메뉴 건너뛰기




Volumn 10, Issue 4, 2014, Pages 937-951

Stress-induced transcriptional activation of retrotransposon-like sequences in the Scots pine (Pinus sylvestris L.) genome

Author keywords

Chloroplast insertions; Non coding RNA; Retrotransposon; Scots pine; Transcription; Transposon

Indexed keywords


EID: 84904541292     PISSN: 16142942     EISSN: 16142950     Source Type: Journal    
DOI: 10.1007/s11295-014-0733-1     Document Type: Article
Times cited : (49)

References (85)
  • 1
    • 33749326623 scopus 로고    scopus 로고
    • En/Spm-like transposons in Poaceae species: transposase sequence variability and chromosomal distribution
    • Altinkut A, Raskina O, Nevo E, Belyayev A (2006) En/Spm-like transposons in Poaceae species: transposase sequence variability and chromosomal distribution. Cell Mol Biol Lett 11(2): 214-230.
    • (2006) Cell Mol Biol Lett , vol.11 , Issue.2 , pp. 214-230
    • Altinkut, A.1    Raskina, O.2    Nevo, E.3    Belyayev, A.4
  • 2
    • 41349116279 scopus 로고    scopus 로고
    • Characterization of a 1-aminocyclopropane-1-carboxylate synthase gene from loblolly pine (Pinus taeda L.)
    • Barnes JR, Lorenz WW, Dean JFD (2008) Characterization of a 1-aminocyclopropane-1-carboxylate synthase gene from loblolly pine (Pinus taeda L.). Gene 413: 18-31.
    • (2008) Gene , vol.413 , pp. 18-31
    • Barnes, J.R.1    Lorenz, W.W.2    Dean, J.F.D.3
  • 3
    • 0034830923 scopus 로고    scopus 로고
    • Three Tnt1 subfamilies show different stress-associated patterns of expression in tobacco. Consequences for retrotransposon control and evolution in plants
    • Beguiristain T, Grandbastien MA, Puigdomènech P, Casacuberta JM (2001) Three Tnt1 subfamilies show different stress-associated patterns of expression in tobacco. Consequences for retrotransposon control and evolution in plants. Plant Physiol 127: 212-221.
    • (2001) Plant Physiol , vol.127 , pp. 212-221
    • Beguiristain, T.1    Grandbastien, M.A.2    Puigdomènech, P.3    Casacuberta, J.M.4
  • 4
    • 0031046820 scopus 로고    scopus 로고
    • Comparative analysis of the chromosomal and genomic organization of Ty-copia-like retrotransposons in pteridophytes, gymnosperms and angiosperms
    • Brandes A, Heslop-Harrison JS, Kamm A, Kubis S, Doudrick RL, Schmidt T (1997) Comparative analysis of the chromosomal and genomic organization of Ty-copia-like retrotransposons in pteridophytes, gymnosperms and angiosperms. Plant Mol Biol 33: 11-21.
    • (1997) Plant Mol Biol , vol.33 , pp. 11-21
    • Brandes, A.1    Heslop-Harrison, J.S.2    Kamm, A.3    Kubis, S.4    Doudrick, R.L.5    Schmidt, T.6
  • 6
    • 0033800838 scopus 로고    scopus 로고
    • Stress and transposable elements: co-evolution or useful parasites?
    • Capy P, Gasperi G, Biemont C, Bazin C (2000) Stress and transposable elements: co-evolution or useful parasites? Heredity 85: 101-106.
