-
1
-
-
84886709888
-
Antimicrobial Peptides
-
In; John Wiley & Sons, Inc. New York - 225
-
Marcos, J. F.; Manzanares, P. Antimicrobial Peptides. In Antimicrobial Polymers; John Wiley & Sons, Inc.: New York, 2011; pp 195-225.
-
(2011)
Antimicrobial Polymers
, pp. 195
-
-
Marcos, J.F.1
Manzanares, P.2
-
2
-
-
14944375311
-
New targets and screening approaches in antimicrobial drug discovery
-
Brown, E. D.; Wright, G. D. New targets and screening approaches in antimicrobial drug discovery Chem. Rev. 2005, 105, 759-774
-
(2005)
Chem. Rev.
, vol.105
, pp. 759-774
-
-
Brown, E.D.1
Wright, G.D.2
-
3
-
-
77958085274
-
Describing the mechanism of antimicrobial peptide action with the interfacial activity model
-
Wimley, W. C. Describing the mechanism of antimicrobial peptide action with the interfacial activity model ACS Chem. Biol. 2010, 5, 905-917
-
(2010)
ACS Chem. Biol.
, vol.5
, pp. 905-917
-
-
Wimley, W.C.1
-
4
-
-
0026760182
-
The crisis in antibiotic-resistance
-
Neu, H. C. The crisis in antibiotic-resistance Science 1992, 257, 1064-1073
-
(1992)
Science
, vol.257
, pp. 1064-1073
-
-
Neu, H.C.1
-
5
-
-
7644228080
-
The importance of bactericidal drugs: Future directions in infectious disease
-
Finberg, R. W.; Moellering, R. C.; Tally, F. P.; Craig, W. A.; Pankey, G. A.; Dellinger, E. P.; West, M. A.; Joshi, M.; Linden, P. K.; Rolston, K. V.; Rotschafer, J. C.; Rybak, M. J. The importance of bactericidal drugs: Future directions in infectious disease Clin. Infect. Dis. 2004, 39, 1314-1320
-
(2004)
Clin. Infect. Dis.
, vol.39
, pp. 1314-1320
-
-
Finberg, R.W.1
Moellering, R.C.2
Tally, F.P.3
Craig, W.A.4
Pankey, G.A.5
Dellinger, E.P.6
West, M.A.7
Joshi, M.8
Linden, P.K.9
Rolston, K.V.10
Rotschafer, J.C.11
Rybak, M.J.12
-
6
-
-
56249128811
-
Ceragenins: Cholic acid-based mimics of antimicrobial peptides
-
Lai, X.-Z.; Feng, Y.; Pollard, J.; Chin, J. N.; Rybak, M. J.; Bucki, R.; Epand, R. F.; Epand, R. M.; Savage, P. B. Ceragenins: cholic acid-based mimics of antimicrobial peptides Acc. Chem. Res. 2008, 41, 1233-1240
-
(2008)
Acc. Chem. Res.
, vol.41
, pp. 1233-1240
-
-
Lai, X.-Z.1
Feng, Y.2
Pollard, J.3
Chin, J.N.4
Rybak, M.J.5
Bucki, R.6
Epand, R.F.7
Epand, R.M.8
Savage, P.B.9
-
7
-
-
33645505791
-
Solid-state NMR studies of the structure, dynamics, and assembly of β-sheet membrane peptides and α-helical membrane proteins with antibiotic activities
-
Hong, M. Solid-state NMR studies of the structure, dynamics, and assembly of β-sheet membrane peptides and α-helical membrane proteins with antibiotic activities Acc. Chem. Res. 2006, 39, 176-183
-
(2006)
Acc. Chem. Res.
