메뉴 건너뛰기




Volumn 78, Issue 4, 2014, Pages 674-685

Genome rearrangements derived from homoeologous recombination following allopolyploidy speciation in coffee

Author keywords

Coffea arabica; genome evolution; homoeologous recombination; next generation sequencing; polyploidy; RNA sequencing; single nucleotide polymorphisms

Indexed keywords

PLANTS (BOTANY); RNA;

EID: 84900517385     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/tpj.12505     Document Type: Article
Times cited : (38)

References (63)
  • 1
    • 84872519378 scopus 로고    scopus 로고
    • Hybridization and speciation
    • Abbott, R., Albach, D., Ansell, S., et al,. (2013) Hybridization and speciation. J. Evol. Biol. 26, 229-246.
    • (2013) J. Evol. Biol. , vol.26 , pp. 229-246
    • Abbott, R.1    Albach, D.2    Ansell, S.3
  • 2
    • 0345071423 scopus 로고    scopus 로고
    • Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing
    • Adams, K.L., Cronn, R., Percifield, R., and, Wendel, J.F., (2003) Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing. Proc. Natl Acad. Sci. USA 100, 4649-4654.
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 4649-4654
    • Adams, K.L.1    Cronn, R.2    Percifield, R.3    Wendel, J.F.4
  • 4
    • 77949539786 scopus 로고    scopus 로고
    • Adaptive radiation in Coffea subgenus Coffea L. (Rubiaceae) in Africa and Madagascar
    • Anthony, F., Diniz, L.E.C., Combes, M.-C., and, Lashermes, P., (2010) Adaptive radiation in Coffea subgenus Coffea L. (Rubiaceae) in Africa and Madagascar. Plant Syst. Evol. 285, 51-64.
    • (2010) Plant Syst. Evol. , vol.285 , pp. 51-64
    • Anthony, F.1    Diniz, L.E.C.2    Combes, M.-C.3    Lashermes, P.4
  • 5
    • 84859897319 scopus 로고    scopus 로고
    • Rarely successful polyploids and their legacy in plant genomes
    • Arrigo, N., and, Barker, M.S., (2012) Rarely successful polyploids and their legacy in plant genomes. Curr. Opin. Plant Biol. 15, 140-146.
    • (2012) Curr. Opin. Plant Biol. , vol.15 , pp. 140-146
    • Arrigo, N.1    Barker, M.S.2
  • 6
    • 79961199174 scopus 로고    scopus 로고
    • Dissecting the genome of the polyploid crop oilseed rape by transcriptome sequencing
    • Bancroft, I., Morgan, C., Fraser, F., et al,. (2011) Dissecting the genome of the polyploid crop oilseed rape by transcriptome sequencing. Nat. Biotechnol. 29, 762-766.
    • (2011) Nat. Biotechnol. , vol.29 , pp. 762-766
    • Bancroft, I.1    Morgan, C.2    Fraser, F.3
  • 7
    • 84865061314 scopus 로고    scopus 로고
    • Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: A phylogenomic perspective
    • Bombarely, A., Edwards, K.D., Sanchez-Tamburrino, J., and, Mueller, L.A., (2012) Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: a phylogenomic perspective. BMC Genomics, 13, 406.
    • (2012) BMC Genomics , vol.13 , pp. 406
    • Bombarely, A.1    Edwards, K.D.2    Sanchez-Tamburrino, J.3    Mueller, L.A.4
  • 9
    • 77950946551 scopus 로고    scopus 로고
    • Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and sequenom iPLEX massarray genotyping
    • Buggs, R.J.A., Chamala, S., Wu, W., Gao, L., May, G.D., Schnable, P.S., Soltis, D.E., Soltis, P.S., and, Barbazuk, W.B., (2010) Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and sequenom iPLEX massarray genotyping. Mol. Ecol. 19, 132-146.