    • (2000) Heredity , vol.85 , pp. 101-106
    • Capy, P.1    Gasperi, G.2    Biemont, C.3    Bazin, C.4
  • 7
    • 0033592921 scopus 로고    scopus 로고
    • Molecular characterization of a mutable pigmentation phenotype and isolation of the first active transposable element from Sorghum bicolor
    • Chopra S, Brendel V, Zhang J, Axtell JD, Peterson T (1999) Molecular characterization of a mutable pigmentation phenotype and isolation of the first active transposable element from Sorghum bicolor. Proc Natl Acad Sci U S A 96: 15330-15335.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 15330-15335
    • Chopra, S.1    Brendel, V.2    Zhang, J.3    Axtell, J.D.4    Peterson, T.5
  • 8
    • 70350232064 scopus 로고    scopus 로고
    • Endogenous retroviral LTRs as promoters for human genes: a critical assessment
    • Cohen CJ, Lock WM, Marger DL (2009) Endogenous retroviral LTRs as promoters for human genes: a critical assessment. Gene 448: 105-114.
    • (2009) Gene , vol.448 , pp. 105-114
    • Cohen, C.J.1    Lock, W.M.2    Marger, D.L.3
  • 9
    • 84860417116 scopus 로고    scopus 로고
    • A computational study of the dynamics of LTR retrotransposons in the Populus trichocarpa genome
    • Cossu RM, Buti M, Giordani T, Natali L, Cavallini A (2012) A computational study of the dynamics of LTR retrotransposons in the Populus trichocarpa genome. Tree Genet Genomes 8(1): 61-75.
    • (2012) Tree Genet Genomes , vol.8 , Issue.1 , pp. 61-75
    • Cossu, R.M.1    Buti, M.2    Giordani, T.3    Natali, L.4    Cavallini, A.5
  • 10
    • 84859715656 scopus 로고    scopus 로고
    • Analysis of plant LTR-retrotransposons at the fine scale family level reveals individual molecular patterns
    • doi:10.1186/1471-2164-13-137
    • Domingues DS, Cruz GMQ, Metcalfe CJ, Nogueira FTS, Vicentini R, Alves C, Sluys M (2012) Analysis of plant LTR-retrotransposons at the fine scale family level reveals individual molecular patterns. BMC Genomics. doi: 10. 1186/1471-2164-13-137.
    • (2012) BMC Genomics
    • Domingues, D.S.1    Cruz, G.M.Q.2    Metcalfe, C.J.3    Nogueira, F.T.S.4    Vicentini, R.5    Alves, C.6    Sluys, M.7
  • 11
    • 77955689247 scopus 로고    scopus 로고
    • Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison
    • Du J, Tian Z, Hans CS, Laten HM, Cannon SB, Jackson SA, Shoemaker RC, Ma J (2010) Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison. Plant J 63: 584-598.
    • (2010) Plant J , vol.63 , pp. 584-598
    • Du, J.1    Tian, Z.2    Hans, C.S.3    Laten, H.M.4    Cannon, S.B.5    Jackson, S.A.6    Shoemaker, R.C.7    Ma, J.8
  • 14
    • 43049094016 scopus 로고    scopus 로고
    • The diversity of retrotransposons and the properties of their reverse transcriptases
    • Eickbush TH, Jamburuthugoda VK (2008) The diversity of retrotransposons and the properties of their reverse transcriptases. Virus Res 134: 221-234.
    • (2008) Virus Res , vol.134 , pp. 221-234
    • Eickbush, T.H.1    Jamburuthugoda, V.K.2
  • 15
    • 84875429147 scopus 로고    scopus 로고
    • Transposon integration enhances expression of stress response genes
    • doi:10.1093/nar/gks1185
    • Feng G, Leem Y, Levin HL (2012) Transposon integration enhances expression of stress response genes. Nucleic Acids Res. doi: 10. 1093/nar/gks1185.
    • (2012) Nucleic Acids Res
    • Feng, G.1    Leem, Y.2    Levin, H.L.3
  • 17
    • 0034943374 scopus 로고    scopus 로고
    • Diversity, origin, and distribution of retrotransposons (gypsy and copia) in conifers
    • Friesen N, Brandes A, Heslop-Harrison JS (2001) Diversity, origin, and distribution of retrotransposons (gypsy and copia) in conifers. Mol Biol Evol 18(7): 1176-1188.
