메뉴 건너뛰기




Volumn 4, Issue 1, 2006, Pages 0119-0127

Horizontal transfer of a plant transposon

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; EUKARYOTE; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC CODE; GENOME; HIGHER PLANT; HORIZONTAL GENE TRANSFER; MAIZE; MUTATOR GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT; PLANT GENETICS; RICE; SETARIA; TRANSPOSON; AMINO ACID SEQUENCE; GENETICS; INTRON; MILLET; MOLECULAR GENETICS; SEQUENCE ALIGNMENT;

EID: 31144442173     PISSN: 15457885     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.0040005     Document Type: Article
Times cited : (136)

References (48)
  • 1
  • 2
    • 0033603539 scopus 로고    scopus 로고
    • Phylogenetic classification and the universal tree
    • Doolittle WF (1999) Phylogenetic classification and the universal tree. Science 284: 2124-2129.
    • (1999) Science , vol.284 , pp. 2124-2129
    • Doolittle, W.F.1
  • 4
    • 0033804947 scopus 로고    scopus 로고
    • Horizontal transfer and selection in the evolution of P elements
    • Silva JC, Kidwell MG (2000) Horizontal transfer and selection in the evolution of P elements. Mol Biol Evol 17: 1542-1557.
    • (2000) Mol Biol Evol , vol.17 , pp. 1542-1557
    • Silva, J.C.1    Kidwell, M.G.2
  • 5
    • 0001209423 scopus 로고    scopus 로고
    • The mariner transposons of animals: Horizontally jumping genes
    • Syvanen M, Kado CI, editors. New York: Chapman and Hill
    • Robertson HM, Soto-Adames FN, Walden KO, Avancini RMP, Lampe DJ (1998) The mariner transposons of animals: Horizontally jumping genes. In: Syvanen M, Kado CI, editors. Horizontal gene transfer. New York: Chapman and Hill. pp 268-284.
    • (1998) Horizontal Gene Transfer , pp. 268-284
    • Robertson, H.M.1    Soto-Adames, F.N.2    Walden, K.O.3    Avancini, R.M.P.4    Lampe, D.J.5
  • 6
    • 0037819441 scopus 로고    scopus 로고
    • Widespread horizontal transfer of mitochondrial genes in flowering plants
    • Bergthorsson U, Adams KL, Thomason B, Palmer JD (2003) Widespread horizontal transfer of mitochondrial genes in flowering plants. Nature 424: 197-201.
    • (2003) Nature , vol.424 , pp. 197-201
    • Bergthorsson, U.1    Adams, K.L.2    Thomason, B.3    Palmer, J.D.4
  • 7
    • 11144228905 scopus 로고    scopus 로고
    • Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella
    • U S A
    • Bergthorsson U, Richardson AO, Young GJ, Goertzen LR, Palmer JD (2004) Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella. Proc Natl Acad Sci U S A 101: 17747-17752.
    • (2004) Proc Natl Acad Sci , vol.101 , pp. 17747-17752
    • Bergthorsson, U.1    Richardson, A.O.2    Young, G.J.3    Goertzen, L.R.4    Palmer, J.D.5
  • 8
    • 0032878830 scopus 로고    scopus 로고
    • Multiple acquisitions via horizontal transfer of a group I intron in the mitochondrial cox1 gene during evolution of the Araceae family
    • Cho Y, Palmer J (1999) Multiple acquisitions via horizontal transfer of a group I intron in the mitochondrial cox1 gene during evolution of the Araceae family. Mol Biol Evol 16: 1155-1165.
    • (1999) Mol Biol Evol , vol.16 , pp. 1155-1165
    • Cho, Y.1    Palmer, J.2
  • 9
    • 0035035214 scopus 로고    scopus 로고
    • The hAT family: A versatile transposon group common to plants, fungi, animals, and man
    • Kempken F, Windhofer F (2001) The hAT family: A versatile transposon group common to plants, fungi, animals, and man. Chromosoma 110: 1-9.
