Phylogeography of the bark beetle Dendroctonus mexicanus Hopkins (Coleoptera: Curculionidae: Scolytinae)

Molecular Phylogenetics and Evolution

Volumn 49, Issue 3, 2008, Pages 930-940

  Anducho Reyes, Miguel A ^a   Cognato, Anthony I ^b   Hayes, Jane L ^c   Zúñiga, Gerardo ^a  

^a INSTITUTO POLITÉCNICO NACIONAL   (Mexico)

^b MICHIGAN STATE UNIVERSITY   (United States)

^c Pacific Northwest Research Station   (United States)

Author keywords

Dendroctonus mexicanus; Divergence time; Nested clade phylogeographic analysis; Nucleotide diversity; Range expansion

Indexed keywords

CYTOCHROME C OXIDASE; MITOCHONDRIAL DNA;

ANIMAL; ARTICLE; BAYES THEOREM; BEETLE; BIOLOGICAL MODEL; CLASSIFICATION; DNA SEQUENCE; GENE; GENETIC VARIABILITY; GENETICS; GENOME; GEOGRAPHY; GUATEMALA; HAPLOTYPE; MEXICO; MITOCHONDRIAL GENE; MITOCHONDRION; MOLECULAR EVOLUTION; PHYLOGENY; POPULATION GENETICS; SEQUENCE ALIGNMENT; SPECIES DIFFERENCE;

ANIMALS; BAYES THEOREM; BEETLES; DNA, MITOCHONDRIAL; ELECTRON TRANSPORT COMPLEX IV; EVOLUTION, MOLECULAR; GENES, INSECT; GENES, MITOCHONDRIAL; GENETIC VARIATION; GENETICS, POPULATION; GENOME, INSECT; GEOGRAPHY; GUATEMALA; HAPLOTYPES; MEXICO; MITOCHONDRIA; MODELS, GENETIC; PHYLOGENY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

COLEOPTERA; CURCULIONIDAE; DENDROCTONUS MEXICANUS; SCOLYTINAE;

EID: 56549113241     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2008.09.005     Document Type: Article

References (77)