    • (2010) Mol. Ecol. , vol.19 , pp. 132-146
    • Buggs, R.J.A.1    Chamala, S.2    Wu, W.3    Gao, L.4    May, G.D.5    Schnable, P.S.6    Soltis, D.E.7    Soltis, P.S.8    Barbazuk, W.B.9
  • 10
    • 79955377333 scopus 로고    scopus 로고
    • Biosystematic relationships and the formation of polyploids
    • Buggs, R.J.A., Soltis, P.S., and, Soltis, D.E., (2011) Biosystematic relationships and the formation of polyploids. Taxon, 60, 324-332.
    • (2011) Taxon , vol.60 , pp. 324-332
    • Buggs, R.J.A.1    Soltis, P.S.2    Soltis, D.E.3
  • 11
    • 84862777707 scopus 로고    scopus 로고
    • Rapid, repeated, and clustered loss of duplicate genes in allopolyploid plant populations of independent origin
    • Buggs, R.J.A., Chamala, S., Wu, W., Tate, J.A., Schnable, P.S., Soltis, D.E., Soltis, P.S., and, Barbazuk, W.B., (2012a) Rapid, repeated, and clustered loss of duplicate genes in allopolyploid plant populations of independent origin. Curr. Biol. 22, 248-252.
    • (2012) Curr. Biol. , vol.22 , pp. 248-252
    • Buggs, R.J.A.1    Chamala, S.2    Wu, W.3    Tate, J.A.4    Schnable, P.S.5    Soltis, D.E.6    Soltis, P.S.7    Barbazuk, W.B.8
  • 12
    • 84858611729 scopus 로고    scopus 로고
    • Next-generation sequencing and genome evolution in allopolyploids
    • Buggs, R.J.A., Renny-Byfield, S., Chester, M., et al,. (2012b) Next-generation sequencing and genome evolution in allopolyploids. Am. J. Bot. 99, 372-382.
    • (2012) Am. J. Bot. , vol.99 , pp. 372-382
    • Buggs, R.J.A.1    Renny-Byfield, S.2    Chester, M.3
  • 13
    • 82755194798 scopus 로고    scopus 로고
    • Genome evolution in diploid and tetraploid Coffea species as revealed by comparative analysis of orthologous genome segments
    • Cenci, A., Combes, M.-C., and, Lashermes, P., (2012) Genome evolution in diploid and tetraploid Coffea species as revealed by comparative analysis of orthologous genome segments. Plant Mol. Biol. 78, 135-145.
    • (2012) Plant Mol. Biol. , vol.78 , pp. 135-145
    • Cenci, A.1    Combes, M.-C.2    Lashermes, P.3
  • 14
    • 34347361538 scopus 로고    scopus 로고
    • Genetic divergence and hybrid speciation
    • Chapman, M.A., and, Burke, J.M., (2007) Genetic divergence and hybrid speciation. Evolution, 61, 1773-1780.
    • (2007) Evolution , vol.61 , pp. 1773-1780
    • Chapman, M.A.1    Burke, J.M.2
  • 15
    • 84883050701 scopus 로고    scopus 로고
    • Contribution of subgenomes to the transcriptome and their intertwined regulation in the allopolyploid Coffea arabica L. Grown at contrasted temperatures
    • Combes, M.-C., Dereeper, A., Severac, D., Bertrand, B., and, Lashermes, P., (2013) Contribution of subgenomes to the transcriptome and their intertwined regulation in the allopolyploid Coffea arabica L. grown at contrasted temperatures. New Phytol. 200, 251-260.
    • (2013) New Phytol. , vol.200 , pp. 251-260
    • Combes, M.-C.1    Dereeper, A.2    Severac, D.3    Bertrand, B.4    Lashermes, P.5
  • 16
    • 43949138227 scopus 로고    scopus 로고
    • Blast2GO: A comprehensive suite for functional analysis in plant genomics
    • Conesa, A., and, Gotz, S., (2008) Blast2GO: a comprehensive suite for functional analysis in plant genomics. Int. J. Plant Genomics 2008, 1-13.