, vol.39
, pp. 176-183
-
-
Hong, M.1
-
8
-
-
84857411069
-
Designing antimicrobial peptides: Form follows function
-
Fjell, C. D.; Hiss, J. A.; Hancock, R. E. W.; Schneider, G. Designing antimicrobial peptides: form follows function Nat. Rev. Drug Discovery 2012, 11, 37-51
-
(2012)
Nat. Rev. Drug Discovery
, vol.11
, pp. 37-51
-
-
Fjell, C.D.1
Hiss, J.A.2
Hancock, R.E.W.3
Schneider, G.4
-
9
-
-
33845699790
-
Antimicrobial and host-defense peptides as new anti-infective therapeutic strategies
-
Hancock, R. E. W.; Sahl, H. G. Antimicrobial and host-defense peptides as new anti-infective therapeutic strategies Nat. Biotechnol. 2006, 24, 1551-1557
-
(2006)
Nat. Biotechnol.
, vol.24
, pp. 1551-1557
-
-
Hancock, R.E.W.1
Sahl, H.G.2
-
10
-
-
0032007854
-
Cationic peptides: A new source of antibiotics
-
Hancock, R. E. W.; Lehrer, R. Cationic peptides: a new source of antibiotics Trends Biotechnol. 1998, 16, 82-88
-
(1998)
Trends Biotechnol.
, vol.16
, pp. 82-88
-
-
Hancock, R.E.W.1
Lehrer, R.2
-
11
-
-
37349104237
-
Alternative mechanisms of action of cationic antimicrobial peptides on bacteria
-
Hale, J. D. F.; Hancock, R. E. W. Alternative mechanisms of action of cationic antimicrobial peptides on bacteria Expert Rev. Anti Infect. Ther. 2007, 5, 951-959
-
(2007)
Expert Rev. Anti Infect. Ther.
, vol.5
, pp. 951-959
-
-
Hale, J.D.F.1
Hancock, R.E.W.2
-
12
-
-
77949346087
-
Structure-Activity Relationships of Polymyxin Antibiotics
-
Velkov, T.; Thompson, P. E.; Nation, R. L.; Li, J. Structure-Activity Relationships of Polymyxin Antibiotics J. Med. Chem. 2009, 53, 1898-1916
-
(2009)
J. Med. Chem.
, vol.53
, pp. 1898-1916
-
-
Velkov, T.1
Thompson, P.E.2
Nation, R.L.3
Li, J.4
-
13
-
-
75449102744
-
De Novo design of antimicrobial polymers, foldamers, and small Molecules: From discovery to practical applications
-
Tew, G. N.; Scott, R. W.; Klein, M. L.; DeGrado, W. F. De Novo design of antimicrobial polymers, foldamers, and small Molecules: from discovery to practical applications Acc. Chem. Res. 2009, 43, 30-39
-
(2009)
Acc. Chem. Res.
, vol.43
, pp. 30-39
-
-
Tew, G.N.1
Scott, R.W.2
Klein, M.L.3
Degrado, W.F.4
-
14
-
-
33749006591
-
The human beta-defensin-3, an antibacterial peptide with multiple biological functions
-
Dhople, V.; Krukemeyer, A.; Ramamoorthy, A. The human beta-defensin-3, an antibacterial peptide with multiple biological functions Biochim. Biophys. Acta, Biomembr. 2006, 1758, 1499-1512
-
(2006)
Biochim. Biophys. Acta, Biomembr.
, vol.1758
, pp. 1499-1512
-
-
Dhople, V.1
Krukemeyer, A.2
Ramamoorthy, A.3
-
15
-
-
0038778549
-
Evidence for membrane thinning effect as the mechanism for peptide-induced pore formation
-
Chen, F.-Y.; Lee, M.-T.; Huang, H. W. Evidence for membrane thinning effect as the mechanism for peptide-induced pore formation Biophys. J. 2003, 84, 3751-3758
-
(2003)
Biophys. J.
, vol.84
, pp. 3751-3758
-
-
Chen, F.-Y.1
Lee, M.-T.2
Huang, H.W.3
-
16
-
-
14544282377
-
Antimicrobial peptides: Pore formers or metabolic inhibitors in bacteria?
-
Brogden, K. A. Antimicrobial peptides: pore formers or metabolic inhibitors in bacteria? Nat. Rev. Microbiol. 2005, 3, 238-250
-
(2005)
Nat. Rev. Microbiol.
