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Volumn 8401, Issue , 2014, Pages 271-300

Biomedical text mining: State-of-the-art, open problems and future challenges

Author keywords

Big data; hLDA; Knowledge discovery; LDA; LSA; Natural language processing; PCA; PLSA; Statistical models; SVM; Text classification; Text mining; Unstructured information

Indexed keywords

BIG DATA; CLASSIFICATION (OF INFORMATION); CLINICAL RESEARCH; DATA HANDLING; DECISION MAKING; LEARNING ALGORITHMS; MEDICAL IMAGING; NATURAL LANGUAGE PROCESSING SYSTEMS; PRINCIPAL COMPONENT ANALYSIS; SEMANTICS; STATISTICS; SUPPORT VECTOR MACHINES; TEXT PROCESSING;

EID: 84905218519     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-662-43968-5_16     Document Type: Article
Times cited : (59)

References (131)
  • 1
    • 84905228273 scopus 로고    scopus 로고
    • Knowledge discovery and interactive data mining in bioinformatics: State-of-the-art, future challenges and research directions
    • Holzinger, A., Dehmer, M., Jurisica, I.: Knowledge discovery and interactive data mining in bioinformatics: State-of-the-art, future challenges and research directions. BMC Bioinformatics 15(suppl. 6), I1 (2014)
    • (2014) BMC Bioinformatics , vol.15 , pp. 11
    • Holzinger, A.1    Dehmer, M.2    Jurisica, I.3
  • 5
    • 83255186011 scopus 로고    scopus 로고
    • Communication of clinically relevant information in electronic health records: A comparison between structured data and unrestricted physician language
    • Resnik, P., Niv, M., Nossal, M., Kapit, A., Toren, R.: Communication of clinically relevant information in electronic health records: a comparison between structured data and unrestricted physician language. In: CAC Proceedings of the Perspectives in Health Information Management (2008)
    • (2008) CAC Proceedings of the Perspectives in Health Information Management
    • Resnik, P.1    Niv, M.2    Nossal, M.3    Kapit, A.4    Toren, R.5
  • 7
    • 64849091826 scopus 로고    scopus 로고
    • Semantic information in medical information systems: Utilization of text mining techniques to analyze medical diagnoses
    • Holzinger, A., Geierhofer, R., Modritscher, F., Tatzl, R.: Semantic information in medical information systems: Utilization of text mining techniques to analyze medical diagnoses. Journal of Universal Computer Science 14(22), 3781-3795 (2008)
    • (2008) Journal of Universal Computer Science , vol.14 , Issue.22 , pp. 3781-3795
    • Holzinger, A.1    Geierhofer, R.2    Modritscher, F.3    Tatzl, R.4
  • 9
    • 84978140284 scopus 로고    scopus 로고
    • Natural language processing
    • In: Dubitzky, W., Wolkenhauer, O., Cho, K.H., Yokota, H. (eds.), Springer, Heidelberg
    • Verspoor, K., Cohen, K.: Natural language processing. In: Dubitzky, W., Wolkenhauer, O., Cho, K.H., Yokota, H. (eds.) Encyclopedia of Systems Biology, pp. 1495-1498. Springer, Heidelberg (2013)
    • (2013) Encyclopedia of Systems Biology , pp. 1495-1498
    • Verspoor, K.1    Cohen, K.2
  • 11
    • 34249815856 scopus 로고    scopus 로고
    • Semantische Informationsextraktion in medizinischen Informationssystemen
    • Holzinger, A., Geierhofer, R., Errath, M.: Semantische Informationsextraktion in medizinischen Informationssystemen. Informatik Spektrum 30(2), 69-78 (2007)
    • (2007) Informatik Spektrum , vol.30 , Issue.2 , pp. 69-78
    • Holzinger, A.1    Geierhofer, R.2    Errath, M.3
  • 13
    • 84927655645 scopus 로고    scopus 로고
    • Visual analysis and knowledge discovery for text
    • In: Gkoulalas-Divanis, A., Labbi, A. (eds.), Springer
    • Seifert, C., Sabol, V., Kienreich, W., Lex, E., Granitzer, M.: Visual analysis and knowledge discovery for text. In: Gkoulalas-Divanis, A., Labbi, A. (eds.) Large Scale Data Analytics, pp. 189-218. Springer (2014)
    • (2014) Large Scale Data Analytics , pp. 189-218
    • Seifert, C.1    Sabol, V.2    Kienreich, W.3    Lex, E.4    Granitzer, M.5
  • 18
    • 84948481845 scopus 로고
    • An algorithm for suffix stripping
    • Porter, M.: An algorithm for suffix stripping. Program 14(3), 130-137 (1980)
    • (1980) Program , vol.14 , Issue.3 , pp. 130-137
    • Porter, M.1
  • 19
    • 0016572913 scopus 로고
    • A vector space model for automatic indexing
