-
1
-
-
84875182695
-
Metabolic profiling reveals coordinated switches in primary carbohydrate metabolism in grape berry (Vitis vinifera L.), a non-climacteric fleshy fruit
-
10.1093/jxb/ers396, 3598422, 23364938
-
Dai ZW, Leon C, Feil R, Lunn JE, Delrot S, Gomes E. Metabolic profiling reveals coordinated switches in primary carbohydrate metabolism in grape berry (Vitis vinifera L.), a non-climacteric fleshy fruit. J Exp Bot 2013, 64:1345-1355. 10.1093/jxb/ers396, 3598422, 23364938.
-
(2013)
J Exp Bot
, vol.64
, pp. 1345-1355
-
-
Dai, Z.W.1
Leon, C.2
Feil, R.3
Lunn, J.E.4
Delrot, S.5
Gomes, E.6
-
2
-
-
38849193158
-
Biochemical changes throughout Grape Berry development and fruit and wine quality
-
Conde C, Silva P, Fontes N, Dias ACP, Tavares RM, Sousa MJ, Agasse A, Delrot S, Gerós H. Biochemical changes throughout Grape Berry development and fruit and wine quality. Food 2007, 1:1-22.
-
(2007)
Food
, vol.1
, pp. 1-22
-
-
Conde, C.1
Silva, P.2
Fontes, N.3
Dias, A.C.P.4
Tavares, R.M.5
Sousa, M.J.6
Agasse, A.7
Delrot, S.8
Gerós, H.9
-
3
-
-
84863089084
-
Berry flesh and skin ripening features in Vitis vinifera as assessed by transcriptional profiling
-
10.1371/journal.pone.0039547, 3386993, 22768087
-
Lijavetzky D, Carbonell-Bejerano P, Grimplet J, Bravo G, Flores P, Fenoll J, Hellin P, Oliveros JC, Martinez-Zapater JM. Berry flesh and skin ripening features in Vitis vinifera as assessed by transcriptional profiling. PLoS One 2012, 7:e39547. 10.1371/journal.pone.0039547, 3386993, 22768087.
-
(2012)
PLoS One
, vol.7
-
-
Lijavetzky, D.1
Carbonell-Bejerano, P.2
Grimplet, J.3
Bravo, G.4
Flores, P.5
Fenoll, J.6
Hellin, P.7
Oliveros, J.C.8
Martinez-Zapater, J.M.9
-
4
-
-
84884191566
-
Berry phenolics of grapevine under challenging environments
-
10.3390/ijms140918711, 3794804, 24030720
-
Teixeira A, Eiras-Dias J, Castellarin SD, Geros H. Berry phenolics of grapevine under challenging environments. Int J Mol Sci 2013, 14:18711-18739. 10.3390/ijms140918711, 3794804, 24030720.
-
(2013)
Int J Mol Sci
, vol.14
, pp. 18711-18739
-
-
Teixeira, A.1
Eiras-Dias, J.2
Castellarin, S.D.3
Geros, H.4
-
5
-
-
84870172699
-
Fruit aromas in mature fleshy fruits as signals of readiness for predation and seed dispersal
-
10.1111/j.1469-8137.2012.04382.x, 23127167
-
Rodriguez A, Alquezar B, Pena L. Fruit aromas in mature fleshy fruits as signals of readiness for predation and seed dispersal. New Phytol 2013, 197:36-48. 10.1111/j.1469-8137.2012.04382.x, 23127167.
-
(2013)
New Phytol
, vol.197
, pp. 36-48
-
-
Rodriguez, A.1
Alquezar, B.2
Pena, L.3
-
6
-
-
84888358206
-
Volatile organic compounds characterized from grapevine (Vitis vinifera L. cv. Malbec) berries increase at pre-harvest and in response to UV-B radiation
-
Gil M, Bottini R, Berli F, Pontin M, Silva MF, Piccoli P. Volatile organic compounds characterized from grapevine (Vitis vinifera L. cv. Malbec) berries increase at pre-harvest and in response to UV-B radiation. Phytochemistry 2013, 96:148-157.
-
(2013)
Phytochemistry
, vol.96
, pp. 148-157
-
-
Gil, M.1
Bottini, R.2
Berli, F.3
Pontin, M.4
Silva, M.F.5
Piccoli, P.6
-
7
-
-
84887371035
-
Hormonal Control of Grape Berry Ripening
-
Netherlands: Springer, Roubelakis-Angelakis KA
-
Davies C, Böttcher C. Hormonal Control of Grape Berry Ripening. Grapevine Molecular Physiology & Biotechnology 2009, 229-261. Netherlands: Springer, Roubelakis-Angelakis KA.
-
(2009)
Grapevine Molecular Physiology & Biotechnology
, pp. 229-261
-
-
Davies, C.1
Böttcher, C.2
-
8
-
-
0003035323
-
Effect of temperature on the composition of grapes grown under field and controlled conditions
-
Kliewer WM. Effect of temperature on the composition of grapes grown under field and controlled conditions. Proc Am Soc Horti Cult Sci 1968, 93:797-806.
-
(1968)
Proc Am Soc Horti Cult Sci
, vol.93
, pp. 797-806
-
-
Kliewer, W.M.1
-
9
-
-
51949109662
-
Berry temperature and solar radiation alter acylation, proportion, and concentration of anthocyanin in Merlot grapes
-
Tarara JM, Lee J, Spayd SE, Scagel CF. Berry temperature and solar radiation alter acylation, proportion, and concentration of anthocyanin in Merlot grapes. Am J Enol Vitic 2008, 59:235-247.
-
(2008)
Am J Enol Vitic
, vol.59
, pp. 235-247
-
-
Tarara, J.M.1
Lee, J.2
Spayd, S.E.3
Scagel, C.F.4
-
10
-
-
44349105494
-
Phenolic composition in grape (Vitis vinifera L. cv. Malbec) ripened with different solar UV-B radiation levels by capillary zone electrophoresis
-
10.1021/jf073421+, 18412357
-
Berli F, D'Angelo J, Cavagnaro B, Bottini R, Wuilloud R, Silva MF. Phenolic composition in grape (Vitis vinifera L. cv. Malbec) ripened with different solar UV-B radiation levels by capillary zone electrophoresis. J Agric Food Chem 2008, 56:2892-2898. 10.1021/jf073421+, 18412357.
-
(2008)
J Agric Food Chem
, vol.56
, pp. 2892-2898
-
-
Berli, F.1
D'Angelo, J.2
Cavagnaro, B.3
Bottini, R.4
Wuilloud, R.5
Silva, M.F.6
-
11
-
-
0036035610
-
Separation of sunlight and temperature effects on the composition of Vitis vinifera cv. Merlot Berries
-
Spayd SE, Tarara JM, Mee DL, Ferguson JC. Separation of sunlight and temperature effects on the composition of Vitis vinifera cv. Merlot Berries. Am J Enol Vitic 2002, 53:171-182.