1. Anderson W.W., Berisford C.W., and Kimmich R.H. Genetic differences among five populations of the southern pine beetle. Ann. Entomol. Soc. Am. 72 (1979) 323-327
2. Avise J.C. Phylogeography. The History and Formation of Species (2000), Harvard University Press, Cambridge
3. Brito P. The influence of Pleistocene glacial refugia on tawny owl genetic diversity and phylogeography in western Europe. Mol. Ecol. 14 (2005) 3077-3094
4. Brouillet, L., Whetstone, R.D., 1993. Climate and physiography. In: Editorial Committee (Eds.), Flora of North America, Flora of North America, vol. 1. Introduction. Oxford University Press, New York, pp. 15-46.
5. Brower A.V.Z. Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution. Proc. Natl. Acad. Sci. USA 91 (1994) 6491-6495
6. Brown B.R. A summary of late-Quaternary pollen records from Mexico west of the Isthmus of the Tehuantepec. In: Bryant Jr. V.M., and Holloway R.G. (Eds). Pollen records of late-Quaternary North American sediments (1985), American Association of Stratigraph Palynologist Foundation, Dallas, Texas 71-94
7. Carter C.A., Robertson J.L., Haack R.A., Lawrence R.K., and Hayes J.L. Genetic relatedness of North American populations of Tomicus piniperda (Coleoptera: Scolytinae). J. Econ. Entomol. 89 (1996) 1345-1353
8. Cibrián-Tovar D., Méndez-Montiel J.T., Campos-Bolaños R., Yates III H.O., and Flores-Lara J. Insectos forestales de México/Forest Insects of Mexico (1995), Universidad Autónoma Chapingo y Comisión Forestal de América del Norte, FAO
9. Clement M., Posada D., and Crandall K.A. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9 (2000) 1657-1659
10. Cognato A.I., Harlin A.D., and Fisher M.L. Genetic structure among pinyon pine beetle populations (Scolytinae: Ips confusus). Environ. Entomol. 32 (2003) 1262-1270
11. Corona A.M., Toledo V.H., and Morrone J.J. Does the Trans-Mexican Volcanic Belt represent a natural biogeographical unit? An analysis of the distributional patterns of the Coleoptera. J. Biogeogr. 34 (2007) 1008-1015
12. Crandall K.A., and Templeton A.R. Empirical test of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction. Genetics 134 (1993) 959-969
13. Cruzan M., and Templeton A.R. Paleoecology and coalescence. Phylogeographic analysis of hypotheses from the fossil record. Trends Ecol. Evol. 15 (2000) 491-496
14. DeCserna Z., Mosiño P.A., and Benassini O. El escenario geográfico: Introducción ecológica (1974), Instituto Nacional de Antropología e Historia, México, DF
15. Drummond A.J., and Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7 (2007) 214
16. Excoffier L., Smouse P.E., and Quattro M. Analysis of molecular variance inferred from metric distances among DNA haplotypes: applications to human mitochondrial DNA restriction data. Genetics 131 (1992) 479-491
17. Excoffier L., Laval G., and Schneider S. Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol. Bioinform. Online 1 (2005) 47-50
18. Faccoli M., Piscedda A., Salvato P., Simonato M., Masutti L., and Battisti A. Genetic structure and phylogeography of pine shoot beetle populations (Tomicus destruens and T. piniperda, Coleoptera Scolytidae) in Italy. Ann. Forest Sci 62 (2005) 361-368
19. Farjon A., and Styles B.T. Pinus (Pinaceae): Flora Neotropica. Monograph 75 (1997), Organization for Flora Neotropica/The New York Botanical Garden, New York
20. Ferrusquía-Villafranca I. Geología de México: Una synopsis. In: Ramamoorty T.P., Bye R., Lot A., and Fa J. (Eds). Diversidad Biológica de México: Origenes y Distribución (1998), Instituto de Biología, UNAM, México 3-108
21. Graham A. Factores históricos y biológicos de la diversidad en México.Geología de México. In: Ramamoorty T.P., Bye R., Lot A., and Fa J. (Eds). Diversidad Biológica de México: Origenes y Distribución (1993), Instituto de Biología, UNAM, México 109-127
22. Graham A. Late Cretaceous and Cenozoic history of North American Vegetation: North of Mexico (1999), Oxford University Press, New York
23. Grant W.S., and Bowen B.W. Shallow population histories in deep evolutionary lineages of marine fishes: Insight from sardines and anchovies and lesson for conservation. J. Hered. 89 (1998) 415-426
24. Gómez-Pompa A. Ecology of the vegetation of Veracruz. In: Graham A. (Ed). Vegetation and Vegetational History of Northern Latin America (1973), Elsevier, Amsterdam 73-148
25. Hasegawa M., Kishino H., and Yano T. Dating of the human-ape by splitting a molecular clock of mitochondrial DNA. J. Mol. Evol. 22 (1985) 160-174
26. Hewitt, G.M., 2004. The structure of biodiversity-insights from molecular phylogeography. Front Zool 1, 4. doi:10.1186/1742-9994-1-4. Available from: .
