메뉴 건너뛰기




Volumn 111, Issue 33, 2014, Pages 12073-12078

The ribosome uses cooperative conformational changes to maximize and regulate the efficiency of translation

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC AGENT; TRANSFER RNA;

EID: 84906308939     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1401864111     Document Type: Article
Times cited : (35)

References (29)
  • 1
    • 0041821836 scopus 로고    scopus 로고
    • A perspective on enzyme catalysis
    • DOI 10.1126/science.1085515
    • Benkovic SJ, Hammes-Schiffer S (2003) A perspective on enzyme catalysis. Science 301(5637):1196-1202. (Pubitemid 37052200)
    • (2003) Science , vol.301 , Issue.5637 , pp. 1196-1202
    • Benkovic, S.J.1    Hammes-Schiffer, S.2
  • 2
    • 82455219011 scopus 로고    scopus 로고
    • Flexibility, diversity, and cooperativity: Pillars of enzyme catalysis
    • Hammes GG, Benkovic SJ, Hammes-Schiffer S (2011) Flexibility, diversity, and cooperativity: Pillars of enzyme catalysis. Biochemistry 50(48):10422-10430.
    • (2011) Biochemistry , vol.50 , Issue.48 , pp. 10422-10430
    • Hammes, G.G.1    Benkovic, S.J.2    Hammes-Schiffer, S.3
  • 3
    • 0026320866 scopus 로고
    • The energy landscapes and motions of proteins
    • Frauenfelder H, Sligar SG, Wolynes PG (1991) The energy landscapes and motions of proteins. Science 254(5038):1598-1603. (Pubitemid 21917496)
    • (1991) Science , vol.254 , Issue.5038 , pp. 1598-1603
    • Frauenfelder, H.1    Sligar, S.G.2    Wolynes, P.G.3
  • 4
    • 47649125643 scopus 로고    scopus 로고
    • Allosteric regulation and catalysis emerge via a common route
    • DOI 10.1038/nchembio.98, PII NCHEMBIO98
    • Goodey NM, Benkovic SJ (2008) Allosteric regulation and catalysis emerge via a common route. Nat Chem Biol 4(8):474-482. (Pubitemid 352019763)
    • (2008) Nature Chemical Biology , vol.4 , Issue.8 , pp. 474-482
    • Goodey, N.M.1    Benkovic, S.J.2
  • 6
    • 77953625418 scopus 로고    scopus 로고
    • Structure and dynamics of a processive Brownian motor: The translating ribosome
    • Frank J, Gonzalez RL, Jr (2010) Structure and dynamics of a processive Brownian motor: The translating ribosome. Annu Rev Biochem 79:381-412.
    • (2010) Annu Rev Biochem , vol.79 , pp. 381-412
    • Frank, J.1    Gonzalez Jr., R.L.2
  • 8
    • 65249132345 scopus 로고    scopus 로고
    • Ribosomal translocation: One step closer to the molecular mechanism
    • Shoji S, Walker SE, Fredrick K (2009) Ribosomal translocation: One step closer to the molecular mechanism. ACS Chem Biol 4(2):93-107.
    • (2009) ACS Chem Biol , vol.4 , Issue.2 , pp. 93-107
    • Shoji, S.1    Walker, S.E.2    Fredrick, K.3
  • 9
    • 79959655626 scopus 로고    scopus 로고
    • Biological mechanisms, one molecule at a time
    • Tinoco I, Jr, Gonzalez RL, Jr (2011) Biological mechanisms, one molecule at a time. Genes Dev 25(12):1205-1231.
    • (2011) Genes Dev , vol.25 , Issue.12 , pp. 1205-1231
    • Tinoco Jr., I.1    Gonzalez Jr., R.L.2
  • 10
    • 54049116765 scopus 로고    scopus 로고
    • Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome
    • Agirrezabala X, et al. (2008) Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome. Mol Cell 32(2):190-197.
    • (2008) Mol Cell , vol.32 , Issue.2 , pp. 190-197
    • Agirrezabala, X.1
  • 11
    • 79956303529 scopus 로고    scopus 로고
    • Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
    • Dunkle JA, et al. (2011) Structures of the bacterial ribosome in classical and hybrid states of tRNA binding. Science 332(6032):981-984.
    • (2011) Science , vol.332 , Issue.6032 , pp. 981-984
    • Dunkle, J.A.1
  • 13
    • 44449125068 scopus 로고    scopus 로고
    • Spontaneous Intersubunit Rotation in Single Ribosomes
    • DOI 10.1016/j.molcel.2008.05.004, PII S1097276508003341
    • Cornish PV, Ermolenko DN, Noller HF, Ha T (2008) Spontaneous intersubunit rotation in single ribosomes. Mol Cell 30(5):578-588. (Pubitemid 351760964)
    • (2008) Molecular Cell , vol.30 , Issue.5 , pp. 578-588
    • Cornish, P.V.1    Ermolenko, D.N.2    Noller, H.F.3    Ha, T.4
  • 14
    • 70349470607 scopus 로고    scopus 로고
    • Allosteric collaboration between elongation factor G and the ribosomal L1 stalk directs tRNA movements during translation
    • Fei J, et al. (2009) Allosteric collaboration between elongation factor G and the ribosomal L1 stalk directs tRNA movements during translation. Proc Natl Acad Sci USA 106(37):15702-15707.
    • (2009) Proc Natl Acad Sci USA , vol.106 , Issue.37 , pp. 15702-15707