    • (2008) Int. J. Plant Genomics , vol.2008 , pp. 1-13
    • Conesa, A.1    Gotz, S.2
  • 17
    • 84868689279 scopus 로고    scopus 로고
    • The impact of climate change on indigenous arabica coffee (Coffea arabica): Predicting future trends and identifying priorities
    • Davis, A.P., Gole, T.W., Baena, S., and, Moat, J., (2012) The impact of climate change on indigenous arabica coffee (Coffea arabica): predicting future trends and identifying priorities. PLoS ONE, 7, e47981.
    • (2012) PLoS ONE , vol.7
    • Davis, A.P.1    Gole, T.W.2    Baena, S.3    Moat, J.4
  • 18
    • 77950931395 scopus 로고    scopus 로고
    • Dating the origins of polyploidy events
    • Doyle, J.J., and, Egan, A.N., (2010) Dating the origins of polyploidy events. New Phytol. 186, 73-85.
    • (2010) New Phytol. , vol.186 , pp. 73-85
    • Doyle, J.J.1    Egan, A.N.2
  • 20
    • 84865772155 scopus 로고    scopus 로고
    • Genomic asymmetry in allopolyploid plants: Wheat as a model
    • Feldman, M., Levy, A., Fahima, T., and, Korol, A., (2012) Genomic asymmetry in allopolyploid plants: wheat as a model. J. Exp. Bot. 63, 5045-5059.
    • (2012) J. Exp. Bot. , vol.63 , pp. 5045-5059
    • Feldman, M.1    Levy, A.2    Fahima, T.3    Korol, A.4
  • 21
    • 77950931393 scopus 로고    scopus 로고
    • Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation
    • Flagel, L.E., and, Wendel, J.F., (2010) Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation. New Phytol. 186, 184-193.
    • (2010) New Phytol. , vol.186 , pp. 184-193
    • Flagel, L.E.1    Wendel, J.F.2
  • 22
    • 84863490293 scopus 로고    scopus 로고
    • Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton
    • Flagel, L.E., Wendel, J.F., and, Udall, J.A., (2012) Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton. BMC Genomics, 13, 302.
    • (2012) BMC Genomics , vol.13 , pp. 302
    • Flagel, L.E.1    Wendel, J.F.2    Udall, J.A.3
  • 23
    • 0037271322 scopus 로고    scopus 로고
    • Cross-species sequence comparisons: A review of methods and available resources
    • Frazer, K.A., Elnitski, L., Church, D.M., Dubchak, I., and, Hardison, R.C., (2003) Cross-species sequence comparisons: a review of methods and available resources. Genome Res. 13, 1-12.
    • (2003) Genome Res. , vol.13 , pp. 1-12
    • Frazer, K.A.1    Elnitski, L.2    Church, D.M.3    Dubchak, I.4    Hardison, R.C.5
  • 24
    • 67651039811 scopus 로고    scopus 로고
    • Bias in plant gene content following different sorts of duplication: Tandem, whole-genome, segmental, or by transposition
    • Freeling, M., (2009) Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition. Annu. Rev. Plant Biol. 60, 433-453.
    • (2009) Annu. Rev. Plant Biol. , vol.60 , pp. 433-453
    • Freeling, M.1
  • 25
    • 77950955273 scopus 로고    scopus 로고
    • Homoeologous recombination in allopolyploids: The polyploid ratchet
    • Gaeta, R.T., and, Pires, J.C., (2010) Homoeologous recombination in allopolyploids: the polyploid ratchet. New Phytol. 186, 18-28.
    • (2010) New Phytol. , vol.186 , pp. 18-28
    • Gaeta, R.T.1    Pires, J.C.2
  • 26
    • 37849034684 scopus 로고    scopus 로고
    • Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype
    • Gaeta, R.T., Pires, J.C., Iniguez-Luy, F., Leon, E., and, Osborn, T.C., (2007) Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype. Plant Cell, 19, 3403-3417.
