Application of a time-dependent coalescence process for inferring the history of population size changes from DNA sequence data

Proceedings of the National Academy of Sciences of the United States of America

Volumn 95, Issue 10, 1998, Pages 5456-5461

  Polanski, Andrzej ^a   Kimmel, Marek ^b   Chakraborty, Ranajit ^a  

^a UNIVERSITY OF TEXAS SCHOOL OF PUBLIC HEALTH   (United States)

^b Rice University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONFERENCE PAPER; DNA SEQUENCE; POPULATION; PREDICTION; PRIORITY JOURNAL; SIMULATION; STATISTICAL MODEL; THEORY;

EID: 0032510681     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.95.10.5456     Document Type: Article

References (27)

1. Kimura, M. (1971) Theor. Popul. Biol. 2, 174-208.
2. Kimura, M. & Ohta, T. (1975) Proc. Natl. Acad. Sci. USA 72, 2761-2764.
3. Watterson, G. A. (1975) Theor. Popul. Biol. 7, 256-276.
4. Wehrhahn, C. F. (1975) Genetics 80, 375-394.
5. Li, W. H. (1977) Genetics 85, 331-337.
6. Tajima, F. (1989) Genetics 123, 597-601.
7. Chakraborty, R. & Nei, M. (1977) Evolution 31, 347-356.
8. Di Rienzo, A. & Wilson A. C. (1991) Proc. Natl. Acad. Sci. USA 88, 1596-1601.
9. Slatkin, M. & Hudson, R. R. (1991) Genetics 129, 555-562.
10. Rogers, A. R. & Harpending, H. C. (1992) Mol. Biol. Evol. 9, 552-569.
11. Rogers, A. R. (1995) Evolution 49, 608-615.
12. Rogers, A. R., Fraley, A. E., Bamshad, M. J., Watkins, W. S. & Jorde, L. B. (1996) Mol. Biol. Evol. 13, 895-902.
13. Bertorelle, G. & Slatkin, M. (1995) Mol. Biol. Evol. 12, 887-892.
14. Kimmel, M. & Chakraborty, R. (1996) Theor. Popul. Biol. 50, 345-367.
15. Cox, D. R. & Oakes, D. (1984) Analysis of Survival Data (Chapman & Hall, London).
16. Shohah, J. A. & Tamarkin, J. D. (1943) The Problem of Moments (Am. Math. Soc., New York).
17. Bellman, R., Kalaba, R. E. & Lockett, J. A. (1966) Numerical Inversion of the Laplace Transform (Elsevier, New York).
18. Kotz, S., Johnson, N. L. & Read, C. B. (1989) Encyclopedia of Statistics (Wiley Interscience, New York).
19. Barlow, R. E., Bartholomew, D. J., Bremner, J. M. & Brunk, H. D. (1972) Statistical Inference Under Order Restrictions (Wiley, New York).
20. Luenberger, D. G. (1972) Linear and Nonlinear Programming (Addison-Wesley, Reading, MA).
21. Cann, R. L., Stoneking, M. & Wilson, A. C. (1987) Nature (London) 325, 31-36.
22. Abramowitz, M. & Stegun, I. A. eds. (1972) Handbook of Mathematical Functions with Formulas Graphs and Mathematical Tables (U.S. Gov. Print. Off., Washington, DC).
23. Marjoram, P. & Donnelly, P. (1994) Genetics 136, 673-683.
24. Griffiths, R. C. & Tavaré, S. (1994) Phil. Trans. R. Soc. London B 344, 403-410.
25. Slatkin, M. (1995) Genetics 139, 457-462.
26. Kimmel, M., Chakraborty, R., Stivers, D. N. & Deka, R. (1996) Genetics 143, 549-555.
27. Pritchard, J. K. & Feldman, M. W. (1996) Theor. Popul. Biol. 50, 325-344.