27. Horn A., Roux-Morabito G., Lieutier F., and Kerdelhue C. Phylogeographic structure and past history of the circum-Mediterranean species Tomicus destruens Woll (Coleoptera: Scolytinae). Mol. Ecol. 15 (2006) 1603-1615
28. Juan C., Oromi P., and Hewitt G.M. Mitochondrial DNA phylogeny and sequential colonization of Canary Island by darkling beetles of the genus Pimelia (Tenebrionidae). Proc. R. Soc. Lond. B 261 (1995) 173-180
29. Kelley S.T., and Farrell B.D. Is specialization a dead end? The phylogeny of host use in Dendroctonus bark beetles (Scolytidae). Evolution 52 (1998) 1731-1743
30. Kelley S.T., Mitton J.F., and Paine T.D. Strong differentiation in mitochondrial DNA of Dendroctonus brevicomis (Coleoptera:Scolytidae) on different subspecies of ponderosa pine. Ann. Entomol. Soc. Am. 92 (1999) 193-197
31. Kelley S.T., Farrell B.D., and Mitton J.B. Effects of specialization on genetic differentiation in sister species of bark beetles. Heredity 84 (2000) 218-227
32. Kohlmayr B., Riegler M., Wegensteiner R., and Stauffer C. Morphological and genetic identification of the three pine pests of the genus Tomicus (Coleoptera:Scolytidae) in Europe. Agric. Forest Entomol. 4 (2002) 151-157
33. Lachniet M.S., and Vázquez-Selem L. Last Glacial Maximum equilibrium line altitudes in the circum-Caribbean (Mexico, Guatemala, Costa Rica, Colombia, and Venezuela). Quatern. Int. 138-139 (2005) 129-144
34. Lanier G.N. Cytotaxonomy of Dendroctonus. In: Sotck M.W. (Ed). Application of Genetics and Cytology in Insects Systematics and Evolution (1981), Forest Wildlife and Range Experiment Station, University of Idaho, Moscow 33-66
35. Langor D.W., and Spencer J.R. Host effects on allozyme and morphological variation of the mountain pine beetle, Dendroctonus ponderosae Hopkins (Coleoptera: Scolytidae). Can. Entomol. 123 (1991) 395-410
36. Lobo J.M., and Halffter G. Biogeographical and ecological factors affecting the altitudinal variation of mountainous communities of coprophagous beetles (Coleoptera: Scarabaeoidea: a comparative study. Ann. Entomol. Soc. Am. 93 (2000) 115-126
37. Lowe A., Harris S., and Ashton P. Ecological Genetics: Design, Analysis, and Application (2004), Blackwell Publishing, Oxford, UK
38. Maroja L.S., Bogdanowicz S.M., Wallin K.F., Raffa K.F., and Harrison R.G. Phylogeography of spruce beetles (Dendroctonus rufipennis Kirby) (Curculionidae: Scolytinae) in North America. Mol. Ecol. 16 (2007) 2560-2573
39. Maldonado-Koerdell M. Geohistory y paleogeography of Middle America. In: West R.C. (Ed). Handbook of Middle America Indians vol. 1. Natural Environment and early cultures (1964), University of Texas, Press, Austin 3-32
40. Márquez J., and Morrone J.J. Relaciones biogeográficas basadas en la distribución de Coleoptera (Insecta). In: Luna I., Morrone J.J., and Espinosa-Organista D. (Eds). Biodiversidad de la Sierra Madre Oriental (2004), Las Prensas de Ciencias Faultad de Ciencias, UNAM, México, DF 375-392
41. Martin P., and Harrell BE. The Pleistocene history of temperate biotas in Mexico and eastern United Status. Ecology 38 (1957) 468-480
42. McDonald J.A. Fitogeografía e historia de la flora alpina-subalpina del noreste de México. In: Ramamoorty T.P., Bye R., Lot A., and Fa J. (Eds). Diversidad Biológica de México: Origenes y Distribución (1998), Instituto de Biología, UNAM, México 665-686
43. Millar C.I. Early evolution of pines. In: Richardson D.M. (Ed). Ecology and biogeography of Pinus (1998), Cambridge University Press, UK 69-91
44. Miller C.N. Mesozoic conifers. Bot. Rev. 43 (1977) 217-280
45. Miller R.R., and Smith M.L. Origin and geography of fishes of central Mexico. In: Hocutt C.W., and Wiley E.O. (Eds). The zoogeography of North American freshwater fishes (1986), John Wiley & Sons, New York 487-517
46. Mock K.E., Bentz B.J., O'Neill M., Chong P., Orwin J., and Pfrender M.E. Landscape-scale genetic variation in a forest outbreak species, the mountain pine beetle (Dendroctonus ponderosae). Mol. Ecol. 16 (2007) 553-568
47. Morrone J.J. Hacia una síntesis biogeográfica de México. Revista Mexicana de Biodiversidad 76 (2005) 207-252
48. Namkoong G., Roberds J.H., Nunnally L.B., and Thomas H.A. Isozyme variations in populations of southern pine beetles. Forest Sci. 25 (1979) 197-203
49. Narave F.H. La vegetación del Cofre de Perote, Veracruz, México. Biotica 10 (1985) 35-151
50. Nielsen R., and Wakeley J.W. Distinguishing migration from isolation: an MCMC approach. Genetics 158 (2001) 885-896
