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Volumn 58, Issue 5, 2014, Pages 561-568

Exome sequencing identifies a novel FOXP3 mutation in a 2-generation family with inflammatory bowel disease

Author keywords

atypical; enteropathy; exome; immune dysregulation; inflammatory bowel disease; polyendocrinopathy; X linked

Indexed keywords

TRANSCRIPTION FACTOR FOXP3; FORKHEAD TRANSCRIPTION FACTOR; FOXP3 PROTEIN, HUMAN;

EID: 84900303379     PISSN: 02772116     EISSN: 15364801     Source Type: Journal    
DOI: 10.1097/MPG.0000000000000302     Document Type: Article
Times cited : (45)

References (44)
  • 1
    • 84868336049 scopus 로고    scopus 로고
    • Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease
    • Jostins L, Ripke S, Weersma RK, et al. Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. Nature 2012;491:119-24.
    • (2012) Nature , vol.491 , pp. 119-124
    • Jostins, L.1    Ripke, S.2    Weersma, R.K.3
  • 2
    • 70649113728 scopus 로고    scopus 로고
    • Common variants at five new loci associated with early-onset inflammatory bowel disease
    • Imielinski M, Baldassano RN, Griffiths A, et al. Common variants at five new loci associated with early-onset inflammatory bowel disease. Nat Genet 2009;41:1335-40.
    • (2009) Nat Genet , vol.41 , pp. 1335-1340
    • Imielinski, M.1    Baldassano, R.N.2    Griffiths, A.3
  • 3
    • 84873733916 scopus 로고    scopus 로고
    • IL-10R polymorphisms are associated with very-early-onset ulcerative colitis
    • Moran CJ, Walters TD, Guo CH, et al. IL-10R polymorphisms are associated with very-early-onset ulcerative colitis. Inflamm Bowel Dis 2012;19:115-23.
    • (2012) Inflamm Bowel Dis , vol.19 , pp. 115-123
    • Moran, C.J.1    Walters, T.D.2    Guo, C.H.3
  • 4
    • 73149123343 scopus 로고    scopus 로고
    • Genetic diagnosis by whole exome capture and massively parallel DNA sequencing
    • Choi M, Scholl UI, Ji W, et al. Genetic diagnosis by whole exome capture and massively parallel DNA sequencing. Proc Natl Acad Sci USA 2009;106:19096-101.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 19096-19101
    • Choi, M.1    Scholl, U.I.2    Ji, W.3
  • 5
    • 79251645624 scopus 로고    scopus 로고
    • Making a definitive diagnosis: Successful clinical application of whole exome sequencing in a child with intractable inflammatory bowel disease
    • Worthey EA, Mayer AN, Syverson GD, et al. Making a definitive diagnosis: successful clinical application of whole exome sequencing in a child with intractable inflammatory bowel disease. Genet Med 2011;13:255-62.
    • (2011) Genet Med , vol.13 , pp. 255-262
    • Worthey, E.A.1    Mayer, A.N.2    Syverson, G.D.3
  • 6
    • 34548292504 scopus 로고    scopus 로고
    • PLINK: A tool set for whole-genome association and population-based linkage analyses
    • Purcell S, Neale B, Todd-Brown K, et al. PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Human Genet 2007;81:559-75.
    • (2007) Am J Human Genet , vol.81 , pp. 559-575
    • Purcell, S.1    Neale, B.2    Todd-Brown, K.3
  • 7
    • 12344259648 scopus 로고    scopus 로고
    • Analysis of array CGH data: From signal ratio to gain and loss of DNA regions
    • Hupe P, Stransky N, Thiery JP, et al. Analysis of array CGH data: from signal ratio to gain and loss of DNA regions. Bioinformatics 2004;20:3413-22.