    • Fei, J.1
  • 15
    • 62449216538 scopus 로고    scopus 로고
    • Following movement of the L1 stalk between three functional states in single ribosomes
    • Cornish PV, et al. (2009) Following movement of the L1 stalk between three functional states in single ribosomes. Proc Natl Acad Sci USA 106(8):2571-2576.
    • (2009) Proc Natl Acad Sci USA , vol.106 , Issue.8 , pp. 2571-2576
    • Cornish, P.V.1
  • 17
    • 84871769820 scopus 로고    scopus 로고
    • Contribution of intersubunit bridges to the energy barrier of ribosomal translocation
    • Liu Q, Fredrick K (2013) Contribution of intersubunit bridges to the energy barrier of ribosomal translocation. Nucleic Acids Res 41(1):565-574.
    • (2013) Nucleic Acids Res , vol.41 , Issue.1 , pp. 565-574
    • Liu, Q.1    Fredrick, K.2
  • 19
    • 18144409413 scopus 로고    scopus 로고
    • Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation
    • DOI 10.1016/j.jmb.2005.03.075, PII S0022283605003773
    • Cukras AR, Green R (2005) Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation. J Mol Biol 349(1):47-59. (Pubitemid 40616447)
    • (2005) Journal of Molecular Biology , vol.349 , Issue.1 , pp. 47-59
    • Cukras, A.R.1    Green, R.2
  • 20
    • 79955632736 scopus 로고    scopus 로고
    • Mutations in the intersubunit bridge regions of 16S rRNA affect decoding and subunit-subunit interactions on the 70S ribosome
    • Sun Q, Vila-Sanjurjo A, O'Connor M (2011) Mutations in the intersubunit bridge regions of 16S rRNA affect decoding and subunit-subunit interactions on the 70S ribosome. Nucleic Acids Res 39(8):3321-3330.
    • (2011) Nucleic Acids Res , vol.39 , Issue.8 , pp. 3321-3330
    • Sun, Q.1    Vila-Sanjurjo, A.2    O'Connor, M.3
  • 21
    • 42949126723 scopus 로고    scopus 로고
    • Coupling of Ribosomal L1 Stalk and tRNA Dynamics during Translation Elongation
    • DOI 10.1016/j.molcel.2008.03.012, PII S1097276508002128
    • Fei J, Kosuri P, MacDougall DD, Gonzalez RL, Jr (2008) Coupling of ribosomal L1 stalk and tRNA dynamics during translation elongation. Mol Cell 30(3):348-359. (Pubitemid 351615315)
    • (2008) Molecular Cell , vol.30 , Issue.3 , pp. 348-359
    • Fei, J.1    Kosuri, P.2    MacDougall, D.D.3    Gonzalez Jr., R.L.4
  • 23
    • 80052446046 scopus 로고    scopus 로고
    • Transfer RNA-mediated regulation of ribosome dynamics during protein synthesis
    • Fei J, Richard AC, Bronson JE, Gonzalez RL, Jr (2011) Transfer RNA-mediated regulation of ribosome dynamics during protein synthesis. Nat Struct Mol Biol 18(9):1043-1051.
    • (2011) Nat Struct Mol Biol , vol.18 , Issue.9 , pp. 1043-1051
    • Fei, J.1    Richard, A.C.2    Bronson, J.E.3    Gonzalez Jr., R.L.4
  • 24
    • 80053155455 scopus 로고    scopus 로고
    • Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3
    • Jin H, Kelley AC, Ramakrishnan V (2011) Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3. Proc Natl Acad Sci USA 108(38):15798-15803.
    • (2011) Proc Natl Acad Sci USA , vol.108 , Issue.38 , pp. 15798-15803
    • Jin, H.1    Kelley, A.C.2    Ramakrishnan, V.3
  • 27
    • 0032881809 scopus 로고    scopus 로고
    • X-ray crystal structures of 70S ribosome functional complexes
    • DOI 10.1126/science.285.5436.2095
    • Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF (1999) X-ray crystal structures of 70S ribosome functional complexes. Science 285(5436):2095-2104. (Pubitemid 29451422)
    • (1999) Science , vol.285 , Issue.5436 , pp. 2095-2104
    • Cate, J.H.1    Yusupov, M.M.2    Yusupova, G.Zh.3    Earnest, T.N.4    Noller, H.F.5
  • 28
    • 41449108157 scopus 로고    scopus 로고
    • An oxygen scavenging system for improvement of dye stability in single-molecule fluorescence experiments
    • Aitken CE, Marshall RA, Puglisi JD (2008) An oxygen scavenging system for improvement of dye stability in single-molecule fluorescence experiments. Biophys J 94(5):1826-1835.
    • (2008) Biophys J , vol.94 , Issue.5 , pp. 1826-1835
    • Aitken, C.E.1    Marshall, R.A.2    Puglisi, J.D.3
  • 29
    • 36248958685 scopus 로고    scopus 로고
    • Thiostrepton inhibition of tRNA delivery to the ribosome
    • DOI 10.1261/rna.499407
    • Gonzalez RL, Jr, Chu S, Puglisi JD (2007) Thiostrepton inhibition of tRNA delivery to the ribosome. RNA 13(12):2091-2097. (Pubitemid 350127551)
    • (2007) RNA , vol.13 , Issue.12 , pp. 2091-2097
    • Gonzalez Jr., R.L.1    Chu, S.2    Puglisi, J.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.