    • (2001) Chromosoma , vol.110 , pp. 1-9
    • Kempken, F.1    Windhofer, F.2
  • 10
    • 0034913514 scopus 로고    scopus 로고
    • Structure and evolution of the hAT transposon superfamily
    • Rubin E, Lithwick G, Levy AA (2001) Structure and evolution of the hAT transposon superfamily. Genetics 158: 949-957.
    • (2001) Genetics , vol.158 , pp. 949-957
    • Rubin, E.1    Lithwick, G.2    Levy, A.A.3
  • 11
    • 0037039351 scopus 로고    scopus 로고
    • Mariner-like transposases are widespread and diverse in flowering plants
    • U S A
    • Feschotte C, Wessler SR (2002) Mariner-like transposases are widespread and diverse in flowering plants. Proc Natl Acad Sci U S A 99: 280-285.
    • (2002) Proc Natl Acad Sci , vol.99 , pp. 280-285
    • Feschotte, C.1    Wessler, S.R.2
  • 12
    • 0038363536 scopus 로고    scopus 로고
    • CACTA transposons in Triticeae. A diverse family of high-copy repetitive elements
    • Wicker T, Guyot R, Yahiaoui N, Keller B (2003) CACTA transposons in Triticeae. A diverse family of high-copy repetitive elements. Plant Physiol 132: 52-63.
    • (2003) Plant Physiol , vol.132 , pp. 52-63
    • Wicker, T.1    Guyot, R.2    Yahiaoui, N.3    Keller, B.4
  • 13
    • 0033026625 scopus 로고    scopus 로고
    • Evolutionary dynamics of Ty1-copia group retrotransposons in grass shown by reverse transcriptase domain analysis
    • Matsuoka Y, Tsunewaki K (1999) Evolutionary dynamics of Ty1-copia group retrotransposons in grass shown by reverse transcriptase domain analysis. Mol Biol Evol 16: 208-217.
    • (1999) Mol Biol Evol , vol.16 , pp. 208-217
    • Matsuoka, Y.1    Tsunewaki, K.2
  • 14
    • 0031468628 scopus 로고    scopus 로고
    • Modern thoughts on an ancyent marinere: Function, evolution, regulation
    • Hartl DL, Lohe AR, Lozovskaya ER (1997) Modern thoughts on an ancyent marinere: Function, evolution, regulation. Annu Rev Genet 31: 337-358.
    • (1997) Annu Rev Genet , vol.31 , pp. 337-358
    • Hartl, D.L.1    Lohe, A.R.2    Lozovskaya, E.R.3
  • 15
    • 0036833565 scopus 로고    scopus 로고
    • Mutator transposons
    • Lisch D (2002) Mutator transposons. Trends Plant Sci 7: 498-504.
    • (2002) Trends Plant Sci , vol.7 , pp. 498-504
    • Lisch, D.1
  • 16
    • 0034536308 scopus 로고    scopus 로고
    • Mutator-like elements in Arabidopsis thaliana: Structure, diversity and evolution
    • Yu Z, Wright SI, Bureau TE (2000) Mutator-like elements in Arabidopsis thaliana: Structure, diversity and evolution. Genetics 156: 2019-2031.
    • (2000) Genetics , vol.156 , pp. 2019-2031
    • Yu, Z.1    Wright, S.I.2    Bureau, T.E.3
  • 17
    • 0035107159 scopus 로고    scopus 로고
    • Mutator transposase is widespread in the grasses
    • Rockville
    • Lisch DR, Freeling M, Langham RJ, Choy MY (2001) Mutator transposase is widespread in the grasses. Plant Physiol (Rockville) 125: 1293-1303.