, vol.3
, pp. 238-250
-
-
Brogden, K.A.1
-
17
-
-
33745747109
-
Solid-State NMR Investigation of the Membrane-Disrupting Mechanism of Antimicrobial Peptides MSI-78 and MSI-594 Derived from Magainin 2 and Melittin
-
Ramamoorthy, A.; Thennarasu, S.; Lee, D.-K.; Tan, A.; Maloy, L. Solid-State NMR Investigation of the Membrane-Disrupting Mechanism of Antimicrobial Peptides MSI-78 and MSI-594 Derived from Magainin 2 and Melittin Biophys. J. 2006, 91, 206-216
-
(2006)
Biophys. J.
, vol.91
, pp. 206-216
-
-
Ramamoorthy, A.1
Thennarasu, S.2
Lee, D.-K.3
Tan, A.4
Maloy, L.5
-
18
-
-
70350450689
-
Multifunctional host defense peptides: Functional and mechanistic insights from NMR structures of potent antimicrobial peptides
-
Bhattacharjya, S.; Ramamoorthy, A. Multifunctional host defense peptides: functional and mechanistic insights from NMR structures of potent antimicrobial peptides FEBS J. 2009, 276, 6465-6473
-
(2009)
FEBS J.
, vol.276
, pp. 6465-6473
-
-
Bhattacharjya, S.1
Ramamoorthy, A.2
-
19
-
-
74249106455
-
Cholesterol reduces pardaxin's dynamics - A barrel-stave mechanism of membrane disruption investigated by solid-state NMR
-
Ramamoorthy, A.; Lee, D.-K.; Narasimhaswamy, T.; Nanga, R. P. R. Cholesterol reduces pardaxin's dynamics-a barrel-stave mechanism of membrane disruption investigated by solid-state NMR Biochim. Biophys. Acta, Biomembr. 2010, 1798, 223-227
-
(2010)
Biochim. Biophys. Acta, Biomembr.
, vol.1798
, pp. 223-227
-
-
Ramamoorthy, A.1
Lee, D.-K.2
Narasimhaswamy, T.3
Nanga, R.P.R.4
-
20
-
-
79953186604
-
Structure and dynamics of cationic membrane peptides and proteins: Insights from solid-state NMR
-
Hong, M.; Su, Y. Structure and dynamics of cationic membrane peptides and proteins: Insights from solid-state NMR Protein Sci. 2011, 20, 641-655
-
(2011)
Protein Sci.
, vol.20
, pp. 641-655
-
-
Hong, M.1
Su, Y.2
-
21
-
-
45549085024
-
Effects of guanidinium-phosphate hydrogen bonding on the membrane-bound structure and activity of an arginine-rich membrane peptide from solid-state NMR spectroscopy
-
Tang, M.; Waring, A. J.; Lehrer, R. L.; Hong, M. Effects of guanidinium-phosphate hydrogen bonding on the membrane-bound structure and activity of an arginine-rich membrane peptide from solid-state NMR spectroscopy Angew. Chem., Int. Ed. 2008, 47, 3202-3205
-
(2008)
Angew. Chem., Int. Ed.
, vol.47
, pp. 3202-3205
-
-
Tang, M.1
Waring, A.J.2
Lehrer, R.L.3
Hong, M.4
-
22
-
-
33748940617
-
SFG studies on interactions between antimicrobial peptides and supported lipid bilayers
-
Chen, X.; Chen, Z. SFG studies on interactions between antimicrobial peptides and supported lipid bilayers Biochim. Biophys. Acta, Biomembr. 2006, 1758, 1257-1273
-
(2006)
Biochim. Biophys. Acta, Biomembr.
, vol.1758
, pp. 1257-1273
-
-
Chen, X.1
Chen, Z.2
-
23
-
-
70449885926
-
Dependence of Antimicrobial Selectivity and Potency on Oligomer Structure Investigated Using Substrate Supported Lipid Bilayers and Sum Frequency Generation Vibrational Spectroscopy
-
Avery, C. W.; Som, A.; Xu, Y.; Tew, G. N.; Chen, Z. Dependence of Antimicrobial Selectivity and Potency on Oligomer Structure Investigated Using Substrate Supported Lipid Bilayers and Sum Frequency Generation Vibrational Spectroscopy Anal. Chem. 2009, 81, 8365-8372
-
(2009)
Anal. Chem.