    • Salton, G., Wong, A., Yang, C.: A vector space model for automatic indexing. Communications of the ACM 18(11), 620 (1975)
    • (1975) Communications of the ACM , vol.18 , Issue.11 , pp. 620
    • Salton, G.1    Wong, A.2    Yang, C.3
  • 20
    • 0016856636 scopus 로고
    • A vector model for perceived object rotation and translation in space
    • Boerjesson, E., Hofsten, C.: A vector model for perceived object rotation and translation in space. Psychological Research 38(2), 209-230 (1975)
    • (1975) Psychological Research , vol.38 , Issue.2 , pp. 209-230
    • Boerjesson, E.1    Hofsten, C.2
  • 21
    • 84957069814 scopus 로고    scopus 로고
    • Text categorization with suport vector machines: Learning with many relevant features
    • In: N´edellec, C., Rouveirol, C. (eds.), Springer, Heidelberg
    • Joachims, T.: Text categorization with suport vector machines: Learning with many relevant features. In: N´edellec, C., Rouveirol, C. (eds.) ECML 1998. LNCS, vol. 1398, pp. 137-142. Springer, Heidelberg (1998)
    • (1998) ECML 1998. LNCS , vol.1398 , pp. 137-142
    • Joachims, T.1
  • 22
    • 0028726791 scopus 로고
    • Connectionist model for information retrieval based on the vector space model
    • Crouch, C., Crouch, D., Nareddy, K.: Connectionist model for information retrieval based on the vector space model. International Journal of Expert Systems 7(2), 139-163 (1994)
    • (1994) International Journal of Expert Systems , vol.7 , Issue.2 , pp. 139-163
    • Crouch, C.1    Crouch, D.2    Nareddy, K.3
  • 23
    • 0343169734 scopus 로고    scopus 로고
    • A probabilistic model of information retrieval: Development and comparative experiments
    • Spärk Jones, K., Walker, S., Robertson, S.E.: A probabilistic model of information retrieval: development and comparative experiments. Inf. Process. Manage. 36(6) (2000)
    • (2000) Inf. Process. Manage , vol.36 , Issue.6
    • Spärk Jones, K.1    Walker, S.2    Robertson, S.E.3
  • 26
    • 1242318724 scopus 로고    scopus 로고
    • A review of content-based image retrieval systems in medical applications-clinical benefits and future directions
    • Müller, H., Michoux, N., Bandon, D., Geissbuhler, A.: A review of content-based image retrieval systems in medical applications-clinical benefits and future directions. International Journal of Medical Informatics 73(1), 1-23 (2003)
    • (2003) International Journal of Medical Informatics , vol.73 , Issue.1 , pp. 1-23
    • Müller, H.1    Michoux, N.2    Bandon, D.3    Geissbuhler, A.4
  • 27
    • 38149019839 scopus 로고    scopus 로고
    • A new hybrid summarizer based on vector space model, statistical physics and linguistics
    • In: Gelbukh, A., Kuri Morales,  A.F. (eds.), (LNAI), Springer, Heidelberg
    • da Cunha, I., Fernández, S., Velázquez Morales, P., Vivaldi, J., SanJuan, E., Torres-Moreno, J.-M.: A new hybrid summarizer based on vector space model, statistical physics and linguistics. In: Gelbukh, A., Kuri Morales,  A.F. (eds.) MICAI 2007. LNCS (LNAI), vol. 4827, pp. 872-882. Springer, Heidelberg (2007)
    • (2007) MICAI 2007. LNCS , vol.4827 , pp. 872-882
    • Da Cunha, I.1    Fernández, S.2    Velázquez Morales, P.3    Vivaldi, J.4    Sanjuan, E.5    Torres-Moreno, J.-M.6
  • 28
    • 0031146882 scopus 로고    scopus 로고
    • Semantic Vector Space Model: Implementation and Evaluation
    • Liu, G.: Semantic Vector Space Model: Implementation and Evaluation. Journal of the American Society for Information Science 48(5), 395-417 (1997)
    • (1997) Journal of the American Society for Information Science , vol.48 , Issue.5 , pp. 395-417
    • Liu, G.1
  • 29
    • 85032750972 scopus 로고    scopus 로고
    • Latent semantic mapping (Information retrieval)
    • Bellegarda, J.: Latent semantic mapping (information retrieval). IEEE Signal Processing Magazine 22(5), 70-80 (2005)
    • (2005) IEEE Signal Processing Magazine , vol.22 , Issue.5 , pp. 70-80
    • Bellegarda, J.1
  • 30
    • 0000600219 scopus 로고    scopus 로고
    • A solution to Plato’s problem: The latent semantic analysis theory of acquisition, induction, and representation of knowledge
    • Landauer, T., Dumais, S.: A solution to Plato’s problem: The latent semantic analysis theory of acquisition, induction, and representation of knowledge. Psychological Review 104(2), 211-240 (1997)