    • (2007) Plant Cell , vol.19 , pp. 3403-3417
    • Gaeta, R.T.1    Pires, J.C.2    Iniguez-Luy, F.3    Leon, E.4    Osborn, T.C.5
  • 27
    • 33845768012 scopus 로고    scopus 로고
    • Recombination: An underappreciated factor in the evolution of plant genomes
    • Gaut, B.S., Wright, S.I., Rizzon, C., Dvorak, J., and, Anderson, L.K., (2007) Recombination: an underappreciated factor in the evolution of plant genomes. Nat. Rev. Genet. 8, 77-84.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 77-84
    • Gaut, B.S.1    Wright, S.I.2    Rizzon, C.3    Dvorak, J.4    Anderson, L.K.5
  • 29
    • 0013613620 scopus 로고
    • Observations sur la conjugaison chromosomique de Coffea arabica L
    • Grassias, M., and, Kammacher, P., (1975) Observations sur la conjugaison chromosomique de Coffea arabica L. Café Cacao Thé, 19, 177-190.
    • (1975) Café Cacao thé , vol.19 , pp. 177-190
    • Grassias, M.1    Kammacher, P.2
  • 30
    • 32544454998 scopus 로고    scopus 로고
    • Molecular characterization of Ph1 as a major chromosome pairing locus in polyploid wheat
    • Griffiths, S., Sharp, R., Foote, T.N., Bertin, I., Wanous, M., Reader, S., Colas, I., and, Moore, G., (2006) Molecular characterization of Ph1 as a major chromosome pairing locus in polyploid wheat. Nature, 439, 749-752.
    • (2006) Nature , vol.439 , pp. 749-752
    • Griffiths, S.1    Sharp, R.2    Foote, T.N.3    Bertin, I.4    Wanous, M.5    Reader, S.6    Colas, I.7    Moore, G.8
  • 31
    • 84858591099 scopus 로고    scopus 로고
    • Targeted sequence capture as a powerful tool for evolutionary analysis
    • Grover, C.E., Salmon, A., and, Wendel, J.F., (2012) Targeted sequence capture as a powerful tool for evolutionary analysis. Am. J. Bot. 99, 312-319.
    • (2012) Am. J. Bot. , vol.99 , pp. 312-319
    • Grover, C.E.1    Salmon, A.2    Wendel, J.F.3
  • 32
    • 0001077998 scopus 로고
    • Echantillonnage du matériel Coffea arabica récolté en Ethiopie
    • Guillaumet, J.-L., and, Halle, F., (1978) Echantillonnage du matériel Coffea arabica récolté en Ethiopie. Bull.-IFCC 14, 13-18.
    • (1978) Bull. - IFCC , vol.14 , pp. 13-18
    • Guillaumet, J.-L.1    Halle, F.2
  • 34
    • 84859908607 scopus 로고    scopus 로고
    • Genome evolution: Extinction, continuation or explosion?
    • Heslop-Harrison, J.S.P., (2012) Genome evolution: extinction, continuation or explosion? Curr. Opin. Plant Biol. 15, 115-121.
    • (2012) Curr. Opin. Plant Biol. , vol.15 , pp. 115-121
    • Heslop-Harrison, J.S.P.1
  • 35
    • 84862231139 scopus 로고    scopus 로고
    • Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus
    • Higgins, J., Magusin, A., Trick, M., Fraser, F., and, Bancroft, I., (2012) Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus. BMC Genomics, 13, 247.
    • (2012) BMC Genomics , vol.13 , pp. 247
    • Higgins, J.1    Magusin, A.2    Trick, M.3    Fraser, F.4    Bancroft, I.5
  • 36
    • 84858609372 scopus 로고    scopus 로고
    • A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species
    • Ilut, D.C., Coate, J.E., Luciano, A.K., Owens, T.G., May, G.D., Farmer, A., and, Doyle, J.J., (2012) A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species. Am. J. Bot. 99, 383-396.
