, 519-523
-
(2013)
Nature
, vol.502
, pp. 519-523
-
-
Lapinaite, A.1
Simon, B.2
Skjaerven, L.3
Rakwalska-Bange, M.4
Gabel, F.5
Carlomagno, T.6
-
57
-
-
84868130511
-
6-methyladenosine RNA demethylase FTO inhibitor
-
6-methyladenosine RNA demethylase FTO inhibitor. J. Am. Chem. Soc. 134, 17963-17971
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 17963-17971
-
-
Chen, B.1
Ye, F.2
Yu, L.3
Jia, G.4
Huang, X.5
Zhang, X.6
Peng, S.7
Chen, K.8
Wang, M.9
Gong, S.10
Zhang, R.11
Yin, J.12
Li, H.13
Yang, Y.14
Liu, H.15
Zhang, J.16
Zhang, H.17
Zhang, A.18
Jiang, H.19
Luo, C.20
Yang, C.G.21
more..
-
58
-
-
84872847340
-
Reversible RNA adenosine methylation in biological regulation
-
Jia, G., Fu, Y., and He, C. (2013) Reversible RNA adenosine methylation in biological regulation. Trends Genet. 29, 108-115
-
(2013)
Trends Genet.
, vol.29
, pp. 108-115
-
-
Jia, G.1
Fu, Y.2
He, C.3
-
59
-
-
84872274463
-
ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility
-
Zheng, G., Dahl, J. A., Niu, Y., Fedorcsak, P., Huang, C. M., Li, C. J., Va˚gbø, C. B., Shi, Y., Wang, W. L., Song, S. H., Lu, Z., Bosmans, R. P., Dai, Q., Hao, Y. J., Yang, X., Zhao, W. M., Tong, W. M., Wang, X. J., Bogdan, F., Furu, K., Fu, Y., Jia, G., Zhao, X., Liu, J., Krokan, H. E., Klungland, A., Yang, Y. G., and He, C. (2013) ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility. Mol. Cell 49, 18-29
-
(2013)
Mol. Cell
, vol.49
, pp. 18-29
-
-
Zheng, G.1
Dahl, J.A.2
Niu, Y.3
Fedorcsak, P.4
Huang, C.M.5
Li, C.J.6
Va˚gbø, C.B.7
Shi, Y.8
Wang, W.L.9
Song, S.H.10
Lu, Z.11
Bosmans, R.P.12
Dai, Q.13
Hao, Y.J.14
Yang, X.15
Zhao, W.M.16
Tong, W.M.17
Wang, X.J.18
Bogdan, F.19
Furu, K.20
Fu, Y.21
Jia, G.22
Zhao, X.23
Liu, J.24
Krokan, H.E.25
Klungland, A.26
Yang, Y.G.27
He, C.28
more..
-
60
-
-
70349557671
-
Role of GTPases in bacterial ribosome assembly
-
Britton, R. A. (2009) Role of GTPases in bacterial ribosome assembly. Annu. Rev. Microbiol. 63, 155-176
-
(2009)
Annu. Rev. Microbiol.
, vol.63
, pp. 155-176
-
-
Britton, R.A.1
-
61
-
-
84864454280
-
Human C4orf14 interacts with the mitochondrial nucleoid and is involved in the biogenesis of the small mitochondrial ribosomal subunit
-
He, J., Cooper, H. M., Reyes, A., Di Re, M., Kazak, L., Wood, S. R., Mao, C. C., Fearnley, I. M., Walker, J. E., and Holt, I. J. (2012) Human C4orf14 interacts with the mitochondrial nucleoid and is involved in the biogenesis of the small mitochondrial ribosomal subunit. Nucleic Acids Res. 40, 6097-6108
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 6097-6108
-
-
He, J.1
Cooper, H.M.2
Reyes, A.3
Di Re, M.4
Kazak, L.5
Wood, S.R.6
Mao, C.C.7
Fearnley, I.M.8
Walker, J.E.9
Holt, I.J.10
-
62
-
-
78651104165
-
NOA1 is an essential GTPase required for mitochondrial protein synthesis
-
Kolanczyk, M., Pech, M., Zemojtel, T., Yamamoto, H., Mikula, I., Calvaruso, M. A., van den Brand, M., Richter, R., Fischer, B., Ritz, A., Kossler, N., Thurisch, B., Spoerle, R., Smeitink, J., Kornak, U., Chan, D., Vingron, M., Martasek, P., Lightowlers, R. N., Nijtmans, L., Schuelke, M., Nierhaus, K. H., and Mundlos, S. (2011) NOA1 is an essential GTPase required for mitochondrial protein synthesis. Mol. Biol. Cell 22, 1-11
-
(2011)
Mol. Biol. Cell
, vol.22
, pp. 1-11
-
-
Kolanczyk, M.1
Pech, M.2
Zemojtel, T.3
Yamamoto, H.4
Mikula, I.5
Calvaruso, M.A.6
Van Den Brand, M.7
Richter, R.8
Fischer, B.9
Ritz, A.10
Kossler, N.11
Thurisch, B.12
Spoerle, R.13
Smeitink, J.14
Kornak, U.15
Chan, D.16
Vingron, M.17
Martasek, P.18
Lightowlers, R.N.19
Nijtmans, L.20
Schuelke, M.21
Nierhaus, K.H.22
Mundlos, S.23
more..