-
(2002)
Am J Enol Vitic
, vol.53
, pp. 171-182
-
-
Spayd, S.E.1
Tarara, J.M.2
Mee, D.L.3
Ferguson, J.C.4
-
12
-
-
77955794016
-
Effects of sunlight exposure on berry and wine monoterpenes and sensory characteristics of Traminette
-
Skinkis PA, Bordelon BP, Butz EM. Effects of sunlight exposure on berry and wine monoterpenes and sensory characteristics of Traminette. Am J Enol Vitic 2010, 61:147-156.
-
(2010)
Am J Enol Vitic
, vol.61
, pp. 147-156
-
-
Skinkis, P.A.1
Bordelon, B.P.2
Butz, E.M.3
-
13
-
-
33750997904
-
Effect of shading on accumulation of flavonoid compounds in (Vitis vinifera L.) pinot noir fruit and extraction in a model system
-
10.1021/jf0616560, 17061828
-
Cortell JM, Kennedy JA. Effect of shading on accumulation of flavonoid compounds in (Vitis vinifera L.) pinot noir fruit and extraction in a model system. J Agric Food Chem 2006, 54:8510-8520. 10.1021/jf0616560, 17061828.
-
(2006)
J Agric Food Chem
, vol.54
, pp. 8510-8520
-
-
Cortell, J.M.1
Kennedy, J.A.2
-
14
-
-
84858064884
-
Diurnal temperature range compression Hastens Berry development and modifies flavonoid partitioning in Grapes
-
Cohen SD, Tarara JM, Kennedy JA. Diurnal temperature range compression Hastens Berry development and modifies flavonoid partitioning in Grapes. Am J Enol Vitic 2011, 63:112-120.
-
(2011)
Am J Enol Vitic
, vol.63
, pp. 112-120
-
-
Cohen, S.D.1
Tarara, J.M.2
Kennedy, J.A.3
-
15
-
-
0002047519
-
Effect of Controlled Day and Night Temperatures on Grape Coloration
-
Kliewer WM, Torres RE. Effect of Controlled Day and Night Temperatures on Grape Coloration. Am J Enol Vitic 1972, 23:71-77.
-
(1972)
Am J Enol Vitic
, vol.23
, pp. 71-77
-
-
Kliewer, W.M.1
Torres, R.E.2
-
16
-
-
84870578991
-
Light emitting diode irradiation at night accelerates anthocyanin accumulation in grape skin
-
Azuma A, Ito A, Moriguchi T, Yakushiji H, Kobayashi S. Light emitting diode irradiation at night accelerates anthocyanin accumulation in grape skin. Acta Horticult 2012, 956:341-348.
-
(2012)
Acta Horticult
, vol.956
, pp. 341-348
-
-
Azuma, A.1
Ito, A.2
Moriguchi, T.3
Yakushiji, H.4
Kobayashi, S.5
-
17
-
-
84880202714
-
Thermotolerance responses in ripening berries of Vitis vinifera L. cv Muscat Hamburg
-
10.1093/pcp/pct071, 23659918
-
Carbonell-Bejerano P, Santa Maria E, Torres-Perez R, Royo C, Lijavetzky D, Bravo G, Aguirreolea J, Sanchez-Diaz M, Antolin MC, Martinez-Zapater JM. Thermotolerance responses in ripening berries of Vitis vinifera L. cv Muscat Hamburg. Plant Cell Physiol 2013, 54:1200-1216. 10.1093/pcp/pct071, 23659918.
-
(2013)
Plant Cell Physiol
, vol.54
, pp. 1200-1216
-
-
Carbonell-Bejerano, P.1
Santa Maria, E.2
Torres-Perez, R.3
Royo, C.4
Lijavetzky, D.5
Bravo, G.6
Aguirreolea, J.7
Sanchez-Diaz, M.8
Antolin, M.C.9
Martinez-Zapater, J.M.10
-
18
-
-
34547699091
-
Loss of anthocyanins in red-wine grape under high temperature
-
10.1093/jxb/erm055, 17452755
-
Mori K, Goto-Yamamoto N, Kitayama M, Hashizume K. Loss of anthocyanins in red-wine grape under high temperature. J Exp Bot 2007, 58:1935-1945. 10.1093/jxb/erm055, 17452755.
-
(2007)
J Exp Bot
, vol.58
, pp. 1935-1945
-
-
Mori, K.1
Goto-Yamamoto, N.2
Kitayama, M.3
Hashizume, K.4
-
19
-
-
62349134548
-
Post-veraison sunlight exposure induces MYB-mediated transcriptional regulation of anthocyanin and flavonol synthesis in berry skins of Vitis vinifera
-
10.1093/jxb/ern336, 2652055, 19129169
-
Matus JT, Loyola R, Vega A, Pena-Neira A, Bordeu E, Arce-Johnson P, Alcalde JA. Post-veraison sunlight exposure induces MYB-mediated transcriptional regulation of anthocyanin and flavonol synthesis in berry skins of Vitis vinifera. J Exp Bot 2009, 60:853-867. 10.1093/jxb/ern336, 2652055, 19129169.
-
(2009)
J Exp Bot
, vol.60
, pp. 853-867
-
-
Matus, J.T.1
Loyola, R.2
Vega, A.3
Pena-Neira, A.4
Bordeu, E.5
Arce-Johnson, P.6
Alcalde, J.A.7
-
20
-
-
84866940510
-
Flavonoid biosynthesis-related genes in grape skin are differentially regulated by temperature and light conditions
-
10.1007/s00425-012-1650-x, 22569920
-
Azuma A, Yakushiji H, Koshita Y, Kobayashi S. Flavonoid biosynthesis-related genes in grape skin are differentially regulated by temperature and light conditions. Planta 2012, 236:1067-1080. 10.1007/s00425-012-1650-x, 22569920.
-
(2012)
Planta
, vol.236
, pp. 1067-1080
-
-
Azuma, A.1
Yakushiji, H.2
Koshita, Y.3
Kobayashi, S.4
-
21
-
-
84860652494
-
Light quality affects flavonoid biosynthesis in young berries of Cabernet Sauvignon grape
-
Koyama K, Ikeda H, Poudel PR, Goto-Yamamoto N. Light quality affects flavonoid biosynthesis in young berries of Cabernet Sauvignon grape. Phytochemistry 2012, 78:54-64.
-
(2012)
Phytochemistry
, vol.78
, pp. 54-64
-
-
Koyama, K.1
Ikeda, H.2
Poudel, P.R.3
Goto-Yamamoto, N.4
-
22
-
-
66449087281
-
The circadian system in higher plants
-
10.1146/annurev.arplant.043008.092054, 19575587
-
Harmer SL. The circadian system in higher plants. Annu Rev Plant Biol 2009, 60:357-377. 10.1146/annurev.arplant.043008.092054, 19575587.