    • (1997) Psychological Review , vol.104 , Issue.2 , pp. 211-240
    • Landauer, T.1    Dumais, S.2
  • 31
    • 80053431219 scopus 로고    scopus 로고
    • An introduction to latent semantic analysis
    • Landauer, T., Foltz, P., Laham, D.: An introduction to latent semantic analysis. Discourse Processes 25, 259-284 (1998)
    • (1998) Discourse Processes , vol.25 , pp. 259-284
    • Landauer, T.1    Foltz, P.2    Laham, D.3
  • 32
    • 84937189426 scopus 로고    scopus 로고
    • The measurement of textual coherence with latent semantic analysis
    • Foltz, P., Kintsch, W., Landauer, T.: The measurement of textual coherence with latent semantic analysis. Discourse Processes 25, 285-308 (1998)
    • (1998) Discourse Processes , vol.25 , pp. 285-308
    • Foltz, P.1    Kintsch, W.2    Landauer, T.3
  • 33
    • 0036399197 scopus 로고    scopus 로고
    • The potential of latent semantic analysis for machine grading of clinical case summaries
    • Kintsch, W.: The potential of latent semantic analysis for machine grading of clinical case summaries. Journal of Biomedical Informatics 35(1), 3-7 (2002)
    • (2002) Journal of Biomedical Informatics , vol.35 , Issue.1 , pp. 3-7
    • Kintsch, W.1
  • 34
    • 55549086149 scopus 로고    scopus 로고
    • Simulating expert clinical comprehension: Adapting latent semantic analysis to accurately extract clinical concepts from psychiatric narrative
    • Cohen, T., Blatter, B., Patel, V.: Simulating expert clinical comprehension: adapting latent semantic analysis to accurately extract clinical concepts from psychiatric narrative. Journal of Biomedical Informatics 41(6), 1070-1087 (2008)
    • (2008) Journal of Biomedical Informatics , vol.41 , Issue.6 , pp. 1070-1087
    • Cohen, T.1    Blatter, B.2    Patel, V.3
  • 35
    • 41449086451 scopus 로고    scopus 로고
    • Ontology-based speech act identification in a bilingual dialog system using partial pattern trees
    • Yeh, J.F., Wu, C.H., Chen, M.J.: Ontology-based speech act identification in a bilingual dialog system using partial pattern trees. J. Am. Soc. Inf. Sci. Technol. 59(5), 684-694 (2008)
    • (2008) J. Am. Soc. Inf. Sci. Technol , vol.59 , Issue.5 , pp. 684-694
    • Yeh, J.F.1    Wu, C.H.2    Chen, M.J.3
  • 36
    • 71849108574 scopus 로고    scopus 로고
    • Combining hidden markov models and latent semantic analysis for topic segmentation and labeling: Method and clinical application. I
    • Ginter, F., Suominen, H., Pyysalo, S., Salakoski, T.: Combining hidden markov models and latent semantic analysis for topic segmentation and labeling: Method and clinical application. I. J. Medical Informatics 78(12), 1-6 (2009)
    • (2009) J. Medical Informatics , vol.78 , Issue.12 , pp. 1-6
    • Ginter, F.1    Suominen, H.2    Pyysalo, S.3    Salakoski, T.4
  • 41
    • 0034818212 scopus 로고    scopus 로고
    • Unsupervised Learning by Probabilistic Latent Semantic Analysis
    • Hofmann, T.: Unsupervised Learning by Probabilistic Latent Semantic Analysis. Machine Learning 42, 177-196 (2001)
    • (2001) Machine Learning , vol.42 , pp. 177-196
    • Hofmann, T.1
  • 42
    • 33744816484 scopus 로고    scopus 로고
    • A web recommendation technique based on probabilistic latent semantic analysis
    • In: Ngu, A.H.H., Kitsuregawa, M., Neuhold, E.J., Chung, J.-Y., Sheng, Q.Z. (eds.), Springer, Heidelberg
    • Xu, G., Zhang, Y., Zhou, X.: A web recommendation technique based on probabilistic latent semantic analysis. In: Ngu, A.H.H., Kitsuregawa, M., Neuhold, E.J., Chung, J.-Y., Sheng, Q.Z. (eds.) WISE 2005. LNCS, vol. 3806, pp. 15-28. Springer, Heidelberg (2005)
    • (2005) WISE 2005. LNCS , vol.3806 , pp. 15-28
    • Xu, G.1    Zhang, Y.2    Zhou, X.3
  • 43
    • 26944453988 scopus 로고    scopus 로고
    • Adjusting mixture weights of gaussian mixture model via regularized probabilistic latent semantic analysis
    • In: Ho, T.-B., Cheung, D., Liu, H. (eds.), Springer, Heidelberg
    • Si, L., Jin, R.: Adjusting mixture weights of gaussian mixture model via regularized probabilistic latent semantic analysis. In: Ho, T.-B., Cheung, D., Liu, H. (eds.) PAKDD 2005. LNCS (LNAI), vol. 3518, pp. 622-631. Springer, Heidelberg (2005)