    • (2001) Mol Biol Evol , vol.18 , Issue.7 , pp. 1176-1188
    • Friesen, N.1    Brandes, A.2    Heslop-Harrison, J.S.3
  • 19
    • 71449098242 scopus 로고    scopus 로고
    • Analysing scots pine defence-related transcripts and fungal DNA levels in seedlings single- or dual-inoculated with endophytic and pathogenic Rhizoctonia species
    • Grönberg H, Hietala AM, Haahtela K (2009) Analysing scots pine defence-related transcripts and fungal DNA levels in seedlings single- or dual-inoculated with endophytic and pathogenic Rhizoctonia species. For Pathol 39: 377-389.
    • (2009) For Pathol , vol.39 , pp. 377-389
    • Grönberg, H.1    Hietala, A.M.2    Haahtela, K.3
  • 20
    • 41149113024 scopus 로고    scopus 로고
    • Chloroplast DNA insertions into the nuclear genome of rice: the genes, sites and ages of insertion involved
    • doi:10.1007/s10142-007-0067-2
    • Guo X, Ruan S, Hu W, Cai D, Fan L (2008) Chloroplast DNA insertions into the nuclear genome of rice: the genes, sites and ages of insertion involved. Funct Integr Genomics. doi: 10. 1007/s10142-007-0067-2.
    • (2008) Funct Integr Genomics
    • Guo, X.1    Ruan, S.2    Hu, W.3    Cai, D.4    Fan, L.5
  • 21
    • 0038376894 scopus 로고    scopus 로고
    • Temperature shift coordinately changes the activity and the methylation state of transposon Tam3 in Antirrhinum majus
    • Hashida S, Kitamura K, Mikami T, Kishima Y (2003) Temperature shift coordinately changes the activity and the methylation state of transposon Tam3 in Antirrhinum majus. Plant Physiol 132(3): 1207-1216.
    • (2003) Plant Physiol , vol.132 , Issue.3 , pp. 1207-1216
    • Hashida, S.1    Kitamura, K.2    Mikami, T.3    Kishima, Y.4
  • 22
    • 4043067769 scopus 로고    scopus 로고
    • The diversity of LTR retrotransposons
    • doi:10.1186/gb-2004-5-6-225
    • Havecker ER, Gao X, Voytas DF (2004) The diversity of LTR retrotransposons. Genome Biol. doi: 10. 1186/gb-2004-5-6-225.
    • (2004) Genome Biol
    • Havecker, E.R.1    Gao, X.2    Voytas, D.F.3
  • 23
    • 77955841544 scopus 로고    scopus 로고
    • FaRE1: a transcriptionally active Ty1-copia retrotransposon in strawberry
    • He P, Ma Y, Zhao G, Dai H, Li H, Chang L, Zhang Z (2010) FaRE1: a transcriptionally active Ty1-copia retrotransposon in strawberry. J Plant Res 123(5): 707-714.
    • (2010) J Plant Res , vol.123 , Issue.5 , pp. 707-714
    • He, P.1    Ma, Y.2    Zhao, G.3    Dai, H.4    Li, H.5    Chang, L.6    Zhang, Z.7
  • 24
    • 0027168422 scopus 로고
    • Activation of tobacco retrotransposons during tissue culture
    • Hirochika H (1993) Activation of tobacco retrotransposons during tissue culture. EMBO J 12(6): 2521-2528.
    • (1993) EMBO J , vol.12 , Issue.6 , pp. 2521-2528
    • Hirochika, H.1
  • 25
    • 79953746026 scopus 로고    scopus 로고
    • An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress
    • Ito H, Gaubert H, Bucher E, Mirouze M, Vaillant I, Paszkowski J (2011) An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress. Nature 472: 115-118.
    • (2011) Nature , vol.472 , pp. 115-118
    • Ito, H.1    Gaubert, H.2    Bucher, E.3    Mirouze, M.4    Vaillant, I.5    Paszkowski, J.6
  • 26
    • 52349111241 scopus 로고    scopus 로고
    • OSHOOTER: EnSpm-type DNA transposon from rice
    • Jurka J (2005) OSHOOTER: EnSpm-type DNA transposon from rice. Repbase Reports 5(8): 205.
