Temporal diversification of Mesoamerican cichlid fishes across a major biogeographic boundary

Molecular Phylogenetics and Evolution

Volumn 31, Issue 2, 2004, Pages 754-764

  Hulsey, C Darrin ^a   García De León, Francisco J ^b   Johnson, Yara Sánchez ^b   Hendrickson, Dean A ^c   Near, Thomas J ^a,d  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Inst Tecn de Cuidad Victoria   (Mexico)

^c UNIVERSITY OF TEXAS AT AUSTIN   (United States)

^d UNIVERSITY OF TENNESSEE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANURA; BUFO; CICHLIDAE; HERICHTHYS; PARANEETROPLUS; PARATHERAPS; PISCES; VERTEBRATA;

EID: 1942517733     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ympev.2003.08.024     Document Type: Article

References (43)

1. Artigas-Azas. J.M., 1992. The "Cichlasoma" labridens-complex. In: Konings, A. (Ed.), The Cichlid Yearbook, vol. 2. Cichlid Press, St. Leon-Rot, Germany, pp. 65-70.
2. Baldwin, B.G., Sanderson, M.J., 1998. Age and rate of diversification of the Hawaiian silversword alliance. Proc. Natl. Acad. Sci. USA 95, 9402-9406.
3. Beard, J.H., Sangree, J.B., Smith, L.A., 1982. Quaternary chronology, paleoclimate, depositional sequences, and eustatic cycles. Am. Assoc. Petroleum Geol. Bull. 66, 158-169.
4. Bermingham, E., McCafferty, S.S., Martin, A., Kocher, P., 1997. Fish biogeography and molecular clocks: perspectives from the Panamanian Isthmus. In: Thomas, D., Stepien, C.A. (Eds.), Molecular Systematics of Fishes. Academic Press, London, pp. 113-128.
5. Bussing, W.A., 1975. Taxonomy and biological aspects of the Central American cichlid fish Ciclasoma seiboldii and C. tuba. Rev. Biol. Trop. 23, 189-211.
6. Byerly, G.R., 1991. Igneous activity. In: Salvador, A. (Ed.), The Gulf of Mexico Basin: The Geology of North America. J. Geol. Soc. Am., Boulder, pp. 91-108.
7. Conkel, D., 1993. Cichlids of North and Central America. T.F.H. Publications, Neptune, NJ.
8. Farias, I.P., Scneider, H., Sampaio, I., 1998. Molecular phylogeny of neotropical cichlids: the relationships of cichlasomines and heroines. In: Malabarba, L.R., Reis, R.E., Vari, R.P., Lucena, Z.M., Lucena, C.A.S. (Eds.), Phylogeny and Classification of Neotropical Fishes. Edipucrs, Puerto Alegre, Brazil, pp. 499-508.
9. Farias, I.P., Orti, G., Sampaio, I., Schneider, H., Meyer, A., 2001. The cytochrome b gene as a phylogenetic marker: the limits of resolution for analyzing relationships among cichlid fishes. J. Mol. Evol. 53, 89-103.
10. Felsenstein, J., 1985. Confidence limits on phytogenies: an approach using the bootstrap. Evolution 9, 783-791.
11. Felsenstein, J., 1993. PHYLIP (Phylogeny Inference Package) Version 3.57, University of Washington, Seattle.
12. Huelsenbeck, J.P., Ronquist, F., 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754-755.
13. Kullander, S.O., 1998. A phylogeny and classification of the South American Cichlidae (Teleostei: Perciformes). In: Malabarba, L.R., Reis, R.E., Vari, R.P., Lucena, Z.M., Lucena, C.A.S. (Eds.), Phylogeny and Classification of Neotropical Fishes. Edipucrs, Puerto Alegre, Brazil, pp. 461-498.
14. Kumazawa, Y., Yamaguchi, M., Nishida, M., 1999. Mitochondrial molecular clocks and the origin of euteleostean biodiversity: Familial radiation of perciforms may have predated the Cretaceous/Tertiary boundary. In: Ato, M. (Ed.), The Biology of Biodiversity. Springer-Verlag, Tokyo, pp. 35-52.
15. Kullander, S.O., 1983. A revision of the South American cichlid genus Cichlasoma (Teleostei: Cichlidae). Naturhistoriska Riksmuseet, Stockholm.
16. Lydeard, C., Roe, K.J., 1997. The phylogenetic utility of the mitochondrial cytochrome b gene for inferring relationships among actinopterygian fishes. In: Thomas, D., Stepien, C.A. (Eds.), Molecular Systematics of Fishes. Academic Press, New York, pp. 285-303.
17. Lydeard, C., Wooten, M.C., Meyer, A., 1995. Molecules, morphology, and area cladograms: a cladistic and biogeographic analysis of Gambusia(Teleostei: Poeciliidae). Syst. Biol. 44, 221-236.
18. Magallon, S., Sanderson, M.J., 2001. Absolute diversification rates in Angiosperm Clades. Evolution 55, 1762-1780.