, vol.81
, pp. 8365-8372
-
-
Avery, C.W.1
Som, A.2
Xu, Y.3
Tew, G.N.4
Chen, Z.5
-
24
-
-
0033592458
-
CD spectra of indolicidin antimicrobial peptides suggest turns, not polyproline helix
-
Ladokhin, A. S.; Selsted, M. E.; White, S. H. CD spectra of indolicidin antimicrobial peptides suggest turns, not polyproline helix Biochemistry (Moscow) 1999, 38, 12313-12319
-
(1999)
Biochemistry (Moscow)
, vol.38
, pp. 12313-12319
-
-
Ladokhin, A.S.1
Selsted, M.E.2
White, S.H.3
-
25
-
-
0031686776
-
Activities of LL-37, a cathelin-associated antimicrobial peptide of human neutrophils
-
Turner, J.; Cho, Y.; Dinh, N. N.; Waring, A. J.; Lehrer, R. I. Activities of LL-37, a cathelin-associated antimicrobial peptide of human neutrophils Antimicrob. Agents Chemother. 1998, 42, 2206-2214
-
(1998)
Antimicrob. Agents Chemother.
, vol.42
, pp. 2206-2214
-
-
Turner, J.1
Cho, Y.2
Dinh, N.N.3
Waring, A.J.4
Lehrer, R.I.5
-
26
-
-
0032488904
-
Conformation-dependent antibacterial activity of the naturally occurring human peptide LL-37
-
Johansson, J.; Gudmundsson, G. H.; Rottenberg, M. E.; Berndt, K. D.; Agerberth, B. Conformation-dependent antibacterial activity of the naturally occurring human peptide LL-37 J. Biol. Chem. 1998, 273, 3718-3724
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 3718-3724
-
-
Johansson, J.1
Gudmundsson, G.H.2
Rottenberg, M.E.3
Berndt, K.D.4
Agerberth, B.5
-
27
-
-
0031022395
-
Bilayer interactions of indolicidin, a small antimicrobial peptide rich in tryptophan, proline, and basic amino acids
-
Ladokhin, A. S.; Selsted, M. E.; White, S. H. Bilayer interactions of indolicidin, a small antimicrobial peptide rich in tryptophan, proline, and basic amino acids Biophys. J. 1997, 72, 794-805
-
(1997)
Biophys. J.
, vol.72
, pp. 794-805
-
-
Ladokhin, A.S.1
Selsted, M.E.2
White, S.H.3
-
28
-
-
0029738872
-
Experimentally determined hydrophobicity scale for proteins at membrane interfaces
-
Wimley, W. C.; White, S. H. Experimentally determined hydrophobicity scale for proteins at membrane interfaces Nat. Struct. Biol. 1996, 3, 842-848
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 842-848
-
-
Wimley, W.C.1
White, S.H.2
-
29
-
-
0032987478
-
Membrane protein folding and stability: Physical principles
-
White, S. H.; Wimley, W. C. Membrane protein folding and stability: Physical principles Annu. Rev. Biophys. Biomol. Struct. 1999, 28, 319-365
-
(1999)
Annu. Rev. Biophys. Biomol. Struct.
, vol.28
, pp. 319-365
-
-
White, S.H.1
Wimley, W.C.2
-
30
-
-
0033613815
-
Folding of amphipathic alpha-helices on membranes: Energetics of helix formation by melittin
-
Ladokhin, A. S.; White, S. H. Folding of amphipathic alpha-helices on membranes: Energetics of helix formation by melittin J. Mol. Biol. 1999, 285, 1363-1369
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 1363-1369
-
-
Ladokhin, A.S.1
White, S.H.2
-
31
-
-
84856725828
-
Thermodynamic measurements of bilayer insertion of a single transmembrane helix chaperoned by fluorinated surfactants
-
Kyrychenko, A.; Rodnin, M. V.; Posokhov, Y. O.; Holt, A.; Pucci, B.; Killian, J. A.; Ladokhin, A. S. Thermodynamic measurements of bilayer insertion of a single transmembrane helix chaperoned by fluorinated surfactants J. Mol. Biol. 2012, 416, 328-334
-
(2012)