    • (2001) Plant Physiol , vol.125 , pp. 1293-1303
    • Lisch, D.R.1    Freeling, M.2    Langham, R.J.3    Choy, M.Y.4
  • 18
    • 0035739802 scopus 로고    scopus 로고
    • Survey of transposable elements in sugarcane expressed sequence tags (ESTs)
    • Rossi M, Araujo PG, Van Sluys MA (2001) Survey of transposable elements in sugarcane expressed sequence tags (ESTs). Genet Mol Biol 24: 147-154.
    • (2001) Genet Mol Biol , vol.24 , pp. 147-154
    • Rossi, M.1    Araujo, P.G.2    Van Sluys, M.A.3
  • 19
    • 0033854088 scopus 로고    scopus 로고
    • Rice transposable elements: A survey of 73,000 sequence-tagged-connectors
    • Mao L, Wood TC, Yu YS, Budiman MA, Tomkins J, et al. (2000) Rice transposable elements: A survey of 73,000 sequence-tagged-connectors. Genome Res 10: 982-990.
    • (2000) Genome Res , vol.10 , pp. 982-990
    • Mao, L.1    Wood, T.C.2    Yu, Y.S.3    Budiman, M.A.4    Tomkins, J.5
  • 20
    • 0035142211 scopus 로고    scopus 로고
    • Survey of transposable elements from rice genomic sequences
    • Turcotte K, Srinivasan S, Bureau T (2001) Survey of transposable elements from rice genomic sequences. Plant J 22: 169-179.
    • (2001) Plant J , vol.22 , pp. 169-179
    • Turcotte, K.1    Srinivasan, S.2    Bureau, T.3
  • 21
    • 0002408597 scopus 로고
    • Coevolution of grasses and herbivores
    • Stebbins GL (1981) Coevolution of grasses and herbivores. Ann Mo Bot Gard 68: 75-86.
    • (1981) Ann Mo Bot Gard , vol.68 , pp. 75-86
    • Stebbins, G.L.1
  • 22
    • 0024712231 scopus 로고
    • Date of the monocot dicot divergence estimated from chloroplast DNA-sequence data
    • U S A
    • Wolfe KH, Gouy ML, Yang YW, Sharp PM, Li WH (1989) Date of the monocot dicot divergence estimated from chloroplast DNA-sequence data. Proc Natl Acad Sci U S A 86: 6201-6205.
    • (1989) Proc Natl Acad Sci , vol.86 , pp. 6201-6205
    • Wolfe, K.H.1    Gouy, M.L.2    Yang, Y.W.3    Sharp, P.M.4    Li, W.H.5
  • 23
    • 0035103949 scopus 로고    scopus 로고
    • Evolutionary history of the grasses
    • Kellogg EA (2001) Evolutionary history of the grasses. Plant Physiol 125: 1198-1205.
    • (2001) Plant Physiol , vol.125 , pp. 1198-1205
    • Kellogg, E.A.1
  • 24
    • 0035282119 scopus 로고    scopus 로고
    • Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene decrease in DNA methylation (DDM1)
    • Singer T, Yordan C, Martienssen R (2001) Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene decrease in DNA methylation (DDM1). Genes Dev 15: 591-602.
    • (2001) Genes Dev , vol.15 , pp. 591-602
    • Singer, T.1    Yordan, C.2    Martienssen, R.3
  • 26
    • 13144251179 scopus 로고    scopus 로고
    • Plant conserved non-coding sequences and paralogue evolution
    • Lockton S, Gaut BS (2005) Plant conserved non-coding sequences and paralogue evolution. Trends Genet 21: 60-65.
    • (2005) Trends Genet , vol.21 , pp. 60-65
    • Lockton, S.1    Gaut, B.S.2
  • 27
    • 0036836792 scopus 로고    scopus 로고
    • Subcellular localization of MURA and MURB proteins encoded by the maize MuDR transposon
    • Ono A, Kim SH, Walbot V (2002) Subcellular localization of MURA and MURB proteins encoded by the maize MuDR transposon. Plant Mol Biol 50: 599-611.
    • (2002) Plant Mol Biol , vol.50 , pp. 599-611
    • Ono, A.1    Kim, S.H.2    Walbot, V.3
  • 28
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M, Gojobori T (1986) Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 3: 418-426.
