메뉴 건너뛰기




Volumn 24, Issue 6, 2014, Pages 954-962

Polymerase theta-mediated end joining of replication-associated DNA breaks in C. elegans

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE; GUANINE; MICROORGANISM PROTEIN; NUCLEOTIDE; POLYMERASE THETA; UNCLASSIFIED DRUG; CAENORHABDITIS ELEGANS PROTEIN; DNA DIRECTED DNA POLYMERASE; DNA POLYMERASE THETA;

EID: 84901823399     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.170431.113     Document Type: Article
Times cited : (136)

References (38)
  • 1
    • 11144237897 scopus 로고    scopus 로고
    • Quantitative analysis of translesion DNA synthesis across a benzo[a]pyrene-guanine adduct in mammalian cells: The role of DNA polymerase
    • DOI 10.1074/jbc.M409155200
    • Avkin S, Goldsmith M, Velasco-Miguel S, Geacintov N, Friedberg EC, Livneh Z. 2004. Quantitative analysis of translesion DNA synthesis across a benzo[a]pyrene-guanine adduct in mammalian cells: the role of DNA polymerase k. J Biol Chem 279: 53298-53305. (Pubitemid 40051834)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.51 , pp. 53298-53305
    • Avkin, S.1    Goldsmith, M.2    Velasco-Miguel, S.3    Geacintov, N.4    Friedberg, E.C.5    Livneh, Z.6
  • 2
    • 0016063911 scopus 로고
    • The genetics of Caenorhabditis elegans
    • Brenner S. 1974. The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
    • (1974) Genetics , vol.77 , pp. 71-94
    • Brenner, S.1
  • 6
    • 0030826310 scopus 로고    scopus 로고
    • Characterization of revertants of unc-93(e1500) in Caenorhabditis elegans induced by N-ethyl-N-nitrosourea
    • De Stasio E, Lephoto C, Azuma L, Holst C, Stanislaus D, Uttam J. 1997. Characterization of revertants of unc-93(e1500) in Caenorhabditis elegans induced by N-ethyl-N-nitrosourea. Genetics 147: 597-608. (Pubitemid 27418570)
    • (1997) Genetics , vol.147 , Issue.2 , pp. 597-608
    • De Stasio, E.1    Lephoto, C.2    Azuma, L.3    Holst, C.4    Stanislaus, D.5    Uttam, J.6
  • 7
    • 0037020269 scopus 로고    scopus 로고
    • Human DNA polymerase k bypasses and extends beyond thymine glycols during translesion synthesis in vitro, preferentially incorporating correct nucleotides
    • Fischhaber PL, Gerlach VL, Feaver WJ, Hatahet Z, Wallace SS, Friedberg EC. 2002. Human DNA polymerase k bypasses and extends beyond thymine glycols during translesion synthesis in vitro, preferentially incorporating correct nucleotides. J Biol Chem 277: 37604-37611.
    • (2002) J Biol Chem , vol.277 , pp. 37604-37611
    • Fischhaber, P.L.1    Gerlach, V.L.2    Feaver, W.J.3    Hatahet, Z.4    Wallace, S.S.5    Friedberg, E.C.6
  • 8
    • 0033679966 scopus 로고    scopus 로고
    • A conserved checkpoint pathway mediates DNA damage-induced apoptosis and cell cycle arrest in C. elegans
    • Gartner A, Milstein S, Ahmed S, Hodgkin J, Hengartner MO. 2000. A conserved checkpoint pathway mediates DNA damage-induced apoptosis and cell cycle arrest in C. elegans. Mol Cell 5: 435-443.
    • (2000) Mol Cell , vol.5 , pp. 435-443
    • Gartner, A.1    Milstein, S.2    Ahmed, S.3    Hodgkin, J.4    Hengartner, M.O.5
  • 9
    • 0019061841 scopus 로고    scopus 로고
    • unc-93(e1500): A behavioral mutant of Caenorhabditis elegans that defines a gene with a wild-type null phenotype
    • Greenwald IS, Horvitz HR. 2003. unc-93(e1500): a behavioral mutant of Caenorhabditis elegans that defines a gene with a wild-type null phenotype. Genetics 96: 147-164.