-
(2009)
Annu Rev Plant Biol
, vol.60
, pp. 357-377
-
-
Harmer, S.L.1
-
23
-
-
79958268862
-
Global profiling of rice and poplar transcriptomes highlights key conserved circadian-controlled pathways and cis-regulatory modules
-
10.1371/journal.pone.0016907, 3111414, 21694767
-
Filichkin SA, Breton G, Priest HD, Dharmawardhana P, Jaiswal P, Fox SE, Michael TP, Chory J, Kay SA, Mockler TC. Global profiling of rice and poplar transcriptomes highlights key conserved circadian-controlled pathways and cis-regulatory modules. PLoS One 2011, 6:e16907. 10.1371/journal.pone.0016907, 3111414, 21694767.
-
(2011)
PLoS One
, vol.6
-
-
Filichkin, S.A.1
Breton, G.2
Priest, H.D.3
Dharmawardhana, P.4
Jaiswal, P.5
Fox, S.E.6
Michael, T.P.7
Chory, J.8
Kay, S.A.9
Mockler, T.C.10
-
24
-
-
84859508042
-
Mapping the core of the Arabidopsis circadian clock defines the network structure of the oscillator
-
10.1126/science.1219075, 22403178
-
Huang W, Perez-Garcia P, Pokhilko A, Millar AJ, Antoshechkin I, Riechmann JL, Mas P. Mapping the core of the Arabidopsis circadian clock defines the network structure of the oscillator. Science 2012, 336:75-79. 10.1126/science.1219075, 22403178.
-
(2012)
Science
, vol.336
, pp. 75-79
-
-
Huang, W.1
Perez-Garcia, P.2
Pokhilko, A.3
Millar, A.J.4
Antoshechkin, I.5
Riechmann, J.L.6
Mas, P.7
-
25
-
-
0037136548
-
Molecular basis of seasonal time measurement in Arabidopsis
-
10.1038/nature00996, 12239570
-
Yanovsky MJ, Kay SA. Molecular basis of seasonal time measurement in Arabidopsis. Nature 2002, 419:308-312. 10.1038/nature00996, 12239570.
-
(2002)
Nature
, vol.419
, pp. 308-312
-
-
Yanovsky, M.J.1
Kay, S.A.2
-
26
-
-
78650894699
-
The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation
-
10.1105/tpc.110.079087, 3015110, 21098730
-
Salome PA, Weigel D, McClung CR. The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation. Plant Cell 2010, 22:3650-3661. 10.1105/tpc.110.079087, 3015110, 21098730.
-
(2010)
Plant Cell
, vol.22
, pp. 3650-3661
-
-
Salome, P.A.1
Weigel, D.2
McClung, C.R.3
-
27
-
-
79955900313
-
Timing in plants-a rhythmic arrangement
-
10.1016/j.febslet.2011.03.051, 21453701
-
McWatters HG, Devlin PF. Timing in plants-a rhythmic arrangement. FEBS Lett 2011, 585:1474-1484. 10.1016/j.febslet.2011.03.051, 21453701.
-
(2011)
FEBS Lett
, vol.585
, pp. 1474-1484
-
-
McWatters, H.G.1
Devlin, P.F.2
-
28
-
-
33846601810
-
Modulation of environmental responses of plants by circadian clocks
-
10.1111/j.1365-3040.2006.01627.x, 17263778
-
Hotta CT, Gardner MJ, Hubbard KE, Baek SJ, Dalchau N, Suhita D, Dodd AN, Webb AA. Modulation of environmental responses of plants by circadian clocks. Plant Cell Environ 2007, 30:333-349. 10.1111/j.1365-3040.2006.01627.x, 17263778.
-
(2007)
Plant Cell Environ
, vol.30
, pp. 333-349
-
-
Hotta, C.T.1
Gardner, M.J.2
Hubbard, K.E.3
Baek, S.J.4
Dalchau, N.5
Suhita, D.6
Dodd, A.N.7
Webb, A.A.8
-
29
-
-
83055194388
-
Plant cell responses to cold are all about timing
-
10.1016/j.pbi.2011.08.005, 21937261
-
Eriksson ME, Webb AA. Plant cell responses to cold are all about timing. Curr Opin Plant Biol 2011, 14:731-737. 10.1016/j.pbi.2011.08.005, 21937261.
-
(2011)
Curr Opin Plant Biol
, vol.14
, pp. 731-737
-
-
Eriksson, M.E.1
Webb, A.A.2
-
30
-
-
0023490094
-
Diurnal mRNA fluctuations of nuclear and plastid genes in developing tomato fruits
-
553826, 3428266
-
Piechulla B, Gruissem W. Diurnal mRNA fluctuations of nuclear and plastid genes in developing tomato fruits. EMBO J 1987, 6:3593-3599. 553826, 3428266.
-
(1987)
EMBO J
, vol.6
, pp. 3593-3599
-
-
Piechulla, B.1
Gruissem, W.2
-
31
-
-
68149162964
-
Characterisation and classification of Spanish Verdejo young white wines by volatile and sensory analysis with chemometric tools
-
Rodríguez-Nogales JM, Fernández-Fernández E, Vila-Crespo J. Characterisation and classification of Spanish Verdejo young white wines by volatile and sensory analysis with chemometric tools. J Sci Food Agric 2009, 89:1927-1935.
-
(2009)
J Sci Food Agric
, vol.89
, pp. 1927-1935
-
-
Rodríguez-Nogales, J.M.1
Fernández-Fernández, E.2
Vila-Crespo, J.3
-
32
-
-
47349110843
-
Aroma properties of young Spanish monovarietal white wines: a study using sorting task, list of terms and frequency of citation
-
Campo E, Do BV, Ferreira V, Valentin D. Aroma properties of young Spanish monovarietal white wines: a study using sorting task, list of terms and frequency of citation. Aust J Grape Wine Res 2008, 14:104-115.
-
(2008)
Aust J Grape Wine Res
, vol.14
, pp. 104-115
-
-
Campo, E.1
Do, B.V.2
Ferreira, V.3
Valentin, D.4
-
33
-
-
60249087590
-
Ectopic expression of VlmybA1 in grapevine activates a narrow set of genes involved in anthocyanin synthesis and transport
-
10.1007/s11103-008-9446-x, 19096760
-
Cutanda-Perez MC, Ageorges A, Gomez C, Vialet S, Terrier N, Romieu C, Torregrosa L. Ectopic expression of VlmybA1 in grapevine activates a narrow set of genes involved in anthocyanin synthesis and transport. Plant Mol Biol 2009, 69:633-648. 10.1007/s11103-008-9446-x, 19096760.
