Stress, mutators, mutations and stress resistance

Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation

Volumn , Issue , 2010, Pages 471-483

  Gressel, Jonathan ^a   Levy, Avraham A ^a  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

Author keywords

epigenetic effects; evolution; mutators; transposons

Indexed keywords

EID: 84900102551     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-90-481-3112-9_21     Document Type: Chapter

References (76)

1. Abdelnoor RV, Yule R, Elo A, Christensen AC, Meyer-Gauen G, Mackensie SA (2003) Substoichiometric shifting in the plant mitochondrial genome is influenced by a gene homologous toi MutS. Proc Natl Acad Sci USA 100:5968-5973
2. Arntzen CJ, Duesing JH (1983) Chloroplast-encoded herbicide resistance. In: Ahmand F, Downey K, Schultz J, Voellmy RW (eds) Advances in gene technology. Academic Press, New York, pp 273-299
3. Boe L, Danielsen M, Knudsen S, Petersen JB, Maymann J, Jensen PR (2000) The frequency of mutators in populations of Escherichia coli. Mutat Res 448:47-55
4. Boyko A, Filkowski J, Kovalchuk I (2005) Homologous recombination in plants is temperature-and day-length dependent. Mutat Res-Fundam Mol Mech Mutagen 572:73-83
5. Bray CM, West CE (2005) DNA repair mechanisms in plants: crucial sensors and effectors for the maintenance of genome integrity. New Phytol 168:511-528
6. Bruce TJA, Matthes MC, Napier JA, Pickett JA (2007) Stressful "memories" of plants: evidence and possible mechanisms. Plant Sci 173:603-608
7. Byrne M, Taylor WC (1996) Analysis of mutator-induced mutations in the iojap gene of maize. Mol Gen Genet 252:216-220
8. Crow JF (1957) Genetics of insect resistance to chemicals. Ann Rev Entomol 2:227-246
9. Cunliffe K (2005) The ryegrass complex. In: Gressel J (ed) Crop ferality and volunteerism. CRC Press, Boca Raton, FL, pp 236-242
10. Diao XM, Freeling M, Lisch D (2006) Horizontal transfer of a plant transposon. PLoS Biol 4:119-128
11. Dominguez O, Ruiz JF, de Lera TL, Garcia-Diaz M, Gonzalez MA, Kirchhoff T, Martinez AC, Bernad A, Blanco L (2000) DNA polymerase mu (Pol mu), homologous to TdT, could act as a DNA mutator in eukaryotic cells. EMBO J 19:1731-1742
12. Ducruet JM, Gasquez J (1978) Observation of whole leaf fluorescence and demonstration of chloroplastic resistance to atrazine in Chenopodium album L. and Poa annua L. Chemosphere 8:695-699
13. Duesing JH (1983) Genetic analysis of herbicide resistance. Proc North Central Weed Control Conf 38:143-147
14. Fernandes J, Dong QF, Schneider B, Morrow DJ, Nan GL, Brendel V, Walbot V (2004) Genome-wide mutagenesis of Zea mays L. using RescueMu transposons. Genome Biol 5(10):R82
15. Friedberg EC, Gerlach VL (1999) Novel DNA polymerases offer clues to the molecular basis of mutagenesis. Cell 98:413-416
16. Funchain P, Yeung A, Stewart JL, Lin R, Slupska MM, Miller JH (2000) The consequences of growth of a mutator strain of Escherichia coli as measured by loss of function among multiple gene targets and loss of fitness. Genetics 154:959-970
17. Gardner SN, Gressel J, Mangel M (1998) A revolving dose strategy to delay the evolution of both quantitative vs. major monogene resistances to pesticides and drugs. Intl J Pest Manag 44:161-180
18. Gressel J (2002) Molecular biology of weed control. Taylor & Francis, London
19. Gressel J, Segel LA (1978) The paucity of genetic adaptive resistance of plants to herbicides: possible biological reasons and implications. J Theor Biol 75:349-371
20. Gressel J, Segel LA (1982) Interrelating factors controlling the rate of appearance of resistance: The outlook for the future. In: Le Baron H, Gressel J (eds) Herbicide resistance in plants. Wiley, New York, pp 325-347
21. GuhaMajumdar M, Baldwin S, Sears BB (2004) Chloroplast mutations induced by 9-aminoacridine hydrochloride are independent of the plastome mutator in Oenothera. Theor Appl Genet 108:543-549
22. Hagemann R (1971) Struktur und funktion der genetischen information in den PlastidenI. Die Bedentung fon Pladtiden mutanten unddoe genetische nomenklatur extranucleauer mutationen. Biol Zentralblatt 90:409-418