    • (1986) Mol Biol Evol , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 29
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • Wright F (1990) The 'effective number of codons' used in a gene. Gene 87: 23-29.
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 31
    • 23944471581 scopus 로고    scopus 로고
    • Molecular phylogeny of Oryzeae (Poaceaf) based on DNA sequences from chloroplast, mitochondrial, and nuclear genomes
    • Guo YL, Ge S (2005) Molecular phylogeny of Oryzeae (Poaceaf) based on DNA sequences from chloroplast, mitochondrial, and nuclear genomes. Am J Bot 92: 1548-1558.
    • (2005) Am J Bot , vol.92 , pp. 1548-1558
    • Guo, Y.L.1    Ge, S.2
  • 32
    • 0001662231 scopus 로고    scopus 로고
    • A molecular phylogeny of the grass subfamily Panicoideae (Poaceae) shows multiple origins of C 4 photosynthesis
    • Giussani LM, Cota-Sánchez JH, Zuloaga FO, Kellogg EA (2001) A molecular phylogeny of the grass subfamily Panicoideae (Poaceae) shows multiple origins of C 4 photosynthesis. Am J Bot 88: 1993-2012.
    • (2001) Am J Bot , vol.88 , pp. 1993-2012
    • Giussani, L.M.1    Cota-Sánchez, J.H.2    Zuloaga, F.O.3    Kellogg, E.A.4
  • 33
    • 0037212952 scopus 로고    scopus 로고
    • Evolution of switchgrass (Panicum virgatum L.) based on sequences of the nuclear gene encoding plastid acetyl-CoA carboxylase
    • Huang SX, Su XJ, Haselkorn R, Gornicki P (2003) Evolution of switchgrass (Panicum virgatum L.) based on sequences of the nuclear gene encoding plastid acetyl-CoA carboxylase. Plant Sci 164: 43-49.
    • (2003) Plant Sci , vol.164 , pp. 43-49
    • Huang, S.X.1    Su, X.J.2    Haselkorn, R.3    Gornicki, P.4
  • 34
    • 0033869323 scopus 로고    scopus 로고
    • Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions
    • Bennetzen JL (2000) Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions. Plant Cell 12: 1021-1029.
    • (2000) Plant Cell , vol.12 , pp. 1021-1029
    • Bennetzen, J.L.1
  • 35
    • 0000172854 scopus 로고
    • Genera graminum
    • Coode MJE, editor. London: Her Majesty's Stationary Office
    • Clayton WD, Renvoize SA (1986) Genera graminum. In: Coode MJE, editor. Grasses of the world. London: Her Majesty's Stationary Office. 389 p.
    • (1986) Grasses of the World
    • Clayton, W.D.1    Renvoize, S.A.2
  • 36
    • 0031239092 scopus 로고    scopus 로고
    • Origin, dispersal, cultivation and variation of rice
    • Khush GS (1997) Origin, dispersal, cultivation and variation of rice. Plant Mol Biol 35: 25-34.
    • (1997) Plant Mol Biol , vol.35 , pp. 25-34
    • Khush, G.S.1
  • 37
    • 0005647613 scopus 로고
    • Taxonomy of Setaria (Gramineae) in North America
    • Rominger JM (1962) Taxonomy of Setaria (Gramineae) in North America. Biol Monogr 29: 1-118.
    • (1962) Biol Monogr , vol.29 , pp. 1-118
    • Rominger, J.M.1
  • 39
    • 0002946285 scopus 로고
    • Cytological and genetical studies of the interspecific cross of the cultivated foxtail millet, Setaria italica and the green foxtail Setaria viridis
    • Li HW, Li CH, Pao WK (1945) Cytological and genetical studies of the interspecific cross of the cultivated foxtail millet, Setaria italica and the green foxtail Setaria viridis. J Am Soc Agronomy 37: 32-54.