51. Petit R.J., Duminil J., Fineschi S., Hampe A., Salvini D., and Vendramin G.G. Comparative organization of chloroplast, mitochondrial and nuclear diversity in plant populations. Mol. Ecol. 14 (2005) 689-701
52. Posada D., and Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 9 (1998) 817-818
53. Posada D., Crandall K.A., and Templeton A.R. GeoDis: a program for the cladistic analysis of the geographical distribution of genetic haplotypes. Mol. Ecol. 9 (2000) 487-488
54. Ramos-Onsins S.E., and Rozas J. Statistical properties of new neutrality tests against population growth. Mol. Biol. Evol. 19 (2002) 2092-2100
55. Ritzerow S., Konrad H.R., and Stauffer C. Phylogeography of the Eurasian pine shoot beetle Tomicus piniperda (Coleoptera:Scolytidae). Eur. J. Entomol. 101 (2004) 13-19
56. Roberds J.H., Hain F.P., and Nunnally L.B. Genetic structure of southern pine beetle populations. Forest Sci. 37 (1987) 52-59
57. Roderick G.K. Geographic structure of insect populations: Gene flow, phylogeography, and their uses. Annu. Rev. Entomol. 41 (1996) 325-362
58. Rogers A.R., and Harpending H. Population growth makes waves in the distribution of pairwise genetic differences. Mol. Biol. Evol. 19 (1992) 552-569
59. Rozas J., Sánchez-DelBarrio J.C., Messeguer X., and Rozas R. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19 (2003) 2496-2497
60. Salinas-Moreno Y., Mendoza M.G., Barrios M.A., Cisneros R., Macias-Samano J., and Zúñiga G. Areography of the genus Dendroctonus (Coleoptera: Curculionidae: Scolytinae) in Mexico. J. Biogeogr. 31 (2004) 1163-1177
61. Schmitt, T., 2007. Molecular biogeography of Europe: Pleistocene cycles and postglacial trends. Front. Zool. 4, 11. doi:10.1186/1742-9994-4-11. Available from: .
62. Schrey N.M., Schrey A.W., Heist E.J., and Reeve J.D. Fine-scale population structure of southern pine beetle (Coleoptera: Curculionidae) in Mississippi Forest. Environ. Entomol. 37 (2008) 271-276
63. Six D.L., Paine T.D., and Hare D. Allozyme diversity and gene flow in the bark beetle, Dendroctonus jeffreyi (Coleoptera: Scolytidae). Can. J. Forest Res. 29 (1999) 315-323
64. Stauffer C., Lakatos F., and Hewitt G.M. Phylogeography and postglacial colonization routes of Ips typographus L. (Coleoptera, Scolytidae). Mol. Ecol. 8 (1999) 763-773
65. Stock M.W., and Amman G.D. Genetic differentiation among mountain pine beetle population from lodgepole pine and ponderosa pine in northeast Utah. Ann. Entomol. Soc. Am. 73 (1980) 472-478
66. Stock M.W., Amman G.D., and Higby P.K. Genetic variation among mountain pine beetles (Dendroctonus ponderosae) (Coleoptera:Scolytida). Populations from seven western states. Ann. Entomol. Soc. Am. 77 (1984) 760-764
67. Stock, M.W., Amman, G.D., 1985. Host effects on the genetic structure of mountain beetle, Dendroctonus ponderosae, populations. In: Safranyik, L. (Ed.), The role of the host in the population dynamics of forest insects: Proceedings, IUFRO Working Parties S2.07-05 and S2.07-06 Symposium; l983 September 4-7. Canadian Forest Service, Pacific Forest Res. Center, Alberta, Canada, pp. 83-95.
68. Sturgeon K.B., and Mitton J.B. Allozyme and morphological differentiation of mountain pine beetle Dendroctonus ponderosae Hopkins (Coleoptera: Scolytidae) associated with host tree. Evolution 40 (1986) 232-290
69. Swofford D.L. PAUP*. Phylogenetic Analysis Using Parsimony, (*and Other Methods), 4.0b4a (1998), Smithsonian Institute, Washington, DC
70. Tajima F. Statistical testing for the neutral mutation hypothesis by DNA polymorphism. Genetics 123 (1989) 585-595
71. Templeton A.R. Statistical phylogeography: methods of evaluating and minimizing inference errors. Mol. Ecol. 13 (2004) 789-809
72. Templeton A.R., Crandall K.A., and Sing C.F. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 132 (1992) 619-633
73. Templeton A.R., Routman E., and Phillips C.A. Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum. Genetics 140 (1995) 767-782
74. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24 (1997) 4876-4882
75. Wood S.L. The bark and ambrosia beetles of North and Central America (Coleoptera:Scolytidae). A taxonomic monograph. Great Basin Nat. 6 (1982) 1-1357
76. Zúñiga G., Cisneros R., Hayes J.L., and Macias-Samano J.E. Karyology, geography distribution and origin of the genus Dendroctonus Erichson (Coleoptera: Scolytidae). Ann. Entomol. Soc. Am. 95 (2002) 267-275
77. Zúñiga G., Cisneros R., Salinas-Moreno Y., Hayes J.L., and Rinehart J.E. Genetic structure of Dendroctonus mexicanus Hopkins (Coleoptera: Curculionidae: Scolytinae) in the Trans-Mexican Volcanic Belt. Ann. Entomol. Soc. Am. 9 (2006) 945-958