23. Harfe BD, Jinks-Robertson S (2000) Mismatch repair proteins and mitotic genome stability. Mutat Res 451:151-167
24. Heap IM (1988) Resistance to herbicides in annual ryegrass (Lolium rigidum). Ph.D. Thesis, University Waite Agriculture Institute, Adelaide
25. Heap IM (2008) International survey of herbicide-resistant weeds. http://www.weedscience.org
26. Hoffman PD, Leonard JM, Lindberg GE, Bollmann SR, Hays JB (2004) Rapid accumulation of mutations during seed-to-seed propagation of mismatch-repair-defective Arabidopsis. Genes Dev 18:2676-2685
27. Horst JP, Wu TH, Marinus MG (1999) Escherichia coli mutator genes. Trends Microbiol 7:29-36
28. Hughes A (1999) Adaptive evolution of genes and genomes. Oxford University Press, Oxford
29. Kashkush K, Feldman M, Levy AA (2003) Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat. Nat Genet 33:102-106
30. Kovalchuk I, Kovalchuk O, Hohn B (2000) Genome-wide variation of the somatic mutation frequency in transgenic plants. EMBO J 19:4431-4438
31. Kovalchuk I, Kovalchuk O, Hohn B (2001) Biomonitoring the genotoxicity of environmental factors with transgenic plants. Trends Plant Sci 6:306-310
32. LeClerc JE, Li B, Payne WL, Cebula TA (1996) High mutation frequencies among Escherichia coli and Salmonella pathogens. Science 274:1208-1211
33. LeClerc JE, Paynes WL, Kupchella E, Cebula TA (1998) Detection of mutator subpopulations in Salmonella typhimurium LT2 by reversion of his alleles. Mutat Res 400:89-97
34. Lederberg J, Lederberg E (1952) Replicate plating and indirect selection of bacterial mutants. J Bact 63:399-406
35. Lee TC, Tanaka N, Lamb PW, Gilmer TM, Barrett JC (1988) Induction of gene amplification by arsenic. Science 241:79-81
36. Letouze A, Gasquez J (2003) Ebhanced activity of several herbicide-degrading enzymes: a suggested mechanism responsible for multiple resistance in blackgrass (Alopecu-rus myosuroides Huds.). Agronomie 23:601-608
37. Macia MD, Blanquer D, Togores B, Sauleda J, Perez JL, Oliver A (2005) Hypermutation is a key factor in development of multiple-antimicrobial resistance in Pseudomonas aeruginosa strains causing chronic lung infections. Antimicrobial Agents Chemo 49:3382-3386
38. Maliszewska-Tkaczyk M, Jonczyk P, Bialoskorska M, Schaaper RM, Fijalkowska IJ (2000) SOS mutator activity: unequal mutagenesis on leading and lagging strands. Proc Natl Acad Sci USA 97:12678-12683
39. Matic I, Radman M, Taddei F, Picard B, Doit C, Bingen E, Denamur E, Elion J (1997) Highly variable mutation rates in commensal and pathogenic Escherichia coli. Science 277:1833-1834
40. McClintock B (1951) Chromosome organization and genic expression. Cold Spring Harbor Symp Quant Biol 16: 13-47
41. McClintock B (1984) The significance of responses of the genome to challenge. Science 226:792-801
42. Means JC, Plewa MJ, Gentile JM (1988) Assessment of the mutagenicity of fractions from s-triazine-treated Zea mays. Mutat Res 197:325-336
43. Metzgar D, Wills C (2000) Evidence for the adaptive evolution of mutation rates. Cell 101:581-584
44. Modrich P, Lahue R (1996) Mismatch repair in replication fidelity, genetic recombination and cancer biology. Ann Rev Bioch 65:101-133
45. Molinier J, Ries G, Zipfel C, Hohn B (2006) Transgenera-tion memory of stress in plants. Nature 442:1046-1049
46. Mourad G, White J (1992) The isolation of apparently homoplastic mutants induced by a nuclear recessive gene in Arabidopsis thaliana. Theor Appl Genet 84:906-914
47. Neve P, Powles S (2005) High survival frequencies at low herbicide use rates in populations of Lolium rigidum result in rapid evolution of herbicide resistance. Heredity 95:485-492
48. Oettmeier W (1999) Herbicide resistance and supersensitiv-ity in photosystem II. Cell Mol Life Sci 55:1255-1277
49. Ottaviano E, Sari Gorla M, Mulcahy DL (1990) Pollen selection: efficiency and monitoring. Prog Clin Biol Res 344:575-588
50. Otto SP, Michalakis Y (1998) The evolution of recombination in changing environments. Trends Evol Environ 13:145-151
