Involvement of ethylene in stress-induced expression of the TLC1.1 retrotransposon from Lycopersicon chilense Dun.

Plant Physiology

Volumn 138, Issue 4, 2005, Pages 2075-2086

  Tapia, Gerardo ^a   Verdugo, Isabel ^a   Yañez, Mónica ^a   Ahumada, Iván ^a   Theoduloz, Cristina ^a   Cordero, Cecilia ^a   Poblete, Fernando ^a   González, Enrique ^a   Ruiz Lara, Simón ^a  

^a UNIVERSIDAD DE TALCA   (Chile)

Author keywords

[No Author keywords available]

Indexed keywords

ETHYLENE; GENES; MOLECULES; ORGANIC ACIDS;

GENE EXPRESSION; LONG TERMINAL REPEAT (LTR); STRESS-INDUCED TRANSCRIPTIONAL ACTIVATION;

PLANTS (BOTANY);

GENES; ORGANIC ACIDS; PLANTS;

LYCOPERSICON CHILENSE; NICOTIANA TABACUM;

ETHYLENE; ETHYLENE DERIVATIVE; SODIUM CHLORIDE;

ANGIOSPERM; ARTICLE; DEHYDRATION; DRUG EFFECT; GENE EXPRESSION REGULATION; LONG TERMINAL REPEAT; METABOLISM; MOLECULAR GENETICS; PHYSIOLOGY; PLANT LEAF; PROMOTER REGION; RETROPOSON; SIGNAL TRANSDUCTION; TRANSGENIC PLANT;

DEHYDRATION; ETHYLENES; GENE EXPRESSION REGULATION, PLANT; MOLECULAR SEQUENCE DATA; PLANT LEAVES; PLANTS, GENETICALLY MODIFIED; PROMOTER REGIONS (GENETICS); RETROELEMENTS; SIGNAL TRANSDUCTION; SODIUM CHLORIDE; SOLANACEAE; TERMINAL REPEAT SEQUENCES;

EID: 33644665000     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.105.059766     Document Type: Article

References (74)