    • (2005) PAKDD 2005. LNCS (LNAI) , vol.3518 , pp. 622-631
    • Si, L.1    Jin, R.2
  • 44
    • 24144482652 scopus 로고    scopus 로고
    • Using Probabilistic Latent Semantic Analysis for Personalized Web Search
    • In: Zhang, Y., Tanaka, K., Yu, J.X., Wang, S., Li, M. (eds.), Springer, Heidelberg
    • Lin, C., Xue, G., Zeng, H., Yu, Y.: Using Probabilistic Latent Semantic Analysis for Personalized Web Search. In: Zhang, Y., Tanaka, K., Yu, J.X., Wang, S., Li, M. (eds.) APWeb 2005. LNCS, vol. 3399, pp. 707-717. Springer, Heidelberg (2005)
    • (2005) Apweb 2005. LNCS , vol.3399 , pp. 707-717
    • Lin, C.1    Xue, G.2    Zeng, H.3    Yu, Y.4
  • 45
    • 22944449340 scopus 로고    scopus 로고
    • An intelligent grading system for descriptive examination papers based on probabilistic latent semantic analysis
    • In: Webb, G.I., Yu, X. (eds.), Springer, Heidelberg
    • Kim, Y.S., Oh, J.S., Lee, J.Y., Chang, J.H.: An intelligent grading system for descriptive examination papers based on probabilistic latent semantic analysis. In: Webb, G.I., Yu, X. (eds.) AI 2004. LNCS (LNAI), vol. 3339, pp. 1141-1146. Springer, Heidelberg (2004)
    • (2004) AI 2004. LNCS (LNAI) , vol.3339 , pp. 1141-1146
    • Kim, Y.S.1    Oh, J.S.2    Lee, J.Y.3    Chang, J.H.4
  • 47
    • 13444279975 scopus 로고    scopus 로고
    • Assisting medical annotation in swiss-prot using statistical classifiers. I
    • Dobrokhotov, P.B., Goutte, C., Veuthey, A.L., Gaussier, R.: Assisting medical annotation in swiss-prot using statistical classifiers. I. J. Medical Informatics 74(2-4), 317-324 (2005)
    • (2005) J. Medical Informatics , vol.74 , Issue.2-4 , pp. 317-324
    • Dobrokhotov, P.B.1    Goutte, C.2    Veuthey, A.L.3    Gaussier, R.4
  • 53
    • 33749659560 scopus 로고    scopus 로고
    • Applying latent Dirichlet allocation to automatic essay grading
    • In: Salakoski, T., Ginter, F., Pyysalo, S., Pahikkala, T. (eds.), Springer, Heidelberg
    • Kakkonen, T., Myller, N., Sutinen, E.: Applying latent Dirichlet allocation to automatic essay grading. In: Salakoski, T., Ginter, F., Pyysalo, S., Pahikkala, T. (eds.) FinTAL 2006. LNCS (LNAI), vol. 4139, pp. 110-120. Springer, Heidelberg (2006)
    • (2006) Fintal 2006. LNCS (LNAI) , vol.4139 , pp. 110-120
    • Kakkonen, T.1    Myller, N.2    Sutinen, E.3
  • 54
    • 34447336373 scopus 로고    scopus 로고
    • Employing latent dirichlet allocation for fraud detection in telecommunications
    • Xing, D., Girolami, M.: Employing latent dirichlet allocation for fraud detection in telecommunications. Pattern Recognition Letters 28(13), 1727-1734 (2007)
    • (2007) Pattern Recognition Letters , vol.28 , Issue.13 , pp. 1727-1734
    • Xing, D.1    Girolami, M.2
  • 55
    • 22044450174 scopus 로고    scopus 로고
    • Sequential activity profiling: Latent Dirichlet allocation of Markov chains
    • Girolami, M., Kaban, A.: Sequential activity profiling: Latent Dirichlet allocation of Markov chains. Data Mining and Knowledge Discovery 10(3), 175-196 (2005)
    • (2005) Data Mining and Knowledge Discovery , vol.10 , Issue.3 , pp. 175-196
    • Girolami, M.1    Kaban, A.2
  • 59
    • 84964987498 scopus 로고    scopus 로고
    • Clinical case-based retrieval using latent topic analysis
    • Arnold, C.W., El-Saden, S.M., Bui, A.A.T., Taira, R.: Clinical case-based retrieval using latent topic analysis. In: AMIA Annu. Symp. Proc., vol. 2010, pp. 26-30 (2010)
    • (2010) AMIA Annu. Symp. Proc. , vol.2010 , pp. 26-30
    • Arnold, C.W.1    El-Saden, S.M.2    Bui, A.3    Taira, R.4
  • 63
    • 84871854103 scopus 로고    scopus 로고
    • Next-generation phenotyping of electronic health records
    • Hripcsak, G., Albers, D.J.: Next-generation phenotyping of electronic health records. JAMIA 20(1), 117-121 (2013)
    • (2013) JAMIA , vol.20 , Issue.1 , pp. 117-121
    • Hripcsak, G.1    Albers, D.J.2
  • 64
    • 76849117578 scopus 로고    scopus 로고
    • The nested chinese restaurant process and bayesian nonparametric inference of topic hierarchies
    • Blei, D.M., Griffiths, T.L., Jordan, M.I.: The nested chinese restaurant process and bayesian nonparametric inference of topic hierarchies. J. ACM 57(2), 7:1-7:30 (2010)
    • (2010) J. ACM , vol.57 , Issue.2