19. Martin, A.P., Bermingham, E., 1998. Systematics and evolution of lower Central American cichlids inferred from analysis of cytochrome b gene sequences. Mol. Phylogenet. Evol. 9, 192-203.
20. Mateos, M., Sanjur, O.I., Vrijenhoek, R.C., 2002. Historical biogeography of the livebearing fish genus Poeciliopsis (Poeciliidae: Cyprinodontiformes). Evolution 56, 972-984.
21. Meyer, A., Kocher, T.D., Basasibwaki, P., Wilson, A.C., 1990. Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial DNA sequences. Nature 347, 550-553.
22. Meyer, A., 1994. Shortcomings of the cytochrome b gene as a molecular marker. TREE 9, 278-280.
23. Miller, R.R., 1966. Geographical distribution of Central American freshwater fishes. Copeia, 773-802.
24. Miller, R.R., 1986. Origin and geography of fishes of Central Mexico. In: Hocutt, C.H., Wiley, E.O. (Eds.), The Zoogeography of North American Freshwater Fishes. Wiley, New York, pp. 487-517.
25. Minckley, W., 1969. Environments of the Bolsón of Cuatro Cienegas, Coahuila, Mexico, with special reference to the aquatic biota. Univ. of Texas El Paso Sci. Ser. 2, 1-65.
26. Mulcahy, D.G., Mendelson III, J.R., 2000. Phylogeography and speciation of the morphologically variable, widespread species Bufo valliceps, based on molecular evidence from mtDNA. Mol. Phylogenet. Evol. 17, 173-189.
27. Near, T.J., Kassler, T.W., Koppleman, J.B., Dillman, C.B., Phillip, D.P., 2003. Speciation in North American black basses, Micropterus (Actinopterygii: Centrarchidae). Evolution 57, 1610-1621.
28. Obregon-Barboza, H., Contreras-Balderas, S., Lozano-Vilano, M.D.L., 1994. The fishes of northern and central Veracruz, Mexico. Hydrobiologia 286, 79-95.
29. Page, R.D.M., 1988. Quantitative cladistic biogeography: constructing and comparing area cladograms. Syst. Zool. 37, 254-270.
30. Page, R.D.M., 1990. Temporal congruence and cladistic analysis of biogeography and cospeciation. Syst. Zool. 39, 205-226.
31. Perdices, A., Bermingham, E., Montilla, A., Doadrio, I., 2002. Evolutionary history of the genus Rhamdia (Teleostei: Pimelodidae) in Central America. Mol. Phylogenet. Evol. 25, 172-189.
32. Pérez-Higaredera, G., Navarro, L.D., 1980. The faunistic districts of the low plains of Veracruz, Mexico, based on reptilian and mammalian data. Bull. Maryland Herpetol. Soc. 16, 54-69.
33. Posada, D., Crandall, K.A., 1998. MODEL TEST: testing the model of DNA substitution. Bioinformatics 14, 817-818.
34. Regan, C.T., 1905. A revision of the fishes of the American cichlid genus Cichlasoma and allied genera. Ann. Mag. Nat. Hist. (Ser. 7) 16, 60-77, 225-243, 316-340, 433-445.
35. Roe, K.J., Conkel, D., Lydeard, D.C., 1997. Molecular systematics of Middle American cichlid fishes and the evolution of trophic-types in 'Cichlasoma (Amphilophus)' and 'C. (Thorichthys)'. Mol. Phylogenet. Evol. 7, 366-376.
36. Rosen, D.E., 1978. Vicariant patterns and historical explanation in biogeograpy. Syst. Zool. 27, 159-188.
37. Sanderson, M.J., 1997. A nonparametric approach to estimating divergence times in the absence of rate constancy. Mol. Biol. Evol. 14, 1218-1231.
38. Slowinski, J.B., 2001. Molecular polytomies. Mol. Phylogenet. Evol. 19, 114-120.
39. Stiassny, M.L.J., 1991. Phylogenetic relationships of the family Cichlidae: an overview. In: Keenleyside, M.H.A. (Ed.), Cichlid Fishes: Behavior, Ecology, and Evolution. Chapman & Hall, London, pp. 1-18.
40. Swofford, D.L., 2002. PAUP*: Phylogenetic Analysis Using Parsimony (* and other methods) Beta Version 4.0. Sinauer, Sunderland, MA.
41. Taylor, J.N., Miller, R.R., 1983. Cichlid fishes (Genus Cichlasoma) of the Rio Pánuco basin, Eastern Mexico, with description of a new species. Occas. Pap. Mus. Nat. His. Univ. Kansas 104, 1-24.
42. Thompson, J.D., Plewniak, F., Poch, O., 1999. A comprehensive comparison of multiple sequence alignment programs. Nucleic Acids Res. 27, 2682-2690.
43. Verheyen, E., Salzburger, W., Snoeks, J., Meyer, A., 2003. The origin of the superflock of cichlid fishes from Lake Victoria, East Africa. Science 300, 325-329.