    • (2004) Bioinformatics , vol.20 , pp. 3413-3422
    • Hupe, P.1    Stransky, N.2    Thiery, J.P.3
  • 8
    • 38849183559 scopus 로고    scopus 로고
    • Sparse representation and Bayesian detection of genome copy number alterations from microarray data
    • Pique-Regi R, Monso-Varona J, Ortega A, et al. Sparse representation and Bayesian detection of genome copy number alterations from microarray data. Bioinformatics 2008;24:309-18.
    • (2008) Bioinformatics , vol.24 , pp. 309-318
    • Pique-Regi, R.1    Monso-Varona, J.2    Ortega, A.3
  • 9
    • 55549089660 scopus 로고    scopus 로고
    • Accurate whole human genome sequencing using reversible terminator chemistry
    • Bentley DR, Balasubramanian S, Swerdlow HP, et al. Accurate whole human genome sequencing using reversible terminator chemistry. Nature 2008;456:53-9.
    • (2008) Nature , vol.456 , pp. 53-59
    • Bentley, D.R.1    Balasubramanian, S.2    Swerdlow, H.P.3
  • 10
    • 77956640112 scopus 로고    scopus 로고
    • SeqAnt: A web service to rapidly identify and annotate DNA sequence variations
    • Shetty AC, Athri P, Mondal K, et al. SeqAnt: a web service to rapidly identify and annotate DNA sequence variations. BMC Bioinformatics 2010;11:471.
    • (2010) BMC Bioinformatics , vol.11 , pp. 471
    • Shetty, A.C.1    Athri, P.2    Mondal, K.3
  • 11
    • 0035026704 scopus 로고    scopus 로고
    • Predicting deleterious amino acid substitutions
    • Ng PC, Henikoff S. Predicting deleterious amino acid substitutions. Genome Res 2001;11:863-74.
    • (2001) Genome Res , vol.11 , pp. 863-874
    • Ng, P.C.1    Henikoff, S.2
  • 12
    • 0036713510 scopus 로고    scopus 로고
    • Human non-synonymous SNPs: Server and survey
    • Ramensky V, Bork P, Sunyaev S. Human non-synonymous SNPs: server and survey. Nucleic Acids Res 2002;30:3894-900.
    • (2002) Nucleic Acids Res , vol.30 , pp. 3894-3900
    • Ramensky, V.1    Bork, P.2    Sunyaev, S.3
  • 13
    • 24744432528 scopus 로고    scopus 로고
    • Reduced frequencies and suppressive function of CD4CD25hi regulatory T cells in patients with chronic lymphocytic leukemia after therapy with fludarabine
    • Beyer M, Kochanek M, Darabi K, et al. Reduced frequencies and suppressive function of CD4CD25hi regulatory T cells in patients with chronic lymphocytic leukemia after therapy with fludarabine. Blood 2005;106:2018-25.
    • (2005) Blood , vol.106 , pp. 2018-2025
    • Beyer, M.1    Kochanek, M.2    Darabi, K.3
  • 14
    • 33746342994 scopus 로고    scopus 로고
    • Foxp3 CD25 CD4 natural regulatory T cells in dominant self-tolerance and autoimmune disease
    • Sakaguchi S, Ono M, Setoguchi R, et al. Foxp3 CD25 CD4 natural regulatory T cells in dominant self-tolerance and autoimmune disease. Immunol Rev 2006;212:8-27.
    • (2006) Immunol Rev , vol.212 , pp. 8-27
    • Sakaguchi, S.1    Ono, M.2    Setoguchi, R.3
  • 15
    • 0033105648 scopus 로고    scopus 로고
    • Cellular and molecular characterization of the scurfy mouse mutant
    • Clark LB, Appleby MW, Brunkow ME, et al. Cellular and molecular characterization of the scurfy mouse mutant. J Immunol 1999;162: 2546-54.