    • (2005) Repbase Reports , vol.5 , Issue.8 , pp. 205
    • Jurka, J.1
  • 27
    • 0034612315 scopus 로고    scopus 로고
    • Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence
    • Kalendar R, Tanskanen J, Immonen S, Nevo E, Schulman AH (2000) Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence. Proc Natl Acad Sci U S A 97(12): 6603-6607.
    • (2000) Proc Natl Acad Sci U S A , vol.97 , Issue.12 , pp. 6603-6607
    • Kalendar, R.1    Tanskanen, J.2    Immonen, S.3    Nevo, E.4    Schulman, A.H.5
  • 29
    • 78649631944 scopus 로고    scopus 로고
    • iPBS: a universal method for DNA fingerprinting and retrotransposon isolation
    • doi:10.1007/s00122-010-1398-2
    • Kalendar R, Antonius K, Smykal P, Schulman AH (2010) iPBS: a universal method for DNA fingerprinting and retrotransposon isolation. Theor Appl Genet. doi: 10. 1007/s00122-010-1398-2.
    • (2010) Theor Appl Genet
    • Kalendar, R.1    Antonius, K.2    Smykal, P.3    Schulman, A.H.4
  • 30
    • 0029920981 scopus 로고    scopus 로고
    • The genomic and physical organization of Ty1-copia-like sequences as a component of large genomes in Pinus elliottii var. elliottii and other gymnosperms
    • Kamm A, Doudric RL, Heslop-Harrison JS, Schmidt T (1996) The genomic and physical organization of Ty1-copia-like sequences as a component of large genomes in Pinus elliottii var. elliottii and other gymnosperms. Proc Natl Acad Sci U S A 93: 2708-2713.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 2708-2713
    • Kamm, A.1    Doudric, R.L.2    Heslop-Harrison, J.S.3    Schmidt, T.4
  • 31
    • 1542513556 scopus 로고    scopus 로고
    • Mobile elements: drivers of genome evolution
    • Kazazian HH (2004) Mobile elements: drivers of genome evolution. Science 303: 1626-1632.
    • (2004) Science , vol.303 , pp. 1626-1632
    • Kazazian, H.H.1
  • 34
    • 2342648914 scopus 로고    scopus 로고
    • Retrotransposon-induced mutations in grape skin color
    • Kobayashi S, Goto-Yamamoto N, Hirochika H (2004) Retrotransposon-induced mutations in grape skin color. Science 304: 982.
    • (2004) Science , vol.304 , pp. 982
    • Kobayashi, S.1    Goto-Yamamoto, N.2    Hirochika, H.3
  • 35
    • 33750831582 scopus 로고    scopus 로고
    • Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor
    • doi:10.1186/1471-2105-7-474
    • Kohany O, Gentles AJ, Hankus L, Jurka J (2006) Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor. BMC Bioinforma. doi: 10. 1186/1471-2105-7-474.
    • (2006) BMC Bioinforma
    • Kohany, O.1    Gentles, A.J.2    Hankus, L.3    Jurka, J.4
  • 36
    • 0043030233 scopus 로고    scopus 로고
    • Two-step regulation and continuous retrotransposition of the rice LINE-type retrotransposon Karma
    • Komatsu M, Shimamoto K, Kyozuka J (2003) Two-step regulation and continuous retrotransposition of the rice LINE-type retrotransposon Karma. Plant Cell 15: 1934-1944.
    • (2003) Plant Cell , vol.15 , pp. 1934-1944
    • Komatsu, M.1    Shimamoto, K.2    Kyozuka, J.3
  • 43
    • 0000931897 scopus 로고
    • Salicylic acid and plant disease resistance
    • Malamy J, Klessig DF (1992) Salicylic acid and plant disease resistance. Plant J 2(5): 643-654.
