메뉴 건너뛰기




Volumn 95, Issue 2, 2014, Pages 254-268

Phylogeography of Peromyscus schmidlyi: An endemic of the Sierra Madre Occidental, Mexico

Author keywords

Gene flow; Historic demography; Mitochondrial DNA; Phylogeny; Pine oak forests; Schmidly's deer mouse

Indexed keywords

CYTOCHROME; DISPERSAL; ENDEMIC SPECIES; GENE FLOW; GENETIC MARKER; GENETIC STRUCTURE; GENETIC VARIATION; MITOCHONDRIAL DNA; MIXED FOREST; MORPHOMETRY; PHYLOGENETICS; PHYLOGENY; PHYLOGEOGRAPHY; PLEISTOCENE; POPULATION GROWTH; RODENT; UPLAND REGION;

EID: 84898857663     PISSN: 00222372     EISSN: 15451542     Source Type: Journal    
DOI: 10.1644/13-MAMM-A-166     Document Type: Article
Times cited : (8)

References (109)
  • 1
    • 84871669328 scopus 로고    scopus 로고
    • Quasi-one-dimensional waves in rodent population in heterogeneous habitats: A consequence of elevational gradients on spatio-temporal dynamics
    • ABRAMSON, G., L. GIUGGIOLI, R. R. PARMENTER, AND V. M. KENKRE. 2013. Quasi-one-dimensional waves in rodent population in heterogeneous habitats: a consequence of elevational gradients on spatio-temporal dynamics. Journal of Theoretical Biology 319:96-101.
    • (2013) Journal of Theoretical Biology , vol.319 , pp. 96-101
    • Abramson, G.1    Giuggioli, L.2    Parmenter, R.R.3    Kenkre, V.M.4
  • 3
  • 4
    • 0030056912 scopus 로고    scopus 로고
    • The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism
    • ARIS-BROSOU, S., AND L. EXCOFFIER. 1996. The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism. Molecular Biology and Evolution 13:494-504.
    • (1996) Molecular Biology and Evolution , vol.13 , pp. 494-504
    • Aris-Brosou, S.1    Excoffier, L.2
  • 6
    • 0002484852 scopus 로고
    • Mammals of the Mexican state of Durango. Publications of the Museum
    • BAKER, R. H., AND J. K. GREER. 1962. Mammals of the Mexican state of Durango. Publications of the Museum, Michigan State University Biological Series 35:25-154.
    • (1962) Michigan State University Biological Series , vol.35 , pp. 25-154
    • Baker, R.H.1    Greer, J.K.2
  • 7
    • 0032900678 scopus 로고    scopus 로고
    • Median-joining networks for inferring intraspecific phylogenies
    • BANDELT, H. J., P. FORSTER, AND A. RÖ HL. 1999. Median-joining networks for inferring intraspecific phylogenies. Molecular Biology and Evolution 16:37-48.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 37-48
    • Bandelt, H.J.1    Forster, P.2    Rö, A.3
  • 8
    • 0002537809 scopus 로고    scopus 로고
    • Sources of glacial moisture in Mesoamerica
    • BRADBURY, J. P
    • BRADBURY, J. P. 1997. Sources of glacial moisture in Mesoamerica. Quaternary International 43-44:97-110.
    • (1997) Quaternary International , vol.43-44 , pp. 97-110
  • 11
    • 83655191932 scopus 로고    scopus 로고
    • Diversification in the Mexican horned lizard Phrynosoma orbicu-lare across a dynamic landscape
    • BRYSON, R. W., U. O. GARĆIA-VÁZQUEZ, AND B. R. RIDDLE. 2012a. Diversification in the Mexican horned lizard Phrynosoma orbicu-lare across a dynamic landscape. Molecular Phylogenetics and Evolution 62:87-96.
    • (2012) Molecular Phylogenetics and Evolution , vol.62 , pp. 87-96
    • Bryson, R.W.1    Garćia-Vázquez, U.O.2    Riddle, B.R.3
  • 12
    • 83655161371 scopus 로고    scopus 로고
    • Relative roles of Neogene vicariance and Quaternary climate change on the historical diversification of bunchgrass lizards (Sceloporus scalaris group) in Mexico
    • BRYSON, R. W., U. O. GARĆIA-VÁZQUEZ, AND B. R. RIDDLE. 2012b. Relative roles of Neogene vicariance and Quaternary climate change on the historical diversification of bunchgrass lizards (Sceloporus scalaris group) in Mexico. Molecular Phylogenetics and Evolution 62:447-457.
    • (2012) Molecular Phylogenetics and Evolution , vol.62 , pp. 447-457
    • Bryson, R.W.1    Garćia-Vázquez, U.O.2    Riddle, B.R.3
  • 13
    • 79952653357 scopus 로고    scopus 로고
    • Evolutionary drivers of phylogeographical diversity in the highlands of Mexico: A case study of the Crotalus triseriatus species group of montane rattlesnakes
    • BRYSON, R. W., R. W. MURPHY, A. LATHROP, AND D. LAZCANO-VILLAREAL. 2011. Evolutionary drivers of phylogeographical diversity in the highlands of Mexico: a case study of the Crotalus triseriatus species group of montane rattlesnakes. Journal of Biogeography 38:697-710.