    • (1999) J Immunol , vol.162 , pp. 2546-2554
    • Clark, L.B.1    Appleby, M.W.2    Brunkow, M.E.3
  • 16
    • 0035162560 scopus 로고    scopus 로고
    • Disruption of a new forkhead/winged-helix protein, scurfin, results in the fatal lympho-proliferative disorder of the scurfy mouse
    • Brunkow ME, Jeffery EW, Hjerrild KA, et al. Disruption of a new forkhead/winged-helix protein, scurfin, results in the fatal lympho-proliferative disorder of the scurfy mouse. Nat Genet 2001;27:68-73.
    • (2001) Nat Genet , vol.27 , pp. 68-73
    • Brunkow, M.E.1    Jeffery, E.W.2    Hjerrild, K.A.3
  • 17
    • 0034526617 scopus 로고    scopus 로고
    • JM2, encoding a fork head-related protein, is mutated in X-linked autoimmunity-allergic disregulation syndrome
    • Chatila TA, Blaeser F, Ho N, et al. JM2, encoding a fork head-related protein, is mutated in X-linked autoimmunity-allergic disregulation syndrome. J Clin Invest 2000;106:R75-81.
    • (2000) J Clin Invest , vol.106
    • Chatila, T.A.1    Blaeser, F.2    Ho, N.3
  • 18
    • 0035167967 scopus 로고    scopus 로고
    • The immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome (IPEX) is caused by mutations of FOXP3
    • Bennett CL, Christie J, Ramsdell F, et al. The immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome (IPEX) is caused by mutations of FOXP3. Nat Genet 2001;27:20-1.
    • (2001) Nat Genet , vol.27 , pp. 20-21
    • Bennett, C.L.1    Christie, J.2    Ramsdell, F.3
  • 19
    • 0036961493 scopus 로고    scopus 로고
    • Immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome: A model of immune dysregulation
    • Torgerson TR, Ochs HD. Immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome: a model of immune dysregulation. Curr Opin Allergy Clin Immunol 2002;2:481-7.
    • (2002) Curr Opin Allergy Clin Immunol , vol.2 , pp. 481-487
    • Torgerson, T.R.1    Ochs, H.D.2
  • 20
    • 57249097253 scopus 로고    scopus 로고
    • Clinical and molecular profile of a new series of patients with immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome: Inconsistent correlation between forkhead box protein 3 expression and disease severity
    • Gambineri E, Perroni L, Passerini L, et al. Clinical and molecular profile of a new series of patients with immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome: inconsistent correlation between forkhead box protein 3 expression and disease severity. J Allergy Clin Immunol 2008;122:1105.e1-12.e1.
    • (2008) J Allergy Clin Immunol , vol.122
    • Gambineri, E.1    Perroni, L.2    Passerini, L.3
  • 21
    • 0020038580 scopus 로고
    • An X-linked syndrome of diarrhea, polyendocrinopathy, and fatal infection in infancy
    • Powell BR, Buist NR, Stenzel P. An X-linked syndrome of diarrhea, polyendocrinopathy, and fatal infection in infancy. J Pediatr 1982; 100:731-7.
    • (1982) J Pediatr , vol.100 , pp. 731-737
    • Powell, B.R.1    Buist, N.R.2    Stenzel, P.3
  • 22
    • 0038434099 scopus 로고    scopus 로고
    • Immune dysregulation, polyendocrinopathy, enteropathy, and X-linked inheritance (IPEX), a syndrome of systemic autoimmunity caused by mutations of FOXP3, a critical regulator of T-cell homeostasis
    • Gambineri E, Torgerson TR, Ochs HD. Immune dysregulation, polyendocrinopathy, enteropathy, and X-linked inheritance (IPEX), a syndrome of systemic autoimmunity caused by mutations of FOXP3, a critical regulator of T-cell homeostasis. Curr Opin Rheumatol 2003;15:430-5.