-
63
-
-
84863786467
-
The putative GTPase encoded by MTG3 functions in a novel pathway for regulating assembly of the small subunit of yeast mitochondrial ribosomes
-
Paul, M. F., Alushin, G. M., Barros, M. H., Rak, M., and Tzagoloff, A. (2012) The putative GTPase encoded by MTG3 functions in a novel pathway for regulating assembly of the small subunit of yeast mitochondrial ribosomes. J. Biol. Chem. 287, 24346-24355
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 24346-24355
-
-
Paul, M.F.1
Alushin, G.M.2
Barros, M.H.3
Rak, M.4
Tzagoloff, A.5
-
64
-
-
41249098355
-
The layered structure of human mitochondrial DNA nucleoids
-
Bogenhagen, D. F., Rousseau, D., and Burke, S. (2008) The layered structure of human mitochondrial DNA nucleoids. J. Biol. Chem. 283, 3665-3675
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 3665-3675
-
-
Bogenhagen, D.F.1
Rousseau, D.2
Burke, S.3
-
65
-
-
77956658496
-
Human ERAL1 is a mitochondrial RNA chaperone involved in the assembly of the 28S small mitochondrial ribosomal subunit
-
Dennerlein, S., Rozanska, A., Wydro, M., Chrzanowska-Lightowlers, Z. M., and Lightowlers, R. N. (2010) Human ERAL1 is a mitochondrial RNA chaperone involved in the assembly of the 28S small mitochondrial ribosomal subunit. Biochem. J. 430, 551-558
-
(2010)
Biochem. J.
, vol.430
, pp. 551-558
-
-
Dennerlein, S.1
Rozanska, A.2
Wydro, M.3
Chrzanowska-Lightowlers, Z.M.4
Lightowlers, R.N.5
-
66
-
-
77956539977
-
ERAL1 is associated with mitochondrial ribosome and elimination of ERAL1 leads to mitochondrial dysfunction and growth retardation
-
Uchiumi, T., Ohgaki, K., Yagi, M., Aoki, Y., Sakai, A., Matsumoto, S., and Kang, D. (2010) ERAL1 is associated with mitochondrial ribosome and elimination of ERAL1 leads to mitochondrial dysfunction and growth retardation. Nucleic Acids Res. 38, 5554-5568
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 5554-5568
-
-
Uchiumi, T.1
Ohgaki, K.2
Yagi, M.3
Aoki, Y.4
Sakai, A.5
Matsumoto, S.6
Kang, D.7
-
67
-
-
65949090299
-
YgdE is the 2′-O-ribose methyltransferase RlmM specific for nucleotide C2498 in bacterial 23S rRNA
-
Purta, E., O'Connor, M., Bujnicki, J. M., and Douthwaite, S. (2009) YgdE is the 2′-O-ribose methyltransferase RlmM specific for nucleotide C2498 in bacterial 23S rRNA. Mol. Microbiol. 72, 1147-1158
-
(2009)
Mol. Microbiol.
, vol.72
, pp. 1147-1158
-
-
Purta, E.1
O'Connor, M.2
Bujnicki, J.M.3
Douthwaite, S.4
|