    • (2011) Journal of Biogeography , vol.38 , pp. 697-710
    • Bryson, R.W.1    Murphy, R.W.2    Lathrop, A.3    Lazcano-Villareal, D.4
  • 14
    • 84855770713 scopus 로고    scopus 로고
    • Tracing the origins of widespread highland species: A case of Neogene diversification across the Mexican sierras in an endemic lizard
    • BRYSON, R. W., AND B. R. RIDDLE. 2011. Tracing the origins of widespread highland species: a case of Neogene diversification across the Mexican sierras in an endemic lizard. Biological Journal of the Linnean Society 105:382-394.
    • (2011) Biological Journal of the Linnean Society , vol.105 , pp. 382-394
    • Bryson, R.W.1    Riddle, B.R.2
  • 15
    • 41849087955 scopus 로고
    • Prominence of the Sierra Madre Occidental in the biological diversity of Mexico
    • (L. F. DeBano, P. F. Ffolliott, A. Ortega-Rubio, G. J. Gottfried, R. H. Hamre, and C. B. Edminster, technical coordinators). United States Department of Agriculture Forest Service, General Technical Report RM GTR 264: 1-669
    • BYE, R. 1995. Prominence of the Sierra Madre Occidental in the biological diversity of Mexico. Pp. 19-27 in Biodiversity and management of the Madrean Archipelago: the sky islands of southwestern United States and northwestern Mexico (L. F. DeBano, P. F. Ffolliott, A. Ortega-Rubio, G. J. Gottfried, R. H. Hamre, and C. B. Edminster, technical coordinators). United States Department of Agriculture Forest Service, General Technical Report RM GTR 264:1-669.
    • (1995) Biodiversity and Management of the Madrean Archipelago: The Sky Islands of Southwestern United States and Northwestern Mexico , pp. 19-27
    • Bye, R.1
  • 17
    • 84898868888 scopus 로고    scopus 로고
    • COMISION NACIONAL DE AREAS NATURALES PROTEGIDAS (CONANP)́, Accessed 19 June 2013
    • COMISION NACIONAL DE AREAS NATURALES PROTEGIDAS (CONANP). ́ 2013a. Areas protegidas decretadas. www.conanp.gob.mx/que-hacemos. Accessed 19 June 2013.
    • (2013) Areas Protegidas Decretadas
  • 19
    • 78649501228 scopus 로고    scopus 로고
    • Testing species boundaries in Pardosa sierra (Araneae: Lycosidae) using female morphology and COI mtDNA
    • CORREA-RAḾIREZ, M. M., M. L. JIMÉNEZ, AND GARĆIA-DE LEÓ N. F. J. 2010. Testing species boundaries in Pardosa sierra (Araneae: Lycosidae) using female morphology and COI mtDNA. Journal of Arachnology 38:538-554.
    • (2010) Journal of Arachnology , vol.38 , pp. 538-554
    • Correa-Raḿirez, M.M.1    Jiménez, M.L.2    Leó, G.3    Garćia-De Leó, N.F.J.4
  • 21
    • 77956463263 scopus 로고    scopus 로고
    • Population history, phylogeography, and conservation genetics of the last Neotropical mega-herbivore, the lowland tapir (Tapirus terrestris)
    • DE THOISY, B., ET AL. 2010. Population history, phylogeography, and conservation genetics of the last Neotropical mega-herbivore, the lowland tapir (Tapirus terrestris). BMC Evolutionary Biology 10:278.
    • (2010) BMC Evolutionary Biology , vol.10 , pp. 278
    • De Thoisy, B.1
  • 23
    • 0036900038 scopus 로고    scopus 로고
    • A simulated annealing approach to define the genetic structure of populations
    • DUPANLOUP, I., S. SCHNEIDER, AND L. EXCOFFIER. 2002. A simulated annealing approach to define the genetic structure of populations. Molecular Ecology 11:2571-2581.
    • (2002) Molecular Ecology , vol.11 , pp. 2571-2581
    • Dupanloup, I.1    Schneider, S.2    Excoffier, L.3
  • 25
    • 58249117394 scopus 로고    scopus 로고
    • American Museum of Natural History, Center for Biodiversity and Conservation. biodiversityinformatics. amnh.org/open--source/gdmg. Accessed 15 December 2012
    • ERSTS, P. J. 2012. Geographic Distance Matrix Generator (version 1.2.3). American Museum of Natural History, Center for Biodiversity and Conservation. biodiversityinformatics.amnh.org/open--source/gdmg. Accessed 15 December 2012.
    • (2012) Geographic Distance Matrix Generator (Version 1.2.3)
    • Ersts, P.J.1
  • 26
    • 1642388330 scopus 로고    scopus 로고
    • Patterns of DNA sequence diversity and genetic structure after a range expansion: Lessons from the infinite-island model
    • EXCOFFIER, L. 2004. Patterns of DNA sequence diversity and genetic structure after a range expansion: lessons from the infinite-island model. Molecular Ecology 13:853-864.
    • (2004) Molecular Ecology , vol.13 , pp. 853-864
    • Excoffier, L.1
  • 27
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver. 3.5: A new series of programs to perform population genetics analyses under Linux and Windows
    • EXCOFFIER, L., AND H. L. LISCHER. 2010. Arlequin suite ver. 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources 10:564-567.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.L.2
  • 28
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial-DNA restriction data
    • EXCOFFIER L., SMOUSE., P. E. AND J. M. QUATTRO. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial-DNA restriction data. Genetics 131:479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 29
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • FU, Y. X. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147:915-925.
