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Volumn 289, Issue 19, 2014, Pages 13284-13294

Cut site selection by the two nuclease domains of the Cas9 RNA-guided endonuclease

Author keywords

[No Author keywords available]

Indexed keywords

SITE SELECTION;

EID: 84900395692     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M113.539726     Document Type: Article
Times cited : (91)

References (46)
  • 3
  • 4
    • 84874624936 scopus 로고    scopus 로고
    • Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease
    • Cho, S. W., Kim, S., Kim, J. M., and Kim, J.-S. (2013) Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease. Nat. Biotechnol. 31, 230-232
    • (2013) Nat. Biotechnol. , vol.31 , pp. 230-232
    • Cho, S.W.1    Kim, S.2    Kim, J.M.3    Kim, J.-S.4
  • 6
    • 84877707375 scopus 로고    scopus 로고
    • One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering
    • Wang, H., Yang, H., Shivalila, C. S., Dawlaty, M. M., Cheng, A. W., Zhang, F., and Jaenisch, R. (2013) One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering. Cell 153, 910-918
    • (2013) Cell , vol.153 , pp. 910-918
    • Wang, H.1    Yang, H.2    Shivalila, C.S.3    Dawlaty, M.M.4    Cheng, A.W.5    Zhang, F.6    Jaenisch, R.7
  • 7
    • 84883785822 scopus 로고    scopus 로고
    • Multiplex and homologous recombinationmediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9
    • Li, J.-F., Norville, J. E., Aach, J., McCormack, M., Zhang, D., Bush, J., Church, G. M., and Sheen, J. (2013) Multiplex and homologous recombinationmediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9. Nat. Biotechnol. 31, 688-691
    • (2013) Nat. Biotechnol. , vol.31 , pp. 688-691
    • Li, J.-F.1    Norville, J.E.2    Aach, J.3    McCormack, M.4    Zhang, D.5    Bush, J.6    Church, G.M.7    Sheen, J.8
  • 8
    • 84883828590 scopus 로고    scopus 로고
    • Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease
    • Nekrasov, V., Staskawicz, B., Weigel, D., Jones, J. D. G., and Kamoun, S. (2013) Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease. Nat. Biotechnol. 31, 691-693
    • (2013) Nat. Biotechnol. , vol.31 , pp. 691-693
    • Nekrasov, V.1    Staskawicz, B.2    Weigel, D.3    Jones, J.D.G.4    Kamoun, S.5
  • 13
    • 84874608929 scopus 로고    scopus 로고
    • RNA-guided editing of bacterial genomes using CRISPR-Cas systems
    • Jiang, W., Bikard, D., Cox, D., Zhang, F., and Marraffini, L. A. (2013) RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat. Biotechnol. 31, 233-239
    • (2013) Nat. Biotechnol. , vol.31 , pp. 233-239
    • Jiang, W.1    Bikard, D.2    Cox, D.3    Zhang, F.4    Marraffini, L.A.5
  • 14
    • 84890787845 scopus 로고    scopus 로고
    • Simple and efficient CRISPR/Cas9-mediated targeted mutagenesis in Xenopus tropicalis
    • Nakayama, T., Fish, M. B., Fisher, M., Oomen-Hajagos, J., Thomsen, G. H., and Grainger, R. M. (2013) Simple and efficient CRISPR/Cas9-mediated targeted mutagenesis in Xenopus tropicalis. Genesis 51, 835-843
    • (2013) Genesis , vol.51 , pp. 835-843
    • Nakayama, T.1    Fish, M.B.2    Fisher, M.3    Oomen-Hajagos, J.4    Thomsen, G.H.5    Grainger, R.M.6
  • 15
    • 84874687019 scopus 로고    scopus 로고
    • Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
    • Qi, L. S., Larson, M. H., Gilbert, L. A., Doudna, J. A., Weissman, J. S., Arkin, A. P., and Lim, W. A. (2013) Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell 152, 1173-1183
    • (2013) Cell , vol.152 , pp. 1173-1183
    • Qi, L.S.1    Larson, M.H.2    Gilbert, L.A.3    Doudna, J.A.4    Weissman, J.S.5    Arkin, A.P.6    Lim, W.A.7