    • (1945) J Am Soc Agronomy , vol.37 , pp. 32-54
    • Li, H.W.1    Li, C.H.2    Pao, W.K.3
  • 40
    • 0031687533 scopus 로고    scopus 로고
    • Horizontal gene transfer from transgenic plants to terrestrial bacteria - A rare event?
    • Nielsen KM, Bones AM, Smalla K, van Elsas JD (1998) Horizontal gene transfer from transgenic plants to terrestrial bacteria - A rare event? FEMS Microbiol Rev 22: 79-103.
    • (1998) FEMS Microbiol Rev , vol.22 , pp. 79-103
    • Nielsen, K.M.1    Bones, A.M.2    Smalla, K.3    Van Elsas, J.D.4
  • 41
    • 0042862818 scopus 로고    scopus 로고
    • Homology-dependent DNA transfer from plants to a soil bacterium under laboratory conditions: Implications in evolution and horizontal gene transfer
    • Tepfer D, Garcia-Gonzales R, Mansouri H, Seruga M, Message B, et al. (2003) Homology-dependent DNA transfer from plants to a soil bacterium under laboratory conditions: Implications in evolution and horizontal gene transfer. Transgenic Res 12: 425-437.
    • (2003) Transgenic Res , vol.12 , pp. 425-437
    • Tepfer, D.1    Garcia-Gonzales, R.2    Mansouri, H.3    Seruga, M.4    Message, B.5
  • 42
    • 0037967301 scopus 로고    scopus 로고
    • Current knowledge of gene flow in plants: Implications for transgene flow
    • Ellstrand NC (2003) Current knowledge of gene flow in plants: Implications for transgene flow. Phil Trans R Soc Lond Ser B-Biol Sci 358: 1163-1170.
    • (2003) Phil Trans R Soc Lond Ser B-Biol Sci , vol.358 , pp. 1163-1170
    • Ellstrand, N.C.1
  • 43
    • 0024009771 scopus 로고
    • Molecular characteristics of diverse populations are consistent with the hypothesis of a recent invasion of Drosophila melanogaster by mobile P elements
    • Anxolabehere D, Kidwell M, Periquet G (1988) Molecular characteristics of diverse populations are consistent with the hypothesis of a recent invasion of Drosophila melanogaster by mobile P elements. Mol Biol Evol 5: 252-269.
    • (1988) Mol Biol Evol , vol.5 , pp. 252-269
    • Anxolabehere, D.1    Kidwell, M.2    Periquet, G.3
  • 44
    • 0042007590 scopus 로고    scopus 로고
    • Gene silencing-based disease resistance
    • Wassenegger M (2002) Gene silencing-based disease resistance. Transgenic Res 11: 639-653.
    • (2002) Transgenic Res , vol.11 , pp. 639-653
    • Wassenegger, M.1
  • 46
    • 0027968068 scopus 로고
    • Clustal-W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) Clustal-W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 47
    • 0034129194 scopus 로고    scopus 로고
    • Optimal spliced alignment of homologous cDNA to a genomic DNA template
    • Usuka J, Zhu W, Brendel V (2000) Optimal spliced alignment of homologous cDNA to a genomic DNA template. Bioinformatics 16: 203-211.
    • (2000) Bioinformatics , vol.16 , pp. 203-211
    • Usuka, J.1    Zhu, W.2    Brendel, V.3
  • 48
    • 0002222776 scopus 로고    scopus 로고
    • HIV signature and sequence variation analysis
    • Rodrigo AG Jr, Learn GH, editors. Dordrecht, the Netherlands: Kluwer Academic Publishers
    • Korber B (2002) HIV signature and sequence variation analysis. In: Rodrigo AG Jr, Learn GH, editors. Computational analysis of HIV molecular sequences. Dordrecht, the Netherlands: Kluwer Academic Publishers. pp 55-74.
    • (2002) Computational Analysis of HIV Molecular Sequences , pp. 55-74
    • Korber, B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.