    • (2003) Curr Opin Rheumatol , vol.15 , pp. 430-435
    • Gambineri, E.1    Torgerson, T.R.2    Ochs, H.D.3
  • 23
    • 0034812349 scopus 로고    scopus 로고
    • A rare polyadenylation signal mutation of the FOXP3 gene (AAUAAA-AAUGAA) leads to the IPEX syndrome
    • Bennett CL, Brunkow ME, Ramsdell F, et al. A rare polyadenylation signal mutation of the FOXP3 gene (AAUAAA-AAUGAA) leads to the IPEX syndrome. Immunogenetics 2001;53:435-9.
    • (2001) Immunogenetics , vol.53 , pp. 435-439
    • Bennett, C.L.1    Brunkow, M.E.2    Ramsdell, F.3
  • 24
    • 34247862225 scopus 로고    scopus 로고
    • Severe food allergy as a variant of IPEX syndrome caused by a deletion in a noncoding region of the FOXP3 gene
    • Torgerson TR, Linane A, Moes N, et al. Severe food allergy as a variant of IPEX syndrome caused by a deletion in a noncoding region of the FOXP3 gene. Gastroenterology 2007;132:1705-17.
    • (2007) Gastroenterology , vol.132 , pp. 1705-1717
    • Torgerson, T.R.1    Linane, A.2    Moes, N.3
  • 25
    • 30344482899 scopus 로고    scopus 로고
    • Clinical and molecular findings in IPEX syndrome
    • Myers AK, Perroni L, Costigan C, et al. Clinical and molecular findings in IPEX syndrome. Arch Dis Child 2006;91:63-4.
    • (2006) Arch Dis Child , vol.91 , pp. 63-64
    • Myers, A.K.1    Perroni, L.2    Costigan, C.3
  • 26
    • 33745211931 scopus 로고    scopus 로고
    • Defective regulatory and effector T cell functions in patients with FOXP3 mutations
    • Bacchetta R, Passerini L, Gambineri E, et al. Defective regulatory and effector T cell functions in patients with FOXP3 mutations. J Clin Invest 2006;116:1713-22.
    • (2006) J Clin Invest , vol.116 , pp. 1713-1722
    • Bacchetta, R.1    Passerini, L.2    Gambineri, E.3
  • 27
    • 33646240855 scopus 로고    scopus 로고
    • Single-cell analysis of normal and FOXP3-mutant human T cells: FOXP3 expression without regulatory T cell development
    • Gavin MA, Torgerson TR, Houston E, et al. Single-cell analysis of normal and FOXP3-mutant human T cells: FOXP3 expression without regulatory T cell development. Proc Natl Acad Sci USA 2006; 103:6659-64.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 6659-6664
    • Gavin, M.A.1    Torgerson, T.R.2    Houston, E.3
  • 28
    • 18244378309 scopus 로고    scopus 로고
    • Novel mutations of FOXP3 in two Japanese patients with immune dysregulation, polyendocrinopathy, enteropathy, X linked syndrome (IPEX)
    • Kobayashi I, Shiari R, Yamada M, et al. Novel mutations of FOXP3 in two Japanese patients with immune dysregulation, polyendocrinopathy, enteropathy, X linked syndrome (IPEX). J Med Genet 2001;38:874-6.
    • (2001) J Med Genet , vol.38 , pp. 874-876
    • Kobayashi, I.1    Shiari, R.2    Yamada, M.3
  • 29
    • 34548357320 scopus 로고    scopus 로고
    • Immunodysregulation, poly-endocrinopathy, enteropathy, X-linked (IPEX) syndrome: An unusual cause of proteinuria in infancy
    • Moudgil A, Perriello P, Loechelt B, et al. Immunodysregulation, poly-endocrinopathy, enteropathy, X-linked (IPEX) syndrome: an unusual cause of proteinuria in infancy. Pediatr Nephrol 2007;22:1799-802.
    • (2007) Pediatr Nephrol , vol.22 , pp. 1799-1802
    • Moudgil, A.1    Perriello, P.2    Loechelt, B.3
  • 30
    • 33646129676 scopus 로고    scopus 로고
    • Mechanistic associations of a mild phenotype of immunodysregulation, polyendocrinopathy, enteropathy, x-linked syndrome
    • De Benedetti F, Insalaco A, Diamanti A, et al. Mechanistic associations of a mild phenotype of immunodysregulation, polyendocrinopathy, enteropathy, x-linked syndrome. Clin Gastroenterol Hepatol 2006; 4:653-9.