    • (1997) Genetics , vol.147 , pp. 915-925
    • Fu, Y.X.1
  • 30
    • 84876995665 scopus 로고    scopus 로고
    • A checklist of the mammals (Mammalia) from Durango, western Mexico
    • GARĆIA-MENDOZA, D. F., AND C. LÓPEZ-GONZÁLEZ. 2013. A checklist of the mammals (Mammalia) from Durango, western Mexico. Check List 9:313-322.
    • (2013) Check List , vol.9 , pp. 313-322
    • Garćia-Mendoza, D.F.1    López-González, C.2
  • 35
    • 79551537856 scopus 로고    scopus 로고
    • Southward Pleistocene migration of Douglas fir into Mexico: Phylogeography, ecological niche modeling, and conservation of "rear edge" populations
    • GUGGER, P. F., A. GONZÁLEZ-RODŔIGUEZ, H. RODŔIGUEZ-CORREA, S. SUGITA, AND J. CAVENDER-BARES. 2011. Southward Pleistocene migration of Douglas fir into Mexico: phylogeography, ecological niche modeling, and conservation of "rear edge" populations. New Phytologist 189:1185-1199.
    • (2011) New Phytologist , vol.189 , pp. 1185-1199
    • Gugger, P.F.1    González-Rodŕiguez, A.2    Rodŕiguez-Correa, H.3    Sugita, S.4    Cavender-Bares, J.5
  • 36
    • 0028484009 scopus 로고
    • Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution
    • HARPENDING, H. C. 1994. Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Human Biology 66:591-600.
    • (1994) Human Biology , vol.66 , pp. 591-600
    • Harpending, H.C.1
  • 37
    • 33644858749 scopus 로고    scopus 로고
    • A step by step guide to phylogeny reconstruction
    • HARRISON, C. J., AND J. A. LANGDALE. 2006. A step by step guide to phylogeny reconstruction. Plant Journal 45:561-572.
    • (2006) Plant Journal , vol.45 , pp. 561-572
    • Harrison, C.J.1    Langdale, J.A.2
  • 38
    • 0029860602 scopus 로고    scopus 로고
    • Some genetic consequences of ice ages, and their role in divergence and speciation
    • HEWITT, G. M. 1996. Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnean Society 58:247-276.
    • (1996) Biological Journal of the Linnean Society , vol.58 , pp. 247-276
    • Hewitt, G.M.1
  • 39
    • 0026709389 scopus 로고
    • Estimation of levels of gene flow from DNA sequence data
    • HUDSON, R. R., M. SLATKIN, AND W. P. MADDISON. 1992. Estimation of levels of gene flow from DNA sequence data. Genetics 132:583-589.
    • (1992) Genetics , vol.132 , pp. 583-589
    • Hudson, R.R.1    Slatkin, M.2    Maddison, W.P.3
  • 42
    • 26944473282 scopus 로고    scopus 로고
    • Cryptic Neogene vicariance and Quaternary dispersal of the red-spotted toad (Bufo punctatus): Insights on the evolution of North American warm desert biotas
    • JAEGER, J. R., B. R. RIDDLE, AND D. F. BRADFORD. 2005. Cryptic Neogene vicariance and Quaternary dispersal of the red-spotted toad (Bufo punctatus): insights on the evolution of North American warm desert biotas. Molecular Ecology 14:3033-3048.
    • (2005) Molecular Ecology , vol.14 , pp. 3033-3048
    • Jaeger, J.R.1    Riddle, B.R.2    Bradford, D.F.3
  • 43
    • 33747069355 scopus 로고    scopus 로고
    • Decoupled mitochondrial and chloroplast DNA population structure reveals Holocene collapse and population isolation in a threatened Mexican-endemic conifer
    • JARAMILLO-CORREA, J. P., J. BEAULIEU, F. T. LEDIG, AND J. BOUSQUET. 2006. Decoupled mitochondrial and chloroplast DNA population structure reveals Holocene collapse and population isolation in a threatened Mexican-endemic conifer. Molecular Ecology 15:2787-2800.
    • (2006) Molecular Ecology , vol.15 , pp. 2787-2800
    • Jaramillo-Correa, J.P.1    Beaulieu, J.2    Ledig, F.T.3    Bousquet, J.4
  • 44
    • 2542503875 scopus 로고    scopus 로고
    • New mitochondrial DNA data affirm the importance of Pleistocene speciation in North American birds
    • JOHNSON, N. K., AND C. CICERO. 2004. New mitochondrial DNA data affirm the importance of Pleistocene speciation in North American birds. Evolution 58:1122-1130.
    • (2004) Evolution , vol.58 , pp. 1122-1130
    • Johnson, N.K.1    Cicero, C.2
  • 45
    • 21344438634 scopus 로고    scopus 로고
    • Last Glacial Maximum equilibrium line altitudes in the circum-Caribbean (Mexico, Guatemala, Costa Rica, Colombia, and Venezuela)
    • LACHNIET, M. S., AND L. VÁ ZQUEZ-SELEM. 2005. Last Glacial Maximum equilibrium line altitudes in the circum-Caribbean (Mexico, Guatemala, Costa Rica, Colombia, and Venezuela). Quaternary International 138-139:129-144.
