The origin of cultivated Coffea arabica L. varieties revealed by AFLP and SSR markers

Theoretical and Applied Genetics

Volumn 104, Issue 5, 2002, Pages 894-900

  Anthony, F ^a   Combes, M C ^b   Astorga, C ^a   Bertrand, B ^a   Graziosi, G ^c   Lashermes, P ^b  

^a CATIE   (Costa Rica)

^b INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (France)

^c UNIVERSITY OF TRIESTE   (Italy)

Author keywords

AFLP markers; Coffea arabica; Coffee; Domestication; SSR markers

Indexed keywords

BIODIVERSITY; CULTIVATION; PLANTS (BOTANY);

GENETIC BASES;

GENES;

COFFEA; COFFEA ARABICA; EMBRYOPHYTA; TRANSPOSONS;

EID: 0347785477     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-001-0798-8     Document Type: Article

References (36)

1. Agwanda CO, Lashermes P, Trouslot P, Combes MC, Charrier A (1997) Identification of RAPD markers for resistance to coffee berry disease, Colletotrichum kuhawae, in arabica coffee. Euphytica 97:241-248
2. Anthony F, Berthaud J, Guillaumet JL, Lourd M (1987) Collecting wild Coffea species in Kenya and Tanzania. Plant Genet Resour Newsl 69:23-29
3. Anthony F, Bertrand B, Quiros O, Lashermes P, Berthaud J, Charrier A (2001) Genetic diversity of wild coffee (Coffea arabica L.) using molecular markers. Euphytica 118:53-65
4. Carvalho A (1946) Distribuição geografica e classificação botânica do gênero Coffea com referência especial à espécie arabica. V. Origem e classificaçãbotãnica do C. arabica L. Bol Super Serv Caf 21:174-180
5. Carvalho A (1952) Taxonomia de Coffea arabica L. Caracteres morfologicos dos haploides. Bragantia 12:201-212
6. Carvalho A, Ferwerda FP, Frahm-Leliveld JA, Medina PM, Mendes AJT, Monaco LC (1969) Coffee. In: Ferwerda FP, Wit F (eds) Outlines of Perennial Crop Breeding in the Tropics. Veenman & Zonen, Wageningen, pp 189-241
7. Carvalho A, Medina Filho HP, Fazuoli LC, Guerreiro Filho O, Lima MMA (1991) Aspectos genéticos do cafeeiro. Rev Bras Genet 14:135-183
8. Chevalier A (1929) Les Caféiers du Globe, Fascicule I. Généralités sur les Caféiers. P. Lechevalier, Paris
9. Chevalier A, Dagron M (1928) Recherches historiques sur les débuts de la culture du caféier en Amérique. Commun Actes Acad Sci Colonial Paris
10. Combes MC, Andrzejewski S, Anthony F, Bertrand B, Rovelli P, Graziosi G, Lashermes P (2000) Characterisation of microsatellite loci in Coffea arabica and related coffee species. Mol Ecol 9:1178-1180
11. Cros J, Combes MC, Trouslot P, Anthony F, Hamon S, Charrier A, Lashermes P (1998) Phylogenetic relationships of Coffea species: New evidence based on the chloroplast DNA variation analysis. Mol Phylogenet Evol 9:109-117
12. Eskes AB (1989) Identification, Description and Collection of Coffee Types in P.D.R. Yemen. IPGRI, Rome
13. FAO (1968) FAO Coffee Mission to Ethiopia 1964-1965. FAO, Rome
14. Felsenstein J (1985) Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791
15. Guillaumet JL, Hallé F (1978) Echantillonnage du matériel récolté en Ethiopie. Bull IFCC 14:13-18
16. Haarer AE (1956) Modern Coffee Production. Leonard Hill, London
17. Jaccard P (1908) Nouvelles recherches sur la distribution florale. Bull SOC Vaudoise Sci Nat 44:223-270
18. Jones PA (1956) Notes on the varieties of Coffea arabica in Kenya. Mon Bull Coffee Board Kenya 21:305-309
19. Krug CA, Mendes JET, Carvalho A (1939) Taxonomia de Coffea arabica L. Bol Tec no 62. Instituto Agronomico de Estado, Campinas, Brazil
20. Lashermes P, Trouslot P, Anthony F, Combes MC, Charrier A (1996) Genetic diversity for RAPD markers between cultivated and wild accessions of Coffea arabica. Euphytica 87:59-64
21. Lashermes P, Combes MC, Robert J, Trouslot P, D'Hont A, Anthony F, Charrier A (1999) Molecular characterisation and origin of the Coffea arabica L. genome. Mol Gen Genet 261:259-266
22. Lashermes P, Andrzejewski S, Bertrand B, Combes MC, Dussert S, Graziosi G, Trouslot P, Anthony F (2000) Molecular analysis of introgressive breeding in coffee (Coffea arabica L.). Theor Appl Genet 100:139-146
23. Lejeune JBH (1958) Rapport au Gouvernement Impérial d'Ethiopie sur la Production Caféière. FAO, Rome
24. Meyer FG (1965) Notes on wild Coffea arabica from southwestern Ethiopia, with some historical considerations. Econ Bot 19:136-151
25. Montagnon C, Bouharmont P (1996) Multivariate analysis of phenotypic diversity of Coffea arabica. Genet Res Crop Evol 43:221-227
26. Nei M (1972) Genetic distance between populations. Am Nat 106:283-292
27. Orozco-Castillo C, Chalmers KJ, Waugh R, Powell W(1994) Detection of genetic diversity and selective gene introgressionin in coffee using RAPD markers. Theor Appl Genet 87:934-940
28. Powell W, Morgante M, Andre C, Hanafey M, Vogel J, Tingey S, Rafalski A (1996) The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol Breed 2:225-238
29. Smith RF (1985) A history of coffee. In: Clifford MN, Willson KC (eds) Coffee Botany, Biochemistry and Production of Beans and Beverage. Croom Helm, London Sydney, pp 1-12
30. Sneath PHA, Sokal RR (1973) Numerical Taxonomy. W.H. Freeman, San Francisco
31. Sylvain PG (1955) Some observations on Coffea arabica L. in Ethiopia. Turrialba 5:37-53
32. Thomas AS (1942) The wild arabica coffee on the Boma Plateau, Anglo-Egyptian Sudan. Emp Exp Agric 10:207-212
33. Van de Peer Y, De Wachter R (1994) Treecon for Windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Compnt Applic Biosci 10:569-570
34. Vascotto F, Degli Ivanissevich S, Rovelli P, Anthony F, Anzueto F, Lashermes P, Graziosi G (1999) Microsatellites in Coffea arabica: Construction and selection of two genomic libraries. In: Proc 3rd Int Sem Biotechnol Coffee Agroind. Londrina, Brazil, pp 125-128
35. Vos P, Hogers R, Bleeker M, Reijans M, Van der Lee T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M(1995) AFLP: A new technique of DNA fingerprinting. Nucleic Acids Res 23:4407-4414
36. Wellman FL (1961) Coffee, Botany, Cultivation and Utilization. Leonard Hill Books, London