    • (2012) Am. J. Bot. , vol.99 , pp. 383-396
    • Ilut, D.C.1    Coate, J.E.2    Luciano, A.K.3    Owens, T.G.4    May, G.D.5    Farmer, A.6    Doyle, J.J.7
  • 37
    • 33646890870 scopus 로고    scopus 로고
    • A unique recent origin of the allotetraploid species Arabidopsis suecica: Evidence from nuclear DNA markers
    • Jakobsson, M., Hagenblad, J., Tavaré, S., Säll, T., Halldén, C., Lind-Halldén, C., and, Nordborg, M., (2006) A unique recent origin of the allotetraploid species Arabidopsis suecica: evidence from nuclear DNA markers. Mol. Biol. Evol. 23, 1217-1231.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 1217-1231
    • Jakobsson, M.1    Hagenblad, J.2    Tavaré, S.3    Säll, T.4    Halldén, C.5    Lind-Halldén, C.6    Nordborg, M.7
  • 38
    • 0036241339 scopus 로고    scopus 로고
    • Gene loss, silencing and activation in a newly synthesized wheat allotetraploid
    • Kashkush, K., Feldman, M., and, Levy, A.A., (2002) Gene loss, silencing and activation in a newly synthesized wheat allotetraploid. Genetics, 160, 1651-1659.
    • (2002) Genetics , vol.160 , pp. 1651-1659
    • Kashkush, K.1    Feldman, M.2    Levy, A.A.3
  • 39
    • 48849101871 scopus 로고    scopus 로고
    • Evolution of rDNA in Nicotiana allopolyploids: A potential Link between rDNA homogenization and epigenetics
    • Kovarik, A., Dadejova, M., Lim, Y.K., Chase, M.W., Clarkson, J.J., Knapp, S., and, Leitch, A.R., (2008) Evolution of rDNA in Nicotiana allopolyploids: a potential Link between rDNA homogenization and epigenetics. Ann. Bot. 101, 815-823.
    • (2008) Ann. Bot. , vol.101 , pp. 815-823
    • Kovarik, A.1    Dadejova, M.2    Lim, Y.K.3    Chase, M.W.4    Clarkson, J.J.5    Knapp, S.6    Leitch, A.R.7
  • 40
    • 0001295051 scopus 로고
    • Cytological observations in Coffea. IV
    • Krug, C.A., and, Mendes, A.J.T., (1940) Cytological observations in Coffea. IV. J. Genet. 39, 189-203.
    • (1940) J. Genet. , vol.39 , pp. 189-203
    • Krug, C.A.1    Mendes, A.J.T.2
  • 42
    • 0033980126 scopus 로고    scopus 로고
    • Single-locus inheritance in the allotetraploid Coffea arabica L. And interspecific hybrid C. Arabica x C. Canephora
    • Lashermes, P., Paczek, V., Trouslot, P., Combes, M.C., Couturon, E., and, Charrier, A., (2000) Single-locus inheritance in the allotetraploid Coffea arabica L. and interspecific hybrid C. arabica x C. canephora. J. Hered. 91, 81-85.
    • (2000) J. Hered. , vol.91 , pp. 81-85
    • Lashermes, P.1    Paczek, V.2    Trouslot, P.3    Combes, M.C.4    Couturon, E.5    Charrier, A.6
  • 43
    • 0035810998 scopus 로고    scopus 로고
    • Protein-coding genes are epigenetically regulated in Arabidopsis polyploids
    • Lee, H.-S., and, Chen, Z.J., (2001) Protein-coding genes are epigenetically regulated in Arabidopsis polyploids. Proc. Natl Acad. Sci. USA 98, 6753-6758.
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 6753-6758
    • Lee, H.-S.1    Chen, Z.J.2
  • 44
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li, H., and, Durbin, R., (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinforma, 25, 1754-1760.
    • (2009) Bioinforma , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 45
    • 0034879460 scopus 로고    scopus 로고
    • Polyploid formation in cotton is not accompanied by rapid genomic changes
    • Liu, B., Brubaker, C.L., Mergeai, G., Cronn, R.C., and, Wendel, J.F., (2001) Polyploid formation in cotton is not accompanied by rapid genomic changes. Genome, 44, 321-330.