-
(2009)
Plant Mol Biol
, vol.69
, pp. 633-648
-
-
Cutanda-Perez, M.C.1
Ageorges, A.2
Gomez, C.3
Vialet, S.4
Terrier, N.5
Romieu, C.6
Torregrosa, L.7
-
34
-
-
33847102623
-
White grapes arose through the mutation of two similar and adjacent regulatory genes
-
10.1111/j.1365-313X.2006.02997.x, 17316172
-
Walker AR, Lee E, Bogs J, McDavid DA, Thomas MR, Robinson SP. White grapes arose through the mutation of two similar and adjacent regulatory genes. Plant J 2007, 49:772-785. 10.1111/j.1365-313X.2006.02997.x, 17316172.
-
(2007)
Plant J
, vol.49
, pp. 772-785
-
-
Walker, A.R.1
Lee, E.2
Bogs, J.3
McDavid, D.A.4
Thomas, M.R.5
Robinson, S.P.6
-
35
-
-
0036943975
-
Myb-related genes of the Kyoho grape (Vitis labruscana) regulate anthocyanin biosynthesis
-
10.1007/s00425-002-0830-5, 12355152
-
Kobayashi S, Ishimaru M, Hiraoka K, Honda C. Myb-related genes of the Kyoho grape (Vitis labruscana) regulate anthocyanin biosynthesis. Planta 2002, 215:924-933. 10.1007/s00425-002-0830-5, 12355152.
-
(2002)
Planta
, vol.215
, pp. 924-933
-
-
Kobayashi, S.1
Ishimaru, M.2
Hiraoka, K.3
Honda, C.4
-
36
-
-
0037171826
-
Association of dwarfism and floral induction with a grape 'green revolution' mutation
-
10.1038/416847a, 11976683
-
Boss PK, Thomas MR. Association of dwarfism and floral induction with a grape 'green revolution' mutation. Nature 2002, 416:847-850. 10.1038/416847a, 11976683.
-
(2002)
Nature
, vol.416
, pp. 847-850
-
-
Boss, P.K.1
Thomas, M.R.2
-
37
-
-
70350676670
-
The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries
-
10.1104/pp.109.142059, 2773091, 19741049
-
Czemmel S, Stracke R, Weisshaar B, Cordon N, Harris NN, Walker AR, Robinson SP, Bogs J. The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries. Plant Physiol 2009, 151:1513-1530. 10.1104/pp.109.142059, 2773091, 19741049.
-
(2009)
Plant Physiol
, vol.151
, pp. 1513-1530
-
-
Czemmel, S.1
Stracke, R.2
Weisshaar, B.3
Cordon, N.4
Harris, N.N.5
Walker, A.R.6
Robinson, S.P.7
Bogs, J.8
-
38
-
-
59849108361
-
Molecular phylogeny and expression of poplar circadian clock genes, LHY1 and LHY2
-
10.1111/j.1469-8137.2008.02714.x, 19140936
-
Takata N, Saito S, Tanaka Saito C, Nanjo T, Shinohara K, Uemura M. Molecular phylogeny and expression of poplar circadian clock genes, LHY1 and LHY2. New Phytol 2009, 181:808-819. 10.1111/j.1469-8137.2008.02714.x, 19140936.
-
(2009)
New Phytol
, vol.181
, pp. 808-819
-
-
Takata, N.1
Saito, S.2
Tanaka Saito, C.3
Nanjo, T.4
Shinohara, K.5
Uemura, M.6
-
39
-
-
70349741081
-
REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways
-
10.1073/pnas.0813035106, 2757846, 19805390
-
Rawat R, Schwartz J, Jones MA, Sairanen I, Cheng Y, Andersson CR, Zhao Y, Ljung K, Harmer SL. REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways. Proc Natl Acad Sci USA 2009, 106:16883-16888. 10.1073/pnas.0813035106, 2757846, 19805390.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 16883-16888
-
-
Rawat, R.1
Schwartz, J.2
Jones, M.A.3
Sairanen, I.4
Cheng, Y.5
Andersson, C.R.6
Zhao, Y.7
Ljung, K.8
Harmer, S.L.9
-
40
-
-
84878661539
-
The plasticity of the grapevine berry transcriptome
-
10.1186/gb-2013-14-6-r54, 3706941, 23759170
-
Dal Santo S, Tornielli GB, Zenoni S, Fasoli M, Farina L, Anesi A, Guzzo F, Delledonne M, Pezzotti M. The plasticity of the grapevine berry transcriptome. Genome Biol 2013, 14:r54. 10.1186/gb-2013-14-6-r54, 3706941, 23759170.
-
(2013)
Genome Biol
, vol.14
-
-
Dal Santo, S.1
Tornielli, G.B.2
Zenoni, S.3
Fasoli, M.4
Farina, L.5
Anesi, A.6
Guzzo, F.7
Delledonne, M.8
Pezzotti, M.9
-
41
-
-
0034671791
-
Orchestrated transcription of key pathways in Arabidopsis by the circadian clock
-
10.1126/science.290.5499.2110, 11118138
-
Harmer SL, Hogenesch JB, Straume M, Chang HS, Han B, Zhu T, Wang X, Kreps JA, Kay SA. Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. Science 2000, 290:2110-2113. 10.1126/science.290.5499.2110, 11118138.
-
(2000)
Science
, vol.290
, pp. 2110-2113
-
-
Harmer, S.L.1
Hogenesch, J.B.2
Straume, M.3
Chang, H.S.4
Han, B.5
Zhu, T.6
Wang, X.7
Kreps, J.A.8
Kay, S.A.9
-
42
-
-
38849124369
-
Transcriptomic and metabolite analyses of Cabernet Sauvignon grape berry development
-
10.1186/1471-2164-8-429, 2220006, 18034876
-
Deluc LG, Grimplet J, Wheatley MD, Tillett RL, Quilici DR, Osborne C, Schooley DA, Schlauch KA, Cushman JC, Cramer GR. Transcriptomic and metabolite analyses of Cabernet Sauvignon grape berry development. BMC Genomics 2007, 8:429. 10.1186/1471-2164-8-429, 2220006, 18034876.
-
(2007)
BMC Genomics
, vol.8
, pp. 429
-
-
Deluc, L.G.1
Grimplet, J.2
Wheatley, M.D.3
Tillett, R.L.4
Quilici, D.R.5
Osborne, C.6
Schooley, D.A.7
Schlauch, K.A.8
Cushman, J.C.9
Cramer, G.R.10
-
43
-
-
81255178663
-
Transcriptional analysis of late ripening stages of grapevine berry
-
10.1186/1471-2229-11-165, 3233516, 22098939
-
Guillaumie S, Fouquet R, Kappel C, Camps C, Terrier N, Moncomble D, Dunlevy JD, Davies C, Boss PK, Delrot S. Transcriptional analysis of late ripening stages of grapevine berry. BMC Plant Biol 2011, 11:165. 10.1186/1471-2229-11-165, 3233516, 22098939.