    • (2005) Quaternary International , vol.138-139 , pp. 129-144
    • Lachniet, M.S.1    Vázquez-Selem, L.2
  • 46
    • 0015427346 scopus 로고
    • Chromosomal variation in certain populations of Peromyscus boylii and its systematic implications
    • LEE, M. R., D. J. SCHMIDLY, AND C. C. HUHEEY. 1972. Chromosomal variation in certain populations of Peromyscus boylii and its systematic implications. Journal of Mammalogy 53:697-707.
    • (1972) Journal of Mammalogy , vol.53 , pp. 697-707
    • Lee, M.R.1    Schmidly, D.J.2    Huheey, C.C.3
  • 47
    • 0041335595 scopus 로고    scopus 로고
    • Genetic footprints of demographic expansion in North America, but not Amazonia, during the late Quaternary
    • LESSA, E. P., J. A. COOK, AND J. L. PATTON. 2003. Genetic footprints of demographic expansion in North America, but not Amazonia, during the late Quaternary. Proceedings of the National Academy of Sciences, USA 100:10331-10334.
    • (2003) Proceedings of the National Academy of Sciences, USA , vol.100 , pp. 10331-10334
    • Lessa, E.P.1    Cook, J.A.2    Patton, J.L.3
  • 48
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
    • LIBRADO, P., AND J. ROZAS. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinfor-matics 25:1451-1452.
    • (2009) Bioinfor-matics , vol.25 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 49
    • 0343402879 scopus 로고
    • Atlas of United States trees
    • United States Department of Agriculture Miscellaneous Publication 1146, 200 maps
    • LITTLE, E. L., JR. 1971. Atlas of United States trees. Vol. 1. Conifers and important hardwoods. United States Department of Agriculture Miscellaneous Publication 1146:1-9 200 maps.
    • (1971) Conifers and Important Hardwoods , vol.1 , pp. 1-9
    • Little Jr., E.L.1
  • 50
    • 84859580139 scopus 로고
    • Atlas of United States trees
    • United States Department of Agriculture Miscellaneous Publication 1314, 290 maps
    • LITTLE, E. L., JR. 1976. Atlas of United States trees. Vol. 3. Minor western hardwoods. United States Department of Agriculture Miscellaneous Publication 1314:1-13 290 maps.
    • (1976) Minor Western Hardwoods , vol.3 , pp. 1-13
    • Little Jr., E.L.1
  • 51
    • 84859580139 scopus 로고
    • Atlas of United States trees
    • United States Department of Agriculture Miscellaneous Publication 1342, 230 maps
    • LITTLE, E. L., JR. 1977. Atlas of United States trees. Vol. 4. Minor eastern hardwoods. United States Department of Agriculture Miscellaneous Publication 1342:1-17 230 maps.
    • (1977) Minor Eastern Hardwoods , vol.4 , pp. 1-17
    • Little Jr., E.L.1
  • 52
    • 84870359904 scopus 로고    scopus 로고
    • A checklist of the mammals (Mammalia) of Chihuahua Mexico
    • LÓPEZ-GONZÁLEZ, C., AND D. F. GARĆIA-MENDOZA. 2012. A checklist of the mammals (Mammalia) of Chihuahua Mexico. Check List 8:1122-1133.
    • (2012) Check List , vol.8 , pp. 1122-1133
    • López-González, C.1    Garćia-Mendoza, D.F.2
  • 53
    • 84882352081 scopus 로고    scopus 로고
    • Morphologic and morphometric characterization of Peromyscus schmidlyi (Rodentia: Cricetidae), an endemic of the Sierra Madre Occidental, Mexico
    • LÓPEZ-GONZÁLEZ, C., D. F. GARĆIA-MENDOZA, AND M. M. CORREA-RAḾIREZ. 2013. Morphologic and morphometric characterization of Peromyscus schmidlyi (Rodentia: Cricetidae), an endemic of the Sierra Madre Occidental, Mexico. Journal of Mammalogy 94:923-937.
    • (2013) Journal of Mammalogy , vol.94 , pp. 923-937
    • López-González, C.1    Garćia-Mendoza, D.F.2    Correa-Raḿirez, M.M.3
  • 54
    • 18844460693 scopus 로고    scopus 로고
    • A high-elevation Holocene pollen record from Iztacćihuatl volcano, central Mexico
    • LOZANO-GARĆIA, S., AND L. VÁZQUEZ-SELEM. 2005. A high-elevation Holocene pollen record from Iztacćihuatl volcano, central Mexico. Holocene 15:329-338.
    • (2005) Holocene , vol.15 , pp. 329-338
    • Lozano-Garćia, S.1    Vázquez-Selem, L.2
  • 55
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • MANTEL, N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Research 27:209-220.
    • (1967) Cancer Research , vol.27 , pp. 209-220
    • Mantel, N.1
  • 57
  • 59
    • 43049127444 scopus 로고    scopus 로고
    • Speciation in the highlands of Mexico: Genetic and phenotypic divergence in the Mexican jay (Aphelocoma ultra-marina)
    • MCCORMACK, J. E., A. T. PETERSON, E. BONACCORSO, AND T. B. SMITH. 2008. Speciation in the highlands of Mexico: genetic and phenotypic divergence in the Mexican jay (Aphelocoma ultra-marina). Molecular Ecology 17:2505-2521.