    • (2006) Clin Gastroenterol Hepatol , vol.4 , pp. 653-659
    • De Benedetti, F.1    Insalaco, A.2    Diamanti, A.3
  • 31
    • 59249098409 scopus 로고    scopus 로고
    • Decreased FoxP3 gene expression in the nasal secretions from patients with allergic rhinitis
    • Lee SM, Gao B, Dahl M, et al. Decreased FoxP3 gene expression in the nasal secretions from patients with allergic rhinitis. Otolaryngol Head Neck Surg 2009;140:197-201.
    • (2009) Otolaryngol Head Neck Surg , vol.140 , pp. 197-201
    • Lee, S.M.1    Gao, B.2    Dahl, M.3
  • 32
    • 60449092282 scopus 로고    scopus 로고
    • Cutaneous manifestations of immune dysregulation, polyendocrinopathy, enteropathy, X-linked (IPEX) syndrome
    • Halabi-Tawil M, Ruemmele FM, Fraitag S, et al. Cutaneous manifestations of immune dysregulation, polyendocrinopathy, enteropathy, X-linked (IPEX) syndrome. Br J Dermatol 2009;160:645-51.
    • (2009) Br J Dermatol , vol.160 , pp. 645-651
    • Halabi-Tawil, M.1    Ruemmele, F.M.2    Fraitag, S.3
  • 33
    • 67650283786 scopus 로고    scopus 로고
    • Minimal change nephrotic syndrome associated with immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome
    • Hashimura Y, Nozu K, Kanegane H, et al. Minimal change nephrotic syndrome associated with immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome. Pediatr Nephrol 2009;24:1181-6.
    • (2009) Pediatr Nephrol , vol.24 , pp. 1181-1186
    • Hashimura, Y.1    Nozu, K.2    Kanegane, H.3
  • 34
    • 77958582858 scopus 로고    scopus 로고
    • Identification of new FOXP3 mutations and prenatal diagnosis of IPEX syndrome
    • Harbuz R, Lespinasse J, Boulet S, et al. Identification of new FOXP3 mutations and prenatal diagnosis of IPEX syndrome. Prenat Diagn 2010;30:1072-8.
    • (2010) Prenat Diagn , vol.30 , pp. 1072-1078
    • Harbuz, R.1    Lespinasse, J.2    Boulet, S.3
  • 35
    • 64549112708 scopus 로고    scopus 로고
    • Clinical heterogeneity in patients with FOXP3 mutations presenting with permanent neonatal diabetes
    • Rubio-Cabezas O, Minton JA, Caswell R, et al. Clinical heterogeneity in patients with FOXP3 mutations presenting with permanent neonatal diabetes. Diabetes Care 2009;32:111-6.
    • (2009) Diabetes Care , vol.32 , pp. 111-116
    • Rubio-Cabezas, O.1    Minton, J.A.2    Caswell, R.3
  • 36
    • 79961119889 scopus 로고    scopus 로고
    • Clinical and molecular characteristics of immunodysregulation, polyendocrinopathy, enteropathy, X-linked syndrome in China
    • An YF, Xu F, Wang M, et al. Clinical and molecular characteristics of immunodysregulation, polyendocrinopathy, enteropathy, X-linked syndrome in China. Scand J Immunol 2011; 74: 304-9.
    • (2011) Scand J Immunol , vol.74 , pp. 304-309
    • An, Y.F.1    Xu, F.2    Wang, M.3
  • 37
    • 35348984863 scopus 로고    scopus 로고
    • Molecular basis of neonatal diabetes in Japanese patients
    • Suzuki S, Makita Y, Mukai T, et al. Molecular basis of neonatal diabetes in Japanese patients. J Clin Endocrinol Metab 2007;92:3979-85.