    • (1992) Plant J , vol.2 , Issue.5 , pp. 643-654
    • Malamy, J.1    Klessig, D.F.2
  • 44
    • 0025696287 scopus 로고
    • Salicylic acid: a likely endogenous signal in the resistance response of tobacco to viral infection
    • Malamy J, Carr JP, Klessig DF, Raskin I (1990) Salicylic acid: a likely endogenous signal in the resistance response of tobacco to viral infection. Science 250: 1002-1004.
    • (1990) Science , vol.250 , pp. 1002-1004
    • Malamy, J.1    Carr, J.P.2    Klessig, D.F.3    Raskin, I.4
  • 46
    • 0000620863 scopus 로고
    • Mutations in maize and chromosomal aberrations in Neurospora
    • McClintock B (1954) Mutations in maize and chromosomal aberrations in Neurospora. Carnegie Inst Wash 53: 254-261.
    • (1954) Carnegie Inst Wash , vol.53 , pp. 254-261
    • McClintock, B.1
  • 47
    • 0021715393 scopus 로고
    • The significance of responses of the genome to challenge
    • McClintock B (1984) The significance of responses of the genome to challenge. Science 226: 792-801.
    • (1984) Science , vol.226 , pp. 792-801
    • McClintock, B.1
  • 48
    • 0034755086 scopus 로고    scopus 로고
    • The mobility of the tobacco Tnt1 retrotransposon correlates with its transcriptional activation by fungal factors
    • Melayah D, Bonnivard E, Chalhoub B, Audeon C, Grandbastien M (2001) The mobility of the tobacco Tnt1 retrotransposon correlates with its transcriptional activation by fungal factors. Plant J 28(2): 159-168.
    • (2001) Plant J , vol.28 , Issue.2 , pp. 159-168
    • Melayah, D.1    Bonnivard, E.2    Chalhoub, B.3    Audeon, C.4    Grandbastien, M.5
  • 50
    • 70449711375 scopus 로고    scopus 로고
    • Retrotransposons and non-protein coding RNAs
    • Mourier T, Willerslev E (2009) Retrotransposons and non-protein coding RNAs. Brief Funct Genom Proteomic 8(6): 493-501.
    • (2009) Brief Funct Genom Proteomic , vol.8 , Issue.6 , pp. 493-501
    • Mourier, T.1    Willerslev, E.2
  • 51
    • 0032412237 scopus 로고    scopus 로고
    • Nuclear DNA amounts in gymnosperms
    • Murray BG (1998) Nuclear DNA amounts in gymnosperms. Ann Bot 82: 3-15.
    • (1998) Ann Bot , vol.82 , pp. 3-15
    • Murray, B.G.1
  • 52
    • 21644456403 scopus 로고    scopus 로고
    • When does intraspecific C-value variation become taxonomically significant?
    • Murray BG (2005) When does intraspecific C-value variation become taxonomically significant? Ann Bot 95: 119-125.
    • (2005) Ann Bot , vol.95 , pp. 119-125
    • Murray, B.G.1
  • 53
    • 0346669745 scopus 로고    scopus 로고
    • Highly abundant pea LTR Retrotransposon Ogre is constitutively transcribed and partially spliced
    • Neumann P, Pozárková D, Macas J (2003) Highly abundant pea LTR Retrotransposon Ogre is constitutively transcribed and partially spliced. Plant Mol Biol 53(3): 399-410.
    • (2003) Plant Mol Biol , vol.53 , Issue.3 , pp. 399-410
    • Neumann, P.1    Pozárková, D.2    Macas, J.3
  • 54
    • 34250761515 scopus 로고    scopus 로고
    • The centromeric retrotransposons of rice are transcribed and differentially processed by RNA interference
    • Neumann P, Yan H, Jiang J (2007) The centromeric retrotransposons of rice are transcribed and differentially processed by RNA interference. Genetics 176: 749-761.