    • (2008) Molecular Ecology , vol.17 , pp. 2505-2521
    • McCormack, J.E.1    Peterson, A.T.2    Bonaccorso, E.3    Smith, T.B.4
  • 60
    • 0027883122 scopus 로고
    • Phytogeography and history of the alpine-subalpine flora of northeastern Mexico
    • (T. P. Ramamoorthy, R. Bye, A. Lot, and J. Fa, eds.). Oxford University Press, Oxford, United Kingdom
    • MCDONALD, J. A. 1993. Phytogeography and history of the alpine-subalpine flora of northeastern Mexico. Pp. 681-703 in Biological diversity of Mexico: origins and distribution (T. P. Ramamoorthy, R. Bye, A. Lot, and J. Fa, eds.). Oxford University Press, Oxford, United Kingdom.
    • (1993) Biological Diversity of Mexico: Origins and Distribution , pp. 681-703
    • McDonald, J.A.1
  • 61
    • 0001914021 scopus 로고
    • The North American Central Plains as an isolating agent in bird speciation
    • (W. Dort, Jr., and J. Knox Jones, Jr., eds.). Department of Geology Special Publication 3, University of Kansas, Lawrence
    • MENGEL, R. M. 1970. The North American Central Plains as an isolating agent in bird speciation. Pp. 279-340 in Pleistocene and Recent environments of the Central Great Plains (W. Dort, Jr., and J. Knox Jones, Jr., eds.). Department of Geology Special Publication 3, University of Kansas, Lawrence.
    • (1970) Pleistocene and Recent Environments of the Central Great Plains , pp. 279-340
    • Mengel, R.M.1
  • 62
    • 33749016771 scopus 로고    scopus 로고
    • Late Quaternary environments of the northern deserts and Central Transvolcanic Belt of Mexico
    • METCALFE, S. E. 2006. Late Quaternary environments of the northern deserts and Central Transvolcanic Belt of Mexico. Annals of the Missouri Botanical Garden 93:258-273.
    • (2006) Annals of the Missouri Botanical Garden , vol.93 , pp. 258-273
    • Metcalfe, S.E.1
  • 63
    • 84868122886 scopus 로고    scopus 로고
    • Adaptive color polymorphism and unusually high local genetic diversity in the side-blotched lizard Uta stansburiana
    • MICHELETTI, S., E. PARRA, AND E. J. ROUTMANI. 2012. Adaptive color polymorphism and unusually high local genetic diversity in the side-blotched lizard, Uta stansburiana. PLoS ONE 7(10):e47694.
    • (2012) PLoS ONE , vol.7 , Issue.10
    • Micheletti, S.1    Parra, E.2    Routmani, E.J.3
  • 64
    • 0032904342 scopus 로고    scopus 로고
    • MANTEL-SRUCT: A program for the detection of genetic structure via Mantel tests
    • MILLER, M. P. 1999. MANTEL-SRUCT: a program for the detection of genetic structure via Mantel tests. Journal of Heredity 90:258-259.
    • (1999) Journal of Heredity , vol.90 , pp. 258-259
    • Miller, M.P.1
  • 65
    • 27944474394 scopus 로고    scopus 로고
    • Alleles in Space (AIS). A computer program for the joint analysis of interindividual spatial and genetic information
    • MILLER, M. P. 2005. Alleles in Space (AIS). A computer program for the joint analysis of interindividual spatial and genetic information. Journal of Heredity 96:722-723.
    • (2005) Journal of Heredity , vol.96 , pp. 722-723
    • Miller, M.P.1
  • 66
    • 84867769136 scopus 로고    scopus 로고
    • General lack of phylogeographic structure in two sympatric forest obligate squirrels (Sciurus niger and S. Carolinensis)
    • MONCRIEF, N. D., J. B. LACK, J. E. MALDONADO, K. L. BRYANT, C. W. EDWARDS, AND R. A. VAN DEN BUSSCHE. 2012. General lack of phylogeographic structure in two sympatric, forest obligate squirrels (Sciurus niger and S. carolinensis). Journal of Mammalogy 93:1247-1264.
    • (2012) Journal of Mammalogy , vol.93 , pp. 1247-1264
    • Moncrief, N.D.1    Lack, J.B.2    Maldonado, J.E.3    Bryant, K.L.4    Edwards, C.W.5    Bussche Den Van, R.A.6
  • 68
    • 57549101385 scopus 로고    scopus 로고
    • Phylogeographic structure of Pinus strobiformis Engelm across the Chihuahuan Desert filter-barrier
    • MORENO-LETELIER, A., AND D. PIÑERO. 2009. Phylogeographic structure of Pinus strobiformis Engelm. across the Chihuahuan Desert filter-barrier. Journal of Biogeography 36:121-131.
    • (2009) Journal of Biogeography , vol.36 , pp. 121-131
    • Moreno-Letelier, A.1    Piñero, D.2
  • 69
    • 33746241064 scopus 로고    scopus 로고
    • Hacia una śintesis biogeográfica de México
    • MORRONE, J. J. 2005. Hacia una śintesis biogeográfica de México. Revista Mexicana de Biodiversidad 76:207-252.