1. Araujo PJ, Casacuberta JM, Costa AP, Hashimoto RY, Grandbastien MA, Van Sluys MA (2001) Retrolyc1 subfamilies by different U3 LTR regulatory regions in the Lycopersicon genus. Mol Gen Genet 266: 35-41
2. Beguiristain T, Grandbastien MA, Puigdomenech P, Casacuberta JM (2001) Three Tnt1 subfamilies show different stress-associated patterns of expression in tobacco: consequences for retrotransposon control and evolution in plants. Plant Physiol 127: 212-221
3. Bleecker AB, Kende H (2000) Ethylene: a gaseous signal molecule in plant. Annu Rev Cell Dev Biol 16: 1-18
4. Boeke JD, Corces VG (1989) Transcription and reverse transcription of retrotransposon. Annu Rev Microbiol 43: 403-434
5. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254
6. Budiman MA, Mao L, Wood TC, Wing RA (2000) A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing. Genome Res 10: 129-136
7. Casacuberta JM, Grandbastien MA (1993) Characterization of LTR sequences involved in the protoplast specific expression of the tobacco Tnt1 retrotransposon. Nucleic Acids Res 21: 2037-2093
8. Casacuberta JM, Santiago N (2003) Plant LTR-retrotransposons and MTTEs: control of transposition and impact on the evolution of plant genes and genomes. Gene 311: 1-11
9. Chen RD, Yu LX, Greer AF, Cheriti H, Tabaeizadeh Z (1994) Isolation of an osmotic stress- and abscisic acid-induced gene encoding an acidic endochitinase from Lycopersicon chilense. Mol Gen Genet 245: 195-202
10. Chupeau Y, Bourgin JP, Missonier C, Dorion N, Morel G (1974) Preparation et culture de protoplastes de divers Nicotiana. CR Acad Sci Paris 278: 1565-1568
11. Costa AP, Scortecci RC, Hashimoto RY, Araujo PG, Grandbastien MA, Van Sluys MA (1999) Retrolycl-1, a member of the Tnt1 retrotransposon super-family in the Lycopersicon peruvianum genome. Genetica 107: 65-72
12. Devos RM, Brown JKM, Bennetzen JL (2002) Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis. Genome Res 12: 1075-1079
13. Díaz J, ten Have A, van Kan JAL (2002) The role of ethylene and wound signaling in resistance of tomato to Botrytis cinerea. Plant Physiol 129: 1341-1351
14. Dombrowski JM (2003) Salt stress activation of wound-related genes in tomato plants. Plant Physiol 132: 2098-2107
15. Dong X (1998) SA, JA, ethylene, and disease resistance in plants. Curr Opin Plant Biol 1: 316-323
16. Flavell AJ, Dunbar E, Anderson R, Pearce SR, Hartley R, Kumar A (1992) Ty1-copia group retrotransposons are ubiquitous and heterogeneous in higher plants. Nucleic Acids Res 20: 36-39
17. Grandbastien MA. (1992) Retroelement in higher plants. Trends Genet 8: 103-108
18. Grandbastien MA. (1998) Activation of plant retrotransposon under stress conditions. Trends Plant Sci 3: 181-187
19. Grandbastien MA., Audeon C, Casacuberta JM, Grappin P, Lucas H, Moreau C, Pouteau S (1994) Functional analysis of the tobacco Tnt1 retrotransposon. Genetica 93: 181-189
20. Grandbastien MA, Lucas H, Morel JB, Mhiri C, Vernhettes S, Cassacuberta JM (1997) The expression of the tobacco Tnt1 is linked to the plant defense responses. Genetica 100: 241-252
21. Grandbastien MA, Spielmann A, Caboche M (1989) Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics. Nature 337: 376-380
22. Guo H, Ecker J (2004) The ethylene signaling pathway: new insights. Curr Opin Plant Biol 7: 40-49
23. Guo A, Salih G, Klessing DF (2000) Activation of a diverse set of genes during the tobacco resistance response to TMV is independent of salicylic acid: Induction of a subset is also ethylene independent. Plant J 21: 409-418
24. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41: 95-93
25. Hirochika H (1993) Activation of tobacco retrotransposons during tissue culture. EMBO J 12: 2521-2528
26. Hirochika H, Okamata H, Kakutani T (2000) Silencing of retrotransposons in Arabidopsis and reactivation by the ddm1 mutation. Plant Cell 12: 357-368
27. Hirochika H, Sugimoto K, Otsuki Y, Tsugawa H, Kanda M (1996) Retrotransposons of rice involved in mutations induced by tissue culture. Proc Natl Acad Sci USA 93: 7783-7788
28. Horsch RB, Fraley RT, Rogers SG, Sanders PR, Lloyd A, Hoffmann N (1984) Inheritance of functional foreign gene in plants. Science 223: 496-498
29. Hu W, Prem Das O, Messing J (1995) Zeon-1, a member of a new maize retrotransposon family. Mol Gen Genet 248: 471-430
30. Itzhaki H, Maxzon JM, Woodson W (1994) An ethylene-responsive enhancer element is involved in the senescence-related expression of carnation glutathione-S-transferase (GST1) gene. Proc Natl Acad Sci USA 91: 8925-8929
31. Jefferson RA, Kavanagh TA, Bevan MW (1987) GUS fusions: β-glucuronidase as sensitive and versatile gene fusion marker in higher plants. EMBO J 6: 3901-3907
32. Johns MA, Mottinger J, Freeling M (1985) A low copy number, copia-like transposon in maize. EMBO J 4: 1093-1102
33. Johnson PR, Ecker JR (1998) The ethylene gas signal transduction pathway: a molecular perspective. Annu Rev Genet 32: 227-254
34. Kalendar R, Tanskanen J, Immonen S, Nevo E, Schulman AH (2000) Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence. Proc Natl Acad Sci USA 97: 6603-6607
35. Kumar A, Bennetzen JL (1999) Plant retrotransposon. Annu Rev Genet 33: 479-532
36. Maimann S, Wagner C, Kreft O, Zeh M, Willmitzer L, Hofgen R, Hesse H (2000) Transgenic potato plants reveal the indispensable role of cystathionine beta-lyase in plant growth and development. Plant J 23: 747-758
37. Marillonnet S, Wessler SR (1998) Extreme structural heterogeneity among the members of a maize retrotransposon family. Genetics 150: 1245-1256
38. McClintock B (1984) The significance of responses of the genome to challenge. Science 226: 792-801
39. Mhiri C, Morel J, Vernhettes S, Casacuberta JM, Lucas H, Grandbastien MA (1997) The promoter of the tobacco Tnt1 retrotransposon is induced by wounding and by abiotic stress. Plant Mol Biol 33: 257-266