    • (2003) Genetics , vol.96 , pp. 147-164
    • Greenwald, I.S.1    Horvitz, H.R.2
  • 11
    • 0034425754 scopus 로고    scopus 로고
    • Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase η
    • DOI 10.1038/78169
    • Haracska L, Yu SL, Johnson RE, Prakash L, Prakash S. 2000. Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase η. Nat Genet 25: 458-461. (Pubitemid 32983443)
    • (2000) Nature Genetics , vol.25 , Issue.4 , pp. 458-461
    • Haracska, L.1    Yu, S.-L.2    Johnson, R.E.3    Prakash, L.4    Prakash, S.5
  • 12
    • 59249105978 scopus 로고    scopus 로고
    • A microhomology-mediated break-induced replication model for the origin of human copy number variation
    • Hastings PJ, Ira G, Lupski JR. 2009. A microhomology-mediated break-induced replication model for the origin of human copy number variation. PLoS Genet 5: e1000327.
    • (2009) PLoS Genet , vol.5
    • Hastings, P.J.1    Ira, G.2    Lupski, J.R.3
  • 13
    • 0020360668 scopus 로고
    • Dominant X-chromosome nondisjunction mutants of Caenorhabditis elegans
    • Herman RK, Kari CK, Hartman PS. 1982. Dominant X-chromosome nondisjunction mutants of Caenorhabditis elegans. Genetics 102: 379-400. (Pubitemid 13220035)
    • (1982) Genetics , vol.102 , Issue.3 , pp. 379-400
    • Herman, R.K.1    Kari, C.K.2    Hartman, P.S.3
  • 14
    • 34247601575 scopus 로고    scopus 로고
    • Non-homologous end-joining for repairing I-SceI-induced DNA double strand breaks in human cells
    • DOI 10.1016/j.dnarep.2007.01.004, PII S1568786407000183
    • Honma M, Sakuraba M, Koizumi T, Takashima Y, Sakamoto H, Hayashi M. 2007. Non-homologous end-joining for repairing I-SceI-induced DNA double strand breaks in human cells. DNA Repair (Amst) 6: 781-788. (Pubitemid 46670087)
    • (2007) DNA Repair , vol.6 , Issue.6 , pp. 781-788
    • Honma, M.1    Sakuraba, M.2    Koizumi, T.3    Takashima, Y.4    Sakamoto, H.5    Hayashi, M.6
  • 15
    • 0033548231 scopus 로고    scopus 로고
    • Efficient bypass of a thyminethymine dimer by yeast DNA polymerase, Polη
    • Johnson RE, Prakash S, Prakash L. 1999. Efficient bypass of a thyminethymine dimer by yeast DNA polymerase, Polη. Science 283: 1001-1004.
    • (1999) Science , vol.283 , pp. 1001-1004
    • Johnson, R.E.1    Prakash, S.2    Prakash, L.3
  • 16
    • 35148820034 scopus 로고    scopus 로고
    • A role for yeast and human translesion synthesis DNA polymerases in promoting replication through 3-methyl adenine
    • DOI 10.1128/MCB.01079-07
    • Johnson RE, Yu SL, Prakash S, Prakash L. 2007. A role for yeast and human translesion synthesis DNA polymerases in promoting replication through 3-methyl adenine. Mol Cell Biol 27: 7198-7205. (Pubitemid 47549755)
    • (2007) Molecular and Cellular Biology , vol.27 , Issue.20 , pp. 7198-7205
    • Johnson, R.E.1    Yu, S.-L.2    Prakash, S.3    Prakash, L.4
  • 18
    • 80055106773 scopus 로고    scopus 로고
    • Translesion DNA synthesis in the context of cancer research
    • Knobel PA, Marti TM. 2011. Translesion DNA synthesis in the context of cancer research. Cancer Cell Int 11: 39.