    • Blei, D.M.1    Griffiths, T.L.2    Jordan, M.I.3
  • 66
    • 84927614069 scopus 로고    scopus 로고
    • Discovering shared and individual latent structure in multiple time series
    • Saria, S., Koller, D., Penn, A.: Discovering shared and individual latent structure in multiple time series. arXiv preprint arXiv:1008 (d), 1-9 (2028)
    • Arxiv Preprint Arxiv , vol.1008 , pp. 1-9
    • Saria, S.1    Koller, D.2    Penn, A.3
  • 67
    • 85162517687 scopus 로고    scopus 로고
    • Hierarchically Supervised Latent Dirichlet Allocation
    • Bartlett, N., Wood, F., Perotte, A.: Hierarchically Supervised Latent Dirichlet Allocation. In: NIPS, pp. 1-9 (2011)
    • (2011) NIPS , pp. 1-9
    • Bartlett, N.1    Wood, F.2    Perotte, A.3
  • 68
    • 58149421595 scopus 로고
    • Analysis of a complex of statistical variables into principal components
    • Hotelling, H.: Analysis of a complex of statistical variables into principal components. Journal of Educational Psychology 24(6), 417-441 (1933)
    • (1933) Journal of Educational Psychology , vol.24 , Issue.6 , pp. 417-441
    • Hotelling, H.1
  • 69
    • 0000325341 scopus 로고
    • LIII. On lines and planes of closest fit to systems of points in space
    • Pearson, K.: LIII. On lines and planes of closest fit to systems of points in space. Philosophical Magazine Series 6 2(11), 559-572 (1901)
    • (1901) Philosophical Magazine Series 6 , vol.2 , Issue.11 , pp. 559-572
    • Pearson, K.1
  • 70
    • 33746512512 scopus 로고    scopus 로고
    • Principal components analysis corrects for stratification in genome-wide association studies
    • Price, A.L., Patterson, N.J., Plenge, R.M., Weinblatt, M.E., Shadick, N.A., Reich, D.: Principal components analysis corrects for stratification in genome-wide association studies. Nat. Genet. 38(8), 904-909 (2006)
    • (2006) Nat. Genet , vol.38 , Issue.8 , pp. 904-909
    • Price, A.L.1    Patterson, N.J.2    Plenge, R.M.3    Weinblatt, M.E.4    Shadick, N.A.5    Reich, D.6
  • 72
    • 68149131790 scopus 로고    scopus 로고
    • Text mining and natural language processing approaches for automatic categorization of lay requests to web-based expert forums
    • Himmel, W., Reincke, U., Michelmann, H.W.: Text mining and natural language processing approaches for automatic categorization of lay requests to web-based expert forums. Journal of Medical Internet Research 11(3), e25 (2009)
    • (2009) Journal of Medical Internet Research , vol.11 , Issue.3
    • Himmel, W.1    Reincke, U.2    Michelmann, H.W.3
  • 73
    • 79958831734 scopus 로고    scopus 로고
    • Associating Drugs, Targets and Clinical Outcomes into an Integrated Network Affords a New Platform for Computer Aided Drug Repurposing
    • Oprea, T., Nielsen, S., Ursu, O.: Associating Drugs, Targets and Clinical Outcomes into an Integrated Network Affords a New Platform for Computer Aided Drug Repurposing. Molecular Informatics 30, 100-111 (2011)
    • (2011) Molecular Informatics , vol.30 , pp. 100-111
    • Oprea, T.1    Nielsen, S.2    Ursu, O.3
  • 74
    • 84956689194 scopus 로고    scopus 로고
    • Kernel principal component analysis
    • In: Gerstner, W., Hasler, M., Germond, A., Nicoud, J.-D. (eds.), Springer, Heidelberg
    • Schölkopf, B., Smola, A., Müller, K.R.: Kernel principal component analysis. In: Gerstner, W., Hasler, M., Germond, A., Nicoud, J.-D. (eds.) ICANN 1997. LNCS, vol. 1327, pp. 583-588. Springer, Heidelberg (1997)
    • (1997) ICANN 1997. LNCS , vol.1327 , pp. 583-588
    • Schölkopf, B.1    Smola, A.2    Müller, K.R.3
  • 75
    • 34249753618 scopus 로고
    • Support-vector networks
    • Cortes, C., Vapnik, V.: Support-vector networks. Mach. Learn. 20(3), 273-297 (1995)
    • (1995) Mach. Learn , vol.20 , Issue.3 , pp. 273-297
    • Cortes, C.1    Vapnik, V.2
  • 76
    • 77952766987 scopus 로고    scopus 로고
    • A user’s guide to support vector machines
    • In: Carugo, O., Eisenhaber, F. (eds.), Methods in Molecular Biology, Humana Press
    • Ben-Hur, A., Weston, J.: A user’s guide to support vector machines. In: Carugo, O., Eisenhaber, F. (eds.) Data Mining Techniques for the Life Sciences. Methods in Molecular Biology, vol. 609, pp. 223-239. Humana Press (2010)
