Contribution of subgenomes to the transcriptome and their intertwined regulation in the allopolyploid Coffea arabica grown at contrasted temperatures

New Phytologist

Volumn 200, Issue 1, 2013, Pages 251-260

  Combes, Marie Christine ^a   Dereeper, Alexis ^a   Severac, Dany ^b   Bertrand, Benoît ^c   Lashermes, Philippe ^a  

^a INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (France)

^b INSTITUT DE GÉNOMIQUE FONCTIONNELLE   (France)

^c CIRAD   (France)

Author keywords

Adaptation; cis trans regulation; Coffee (Coffea arabica); Homoeologous gene expression; Polyploidy; RNA sequencing; Transcriptome

Indexed keywords

ADAPTATION; COFFEE; GENE EXPRESSION; LEAF MORPHOLOGY; PLASTICITY; POLYPLOIDY;

COFFEA ARABICA;

TRANSCRIPTOME;

ADAPTATION; ARTICLE; CIS TRANS-REGULATION; COFFEE; COFFEE (COFFEA ARABICA); DUPLICATE GENE; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; HOMOEOLOGOUS GENE EXPRESSION; PLANT GENE; PLANT GENOME; PLANT LEAF; POLYPLOIDY; RNA-SEQUENCING; SEQUENCE ANALYSIS; TEMPERATURE;

ADAPTATION; CIS TRANS-REGULATION; COFFEE (COFFEA ARABICA); HOMOEOLOGOUS GENE EXPRESSION; POLYPLOIDY; RNA-SEQUENCING; TRANSCRIPTOME;

COFFEA; GENE EXPRESSION REGULATION, PLANT; GENES, DUPLICATE; GENES, PLANT; GENOME, PLANT; PLANT LEAVES; POLYPLOIDY; SEQUENCE ANALYSIS, RNA; TEMPERATURE; TRANSCRIPTOME;

EID: 84883050701     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/nph.12371     Document Type: Article

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