    • (2007) Genetics , vol.176 , pp. 749-761
    • Neumann, P.1    Yan, H.2    Jiang, J.3
  • 56
    • 0001280211 scopus 로고
    • A mutable pale green locus in maize
    • Peterson PA (1953) A mutable pale green locus in maize. Genetics 38: 682-683.
    • (1953) Genetics , vol.38 , pp. 682-683
    • Peterson, P.A.1
  • 57
    • 34250729886 scopus 로고    scopus 로고
    • Origin and evolution of human microRNAs from transposable elements
    • Piriyapongsa J, Marino-Rami{dotless}rez L, Jordan IK (2007) Origin and evolution of human microRNAs from transposable elements. Genetics 176: 1323-1337.
    • (2007) Genetics , vol.176 , pp. 1323-1337
    • Piriyapongsa, J.1    Marino-Ramirez, L.2    Jordan, I.K.3
  • 59
    • 84867050577 scopus 로고    scopus 로고
    • Transposable elements: an abundant and natural source of regulatory sequences for host genes
    • Rebollo R, Romanish MT, Mager DL (2012) Transposable elements: an abundant and natural source of regulatory sequences for host genes. Annu Rev Genet 46: 21-42.
    • (2012) Annu Rev Genet , vol.46 , pp. 21-42
    • Rebollo, R.1    Romanish, M.T.2    Mager, D.L.3
  • 60
    • 84864822435 scopus 로고    scopus 로고
    • Corky, a gypsy-like retrotransposon is differentially transcribed in Quercus suber tissues
    • doi:10.1186/1756-0500-5-432
    • Rocheta M, Carvalho L, Viegas W, Morais-Cecílio L (2012) Corky, a gypsy-like retrotransposon is differentially transcribed in Quercus suber tissues. BMC Res Notes. doi: 10. 1186/1756-0500-5-432.
    • (2012) BMC Res Notes
    • Rocheta, M.1    Carvalho, L.2    Viegas, W.3    Morais-Cecílio, L.4
  • 61
    • 44949231424 scopus 로고    scopus 로고
    • Analyzing real-time PCR data by the comparative C (T) method
    • Schmittgen TD, Livak KJ (2008) Analyzing real-time PCR data by the comparative C (T) method. Nat Protoc 3: 1101-1108.
    • (2008) Nat Protoc , vol.3 , pp. 1101-1108
    • Schmittgen, T.D.1    Livak, K.J.2
  • 62
    • 33947303168 scopus 로고    scopus 로고
    • Transposable elements and the epigenetic regulation of the genome
    • Slotkin RK, Martienssen R (2007) Transposable elements and the epigenetic regulation of the genome. Nat Rev Genet 8: 272-285.
    • (2007) Nat Rev Genet , vol.8 , pp. 272-285
    • Slotkin, R.K.1    Martienssen, R.2
  • 63
    • 0035143491 scopus 로고    scopus 로고
    • The evolution of Ty1-copia group retrotransposons in gymnosperms
    • Stuart-Rogers C, Flavell AJ (2001) The evolution of Ty1-copia group retrotransposons in gymnosperms. Mol Biol Evol 18(2): 155-163.
    • (2001) Mol Biol Evol , vol.18 , Issue.2 , pp. 155-163
    • Stuart-Rogers, C.1    Flavell, A.J.2
  • 64
    • 0035942234 scopus 로고    scopus 로고
    • Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: implication of potential sequencing errors caused by large-unit repeats
    • Stupar RM, Lilly JW, Town CD, Cheng Z, Kaul S, Buell CR, Jiang J (2001) Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: implication of potential sequencing errors caused by large-unit repeats. Proc Natl Acad Sci U S A 98: 5099-5103.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 5099-5103
    • Stupar, R.M.1    Lilly, J.W.2    Town, C.D.3    Cheng, Z.4    Kaul, S.5    Buell, C.R.6    Jiang, J.7
  • 65
    • 0030152180 scopus 로고    scopus 로고
    • The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays
    • Suoniemi A, Narvanto A, Schulman AH (1996) The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays. Plant Mol Biol 31: 295-306.