    • (2010) Data Mining Techniques for the Life Sciences , vol.609 , pp. 223-239
    • Ben-Hur, A.1    Weston, J.2
  • 77
    • 0010442827 scopus 로고    scopus 로고
    • On the algorithmic implementation of multiclass kernelbased vector machines
    • Crammer, K., Singer, Y.: On the algorithmic implementation of multiclass kernelbased vector machines. J. Mach. Learn. Res. 2, 265-292 (2002)
    • (2002) J. Mach. Learn. Res , vol.2 , pp. 265-292
    • Crammer, K.1    Singer, Y.2
  • 78
    • 0036161259 scopus 로고    scopus 로고
    • Gene selection for cancer classification using support vector machines
    • Guyon, I., Weston, J., Barnhill, S., Vapnik, V.: Gene selection for cancer classification using support vector machines. Mach. Learn. 46(1-3), 389-422 (2002)
    • (2002) Mach. Learn , vol.46 , Issue.1-3 , pp. 389-422
    • Guyon, I.1    Weston, J.2    Barnhill, S.3    Vapnik, V.4
  • 79
    • 0742306588 scopus 로고    scopus 로고
    • Automatic scientific text classification using local patterns: Kdd cup 2002 (task 1)
    • Ghanem, M., Guo, Y., Lodhi, H., Zhang, Y.: Automatic scientific text classification using local patterns: Kdd cup 2002 (task 1). SIGKDD Explorations 4(2), 95-96 (2002)
    • (2002) SIGKDD Explorations , vol.4 , Issue.2 , pp. 95-96
    • Ghanem, M.1    Guo, Y.2    Lodhi, H.3    Zhang, Y.4
  • 81
    • 2442687039 scopus 로고    scopus 로고
    • Combining text mining and sequence analysis to discover protein functional regions
    • Altman, R.B., Dunker, A.K., Hunter, L., Jung, T.A., Klein, T.E. (eds.), World Scientific
    • Eskin, E., Agichtein, E.: Combining text mining and sequence analysis to discover protein functional regions. In: Altman, R.B., Dunker, A.K., Hunter, L., Jung, T.A., Klein, T.E. (eds.) Pacific Symposium on Biocomputing, pp. 288-299. World Scientific (2004)
    • (2004) Pacific Symposium on Biocomputing , pp. 288-299
    • Eskin, E.1    Agichtein, E.2
  • 82
    • 33750708689 scopus 로고    scopus 로고
    • A comparative study of support vector machines applied to the supervised word sense disambiguation problem in the medical domain
    • Joshi, M., Pedersen, T., Maclin, R.: A comparative study of support vector machines applied to the supervised word sense disambiguation problem in the medical domain. In: Prasad, B. (ed.) IICAI, pp. 3449-3468 (2005)
    • (2005) IICAI , pp. 3449-3468
    • Joshi, M.1    Pedersen, T.2    Maclin, R.3
  • 83
    • 84872234230 scopus 로고    scopus 로고
    • Evaluating the state of the art in coreference resolution for electronic medical records
    • Uzuner, Z., Bodnari, A., Shen, S., Forbush, T., Pestian, J., South, B.R.: Evaluating the state of the art in coreference resolution for electronic medical records. JAMIA 19(5), 786-791 (2012)
    • (2012) JAMIA , vol.19 , Issue.5 , pp. 786-791
    • Uzuner, Z.1    Bodnari, A.2    Shen, S.3    Forbush, T.4    Pestian, J.5    South, B.R.6
  • 84
    • 0031269184 scopus 로고    scopus 로고
    • On the optimality of the simple bayesian classifier under zero-one loss
    • Domingos, P., Pazzani, M.: On the optimality of the simple bayesian classifier under zero-one loss. Mach. Learn. 29(2-3), 103-130 (1997)
    • (1997) Mach. Learn , vol.29 , Issue.2-3 , pp. 103-130
    • Domingos, P.1    Pazzani, M.2
  • 86
    • 84924352812 scopus 로고    scopus 로고
    • Bionlp shared task
    • In: Dubitzky, W., Wolkenhauer, O., Cho, K.H., Yokota, H. (eds.), Springer, New York
    • Kim, J.D., Pyysalo, S.: Bionlp shared task. In: Dubitzky, W., Wolkenhauer, O., Cho, K.H., Yokota, H. (eds.) Encyclopedia of Systems Biology, pp. 138-141. Springer, New York (2013)
    • (2013) Encyclopedia of Systems Biology , pp. 138-141
    • Kim, J.D.1    Pyysalo, S.2
  • 88
    • 58149242540 scopus 로고    scopus 로고
    • Trec genomics special issue overview
    • Hersh, W., Voorhees, E.: Trec genomics special issue overview. Information Retrieval 12(1), 1-15 (2009)
    • (2009) Information Retrieval , vol.12 , Issue.1 , pp. 1-15
    • Hersh, W.1    Voorhees, E.2
  • 89
    • 4944229711 scopus 로고    scopus 로고
    • Genia corpus: A semantically annotated corpus for bio-textmining
    • Kim, J.D., Ohta, T., Tateisi, Y., Tsujii, J.: Genia corpus: a semantically annotated corpus for bio-textmining. Bioinformatics 19(suppl. 1), i180-i182 (2003)