    • (2007) J Clin Endocrinol Metab , vol.92 , pp. 3979-3985
    • Suzuki, S.1    Makita, Y.2    Mukai, T.3
  • 38
    • 0035163909 scopus 로고    scopus 로고
    • X-linked neonatal diabetes mellitus, enteropathy and endocrinopathy syndrome is the human equivalent of mouse scurfy
    • Wildin RS, Ramsdell F, Peake J, et al. X-linked neonatal diabetes mellitus, enteropathy and endocrinopathy syndrome is the human equivalent of mouse scurfy. Nat Genet 2001;27:18-20.
    • (2001) Nat Genet , vol.27 , pp. 18-20
    • Wildin, R.S.1    Ramsdell, F.2    Peake, J.3
  • 39
    • 77951460081 scopus 로고    scopus 로고
    • X-linked thrombocytopenia (XLT) due to WAS mutations: Clinical characteristics, long-term outcome, and treatment options
    • Albert MH, Bittner TC, Nonoyama S, et al. X-linked thrombocytopenia (XLT) due to WAS mutations: clinical characteristics, long-term outcome, and treatment options. Blood 2010;115:3231-8.
    • (2010) Blood , vol.115 , pp. 3231-3238
    • Albert, M.H.1    Bittner, T.C.2    Nonoyama, S.3
  • 40
    • 33747762947 scopus 로고    scopus 로고
    • Analysis of FOXP3 reveals multiple domains required for its function as a transcriptional repressor
    • Lopes JE, Torgerson TR, Schubert LA, et al. Analysis of FOXP3 reveals multiple domains required for its function as a transcriptional repressor. J Immunol 2006;177:3133-42.
    • (2006) J Immunol , vol.177 , pp. 3133-3142
    • Lopes, J.E.1    Torgerson, T.R.2    Schubert, L.A.3
  • 41
    • 33745463549 scopus 로고    scopus 로고
    • The mutant leucine-zipper domain impairs both dimerization and suppressive function of Foxp3 in T cells
    • Chae WJ, Henegariu O, Lee SK, et al. The mutant leucine-zipper domain impairs both dimerization and suppressive function of Foxp3 in T cells. Proc Natl Acad Sci USA 2006;103:9631-6.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 9631-9636
    • Chae, W.J.1    Henegariu, O.2    Lee, S.K.3
  • 42
    • 34547821980 scopus 로고    scopus 로고
    • FOXP3 is a homo-oligomer and a component of a supramolecular regulatory complex disabled in the human XLAAD/IPEX autoimmune disease
    • Li B, Samanta A, Song X, et al. FOXP3 is a homo-oligomer and a component of a supramolecular regulatory complex disabled in the human XLAAD/IPEX autoimmune disease. Int Immunol 2007;19: 825-35.
    • (2007) Int Immunol , vol.19 , pp. 825-835
    • Li, B.1    Samanta, A.2    Song, X.3
  • 43
    • 84863212714 scopus 로고    scopus 로고
    • Structural and biological features of FOXP3 dimerization relevant to regulatory T cell function
    • Song X, Li B, Xiao Y, et al. Structural and biological features of FOXP3 dimerization relevant to regulatory T cell function. Cell Rep 2012;1:665-75.
    • (2012) Cell Rep , vol.1 , pp. 665-675
    • Song, X.1    Li, B.2    Xiao, Y.3
  • 44
    • 33845983223 scopus 로고    scopus 로고
    • Successful bone marrow transplantation for IPEX syndrome after reduced-intensity conditioning
    • Rao A, Kamani N, Filipovich A, et al. Successful bone marrow transplantation for IPEX syndrome after reduced-intensity conditioning. Blood 2007;109:383-5.
    • (2007) Blood , vol.109 , pp. 383-385
    • Rao, A.1    Kamani, N.2    Filipovich, A.3


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