    • (1996) Plant Mol Biol , vol.31 , pp. 295-306
    • Suoniemi, A.1    Narvanto, A.2    Schulman, A.H.3
  • 66
    • 0033136093 scopus 로고    scopus 로고
    • A 13-bp cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors
    • Takeda S, Sugimoto K, Otsuki H, Hirochika H (1999) A 13-bp cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors. Plant J 18(4): 383-393.
    • (1999) Plant J , vol.18 , Issue.4 , pp. 383-393
    • Takeda, S.1    Sugimoto, K.2    Otsuki, H.3    Hirochika, H.4
  • 68
    • 44349158836 scopus 로고    scopus 로고
    • Translocation of a 190-kb mitochondrial fragment into rice chromosome 12 followed by the integration of four retrotransposons
    • Ueda M, Tsutsumi N, Kadowaki K (2005) Translocation of a 190-kb mitochondrial fragment into rice chromosome 12 followed by the integration of four retrotransposons. Int J Biol Sci 1(3): 110-113.
    • (2005) Int J Biol Sci , vol.1 , Issue.3 , pp. 110-113
    • Ueda, M.1    Tsutsumi, N.2    Kadowaki, K.3
  • 69
    • 0031824280 scopus 로고    scopus 로고
    • The evolutionary analysis of the Tnt1 Retrotransposon in Nicotiana species reveals the high variability of its regulatory sequences
    • Vernhettes S, Grandbastien M-A, Casacuberta JM (1998) The evolutionary analysis of the Tnt1 Retrotransposon in Nicotiana species reveals the high variability of its regulatory sequences. Mol Biol Evol 15: 827-836.
    • (1998) Mol Biol Evol , vol.15 , pp. 827-836
    • Vernhettes, S.1    Grandbastien, M.-A.2    Casacuberta, J.M.3
  • 70
    • 77958149797 scopus 로고    scopus 로고
    • Transcriptional activity of transposable elements in maize
    • doi:10.1186/1471-2164-11-601
    • Vicient CM (2010) Transcriptional activity of transposable elements in maize. BMC Genomics. doi: 10. 1186/1471-2164-11-601.
    • (2010) BMC Genomics
    • Vicient, C.M.1
  • 72
    • 0037072661 scopus 로고    scopus 로고
    • Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi
    • Volpe TA, Kidner C, Hall IM, Teng G, Grewal SIS, Martienssen RA (2002) Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science 297: 1833-1837.
    • (2002) Science , vol.297 , pp. 1833-1837
    • Volpe, T.A.1    Kidner, C.2    Hall, I.M.3    Teng, G.4    Grewal, S.I.S.5    Martienssen, R.A.6
  • 73
    • 84904580405 scopus 로고    scopus 로고
    • Expression of retrotransposon-like sequences in Scots pine (Pinus sylvestris L) in response to heat stress
    • Voronova A, Jansons A, Ruņģis D (2011) Expression of retrotransposon-like sequences in Scots pine (Pinus sylvestris L) in response to heat stress. Environ Exp Biol 9: 121-127.
    • (2011) Environ Exp Biol , vol.9 , pp. 121-127
    • Voronova, A.1    Jansons, A.2    Ruņģis, D.3
  • 75
    • 75149187557 scopus 로고    scopus 로고
    • Copia and Gypsy retrotransposons activity in sunflower (Helianthus annuus L.)
    • doi:10.1186/1471-2229-9-150
    • Vukich M, Giordani T, Natali L, Cavallini A (2009) Copia and Gypsy retrotransposons activity in sunflower (Helianthus annuus L.). BMC Plant Biol. doi: 10. 1186/1471-2229-9-150.
    • (2009) BMC Plant Biol
    • Vukich, M.1    Giordani, T.2    Natali, L.3    Cavallini, A.4
  • 76
    • 0030207150 scopus 로고    scopus 로고
    • Plant retrotransposons: turned on by stress
    • Wessler SR (1996) Plant retrotransposons: turned on by stress. Curr Biol 6(8): 959-961.