51. Owen MJ, Walsh MJ, Llewellyn RS, Powles SB (2007) Widespread occurrence of multiple herbicide resistance in Western Australian annual ryegrass (Lolium rigidum) populations. Aust J Agric Res 58:711-718
52. Peck JR, Waxman D (2000) Mutation and sex in a competitive world. Nature 406:399-404
53. Pedersen S, Simonsen V, Loeschke V (1987) Overlap of gametophytic and sporophytic gene expression in barley. Theor Appl Genet 75:200-206
54. Plewa MJ (1985) Mutation testing with maize. Basic Life Sci 34:323-328
55. Preston C (2003) Inheritance and linkage of metabolism-based herbicide cross-resistance in rigid ryegrass (Lolium rigidum). Weed Sci 51:4-12
56. Radman M (1999) Enzymes of evolutionary change. Nature 401:866-867
57. Ray TB (1982) The mode of action of chlorsulfuron: a new herbicide for cereals. Pestic Biochem Physiol 17:10-17
58. Redei GP (1973) Extra-chromosomal mutability determined by a nuclear gene locus in Arabidopsis. Mutat Res 18:149-162
59. Redei G P, Plurad SB (1973) Hereditary structural alterations of plastids induced by a nuclear mutator gene in Arabi-dopsis. Protoplasma 77:361-380
60. Richter J, Powles SB (1993) Pollen expression of herbicide target resistance genes in annual ryegrass (Lolium rigidum). Plant Physiol 102:1037-1041
61. Rios RD, Saione H, Robredo C, Acevedo A, Colombo N, Prina AR (2003) Isolation and molecular characterization of atrazine tolerant barley mutants. Theor Appl Genet 106:696-702
62. Rosenberg SM, Thulin C, Harris RS (1998) Transient and heritable mutators in adaptive evolution in the lab and in nature. Genetics 148:1559-1566
63. Sakamoto W, Kondo H, Murata M, Motoyoshi F (1996) Altered mitochondrial gene expression in a maternal distorted leaf mutant of Arabidopsis induced by chloroplast mutator. Plant Cell 8:1377-1390
64. Sandhu AP, Abdelnoor RV, Mackensie SA (2007) Trans-genic induction of mitochondrial rearrangements for cytoplasmic male sterility in crop plants. Proc Natl Acad Sci USA 104:1766-1770
65. Schönfeld M, Yaacoby T, Ben-Yehuda A, Rubin B, Hirsch-berg J (1987) Triazine resistance in Phalaris paradoxa physiological and molecular analyses. Z Naturforsch 42c:779-782
66. Smith BT, Walker GC (1998) Mutagenesis and more: umuDC and the Escherichia coli SOS response. Genetics 148:1599-1610
67. Stambuk S, Radman M (1998) Mechanism and control of interspecies recombination in Escherichia coli. I. Mismatch repair, methylation, recombination and replication functions. Genetics 150:533-542
68. Swoboda P, Gal S, Hohn B, Puchta H (1994) Intrachromo-somal homologous recombination in whole plants. EMBO J 13:484-489
69. Taddei F, Radman M, Maynard-Smit J, Toupance B, Gouyon PH, Godelle B (1997) Role of mutator alleles in adaptive evolution. Nature 387:700-702
70. Tanksley SD, Zamir D, Rick CM (1981) Evidence for overlap of sporophytic and gametophytic gene expression in Lycopersicon esculentum. Science 213:453-455
71. Tardif FJ, Powles SB (1994) Herbicide multiple-resistance in a Lolium rigidum biotype is endowed by multiple mechanisms: isolation of a subset with resistant acetyl-CoA carboxylase. Physiol Plant 91:488-494
72. Tenaillon O, Toupance B, le Nagard H, Taddei F, Godelle B (1999) Mutators, population size, adaptive landscape and the adaptation of asexual populations of bacteria. Genetics 152:485-493
73. Travis JMJ, Travis ER (2002) Mutator dynamics in fluctuating environments. Proc R S London B Biol Sci 269:591-597
74. Warwick SI, Stewart CN Jr (2005) Crops come from wild plants: how domestication, transgenes and linkage together shape ferality. In: Gressel J (ed) Crop ferality and volun-teerism. CRC Press, Boca Raton, FL
75. Young LW, Cross RH, Byun-McKay SA, Wilen RW, Bon-ham-Smith PC (2005) A high-and low-temperature inducible Arabidopsis thaliana HSP101 promoter located in a non-autonomous mutator-like element. Genome 48: 547-555
76. Zahrt TC, Maloy S (1997) Barriers to recombination between closely related bacteria: MutS and RecBCD inhibit recombination between Salmonella typhimurium and Salmonella typhi. Proc Natl Acad Sci USA 94:9786-9791