    • (2001) Genome , vol.44 , pp. 321-330
    • Liu, B.1    Brubaker, C.L.2    Mergeai, G.3    Cronn, R.C.4    Wendel, J.F.5
  • 46
    • 84872597340 scopus 로고    scopus 로고
    • Polyploidy and its effect on evolutionary success: Old questions revisited with new tools
    • Madlung, A., (2013) Polyploidy and its effect on evolutionary success: old questions revisited with new tools. Heredity, 110, 99-104.
    • (2013) Heredity , vol.110 , pp. 99-104
    • Madlung, A.1
  • 47
    • 0005738133 scopus 로고
    • Observaçôes citologicas em Coffea. XV. Microsporogê nese em C. Arabica L
    • Mendes, A.J.T., (1950) Observaçôes citologicas em Coffea. XV. Microsporogênese em C. arabica L. Bargantia, 10, 79-87.
    • (1950) Bargantia , vol.10 , pp. 79-87
    • Mendes, A.J.T.1
  • 48
    • 3142734477 scopus 로고    scopus 로고
    • Construction and characterisation of a BAC library for genome analysis of the allotetraploid coffee species (Coffea arabica L.)
    • Noir, S., Patheyron, S., Combes, M.-C., Lashermes, P., and, Chalhoub, B., (2004) Construction and characterisation of a BAC library for genome analysis of the allotetraploid coffee species (Coffea arabica L.). Theor. Appl. Genet. 109, 225-230.
    • (2004) Theor. Appl. Genet. , vol.109 , pp. 225-230
    • Noir, S.1    Patheyron, S.2    Combes, M.-C.3    Lashermes, P.4    Chalhoub, B.5
  • 49
    • 0012543396 scopus 로고
    • Interspecific hybridization between Coffea arabica L. And tetraploid C. Canephora P. Ex Fr. II. Meiosis in F1 hybrids and back crosses to C. Arabica
    • Owuor, J.B.O., (1985) Interspecific hybridization between Coffea arabica L. and tetraploid C. canephora P. Ex Fr. II. Meiosis in F1 hybrids and back crosses to C. arabica. Euphytica, 34, 355-360.
    • (1985) Euphytica , vol.34 , pp. 355-360
    • Owuor, J.B.O.1
  • 50
    • 84885416118 scopus 로고    scopus 로고
    • SNiPloid: A utility to exploit high-throughput SNP data derived from RNA-Seq in Allopolyploid species
    • Peralta, M., Combes, M.C., Cenci, A., Lashermes, P., and, Dereeper, A., (2013) SNiPloid: a utility to exploit high-throughput SNP data derived from RNA-Seq in Allopolyploid species. Int. J. Plant Genomics 2013, 1-6.
    • (2013) Int. J. Plant Genomics , vol.2013 , pp. 1-6
    • Peralta, M.1    Combes, M.C.2    Cenci, A.3    Lashermes, P.4    Dereeper, A.5
  • 52
    • 0036245438 scopus 로고    scopus 로고
    • Genealogical trees, coalescent theory and the analysis of genetic polymorphisms
    • Rosenberg, N.A., and, Nordborg, M., (2002) Genealogical trees, coalescent theory and the analysis of genetic polymorphisms. Nat. Rev. Genet. 3, 380-390.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 380-390
    • Rosenberg, N.A.1    Nordborg, M.2
  • 54
    • 77950929824 scopus 로고    scopus 로고
    • Homoeologous nonreciprocal recombination in polyploid cotton
    • Salmon, A., Flagel, L., Ying, B., Udall, J.A., and, Wendel, J.F., (2010) Homoeologous nonreciprocal recombination in polyploid cotton. New Phytol. 186, 123-134.
