메뉴 건너뛰기




Volumn 31, Issue 13, 2003, Pages 3537-3539

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; NUCLEOTIDE;

EID: 0043123111     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg609     Document Type: Article
Times cited : (427)

References (14)
  • 1
    • 0002164370 scopus 로고
    • Improved sensitivity of nucleic acid database searches using application-specific scoring matrices
    • States,D.J., Gish,W. and Altschul,S.F. (1991) Improved sensitivity of nucleic acid database searches using application-specific scoring matrices. Methods, 3, 66-70.
    • (1991) Methods , vol.3 , pp. 66-70
    • States, D.J.1    Gish, W.2    Altschul, S.F.3
  • 2
    • 0031960185 scopus 로고    scopus 로고
    • Synonymous and nonsynonymous rate variation in nuclear genes of mammals
    • Yang,Z. and Nielsen,R.J. (1998) Synonymous and nonsynonymous rate variation in nuclear genes of mammals. Mol. Evol., 46, 409-418.
    • (1998) Mol. Evol. , vol.46 , pp. 409-418
    • Yang, Z.1    Nielsen, R.J.2
  • 3
    • 0026458378 scopus 로고
    • Amino acid substitution matrices from protein blocks
    • Henikoff,S. and Henikoff,J.G. (1992) Amino acid substitution matrices from protein blocks. Proc. Natl Acad. Sci. USA, 89, 10915-10919.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 4
    • 0028303880 scopus 로고
    • An algorithm combining DNA and protein alignment
    • Hein,J. (1994) An algorithm combining DNA and protein alignment. J. Theor. Biol., 167, 169-174.
    • (1994) J. Theor. Biol. , vol.167 , pp. 169-174
    • Hein, J.1
  • 5
    • 0030004227 scopus 로고    scopus 로고
    • Combined DNA and protein alignment
    • Hein,J. and Støvlbæk,J. (1996) Combined DNA and protein alignment. Methods Enzymol., 266, 402-418.
    • (1996) Methods Enzymol. , vol.266 , pp. 402-418
    • Hein, J.1    Støvlbæk, J.2
  • 6
    • 0029933671 scopus 로고    scopus 로고
    • Effective protein sequence comparison
    • Pearson,W.R. (1996) Effective protein sequence comparison. Methods Enzymol., 266, 227-258.
    • (1996) Methods Enzymol. , vol.266 , pp. 227-258
    • Pearson, W.R.1
  • 9
    • 84877314552 scopus 로고    scopus 로고
    • Comparison of coding DNA
    • Proceedings of the 9th Annual Symposium on Combinatorial Pattern Matching (CPM). Lecture Notes in Computer Science, Rutgers University, NJ. Springer-Verlag, Berlin, Germany
    • Pedersen,C.N.S., Lyngsø,R.B. and Hein,J. (1998) Comparison of coding DNA. Proceedings of the 9th Annual Symposium on Combinatorial Pattern Matching (CPM). Lecture Notes in Computer Science, Rutgers University, NJ. Springer-Verlag, Berlin, Germany.
    • (1998)
    • Pedersen, C.N.S.1    Lyngsø, R.B.2    Hein, J.3
  • 10
    • 0033639150 scopus 로고    scopus 로고
    • Statistical methods for detecting molecular adaptation
    • Yang,Z. and Bielawski,B. (2000) Statistical methods for detecting molecular adaptation. Trends Ecol. Evol., 15, 496-503.
    • (2000) Trends Ecol. Evol. , vol.15 , pp. 496-503
    • Yang, Z.1    Bielawski, B.2
  • 11
    • 0033979433 scopus 로고    scopus 로고
    • Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
    • Yang,Z. and Nielsen,R. (2000) Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. Mol. Biol. Evol., 17, 32-43.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 32-43
    • Yang, Z.1    Nielsen, R.2
  • 12
    • 0032945593 scopus 로고    scopus 로고
    • DIALIGN 2: Improvement of the segment-to-segment approach to multiple sequence alignment
    • Morgenstern,B. (1999) DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment. Bioinformatics, 15, 211-218.
    • (1999) Bioinformatics , vol.15 , pp. 211-218
    • Morgenstern, B.1
  • 13
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 14
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson,J.D., Gibson,T.J., Plewniak,F., Jeanmougin,F. and Higgins,D.G. (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res., 24, 4876-4882.
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.