-
(2011)
BMC Plant Biol
, vol.11
, pp. 165
-
-
Guillaumie, S.1
Fouquet, R.2
Kappel, C.3
Camps, C.4
Terrier, N.5
Moncomble, D.6
Dunlevy, J.D.7
Davies, C.8
Boss, P.K.9
Delrot, S.10
-
44
-
-
0034068234
-
Diurnal regulation of Hsp70s in leaf tissue
-
10.1046/j.1365-313x.2000.00673.x, 10758488
-
Li QB, Haskell D, Zhang C, Sung DY, Guy C. Diurnal regulation of Hsp70s in leaf tissue. Plant J 2000, 21:373-378. 10.1046/j.1365-313x.2000.00673.x, 10758488.
-
(2000)
Plant J
, vol.21
, pp. 373-378
-
-
Li, Q.B.1
Haskell, D.2
Zhang, C.3
Sung, D.Y.4
Guy, C.5
-
45
-
-
79551662808
-
Timing of plant immune responses by a central circadian regulator
-
10.1038/nature09766, 21293378
-
Wang W, Barnaby JY, Tada Y, Li H, Tor M, Caldelari D, Lee DU, Fu XD, Dong X. Timing of plant immune responses by a central circadian regulator. Nature 2011, 470:110-114. 10.1038/nature09766, 21293378.
-
(2011)
Nature
, vol.470
, pp. 110-114
-
-
Wang, W.1
Barnaby, J.Y.2
Tada, Y.3
Li, H.4
Tor, M.5
Caldelari, D.6
Lee, D.U.7
Fu, X.D.8
Dong, X.9
-
46
-
-
84881615213
-
Modulation of plant immunity by light, circadian rhythm, and temperature
-
10.1016/j.pbi.2013.06.017, 23856082
-
Hua J. Modulation of plant immunity by light, circadian rhythm, and temperature. Curr Opin Plant Biol 2013, 16:406-413. 10.1016/j.pbi.2013.06.017, 23856082.
-
(2013)
Curr Opin Plant Biol
, vol.16
, pp. 406-413
-
-
Hua, J.1
-
47
-
-
0033200227
-
Early nuclear events in plant defence signalling: rapid gene activation by WRKY transcription factors
-
10.1093/emboj/18.17.4689, 1171542, 10469648
-
Eulgem T, Rushton PJ, Schmelzer E, Hahlbrock K, Somssich IE. Early nuclear events in plant defence signalling: rapid gene activation by WRKY transcription factors. EMBO J 1999, 18:4689-4699. 10.1093/emboj/18.17.4689, 1171542, 10469648.
-
(1999)
EMBO J
, vol.18
, pp. 4689-4699
-
-
Eulgem, T.1
Rushton, P.J.2
Schmelzer, E.3
Hahlbrock, K.4
Somssich, I.E.5
-
48
-
-
34547657394
-
Isolation and characterization of a Vitis vinifera transcription factor, VvWRKY1, and its effect on responses to fungal pathogens in transgenic tobacco plants
-
10.1093/jxb/erm062, 17456504
-
Marchive C, Mzid R, Deluc L, Barrieu F, Pirrello J, Gauthier A, Corio-Costet MF, Regad F, Cailleteau B, Hamdi S, Lauvergeat V. Isolation and characterization of a Vitis vinifera transcription factor, VvWRKY1, and its effect on responses to fungal pathogens in transgenic tobacco plants. J Exp Bot 2007, 58:1999-2010. 10.1093/jxb/erm062, 17456504.
-
(2007)
J Exp Bot
, vol.58
, pp. 1999-2010
-
-
Marchive, C.1
Mzid, R.2
Deluc, L.3
Barrieu, F.4
Pirrello, J.5
Gauthier, A.6
Corio-Costet, M.F.7
Regad, F.8
Cailleteau, B.9
Hamdi, S.10
Lauvergeat, V.11
-
49
-
-
84888409294
-
The R2R3-MYB transcription factors MYB14 and MYB15 regulate stilbene biosynthesis in Vitis vinifera
-
10.1105/tpc.113.117127, 24151295
-
Holl J, Vannozzi A, Czemmel S, D'Onofrio C, Walker AR, Rausch T, Lucchin M, Boss PK, Dry IB, Bogs J. The R2R3-MYB transcription factors MYB14 and MYB15 regulate stilbene biosynthesis in Vitis vinifera. Plant Cell 2013, 25:4135-4149. 10.1105/tpc.113.117127, 24151295.
-
(2013)
Plant Cell
, vol.25
, pp. 4135-4149
-
-
Holl, J.1
Vannozzi, A.2
Czemmel, S.3
D'Onofrio, C.4
Walker, A.R.5
Rausch, T.6
Lucchin, M.7
Boss, P.K.8
Dry, I.B.9
Bogs, J.10
-
50
-
-
0037415726
-
Low temperature inhibits RNA silencing-mediated defence by the control of siRNA generation
-
10.1093/emboj/cdg74, 140757, 12554663
-
Szittya G, Silhavy D, Molnar A, Havelda Z, Lovas A, Lakatos L, Banfalvi Z, Burgyan J. Low temperature inhibits RNA silencing-mediated defence by the control of siRNA generation. EMBO J 2003, 22:633-640. 10.1093/emboj/cdg74, 140757, 12554663.
-
(2003)
EMBO J
, vol.22
, pp. 633-640
-
-
Szittya, G.1
Silhavy, D.2
Molnar, A.3
Havelda, Z.4
Lovas, A.5
Lakatos, L.6
Banfalvi, Z.7
Burgyan, J.8
-
51
-
-
84864011442
-
Temperature-dependent survival of Turnip crinkle virus-infected arabidopsis plants relies on an RNA silencing-based defense that requires dcl2, AGO2, and HEN1
-
10.1128/JVI.00497-12, 3393596, 22496240
-
Zhang X, Singh J, Li D, Qu F. Temperature-dependent survival of Turnip crinkle virus-infected arabidopsis plants relies on an RNA silencing-based defense that requires dcl2, AGO2, and HEN1. J Virol 2012, 86:6847-6854. 10.1128/JVI.00497-12, 3393596, 22496240.
-
(2012)
J Virol
, vol.86
, pp. 6847-6854
-
-
Zhang, X.1
Singh, J.2
Li, D.3
Qu, F.4
-
52
-
-
0035007091
-
Analysis of the function of two circadian-regulated CONSTANS-LIKE genes
-
10.1046/j.1365-313x.2001.01003.x, 11359606
-
Ledger S, Strayer C, Ashton F, Kay SA, Putterill J. Analysis of the function of two circadian-regulated CONSTANS-LIKE genes. Plant J 2001, 26:15-22. 10.1046/j.1365-313x.2001.01003.x, 11359606.