    • (2011) Cancer Cell Int , vol.11 , pp. 39
    • Knobel, P.A.1    Marti, T.M.2
  • 20
    • 0037076519 scopus 로고    scopus 로고
    • Translesion synthesis by human DNA polymerase η across thymine glycol lesions
    • DOI 10.1021/bi025549k
    • Kusumoto R, Masutani C, Iwai S, Hanaoka F. 2002. Translesion synthesis by human DNA polymerase η across thymine glycol lesions. Biochemistry 41: 6090-6099. (Pubitemid 34498915)
    • (2002) Biochemistry , vol.41 , Issue.19 , pp. 6090-6099
    • Kusumoto, R.1    Masutani, C.2    Iwai, S.3    Hanaoka, F.4
  • 21
    • 37349109667 scopus 로고    scopus 로고
    • A DNA Replication Mechanism for Generating Nonrecurrent Rearrangements Associated with Genomic Disorders
    • DOI 10.1016/j.cell.2007.11.037, PII S0092867407015413
    • Lee JA, Carvalho CMB, Lupski JR. 2007. A DNA replication mechanism for generating nonrecurrent rearrangements associated with genomic disorders. Cell 131: 1235-1247. (Pubitemid 350297419)
    • (2007) Cell , vol.131 , Issue.7 , pp. 1235-1247
    • Lee, J.A.1    Carvalho, C.M.B.2    Lupski, J.R.3
  • 22
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 24
    • 58149333880 scopus 로고    scopus 로고
    • The cellular, developmental and population-genetic determinants of mutation-rate evolution
    • Lynch M. 2008. The cellular, developmental and population-genetic determinants of mutation-rate evolution. Genetics 180: 933-943.
    • (2008) Genetics , vol.180 , pp. 933-943
    • Lynch, M.1
  • 25
    • 0033564917 scopus 로고    scopus 로고
    • Xeroderma pigmentosum variant (XP-V) correcting protein from HeLa cells has a thymine dimer bypass DNA polymerase activity
    • DOI 10.1093/emboj/18.12.3491
    • Masutani C, Araki M, Yamada A, Kusumoto R, Nogimori T, Maekawa T, Iwai S, Hanaoka F. 1999a. Xeroderma pigmentosum variant (XP-V) correcting protein from HeLa cells has a thymine dimer bypass DNA polymerase activity. EMBO J 18: 3491-3501. (Pubitemid 29276594)
    • (1999) EMBO Journal , vol.18 , Issue.12 , pp. 3491-3501
    • Masutani, C.1    Araki, M.2    Yamada, A.3    Kusumoto, R.4    Nogimori, T.5    Maekawa, T.6    Iwai, S.7    Hanaoka, F.8
  • 27
    • 0034720285 scopus 로고    scopus 로고
    • Low fidelity DNA synthesis by human DNA polymerase-η
    • DOI 10.1038/35010014
    • Matsuda T, Bebenek K, Masutani C, Hanaoka F, Kunkel TA. 2000. Low fidelity DNA synthesis by human DNA polymerase-η. Nature 404: 1011-1013. (Pubitemid 30243597)
    • (2000) Nature , vol.404 , Issue.6781 , pp. 1011-1013
    • Matsuda, T.1    Bebenek, K.2    Masultanl, C.3    Hanaoka, F.4    Kunkel, T.A.5
  • 28
    • 70450222723 scopus 로고    scopus 로고
    • The MRT-1 nuclease is required for DNA crosslink repair and telomerase activity in vivo in Caenorhabditis elegans
    • Meier B, Barber LJ, Liu Y, Shtessel L, Boulton SJ, Gartner A, Ahmed S. 2009. The MRT-1 nuclease is required for DNA crosslink repair and telomerase activity in vivo in Caenorhabditis elegans. EMBO J 28: 3549-3563.
    • (2009) EMBO J , vol.28 , pp. 3549-3563
    • Meier, B.1    Barber, L.J.2    Liu, Y.3    Shtessel, L.4    Boulton, S.J.5    Gartner, A.6    Ahmed, S.7
  • 29
    • 33947581390 scopus 로고    scopus 로고
    • The impact of translocations and gene fusions on cancer causation
    • DOI 10.1038/nrc2091, PII NRC2091
    • Mitelman F, Johansson B, Mertens F. 2007. The impact of translocations and gene fusions on cancer causation. Nat Rev Cancer 7: 233-245. (Pubitemid 46480968)
    • (2007) Nature Reviews Cancer , vol.7 , Issue.4 , pp. 233-245
    • Mitelman, F.1    Johansson, B.2    Mertens, F.3
  • 30
    • 43849091136 scopus 로고    scopus 로고
    • Caenorhabditis elegans POLQ-1 and HEL-308 function in two distinct DNA interstrand cross-link repair pathways
    • Muzzini DM, Plevani P, Boulton SJ, Cassata G, Marini F. 2008. Caenorhabditis elegans POLQ-1 and HEL-308 function in two distinct DNA interstrand cross-link repair pathways. DNA Repair (Amst) 7: 941-950.