    • (2005) Revista Mexicana de Biodiversidad , vol.76 , pp. 207-252
    • Morrone, J.J.1
  • 70
    • 79551519640 scopus 로고    scopus 로고
    • Peromyscus schmidlyi (Rodentia: Cricetidae)
    • ORDÓ Ñ EZ-GARZA, N., AND R. D. BRADLEY. 2011. Peromyscus schmidlyi (Rodentia: Cricetidae). Mammalian Species 872:31-36.
    • (2011) Mammalian Species , vol.872 , pp. 31-36
    • Ñ, O.1    Ez-Garza, N.2    Bradley, R.D.3
  • 71
    • 0001829453 scopus 로고    scopus 로고
    • Nucleic acids II: The polymerase chain reaction
    • (D. M. Hillis, G. Moritz, and B. K. Mable, eds.), Sinauer Associates, Inc., Publishers, Sunder-land, Massachusetts
    • PALUMBI, S. R. 1996. Nucleic acids II: the polymerase chain reaction. Pp. 205-247 in Molecular systematics (D. M. Hillis, G. Moritz, and B. K. Mable, eds.). Sinauer Associates, Inc., Publishers, Sunder-land, Massachusetts.
    • (1996) Molecular Systematics , pp. 205-247
    • Palumbi, S.R.1
  • 72
    • 0032510681 scopus 로고    scopus 로고
    • Application of a time-dependent coalescence process for inferring the history of population size changes from DNA sequence data. Proceedings of the National
    • Academy of Science
    • POLANSKI, A., M. KIMMEL, AND R. CHAKRABORTY. 1998. Application of a time-dependent coalescence process for inferring the history of population size changes from DNA sequence data. Proceedings of the National Academy of Science, USA 95:5456-5461.
    • (1998) USA , vol.95 , pp. 5456-5461
    • Polanski, A.1    Kimmel, M.2    Chakraborty, R.3
  • 73
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • POSADA, D., AND K. A. CRANDALL. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 74
    • 45849152057 scopus 로고    scopus 로고
    • Accessed 7 February 2013
    • RAMBAUT, A., AND A. J. DRUMMOND. 2007. Tracer v. 1.4. http://beast. bio.ed.ac.uk/Tracer. Accessed 7 February 2013.
    • (2007) Tracer V. 1.4
    • Rambaut, A.1    Drummond, A.J.2
  • 75
    • 0029818407 scopus 로고    scopus 로고
    • Probability distribution of molecular evolutionary trees: A new method of phylogenetic inference
    • RANNALA, B., AND Z. YANG. 1996. Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. Journal of Molecular Evolution 43:304-311.
    • (1996) Journal of Molecular Evolution , vol.43 , pp. 304-311
    • Rannala, B.1    Yang, Z.2
  • 76
    • 0033678106 scopus 로고    scopus 로고
    • Phylogeography and systematics of the Peromyscus eremicus species group and the historical biogeography of North American warm regional deserts
    • RIDDLE, B. R., D. J. HAFNER, AND L. F. ALEXANDER. 2000. Phylogeography and systematics of the Peromyscus eremicus species group and the historical biogeography of North American warm regional deserts. Molecular Phylogenetics and Evolution 17:145-160.
    • (2000) Molecular Phylogenetics and Evolution , vol.17 , pp. 145-160
    • Riddle, B.R.1    Hafner, D.J.2    Alexander, L.F.3
  • 78
    • 0000621581 scopus 로고
    • Genetic evidence for a Pleistocene population explosion
    • ROGERS, A. R. 1995. Genetic evidence for a Pleistocene population explosion. Evolution 49:608-615.
    • (1995) Evolution , vol.49 , pp. 608-615
    • Rogers, A.R.1
  • 79
    • 0026548159 scopus 로고
    • Population growth makes waves in the distribution of pairwise genetic differences
    • ROGERS, A. R., AND H. HARPENDING. 1992. Population growth makes waves in the distribution of pairwise genetic differences. Molecular Biology and Evolution 13:552-569.
    • (1992) Molecular Biology and Evolution , vol.13 , pp. 552-569
    • Rogers, A.R.1    Harpending, H.2
  • 80
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • RONQUIST, F., AND J. P. HUELSENBECK. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 81
    • 68049133091 scopus 로고    scopus 로고
    • DNA sequence polymorphism analysis using DnaSP
    • (D. Posada, ed.). Methods in Molecular Biology Series, Humana Press, Clifton, New Jersey
    • ROZAS, J. 2009. DNA sequence polymorphism analysis using DnaSP. Pp. 337-350 in Bioinformatics for DNA sequence analysis (D. Posada, ed.). Methods in Molecular Biology Series Vol. 537. Humana Press, Clifton, New Jersey.
    • (2009) Bioinformatics for DNA Sequence Analysis , vol.537 , pp. 337-350
    • Rozas, J.1
  • 82
    • 0004283651 scopus 로고
    • Limusa, México, Distrito Federal, México
    • RZEDOWSKI, J. 1978. Vegetación de México. Limusa, México, Distrito Federal, México.