-
(2001)
Plant J
, vol.26
, pp. 15-22
-
-
Ledger, S.1
Strayer, C.2
Ashton, F.3
Kay, S.A.4
Putterill, J.5
-
53
-
-
0035800467
-
Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock
-
10.1126/science.1061320, 11486091
-
Alabadi D, Oyama T, Yanovsky MJ, Harmon FG, Mas P, Kay SA. Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock. Science 2001, 293:880-883. 10.1126/science.1061320, 11486091.
-
(2001)
Science
, vol.293
, pp. 880-883
-
-
Alabadi, D.1
Oyama, T.2
Yanovsky, M.J.3
Harmon, F.G.4
Mas, P.5
Kay, S.A.6
-
54
-
-
0036100299
-
LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis
-
10.1016/S1534-5807(02)00170-3, 12015970
-
Mizoguchi T, Wheatley K, Hanzawa Y, Wright L, Mizoguchi M, Song HR, Carre IA, Coupland G. LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis. Dev Cell 2002, 2:629-641. 10.1016/S1534-5807(02)00170-3, 12015970.
-
(2002)
Dev Cell
, vol.2
, pp. 629-641
-
-
Mizoguchi, T.1
Wheatley, K.2
Hanzawa, Y.3
Wright, L.4
Mizoguchi, M.5
Song, H.R.6
Carre, I.A.7
Coupland, G.8
-
55
-
-
0037197943
-
Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis
-
10.1016/S0960-9822(02)00815-1, 12007421
-
Alabadi D, Yanovsky MJ, Mas P, Harmer SL, Kay SA. Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis. Curr Biol 2002, 12:757-761. 10.1016/S0960-9822(02)00815-1, 12007421.
-
(2002)
Curr Biol
, vol.12
, pp. 757-761
-
-
Alabadi, D.1
Yanovsky, M.J.2
Mas, P.3
Harmer, S.L.4
Kay, S.A.5
-
56
-
-
33644813858
-
Positive and negative factors confer phase-specific circadian regulation of transcription in Arabidopsis
-
10.1105/tpc.105.033035, 1167542, 15923346
-
Harmer SL, Kay SA. Positive and negative factors confer phase-specific circadian regulation of transcription in Arabidopsis. Plant Cell 2005, 17:1926-1940. 10.1105/tpc.105.033035, 1167542, 15923346.
-
(2005)
Plant Cell
, vol.17
, pp. 1926-1940
-
-
Harmer, S.L.1
Kay, S.A.2
-
57
-
-
53249084807
-
The development of protein microarrays and their applications in DNA-protein and protein-protein interaction analyses of Arabidopsis transcription factors
-
10.1093/mp/ssm009, 2756181, 19802365
-
Gong W, He K, Covington M, Dinesh-Kumar SP, Snyder M, Harmer SL, Zhu YX, Deng XW. The development of protein microarrays and their applications in DNA-protein and protein-protein interaction analyses of Arabidopsis transcription factors. Mol Plant 2008, 1:27-41. 10.1093/mp/ssm009, 2756181, 19802365.
-
(2008)
Mol Plant
, vol.1
, pp. 27-41
-
-
Gong, W.1
He, K.2
Covington, M.3
Dinesh-Kumar, S.P.4
Snyder, M.5
Harmer, S.L.6
Zhu, Y.X.7
Deng, X.W.8
-
58
-
-
57849139821
-
The circadian clock in Arabidopsis roots is a simplified slave version of the clock in shoots
-
10.1126/science.1161403, 19095940
-
James AB, Monreal JA, Nimmo GA, Kelly CL, Herzyk P, Jenkins GI, Nimmo HG. The circadian clock in Arabidopsis roots is a simplified slave version of the clock in shoots. Science 2008, 322:1832-1835. 10.1126/science.1161403, 19095940.
-
(2008)
Science
, vol.322
, pp. 1832-1835
-
-
James, A.B.1
Monreal, J.A.2
Nimmo, G.A.3
Kelly, C.L.4
Herzyk, P.5
Jenkins, G.I.6
Nimmo, H.G.7
-
59
-
-
54749087162
-
A morning-specific phytohormone gene expression program underlying rhythmic plant growth
-
10.1371/journal.pbio.0060225, 2535664, 18798691
-
Michael TP, Breton G, Hazen SP, Priest H, Mockler TC, Kay SA, Chory J. A morning-specific phytohormone gene expression program underlying rhythmic plant growth. PLoS Biol 2008, 6:e225. 10.1371/journal.pbio.0060225, 2535664, 18798691.
-
(2008)
PLoS Biol
, vol.6
-
-
Michael, T.P.1
Breton, G.2
Hazen, S.P.3
Priest, H.4
Mockler, T.C.5
Kay, S.A.6
Chory, J.7
-
60
-
-
84890624243
-
Interactions between ethylene and auxin are crucial to the control of grape (Vitis vinifera L.) berry ripening
-
10.1186/1471-2229-13-222, 3878033, 24364881
-
Bottcher C, Burbidge CA, Boss PK, Davies C. Interactions between ethylene and auxin are crucial to the control of grape (Vitis vinifera L.) berry ripening. BMC Plant Biol 2013, 13:222. 10.1186/1471-2229-13-222, 3878033, 24364881.
-
(2013)
BMC Plant Biol
, vol.13
, pp. 222
-
-
Bottcher, C.1
Burbidge, C.A.2
Boss, P.K.3
Davies, C.4
-
61
-
-
79959327617
-
Circadian oscillation of gibberellin signaling in Arabidopsis
-
10.1073/pnas.1101050108, 3107313, 21576475
-
Arana MV, Marin-de la Rosa N, Maloof JN, Blazquez MA, Alabadi D. Circadian oscillation of gibberellin signaling in Arabidopsis. Proc Natl Acad Sci USA 2011, 108:9292-9297. 10.1073/pnas.1101050108, 3107313, 21576475.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 9292-9297
-
-
Arana, M.V.1
Marin-de la Rosa, N.2
Maloof, J.N.3
Blazquez, M.A.4
Alabadi, D.5
-
62
-
-
2342648914
-
Retrotransposon-induced mutations in grape skin color
-
10.1126/science.1095011, 15143274
-
Kobayashi S, Goto-Yamamoto N, Hirochika H. Retrotransposon-induced mutations in grape skin color. Science 2004, 304:982. 10.1126/science.1095011, 15143274.
-
(2004)
Science
, vol.304
, pp. 982
-
-
Kobayashi, S.1
Goto-Yamamoto, N.2
Hirochika, H.3
-
63
-
-
33748974422
-
Molecular genetics of berry colour variation in table grape
-
10.1007/s00438-006-0149-1, 16924546
-
Lijavetzky D, Ruiz-Garcia L, Cabezas JA, De Andres MT, Bravo G, Ibanez A, Carreno J, Cabello F, Ibanez J, Martinez-Zapater JM. Molecular genetics of berry colour variation in table grape. Mol Genet Genomics 2006, 276:427-435. 10.1007/s00438-006-0149-1, 16924546.