  • 16
    • 84882986957 scopus 로고    scopus 로고
    • Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system
    • Bikard, D., Jiang, W., Samai, P., Hochschild, A., Zhang, F., and Marraffini, L. A. (2013) Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system. Nucleic Acids Res. 41, 7429-7437
    • (2013) Nucleic Acids Res. , vol.41 , pp. 7429-7437
    • Bikard, D.1    Jiang, W.2    Samai, P.3    Hochschild, A.4    Zhang, F.5    Marraffini, L.A.6
  • 19
    • 23844505202 scopus 로고    scopus 로고
    • Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin
    • Bolotin, A., Quinquis, B., Sorokin, A., and Ehrlich, S. D. (2005) Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin. Microbiology 151, 2551-2561
    • (2005) Microbiology , vol.151 , pp. 2551-2561
    • Bolotin, A.1    Quinquis, B.2    Sorokin, A.3    Ehrlich, S.D.4
  • 20
    • 15844390228 scopus 로고    scopus 로고
    • CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies
    • Pourcel, C., Salvignol, G., and Vergnaud, G. (2005) CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies. Microbiology 151, 653-663
    • (2005) Microbiology , vol.151 , pp. 653-663
    • Pourcel, C.1    Salvignol, G.2    Vergnaud, G.3
  • 21
    • 16444385662 scopus 로고    scopus 로고
    • Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements
    • Mojica, F. J. M., Díez-Villaseñor, C., García- Martínez, J., and Soria, E. (2005) Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements. J. Mol. Evol. 60, 174-182
    • (2005) J. Mol. Evol. , vol.60 , pp. 174-182
    • Mojica, F.J.M.1    Díez-Villaseñor, C.2    García- Martínez, J.3    Soria, E.4
  • 23
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Jinek, M., Chylinski, K., Fonfara, I., Hauer, M., Doudna, J. A., and Charpentier, E. (2012) A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337, 816-821
    • (2012) Science , vol.337 , pp. 816-821
    • Jinek, M.1    Chylinski, K.2    Fonfara, I.3    Hauer, M.4    Doudna, J.A.5    Charpentier, E.6
  • 24
    • 84866859751 scopus 로고    scopus 로고
    • Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria
    • Gasiunas, G., Barrangou, R., Horvath, P., and Siksnys, V. (2012) Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria. Proc. Natl. Acad. Sci. U. S. A. 109, E2579-E2586
    • (2012) Proc. Natl. Acad. Sci. U. S. A. , vol.109
    • Gasiunas, G.1    Barrangou, R.2    Horvath, P.3    Siksnys, V.4
  • 26
    • 84879026965 scopus 로고    scopus 로고
    • Protospacer recognition motifs: Mixed identities and functional diversity
    • Shah, S. A., Erdmann, S., Mojica, F. J. M., and Garrett, R. A. (2013) Protospacer recognition motifs: mixed identities and functional diversity. RNA Biol. 10, 891-899
    • (2013) RNA Biol. , vol.10 , pp. 891-899
    • Shah, S.A.1    Erdmann, S.2    Mojica, F.J.M.3    Garrett, R.A.4
  • 29
    • 84884856342 scopus 로고    scopus 로고
    • Cas9 as a versatile tool for engineering biology
    • Mali, P., Esvelt, K. M., and Church, G. M. (2013) Cas9 as a versatile tool for engineering biology. Nat. Methods 10, 957-963
    • (2013) Nat. Methods , vol.10 , pp. 957-963
    • Mali, P.1    Esvelt, K.M.2    Church, G.M.3
  • 31
    • 0029983371 scopus 로고    scopus 로고
    • T7 vectors with modified T7lac promoter for expression of proteins in Escherichia coli
    • Peränen, J., Rikkonen, M., Hyvönen, M., and Kääriäinen, L. (1996) T7 vectors with modified T7lac promoter for expression of proteins in Escherichia coli. Anal. Biochem. 236, 371-373
    • (1996) Anal. Biochem. , vol.236 , pp. 371-373