    • (1978) Vegetación de México
    • Rzedowski, J.1
  • 83
    • 79955032431 scopus 로고    scopus 로고
    • Comparative phylogeography of red maple (Acer rubrum L.) and silver maple (Acer saccharinum L.): Impacts of habitat specialization, hybridization and glacial history
    • SAEKI, I., C. W. DICK, B. V. BARNES, AND N. MURAKAMI. 2011. Comparative phylogeography of red maple (Acer rubrum L.) and silver maple (Acer saccharinum L.): impacts of habitat specialization, hybridization and glacial history. Journal of Biogeography 38:992-1005.
    • (2011) Journal of Biogeography , vol.38 , pp. 992-1005
    • Saeki, I.1    Dick, C.W.2    Barnes, B.V.3    Murakami, N.4
  • 84
    • 0003511282 scopus 로고
    • SAS INSTITUTE INC, Release 6.11. SAS Institute Inc., Cary, North Carolina
    • SAS INSTITUTE INC. 1995. The SAS system for Windows. Release 6.11. SAS Institute Inc., Cary, North Carolina.
    • (1995) The SAS System for Windows
  • 85
    • 0007577081 scopus 로고
    • Karyotypic variation in Peromyscus boylii (Rodentia: Cricetidae) from Mexico and corresponding taxonomic implications
    • SCHMIDLY, D. J., AND G. L. SCHROETER. 1974. Karyotypic variation in Peromyscus boylii (Rodentia: Cricetidae) from Mexico and corresponding taxonomic implications. Systematic Zoology 23:333-342.
    • (1974) Systematic Zoology , vol.23 , pp. 333-342
    • Schmidly, D.J.1    Schroeter, G.L.2
  • 86
    • 0032814604 scopus 로고    scopus 로고
    • Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: Application to human mitochondrial DNA
    • SCHNEIDER, S., AND L. EXCOFFIER. 1999. Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: application to human mitochondrial DNA. Genetics 152:1079-1089.
    • (1999) Genetics , vol.152 , pp. 1079-1089
    • Schneider, S.1    Excoffier, L.2
  • 87
    • 79951899359 scopus 로고    scopus 로고
    • Guidelines of the American Society of Mammalogists for the use of wild mammals in research
    • AND THE ANIMAL CARE AND USE COMMITTEE OF THE AMERICAN SOCIETY OF MAMMALOGISTS
    • SIKES, R. S., W. L. GANNON, AND THE ANIMAL CARE AND USE COMMITTEE OF THE AMERICAN SOCIETY OF MAMMALOGISTS. 2011. Guidelines of the American Society of Mammalogists for the use of wild mammals in research. Journal of Mammalogy 92:235-253.
    • (2011) Journal of Mammalogy , vol.92 , pp. 235-253
    • Sikes, R.S.1    Gannon, W.L.2
  • 89
    • 0000392112 scopus 로고
    • Isolation by distance in equilibrium and nonequilibrium populations
    • SLATKIN, M. 1993. Isolation by distance in equilibrium and nonequilibrium populations. Evolution 47:264-279.
    • (1993) Evolution , vol.47 , pp. 264-279
    • Slatkin, M.1
  • 90
    • 0025951996 scopus 로고
    • Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations
    • SLATKIN, M., AND R. R. HUDSON. 1991. Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. Genetics 129:555-562.
    • (1991) Genetics , vol.129 , pp. 555-562
    • Slatkin, M.1    Hudson, R.R.2
  • 91
    • 0003151432 scopus 로고    scopus 로고
    • Phylogenetic relationships and the radiation of sigmodontine rodents in South America: Evidence from cytochrome b
    • SMITH, M. F., AND J. L. PATTON. 1999. Phylogenetic relationships and the radiation of sigmodontine rodents in South America: evidence from cytochrome b. Journal of Mammalian Evolution 6:89-128.
    • (1999) Journal of Mammalian Evolution , vol.6 , pp. 89-128
    • Smith, M.F.1    Patton, J.L.2
  • 92
    • 34047166418 scopus 로고    scopus 로고
    • Phylogeography of the white-breasted nuthatch (Sitta carolinensis): Diversification in North American pine and oak woodlands
    • SPELLMAN, G. M., AND J. KLICKA. 2007. Phylogeography of the white-breasted nuthatch (Sitta carolinensis): diversification in North American pine and oak woodlands. Molecular Ecology 16:1729-1740.
    • (2007) Molecular Ecology , vol.16 , pp. 1729-1740
    • Spellman, G.M.1    Klicka, J.2
  • 93
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • STAMATAKIS, A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 94
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML web servers
    • STAMATAKIS, A., P. HOOVER, AND J. ROUGEMONT. 2008. A rapid bootstrap algorithm for the RAxML web servers. Systematic Biology 57:758-771.
    • (2008) Systematic Biology , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 96
    • 0031224772 scopus 로고    scopus 로고
    • Biogeography and molecular systematics of the Peromyscus aztecus group
    • SULLIVAN, J., J. A. MARKERT, AND C. W. KILPATRICK. 1997. Biogeography and molecular systematics of the Peromyscus aztecus group. Systematic Biology 46:426-440.
    • (1997) Systematic Biology , vol.46 , pp. 426-440
    • Sullivan, J.1    Markert, J.A.2    Kilpatrick, C.W.3
  • 97
    • 0021066244 scopus 로고
    • Evolutionary relationships of DNA sequences in finite populations
    • TAJIMA, F. 1983. Evolutionary relationships of DNA sequences in finite populations. Genetics 105:437-460.