    • (2010) New Phytol. , vol.186 , pp. 123-134
    • Salmon, A.1    Flagel, L.2    Ying, B.3    Udall, J.A.4    Wendel, J.F.5
  • 55
    • 0347388384 scopus 로고    scopus 로고
    • Advances in the study of polyploidy since plant speciation
    • Soltis, D.E., Soltis, P.S., and, Tate, J.A., (2003) Advances in the study of polyploidy since plant speciation. New Phytol. 161, 173-191.
    • (2003) New Phytol. , vol.161 , pp. 173-191
    • Soltis, D.E.1    Soltis, P.S.2    Tate, J.A.3
  • 56
    • 78149250431 scopus 로고    scopus 로고
    • What we still don't know about polyploidy
    • Soltis, D.E., Buggs, R.J.A., Doyle, J.J., and, Soltis, P.S., (2010) What we still don't know about polyploidy. Taxon, 59, 1387-1403.
    • (2010) Taxon , vol.59 , pp. 1387-1403
    • Soltis, D.E.1    Buggs, R.J.A.2    Doyle, J.J.3    Soltis, P.S.4
  • 58
    • 40949097834 scopus 로고    scopus 로고
    • Characterization of Coffea chloroplast microsatellites and evidence for the recent divergence of C. Arabica and C. Eugenioides chloroplast genomes
    • Tesfaye, K., Borsch, T., Govers, K., and, Bekele, E., (2007) Characterization of Coffea chloroplast microsatellites and evidence for the recent divergence of C. arabica and C. eugenioides chloroplast genomes. Genome, 50, 1112-1129.
    • (2007) Genome , vol.50 , pp. 1112-1129
    • Tesfaye, K.1    Borsch, T.2    Govers, K.3    Bekele, E.4
  • 59
    • 15544383703 scopus 로고    scopus 로고
    • Detection of chromosomal rearrangements derived from homeologous recombination in four mapping populations of Brassica napus L
    • Udall, J.A., Quijada, P.A., and, Osborn, T.C., (2005) Detection of chromosomal rearrangements derived from homeologous recombination in four mapping populations of Brassica napus L. Genetics, 169, 967-979.
    • (2005) Genetics , vol.169 , pp. 967-979
    • Udall, J.A.1    Quijada, P.A.2    Osborn, T.C.3
  • 60
    • 33644762929 scopus 로고    scopus 로고
    • Genome wide nonadditive gene regulation in Arabidopsis allotetraploids
    • Wang, J., Tian, L., Lee, H.-S., et al,. (2006) Genome wide nonadditive gene regulation in Arabidopsis allotetraploids. Genetics, 172, 507-517.
    • (2006) Genetics , vol.172 , pp. 507-517
    • Wang, J.1    Tian, L.2    Lee, H.-S.3
  • 61
    • 57749195712 scopus 로고    scopus 로고
    • RNA-Seq: A revolutionary tool for transcriptomics
    • Wang, Z., Gerstein, M., and, Snyder, M., (2009) RNA-Seq: a revolutionary tool for transcriptomics. Nat. Rev. Genet. 10, 57-63.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 62
    • 84872611513 scopus 로고    scopus 로고
    • Homoeolog expression bias and expression level dominance in allopolyploid cotton
    • Yoo, M.-J., Szadkowski, E., and, Wendel, J.F., (2012) Homoeolog expression bias and expression level dominance in allopolyploid cotton. Heredity, 110, 171-180.
    • (2012) Heredity , vol.110 , pp. 171-180
    • Yoo, M.-J.1    Szadkowski, E.2    Wendel, J.F.3
  • 63
    • 84881131997 scopus 로고    scopus 로고
    • Meiosis in polyploidy plants
    • (Soltis, P.S. and Soltis, D.E. eds). Berlin Heidelberg: Springer-Verlag
    • Zielinski, M.-L., and, Scheid, O.M., (2012) Meiosis in polyploidy plants. In Polyploidy and Genome Evolution (, Soltis, P.S., and, Soltis, D.E., eds). Berlin Heidelberg: Springer-Verlag, pp. 33-35.
    • (2012) Polyploidy and Genome Evolution , pp. 33-35
    • Zielinski, M.-L.1    Scheid, O.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.