    • (2008) DNA Repair (Amst) , vol.7 , pp. 941-950
    • Muzzini, D.M.1    Plevani, P.2    Boulton, S.J.3    Cassata, G.4    Marini, F.5
  • 33
    • 84864057454 scopus 로고    scopus 로고
    • A broad requirement for TLS polymerases η and κ, and interacting sumoylation and nuclear pore proteins, in lesion bypass during C. elegans embryogenesis
    • Roerink SF, Koole W, Stapel LC, Romeijn RJ, Tijsterman M. 2012. A broad requirement for TLS polymerases η and κ, and interacting sumoylation and nuclear pore proteins, in lesion bypass during C. elegans embryogenesis. PLoS Genet 8: e1002800.
    • (2012) PLoS Genet , vol.8
    • Roerink, S.F.1    Koole, W.2    Stapel, L.C.3    Romeijn, R.J.4    Tijsterman, M.5
  • 34
    • 8644233355 scopus 로고    scopus 로고
    • The mouse genomic instability mutation chaos1 is an allele of Polq that exhibits genetic interaction with Atm
    • DOI 10.1128/MCB.24.23.10381-10389.2004
    • Shima N, Munroe RJ, Schimenti JC. 2004. The mouse genomic instability mutation chaos1 is an allele of Polq that exhibits genetic interaction with Atm. Mol Cell Biol 24: 10381-10389. (Pubitemid 39507874)
    • (2004) Molecular and Cellular Biology , vol.24 , Issue.23 , pp. 10381-10389
    • Shima, N.1    Munroe, R.J.2    Schimenti, J.C.3
  • 35
    • 0035989395 scopus 로고    scopus 로고
    • Frequent germline mutations and somatic repeat instability in DNA mismatch-repair-deficient Caenorhabditis elegans
    • Tijsterman M, Pothof J, Plasterk RHA. 2002. Frequent germline mutations and somatic repeat instability in DNA mismatch-repair-deficient Caenorhabditis elegans. Genetics 161: 651-660. (Pubitemid 34705406)
    • (2002) Genetics , vol.161 , Issue.2 , pp. 651-660
    • Tijsterman, M.1    Pothof, J.2    Plasterk, R.H.A.3
  • 36
    • 70350694443 scopus 로고    scopus 로고
    • Pindel: A pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
    • Ye K, Schulz MH, Long Q, Apweiler R, Ning Z. 2009. Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads. Bioinformatics 25: 2865-2871.
    • (2009) Bioinformatics , vol.25 , pp. 2865-2871
    • Ye, K.1    Schulz, M.H.2    Long, Q.3    Apweiler, R.4    Ning, Z.5
  • 37
    • 84871715412 scopus 로고    scopus 로고
    • DNA polymerase POLQ and cellular defense against DNA damage
    • Yousefzadeh MJ, Wood RD. 2012. DNA polymerase POLQ and cellular defense against DNA damage. DNA Repair (Amst) 12: 1-9.
    • (2012) DNA Repair (Amst) , vol.12 , pp. 1-9
    • Yousefzadeh, M.J.1    Wood, R.D.2
  • 38
    • 0035158355 scopus 로고    scopus 로고
    • Highly frequent frameshift DNA synthesis by human DNA polymerase μ
    • DOI 10.1128/MCB.21.23.7995-8006.2001
    • Zhang Y, Wu X, Yuan F, Xie Z, Wang Z. 2001. Highly frequent frameshift DNA synthesis by human DNA polymerase μ. Mol Cell Biol 21: 7995-8006. (Pubitemid 33051791)
    • (2001) Molecular and Cellular Biology , vol.21 , Issue.23 , pp. 7995-8006
    • Zhang, Y.1    Wu, X.2    Yuan, F.3    Xie, Z.4    Wang, Z.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.