    • (1983) Genetics , vol.105 , pp. 437-460
    • Tajima, F.1
  • 98
    • 0024762773 scopus 로고
    • The effect of change in population-size on DNA polymorphism
    • TAJIMA, F. 1989. The effect of change in population-size on DNA polymorphism. Genetics 123:597-601.
    • (1989) Genetics , vol.123 , pp. 597-601
    • Tajima, F.1
  • 99
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • TAMURA, K., D. PETERSON, N. PETERSON, G. STECHER, M. NEI, AND S. KUMAR. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28:2731-2739
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 100
    • 84898863447 scopus 로고    scopus 로고
    • THE MATHWORKS INC, The MathWorks Inc., Natick, Massachusetts
    • THE MATHWORKS INC. 2010. Matlab for Windows ver. 7.10.0.499 (R2010a). The MathWorks Inc., Natick, Massachusetts.
    • (2010) Matlab for Windows Ver. 7.10.0.499 (R2010a)
  • 101
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • THOMPSON, J. D., T. J. GIBSON, F. PLEWNIECK, F. JEANMOUGIN, AND D. G. HIGGINS. 1997. The Clustal X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 25:4876-4882
    • (1997) Nucleic Acids Research , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewnieck, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 102
    • 0002325170 scopus 로고
    • Pleistocene changes in vegetation in tropical Mexico
    • (G. T. Prance, ed.). Columbia University Press, New York
    • TOLEDO, V. M. 1982. Pleistocene changes in vegetation in tropical Mexico. Pp. 93-111 in Biological diversification in the tropics (G. T. Prance, ed.). Columbia University Press, New York.
    • (1982) Biological Diversification in the Tropics , pp. 93-111
    • Toledo, V.M.1
  • 103
    • 0000123230 scopus 로고
    • Vegetation history in the Southwest: The nature and timing of the late Wisconsin-Holocene transition
    • (W. F. Ruddiman and H. E. Wright, Jr., eds.), Geological Society of America, Boulder, Colorado
    • VAN DEVENDER, T. R., R. S. THOMPSON, AND J. L. BETANCOURT. 1987. Vegetation history in the Southwest: the nature and timing of the late Wisconsin-Holocene transition. Pp. 323-352 in North America and adjacent oceans during the last deglaciation (W. F. Ruddiman and H. E. Wright, Jr., eds.). Geological Society of America, Boulder, Colorado.
    • (1987) North America and Adjacent Oceans during the Last Deglaciation , pp. 323-352
    • Van Devender, T.R.1    Thompson, R.S.2    Betancourt, J.L.3
  • 104
    • 0043123111 scopus 로고    scopus 로고
    • RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences
    • WERNERSSON, R., AND A. G. PEDERSEN. 2003. RevTrans: multiple alignment of coding DNA from aligned amino acid sequences. Nucleic Acids Research 31:3537-3539.
    • (2003) Nucleic Acids Research , vol.31 , pp. 3537-3539
    • Wernersson, R.1    Pedersen, A.G.2
  • 105
    • 80052537331 scopus 로고    scopus 로고
    • Refugial isolation and divergence in the narrowheaded gartersnake species complex (Thamnophis rufipunctatus) as revealed by multilocus DNA sequence data
    • WOOD, D. A., A. G. VANDERGAST, J. A. LEMOS-ESPINAL, R. N. FISHER, AND A. T. HOLYCROSS. 2011. Refugial isolation and divergence in the narrowheaded gartersnake species complex (Thamnophis rufipunctatus) as revealed by multilocus DNA sequence data. Molecular Ecology 20:3856-3878.
    • (2011) Molecular Ecology , vol.20 , pp. 3856-3878
    • Wood, D.A.1    Vandergast, A.G.2    Lemos-Espinal, J.A.3    Fisher, R.N.4    Holycross, A.T.5
  • 106
    • 84890417804 scopus 로고
    • The genetical structure of populations
    • WRIGHT, S. 1951. The genetical structure of populations. Annals of Eugenics 15:323-354.
    • (1951) Annals of Eugenics , vol.15 , pp. 323-354
    • Wright, S.1
  • 107
    • 0000862605 scopus 로고
    • The interpretation of population structure by F-statistics with special regard to systems of mating
    • WRIGHT, S. 1965. The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution 19:395-420.
    • (1965) Evolution , vol.19 , pp. 395-420
    • Wright, S.1
  • 108
    • 78649661858 scopus 로고    scopus 로고
    • Assessing substitution saturation with DAMBE
    • (Lemey, P. Salemi, M. and Vandamme, Anne-Mieke eds.). 2nd ed. Cambridge, University Press, Cambridge, United Kingdom
    • XIA, X., AND P. LEMEY. 2009. Assessing substitution saturation with DAMBE. Pp. 615-630 in The phylogenetic handbook: a practical approach to DNA and protein phylogeny (Lemey, P. Salemi, M. and Vandamme, Anne-Mieke eds.). 2nd ed. Cambridge University Press, Cambridge, United Kingdom.
    • (2009) The Phylogenetic Handbook: A Practical Approach to DNA and Protein Phylogeny , pp. 615-630
    • Xia, X.1    Lemey, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.