40. Montgomery J, Goldman S, Deikman J, Margossian L, Fischer RL (1993) Identification of an ethylene-responsive region in the promoter of a fruit ripening gene. Proc Natl Acad Sci USA 90: 5939-5943
41. Moreau-Mhiri C, Morel J, Audeon C, Ferault M, Grandbastien MA, Lucas H (1996) Regulation of expression of the tobacco Tnt1 retrotransposon in heterologous species following pathogen-related stresses. Plant J 9: 409-419
42. Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol Plant 15: 473-497
43. O'Donnell PJ, Calvert C, Atzorn R, Wasternack C, Leyser HMO, Bowles DJ (1996) Ethylene as a signal mediating the wound response of tomato plants. Science 274: 1914-1917
44. O'Donnell PJ, Schmelz E, Block A, Miersch O, Wasternack C, Jones JB, Klee HJ (2003) Multiple hormones act sequentially to mediate a susceptible tomato pathogen defense response. Plant Physiol 133: 1281-1289
45. Pouteau S, Grandbastien MA, Boccara M (1994) Microbial elicitors of plant defense responses activate transcription of a retrotransposon. Plant J 5: 535-542
46. Pouteau S, Huttner E, Grandbastien MA, Caboche M (1991) Specific expression of the tobacco Tnt1 retrotransposon in protoplasts. EMBO J 10: 1911-1918
47. Prestridge DS (2000) Computer software for eukaryotic promoter analysis. Methods Mol Biol 130: 265-295
48. Rogers SA, Pauls KP (2000) Ty1-copia-like retrotransposons of tomato (Lycopersicon esculentum Mill.). Genome 43: 887-894
49. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning: A Laboratory Manual, Ed 2. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
50. SanMiguel P, Gaut BS, Tikhonov A, Nakajima Y, Bennetzen JL (1998) The palaeontology of intergene retrotransposons of maize. Nat Genet 20: 43-45
51. Seki M, Narusaka M, Ishida J, Nanjo T, Fujita M, Oono Y, Kamiya A, Nakajima M, Enju A, Sakurai T, et al (2002) Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray. Plant J 31: 279-292
52. Sentry JW, Smyth DR (1989) An element with long terminal repeats and its variants arrangements in the genome of Lilium henryi. Mol Gen Genet 215: 349-354
53. Shinozaki K, Yamaguchi-Shinozaki K (2000) Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways. Curr Opin Plant Biol 3: 217-223
54. Shinozaki K, Yamaguchi-Shinozaki K, Seki M (2003) Regulatory network of gene expression in the drought and cold stress responses. Curr Opin Plant Biol 6: 410-417
55. Smyth DR, Kalitsis R, Joseph JL, Sentry JW (1989) Plant retrotransposon from Lilium henryi is related to Ty3 of yeast and the gypsy group of Drosophila. Proc Natl Acad Sci USA 86: 5015-5019
56. Su PY, Brown TA (1997) Ty3/gypsy-like retrotransposon sequences in tomato. Plasmid 38: 143-157
57. Sugimoto K, Takeda S, Hirochika H (2000) MYB-related transcription factor NtMYB2 induced by wounding and elicitors is a regulator of the tobacco retrotransposon Tto1 and defense-related genes. Plant Cell 12: 2511-2528
58. Suoniemi A, Anamthawat-Jonsson K, Arna T, Schulman AH (1996a) Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome. Plant Mol Biol 30: 1321-1329
59. Suoniemi A, Navarro A, Schulman AH (1996b) The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays. Plant Mol Biol 31: 295-306
60. Takeda S, Sugimoto K, Otsuki H, Hirochika H (1998) Transcriptional activation of the tobacco retrotransposon Tto1 by wounding and methyl jasmonate. Plant Mol Biol 36: 365-376
61. Takeda S, Sugimoto K, Otsuki H, Hirochika H (1999) A 13-pb cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors. Plant J 18: 383-393
62. Turcich MP, Bokhari-Riza A, Hamilton DA, He C, Messier W, Stewart CB, Mascarenhas JP (1996) PREM-2, a copia-type retroelement in maize is expressed preferentially in early microspores. Sex Plant Reprod 9: 65-74
63. Vaucheret H, Marion-Poll A, Meyer C, Faure JD, Marin E, Caboche M (1992) Interest in and limits to the utilization of reporter genes for the analysis of transcriptional regulation of nitrate reductase. Mol Gen Genet 245: 259-268
64. Vernhettes S, Grandbastien MA, Casacuberta JM (1997) In vivo characterization of transcriptional regulatory sequences involved in the defense-associated expression of the tobacco retrotransposon Tnt1. Plant Mol Biol 35: 673-679
65. Vernhettes S, Grandbastien MA, Casacuberta JM (1998) The evolutionary analysis of the Tnt1 retrotransposon in Nicotiana species reveals the high variability of its regulatory sequences. Mol Biol Evol 15: 827-836
66. Voytas DF, Cummings MP, Kunieczny A, Ausubel FM, Rodermel SR (1992) Copia-like retrotransposons are ubiquitous among plants. Proc Natl Acad Sci USA 89: 7124-7128
67. Wang KL, Li H, Ecker JR (2002) Ethylene biosynthesis and signaling networks. Plant Cell (Suppl) 14: S131-S151
68. Watanabe T, Seo S, Sakai S (2001) Wound-induced expression of a gene for 1-aminoclopropane-1-carboxilate synthase ethylene production is regulated by both reactive oxygen species and jasmonic acid in Curcubita maxima. Plant Physiol Biochem 39: 121-127
69. Wei T, O'Connell MA (1996) Structure and characterization of a putative drought-inducible H1 histone gen. Plant Mol Biol 30: 255-268
70. Wessler SR. (1996) Turned on by stress: plant retrotransposons. Curr Biol 6: 959-961
71. Wright DA, Voytas DF (1998) Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelope-like proteins. Genetics 149: 703-715
72. Xiong Y, Eickbush TH (1990) Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J 9: 3353-3362
73. Yañez M, Verdugo I, Rodríguez M, Prats S, Ruiz-Lara S (1998) Highly heterogeneous families of Ty1/copia retrotransposons in the Lycopersicon chilense genome. Gene 222: 223-228
74. Zhu JK (2000) Genetic analysis of plant salt tolerance using Arabidopsis. Plant Physiol 124: 941-943