-
(2006)
Mol Genet Genomics
, vol.276
, pp. 427-435
-
-
Lijavetzky, D.1
Ruiz-Garcia, L.2
Cabezas, J.A.3
De Andres, M.T.4
Bravo, G.5
Ibanez, A.6
Carreno, J.7
Cabello, F.8
Ibanez, J.9
Martinez-Zapater, J.M.10
-
64
-
-
33846846559
-
Wine grape (Vitis vinifera L.) color associates with allelic variation in the domestication gene VvmybA1
-
10.1007/s00122-006-0472-2, 17221259
-
This P, Lacombe T, Cadle-Davidson M, Owens CL. Wine grape (Vitis vinifera L.) color associates with allelic variation in the domestication gene VvmybA1. Theor Appl Genet 2007, 114:723-730. 10.1007/s00122-006-0472-2, 17221259.
-
(2007)
Theor Appl Genet
, vol.114
, pp. 723-730
-
-
This, P.1
Lacombe, T.2
Cadle-Davidson, M.3
Owens, C.L.4
-
65
-
-
37349125222
-
Transcriptional control of anthocyanin biosynthetic genes in extreme phenotypes for berry pigmentation of naturally occurring grapevines
-
10.1186/1471-2229-7-46, 2147006, 17760970
-
Castellarin SD, Di Gaspero G. Transcriptional control of anthocyanin biosynthetic genes in extreme phenotypes for berry pigmentation of naturally occurring grapevines. BMC Plant Biol 2007, 7:46. 10.1186/1471-2229-7-46, 2147006, 17760970.
-
(2007)
BMC Plant Biol
, vol.7
, pp. 46
-
-
Castellarin, S.D.1
Di Gaspero, G.2
-
66
-
-
0030292786
-
Expression of anthocyanin biosynthesis pathway genes in red and white grapes
-
10.1007/BF00019111, 8980508
-
Boss PK, Davies C, Robinson SP. Expression of anthocyanin biosynthesis pathway genes in red and white grapes. Plant Mol Biol 1996, 32:565-569. 10.1007/BF00019111, 8980508.
-
(1996)
Plant Mol Biol
, vol.32
, pp. 565-569
-
-
Boss, P.K.1
Davies, C.2
Robinson, S.P.3
-
67
-
-
0034713297
-
Targeted destabilization of HY5 during light-regulated development of Arabidopsis
-
10.1038/35013076, 10839542
-
Osterlund MT, Hardtke CS, Wei N, Deng XW. Targeted destabilization of HY5 during light-regulated development of Arabidopsis. Nature 2000, 405:462-466. 10.1038/35013076, 10839542.
-
(2000)
Nature
, vol.405
, pp. 462-466
-
-
Osterlund, M.T.1
Hardtke, C.S.2
Wei, N.3
Deng, X.W.4
-
68
-
-
0842299514
-
Genome-wide analysis of gene expression reveals function of the bZIP transcription factor HY5 in the UV-B response of Arabidopsis
-
10.1073/pnas.0308044100, 337064, 14739338
-
Ulm R, Baumann A, Oravecz A, Mate Z, Adam E, Oakeley EJ, Schafer E, Nagy F. Genome-wide analysis of gene expression reveals function of the bZIP transcription factor HY5 in the UV-B response of Arabidopsis. Proc Natl Acad Sci USA 2004, 101:1397-1402. 10.1073/pnas.0308044100, 337064, 14739338.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 1397-1402
-
-
Ulm, R.1
Baumann, A.2
Oravecz, A.3
Mate, Z.4
Adam, E.5
Oakeley, E.J.6
Schafer, E.7
Nagy, F.8
-
69
-
-
34250780751
-
Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development
-
10.1105/tpc.106.047688, 1867377, 17337630
-
Lee J, He K, Stolc V, Lee H, Figueroa P, Gao Y, Tongprasit W, Zhao H, Lee I, Deng XW. Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. Plant Cell 2007, 19:731-749. 10.1105/tpc.106.047688, 1867377, 17337630.
-
(2007)
Plant Cell
, vol.19
, pp. 731-749
-
-
Lee, J.1
He, K.2
Stolc, V.3
Lee, H.4
Figueroa, P.5
Gao, Y.6
Tongprasit, W.7
Zhao, H.8
Lee, I.9
Deng, X.W.10
-
70
-
-
0006959565
-
Temperature and enzymic control of malate metabolism in berries of Vitis vinifera
-
Ruffner HP, Hawker JS, Hale CR. Temperature and enzymic control of malate metabolism in berries of Vitis vinifera. Phytochemistry 1976, 15:1877-1880.
-
(1976)
Phytochemistry
, vol.15
, pp. 1877-1880
-
-
Ruffner, H.P.1
Hawker, J.S.2
Hale, C.R.3
-
71
-
-
20444475045
-
Impaired pH homeostasis in Arabidopsis lacking the vacuolar dicarboxylate transporter and analysis of carboxylic acid transport across the tonoplast
-
10.1104/pp.104.058453, 1065391, 15728336
-
Hurth MA, Suh SJ, Kretzschmar T, Geis T, Bregante M, Gambale F, Martinoia E, Neuhaus HE. Impaired pH homeostasis in Arabidopsis lacking the vacuolar dicarboxylate transporter and analysis of carboxylic acid transport across the tonoplast. Plant Physiol 2005, 137:901-910. 10.1104/pp.104.058453, 1065391, 15728336.
-
(2005)
Plant Physiol
, vol.137
, pp. 901-910
-
-
Hurth, M.A.1
Suh, S.J.2
Kretzschmar, T.3
Geis, T.4
Bregante, M.5
Gambale, F.6
Martinoia, E.7
Neuhaus, H.E.8
-
72
-
-
84894904893
-
A novel method for non-destructive determination of the sugar content and for classification of grape berries
-
Stein U, Blaich R, Wind R. A novel method for non-destructive determination of the sugar content and for classification of grape berries. Vitis 1983, 22:15-22.
-
(1983)
Vitis
, vol.22
, pp. 15-22
-
-
Stein, U.1
Blaich, R.2
Wind, R.3
-
73
-
-
33749673122
-
Accumulation and extractability of grape skin tannins and anthocyanins at different advanced physiological stages
-
10.1021/jf061467h, 16968102
-
Fournand D, Vicens A, Sidhoum L, Souquet JM, Moutounet M, Cheynier V. Accumulation and extractability of grape skin tannins and anthocyanins at different advanced physiological stages. J Agric Food Chem 2006, 54:7331-7338. 10.1021/jf061467h, 16968102.