    • Peränen, J.1    Rikkonen, M.2    Hyvönen, M.3    Kääriäinen, L.4
  • 32
    • 84881256166 scopus 로고    scopus 로고
    • In vitro reconstitution of an Escherichia coli RNA-guided immune system reveals unidirectional, ATP-dependent degradation of DNA target
    • Mulepati, S., and Bailey, S. (2013) In vitro reconstitution of an Escherichia coli RNA-guided immune system reveals unidirectional, ATP-dependent degradation of DNA target. J. Biol. Chem. 288, 22184-22192
    • (2013) J. Biol. Chem. , vol.288 , pp. 22184-22192
    • Mulepati, S.1    Bailey, S.2
  • 34
    • 0034918958 scopus 로고    scopus 로고
    • Strand breaks in whole plasmid DNA produced by the decay of 125I in a triplex-forming oligonucleotide
    • Panyutin, I. V., Luu, A. N., Panyutin, I. G., and Neumann, R. D. (2001) Strand breaks in whole plasmid DNA produced by the decay of 125I in a triplex-forming oligonucleotide. Radiat. Res. 156, 158-166
    • (2001) Radiat. Res. , vol.156 , pp. 158-166
    • Panyutin, I.V.1    Luu, A.N.2    Panyutin, I.G.3    Neumann, R.D.4
  • 35
    • 84879016248 scopus 로고    scopus 로고
    • Crrna and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus
    • Karvelis, T., Gasiunas, G., Miksys, A., Barrangou, R., Horvath, P., and Siksnys, V. (2013) crRNA and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus. RNA Biol. 10, 841-851
    • (2013) RNA Biol. , vol.10 , pp. 841-851
    • Karvelis, T.1    Gasiunas, G.2    Miksys, A.3    Barrangou, R.4    Horvath, P.5    Siksnys, V.6
  • 36
    • 84864085433 scopus 로고    scopus 로고
    • Cleavage of phage DNA by the Streptococcus thermophilus CRISPR3-Cas system
    • Magadán, A. H., Dupuis, M.-È., Villion, M., and Moineau, S. (2012) Cleavage of phage DNA by the Streptococcus thermophilus CRISPR3-Cas system. PLoS ONE 7, e40913
    • (2012) PLoS ONE , vol.7
    • Magadán, A.H.1    Dupuis, M.-È.2    Villion, M.3    Moineau, S.4
  • 38
    • 84895871173 scopus 로고    scopus 로고
    • DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
    • Sternberg, S. H., Redding, S., Jinek, M., Greene, E. C., and Doudna, J. A. (2014) DNA interrogation by the CRISPR RNA-guided endonuclease Cas9. Nature 507, 62-67
    • (2014) Nature , vol.507 , pp. 62-67
    • Sternberg, S.H.1    Redding, S.2    Jinek, M.3    Greene, E.C.4    Doudna, J.A.5
  • 41
    • 84861990812 scopus 로고    scopus 로고
    • Mechanism of foreign DNA selection in a bacterial adaptive immune system
    • Sashital, D. G., Wiedenheft, B., and Doudna, J. A. (2012) Mechanism of foreign DNA selection in a bacterial adaptive immune system. Mol. Cell 46, 606-615
    • (2012) Mol. Cell , vol.46 , pp. 606-615
    • Sashital, D.G.1    Wiedenheft, B.2    Doudna, J.A.3
  • 42
    • 84863329741 scopus 로고    scopus 로고
    • Crystal structure of the largest subunit of a bacterial RNA-guided immune complex and its role in DNA target binding
    • Mulepati, S., Orr, A., and Bailey, S. (2012) Crystal structure of the largest subunit of a bacterial RNA-guided immune complex and its role in DNA target binding. J. Biol. Chem. 287, 22445-22449
    • (2012) J. Biol. Chem. , vol.287 , pp. 22445-22449
    • Mulepati, S.1    Orr, A.2    Bailey, S.3
  • 43
    • 79958825675 scopus 로고    scopus 로고
    • An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3
    • Sashital, D. G., Jinek, M., and Doudna, J. A. (2011) An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3. Nat. Struct. Mol. Biol. 18, 680-687
    • (2011) Nat. Struct. Mol. Biol. , vol.18 , pp. 680-687
    • Sashital, D.G.1    Jinek, M.2    Doudna, J.A.3


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