    • (2003) Bioinformatics , vol.19 , pp. i180-i182
    • Kim, J.D.1    Ohta, T.2    Tateisi, Y.3    Tsujii, J.4
  • 97
    • 84886418080 scopus 로고    scopus 로고
    • Overview of the share/clef ehealth evaluation lab 2013
    • Forner, P., Müller, H., Paredes, R., Rosso, P., Stein, B. (eds.), Springer, Heidelberg
    • Suominen, H., et al.: Overview of the share/clef ehealth evaluation lab 2013. In: Forner, P., Müller, H., Paredes, R., Rosso, P., Stein, B. (eds.) CLEF 2013. LNCS, vol. 8138, pp. 212-231. Springer, Heidelberg (2013)
    • (2013) CLEF 2013. LNCS , vol.8138 , pp. 212-231
    • Suominen, H.1
  • 98
    • 17244380380 scopus 로고    scopus 로고
    • A survey of current work in biomedical text mining
    • Cohen, A.M., Hersh, W.R.: A survey of current work in biomedical text mining. Briefings in Bioinformatics 6(1), 57-71 (2005)
    • (2005) Briefings in Bioinformatics , vol.6 , Issue.1 , pp. 57-71
    • Cohen, A.M.1    Hersh, W.R.2
  • 101
    • 75749095148 scopus 로고    scopus 로고
    • New challenges for biological text-mining in the next decade
    • Dai, H.J., Chang, Y.C., Tsai, R.T.H., Hsu, W.L.: New challenges for biological text-mining in the next decade. J. Comput. Sci. Technol. 25(1), 169-179 (2009)
    • (2009) J. Comput. Sci. Technol , vol.25 , Issue.1 , pp. 169-179
    • Dai, H.J.1    Chang, Y.C.2    Tsai, R.3    Hsu, W.L.4
  • 107
    • 85121818405 scopus 로고    scopus 로고
    • Extraction of named entities from tables in gene mutation literature
    • Wong, W., Martinez, D., Cavedon, L.: Extraction of named entities from tables in gene mutation literature. In: BioNLP 2009, p. 46 (2009)
    • (2009) Bionlp 2009
    • Wong, W.1    Martinez, D.2    Cavedon, L.3
  • 108
    • 79960022996 scopus 로고    scopus 로고
    • Annotating and searching web tables using entities, types and relationships
    • Limaye, G., Sarawagi, S., Chakrabarti, S.: Annotating and searching web tables using entities, types and relationships. In: Proc. VLDB Endow., vol. 3(1-2), pp. 1338-1347 (September 2010)
    • (2010) Proc. VLDB Endow. , vol.3 , Issue.1-2 , pp. 1338-1347
    • Limaye, G.1    Sarawagi, S.2    Chakrabarti, S.3
  • 111
  • 112
    • 0036828375 scopus 로고    scopus 로고
    • Automatic Resolution of Ambiguous Terms Based on Machine Learning and Conceptual Relations in the UMLS
    • Liu, H., Johnson, S.B., Friedman, C.: Automatic Resolution of Ambiguous Terms Based on Machine Learning and Conceptual Relations in the UMLS. Journal of the American Medical Informatics Association 9(6), 621-636 (2002)
    • (2002) Journal of the American Medical Informatics Association , vol.9 , Issue.6 , pp. 621-636
    • Liu, H.1    Johnson, S.B.2    Friedman, C.3
  • 116
    • 85119405072 scopus 로고    scopus 로고
    • Improving syntactic coordination resolution using language modeling
    • Association for Computational Linguistics, Stroudsburg
    • Ogren, P.V.: Improving syntactic coordination resolution using language modeling. In: Proceedings of the NAACL HLT 2010 Student Research Workshop, HLT-SRWS 2010, pp. 1-6. Association for Computational Linguistics, Stroudsburg (2010)
    • (2010) Proceedings of the NAACL HLT 2010 Student Research Workshop, HLT-SRWS 2010 , pp. 1-6
    • Ogren, P.V.1
  • 120
    • 84874280242 scopus 로고    scopus 로고
    • The genia event and protein coreference tasks of the bionlp shared task 2011
    • Kim, J.D., Nguyen, N., Wang, Y., Tsujii, J., Takagi, T., Yonezawa, A.: The genia event and protein coreference tasks of the bionlp shared task 2011. BMC Bioinformatics 13(suppl. 11), S1 (2012)
    • (2012) BMC Bioinformatics , vol.13 , pp. S1
    • Kim, J.D.1    Nguyen, N.2    Wang, Y.3    Tsujii, J.4    Takagi, T.5    Yonezawa, A.6
  • 121
    • 84879858848 scopus 로고    scopus 로고
    • On knowledge discovery in open medical data on the example of the fda drug adverse event reporting system for alendronate (Fosamax)
    • In: Holzinger, A., Pasi, G. (eds.), Springer, Heidelberg
    • Yildirim, P., Ekmekci, I.O., Holzinger, A.: On knowledge discovery in open medical data on the example of the fda drug adverse event reporting system for alendronate (fosamax). In: Holzinger, A., Pasi, G. (eds.) HCI-KDD 2013. LNCS, vol. 7947, pp. 195-206. Springer, Heidelberg (2013)