-
(2006)
J Agric Food Chem
, vol.54
, pp. 7331-7338
-
-
Fournand, D.1
Vicens, A.2
Sidhoum, L.3
Souquet, J.M.4
Moutounet, M.5
Cheynier, V.6
-
74
-
-
80051761466
-
Influence of grape density and harvest date on changes in phenolic composition, phenol extractability indices, and instrumental texture properties during ripening
-
10.1021/jf201318x, 21749143
-
Rolle L, Segade SR, Torchio F, Giacosa S, Cagnasso E, Marengo F, Gerbi V. Influence of grape density and harvest date on changes in phenolic composition, phenol extractability indices, and instrumental texture properties during ripening. J Agric Food Chem 2011, 59:8796-8805. 10.1021/jf201318x, 21749143.
-
(2011)
J Agric Food Chem
, vol.59
, pp. 8796-8805
-
-
Rolle, L.1
Segade, S.R.2
Torchio, F.3
Giacosa, S.4
Cagnasso, E.5
Marengo, F.6
Gerbi, V.7
-
75
-
-
33751234803
-
An optimized grapevine RNA isolation procedure and statistical determination of reference genes for real-time RT-PCR during berry development
-
10.1186/1471-2229-6-27, 1654153, 17105665
-
Reid KE, Olsson N, Schlosser J, Peng F, Lund ST. An optimized grapevine RNA isolation procedure and statistical determination of reference genes for real-time RT-PCR during berry development. BMC Plant Biol 2006, 6:27. 10.1186/1471-2229-6-27, 1654153, 17105665.
-
(2006)
BMC Plant Biol
, vol.6
, pp. 27
-
-
Reid, K.E.1
Olsson, N.2
Schlosser, J.3
Peng, F.4
Lund, S.T.5
-
76
-
-
12344280017
-
Summaries of Affymetrix GeneChip probe level data
-
10.1093/nar/gng015, 150247, 12582260
-
Irizarry RA, Bolstad BM, Collin F, Cope LM, Hobbs B, Speed TP. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Res 2003, 31:e15. 10.1093/nar/gng015, 150247, 12582260.
-
(2003)
Nucleic Acids Res
, vol.31
-
-
Irizarry, R.A.1
Bolstad, B.M.2
Collin, F.3
Cope, L.M.4
Hobbs, B.5
Speed, T.P.6
-
77
-
-
77954339096
-
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling
-
10.1093/nar/gkq388, 2896184, 20478823
-
Medina I, Carbonell J, Pulido L, Madeira SC, Goetz S, Conesa A, Tarraga J, Pascual-Montano A, Nogales-Cadenas R, Santoyo J, García F, Marbà M, Montaner D, Dopazo J. Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling. Nucleic Acids Res 2010, 38:W210-W213. 10.1093/nar/gkq388, 2896184, 20478823.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Medina, I.1
Carbonell, J.2
Pulido, L.3
Madeira, S.C.4
Goetz, S.5
Conesa, A.6
Tarraga, J.7
Pascual-Montano, A.8
Nogales-Cadenas, R.9
Santoyo, J.10
García, F.11
Marbà, M.12
Montaner, D.13
Dopazo, J.14
-
78
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Article3
-
Smyth GK. Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 2004, 3(1):1-25. Article3.
-
(2004)
Stat Appl Genet Mol Biol
, vol.3
, Issue.1
, pp. 1-25
-
-
Smyth, G.K.1
-
79
-
-
33646147811
-
MaSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments
-
10.1093/bioinformatics/btl056, 16481333
-
Conesa A, Nueda MJ, Ferrer A, Talon M. maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments. Bioinformatics 2006, 22:1096-1102. 10.1093/bioinformatics/btl056, 16481333.
-
(2006)
Bioinformatics
, vol.22
, pp. 1096-1102
-
-
Conesa, A.1
Nueda, M.J.2
Ferrer, A.3
Talon, M.4
-
80
-
-
0042863923
-
Analysis of gene expression data using self-organizing maps
-
10.1016/S0014-5793(99)00524-4, 10371154
-
Toronen P, Kolehmainen M, Wong G, Castren E. Analysis of gene expression data using self-organizing maps. FEBS Lett 1999, 451:142-146. 10.1016/S0014-5793(99)00524-4, 10371154.
-
(1999)
FEBS Lett
, vol.451
, pp. 142-146
-
-
Toronen, P.1
Kolehmainen, M.2
Wong, G.3
Castren, E.4
-
81
-
-
0035532141
-
Estimating the number of clusters in a data set via the gap statistic
-
Tibshirani R, Walther G, Hastie T. Estimating the number of clusters in a data set via the gap statistic. J R Stat Soc B 2001, 63:411-423.
-
(2001)
J R Stat Soc B
, vol.63
, pp. 411-423
-
-
Tibshirani, R.1
Walther, G.2
Hastie, T.3
-
82
-
-
84860375778
-
Comparative analysis of grapevine whole-genome gene predictions, functional annotation, categorization and integration of the predicted gene sequences
-
10.1186/1756-0500-5-213, 3419625, 22554261
-
Grimplet J, Van Hemert J, Carbonell-Bejerano P, Diaz-Riquelme J, Dickerson J, Fennell A, Pezzotti M, Martinez-Zapater JM. Comparative analysis of grapevine whole-genome gene predictions, functional annotation, categorization and integration of the predicted gene sequences. BMC Res Notes 2012, 5:213. 10.1186/1756-0500-5-213, 3419625, 22554261.
-
(2012)
BMC Res Notes
, vol.5
, pp. 213
-
-
Grimplet, J.1
Van Hemert, J.2
Carbonell-Bejerano, P.3
Diaz-Riquelme, J.4
Dickerson, J.5
Fennell, A.6
Pezzotti, M.7
Martinez-Zapater, J.M.8
-
83
-
-
1542399989
-
FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes
-
10.1093/bioinformatics/btg455, 14990455
-
Al-Shahrour F, Diaz-Uriarte R, Dopazo J. FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes. Bioinformatics 2004, 20:578-580. 10.1093/bioinformatics/btg455, 14990455.
-
(2004)
Bioinformatics
, vol.20
, pp. 578-580
-
-
Al-Shahrour, F.1
Diaz-Uriarte, R.2
Dopazo, J.3
-
84
-
-
57649133991
-
VENNY. An interactive tool for comparing lists with Venn Diagrams
-
VENNY. An interactive tool for comparing lists with Venn Diagrams. [http://bioinfogp.cnb.csic.es/tools/venny/index.html].
-
-
-
-
85
-
-
84865204375
-
Complexity in the wiring and regulation of plant circadian networks
-
10.1016/j.cub.2012.07.025, 3427731, 22917516
-
Nagel DH, Kay SA. Complexity in the wiring and regulation of plant circadian networks. Curr Biol 2012, 22:R648-R657. 10.1016/j.cub.2012.07.025, 3427731, 22917516.
-
(2012)
Curr Biol
, vol.22
-
-
Nagel, D.H.1
Kay, S.A.2
|