    • (1996) Curr Biol , vol.6 , Issue.8 , pp. 959-961
    • Wessler, S.R.1
  • 77
    • 34347381116 scopus 로고    scopus 로고
    • Genome-wide comparative analysis of copia retrotransposons in Triticeae, rice, and Arabidopsis reveals conserved ancient evolutionary lineages and distinct dynamics of individual copia families
    • Wicker T, Keller B (2007) Genome-wide comparative analysis of copia retrotransposons in Triticeae, rice, and Arabidopsis reveals conserved ancient evolutionary lineages and distinct dynamics of individual copia families. Genome Res 17(7): 1072-1081.
    • (2007) Genome Res , vol.17 , Issue.7 , pp. 1072-1081
    • Wicker, T.1    Keller, B.2
  • 78
    • 0038363536 scopus 로고    scopus 로고
    • CACTA transposons in Triticeae. A diverse family of high-copy repetitive elements
    • Wicker T, Guyot R, Yahiaoui N, Keller B (2003) CACTA transposons in Triticeae. A diverse family of high-copy repetitive elements. Plant Physiol 132: 52-63.
    • (2003) Plant Physiol , vol.132 , pp. 52-63
    • Wicker, T.1    Guyot, R.2    Yahiaoui, N.3    Keller, B.4
  • 80
    • 0036181615 scopus 로고    scopus 로고
    • ABA-based chemical signaling: the co-ordination of responses to stress in plants
    • Wilkinson S, Davies W (2002) ABA-based chemical signaling: the co-ordination of responses to stress in plants. Plant Cell Environ 25: 195-210.
    • (2002) Plant Cell Environ , vol.25 , pp. 195-210
    • Wilkinson, S.1    Davies, W.2
  • 81
    • 0035923510 scopus 로고    scopus 로고
    • Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes
    • Witte C, Le QH, Bureau T, Kumar A (2001) Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes. Proc Natl Acad Sci U S A 98(24): 13778-13783.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , Issue.24 , pp. 13778-13783
    • Witte, C.1    Le, Q.H.2    Bureau, T.3    Kumar, A.4
  • 82
    • 0025006614 scopus 로고
    • Origin and evolution of retroelements based upon their reverse transcriptase sequences
    • Xiong Y, Eickbush TH (1990) Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J 9: 3353-3362.
    • (1990) EMBO J , vol.9 , pp. 3353-3362
    • Xiong, Y.1    Eickbush, T.H.2
  • 83
    • 84904544825 scopus 로고    scopus 로고
    • In-silico identification of LTR type retrotransposons and their transcriptional activities in Solanum Tuberosum
    • Yadav CB, Singh HN (2013) In-silico identification of LTR type retrotransposons and their transcriptional activities in Solanum Tuberosum. IJSCE 3(1): 160-164.
    • (2013) Ijsce , vol.3 , Issue.1 , pp. 160-164
    • Yadav, C.B.1    Singh, H.N.2
  • 84
    • 84862245279 scopus 로고    scopus 로고
    • Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction
    • doi:10.1186/1471-2105-13-134
    • Ye J, Coulouris G, Zaretskaya I, Cutcutache I, Rozen S, Madden T (2012) Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction. BMC Bioinforma. doi: 10. 1186/1471-2105-13-134.
    • (2012) BMC Bioinforma
    • Ye, J.1    Coulouris, G.2    Zaretskaya, I.3    Cutcutache, I.4    Rozen, S.5    Madden, T.6
  • 85
    • 84555170299 scopus 로고    scopus 로고
    • Genome-wide expression of non-coding RNA and global chromatin modification
    • Zhang R, Zhang L, Yu W (2012) Genome-wide expression of non-coding RNA and global chromatin modification. Acta Biochim Biophys Sin 44(1): 40-47.
    • (2012) Acta Biochim Biophys Sin , vol.44 , Issue.1 , pp. 40-47
    • Zhang, R.1    Zhang, L.2    Yu, W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.