    • (2013) HCI-KDD 2013. LNCS , vol.7947 , pp. 195-206
    • Yildirim, P.1    Ekmekci, I.O.2    Holzinger, A.3
  • 122
    • 84905265299 scopus 로고    scopus 로고
    • On topological data mining
    • In: Holzinger, A., Jurisica, I. (eds.), Springer, Heidelberg
    • Holzinger, A.: On topological data mining. In: Holzinger, A., Jurisica, I. (eds.) Knowledge Discovery and Data Mining. LNCS, vol. 8401, pp. 333-358. Springer, Heidelberg (2014)
    • (2014) Knowledge Discovery and Data Mining. LNCS , vol.8401 , pp. 333-358
    • Holzinger, A.1
  • 123
    • 84927600853 scopus 로고    scopus 로고
    • Darwin or lamarck? Future challenges in evolutionary algorithms for knowledge discovery and data mining
    • In: Holzinger, A., Jurisica, I. (eds.), Springer, Heidelberg
    • Holzinger, K., Palade, V., Rabadan, R., Holzinger, A.: Darwin or lamarck? future challenges in evolutionary algorithms for knowledge discovery and data mining. In: Holzinger, A., Jurisica, I. (eds.) Knowledge Discovery and Data Mining. LNCS, vol. 8401, pp. 35-56. Springer, Heidelberg (2014)
    • (2014) Knowledge Discovery and Data Mining. LNCS , vol.8401 , pp. 35-56
    • Holzinger, K.1    Palade, V.2    Rabadan, R.3    Holzinger, A.4
  • 125
    • 84879857005 scopus 로고    scopus 로고
    • Opinion mining on the web 2.0-characteristics of user generated content and their impacts
    • In: Holzinger, A., Pasi, G. (eds.), Springer, Heidelberg
    • Petz, G., Karpowicz, M., Fürschus, H., Auinger, A., Stríteský, V., Holzinger, A.: Opinion mining on the web 2.0-characteristics of user generated content and their impacts. In: Holzinger, A., Pasi, G. (eds.) HCI-KDD 2013. LNCS, vol. 7947, pp. 35-46. Springer, Heidelberg (2013)
    • (2013) HCI-KDD 2013. LNCS , vol.7947 , pp. 35-46
    • Petz, G.1    Karpowicz, M.2    Fürschus, H.3    Auinger, A.4    Stríteský, V.5    Holzinger, A.6
  • 128
    • 84875354939 scopus 로고    scopus 로고
    • Exploiting online discussions to discover unrecognized drug side effects
    • Wu, H., Fang, H., Stanhope, S.J.: Exploiting online discussions to discover unrecognized drug side effects. Methods of Information in Medicine 52(2), 152-159 (2013)
    • (2013) Methods of Information in Medicine , vol.52 , Issue.2 , pp. 152-159
    • Wu, H.1    Fang, H.2    Stanhope, S.J.3
  • 129
    • 84907400747 scopus 로고    scopus 로고
    • Knowledge discovery of drug data on the example of adverse reaction prediction
    • Yildirim, P., Majnaric, L., Ekmekci, O., Holzinger, A.: Knowledge discovery of drug data on the example of adverse reaction prediction. BMC Bioinformatics 15(suppl. 6), S7 (2014)
    • (2014) BMC Bioinformatics , vol.15 , pp. S7
    • Yildirim, P.1    Majnaric, L.2    Ekmekci, O.3    Holzinger, A.4
  • 130
    • 84905270610 scopus 로고    scopus 로고
    • Knowledge discovery and data mining in biomedical informatics: The future is in integrative, interactive machine learning solutions
    • In: Holzinger, A., Jurisica, I. (eds.), Springer, Heidelberg
    • Holzinger, A., Jurisica, I.: Knowledge discovery and data mining in biomedical informatics: The future is in integrative, interactive machine learning solutions. In: Holzinger, A., Jurisica, I. (eds.) Knowledge Discovery and Data Mining. LNCS, vol. 8401, pp. 1-18. Springer, Heidelberg (2014)
    • (2014) Knowledge Discovery and Data Mining. LNCS , vol.8401 , pp. 1-18
    • Holzinger, A.1    Jurisica, I.2
  • 131
    • 84879878402 scopus 로고    scopus 로고
    • Combining hci, natural language processing, and knowledge discovery-potential of ibm content analytics as an assistive technology in the biomedical domain
    • In: Holzinger, A., Pasi, G. (eds.), Springer, Heidelberg
    • Holzinger, A., Stocker, C., Ofner, B., Prohaska, G., Brabenetz, A., Hofmann-Wellenhof, R.: Combining hci, natural language processing, and knowledge discovery-potential of ibm content analytics as an assistive technology in the biomedical domain. In: Holzinger, A., Pasi, G. (eds.) HCI-KDD 2013. LNCS, vol. 7947, pp. 13-24. Springer, Heidelberg (2013)
    • (2013) HCI-KDD 2013. LNCS , vol.7947 , pp. 13-24
    • Holzinger, A.1    Stocker, C.2    Ofner, B.3    Prohaska, G.4    Brabenetz, A.5    Hofmann-Wellenhof, R.6


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