J. Mol. Biol.
, vol.416
, pp. 328-334
-
-
Kyrychenko, A.1
Rodnin, M.V.2
Posokhov, Y.O.3
Holt, A.4
Pucci, B.5
Killian, J.A.6
Ladokhin, A.S.7
-
32
-
-
58149181485
-
Lipids on the move: Simulations of membrane pores, domains, stalks and curves
-
Marrink, S. J.; de Vries, A. H.; Tieleman, D. P. Lipids on the move: Simulations of membrane pores, domains, stalks and curves Biochim. Biophys. Acta, Biomembr. 2009, 1788, 149-168
-
(2009)
Biochim. Biophys. Acta, Biomembr.
, vol.1788
, pp. 149-168
-
-
Marrink, S.J.1
De Vries, A.H.2
Tieleman, D.P.3
-
33
-
-
0032738066
-
Simulation studies of the interaction of antimicrobial peptides and lipid bilayers
-
La Rocca, P.; Biggin, P. C.; Tieleman, D. P.; Sansom, M. S. P. Simulation studies of the interaction of antimicrobial peptides and lipid bilayers Biochim. Biophys. Acta, Biomembr. 1999, 1462, 185-200
-
(1999)
Biochim. Biophys. Acta, Biomembr.
, vol.1462
, pp. 185-200
-
-
La Rocca, P.1
Biggin, P.C.2
Tieleman, D.P.3
Sansom, M.S.P.4
-
34
-
-
36248932202
-
Computer simulation of antimicrobial peptides
-
Matyus, E.; Kandt, C.; Tieleman, D. P. Computer simulation of antimicrobial peptides Curr. Med. Chem. 2007, 14, 2789-2798
-
(2007)
Curr. Med. Chem.
, vol.14
, pp. 2789-2798
-
-
Matyus, E.1
Kandt, C.2
Tieleman, D.P.3
-
35
-
-
58149144259
-
Coarse-Grained Simulation Studies of Peptide-Induced Pore Formation
-
Illya, G.; Deserno, M. Coarse-Grained Simulation Studies of Peptide-Induced Pore Formation Biophys. J. 2008, 95, 4163-4173
-
(2008)
Biophys. J.
, vol.95
, pp. 4163-4173
-
-
Illya, G.1
Deserno, M.2
-
36
-
-
84865318587
-
Binding and reorientation of melittin in a POPC bilayer: Computer simulations
-
Irudayam, S. J.; Berkowitz, M. L. Binding and reorientation of melittin in a POPC bilayer: Computer simulations Biochim. Biophys. Acta, Biomembr. 2012, 1818, 2975-2981
-
(2012)
Biochim. Biophys. Acta, Biomembr.
, vol.1818
, pp. 2975-2981
-
-
Irudayam, S.J.1
Berkowitz, M.L.2
-
37
-
-
34547653932
-
Real-time structural investigation of a lipid bilayer during its interaction with melittin using sum frequency generation vibrational spectroscopy
-
Chen, X.; Wang, J.; Kristalyn, C. B.; Chen, Z. Real-time structural investigation of a lipid bilayer during its interaction with melittin using sum frequency generation vibrational spectroscopy Biophys. J. 2007, 93, 866-875
-
(2007)
Biophys. J.
, vol.93
, pp. 866-875
-
-
Chen, X.1
Wang, J.2
Kristalyn, C.B.3
Chen, Z.4
-
38
-
-
34347229452
-
De novo design of selective antibiotic peptides by incorporation of unnatural amino acids
-
Hicks, R. P.; Bhonsle, J. B.; Venugopal, D.; Koser, B. W.; Magill, A. J. De novo design of selective antibiotic peptides by incorporation of unnatural amino acids J. Med. Chem. 2007, 50, 3026-3036
-
(2007)
J. Med. Chem.
, vol.50
, pp. 3026-3036
-
-
Hicks, R.P.1
Bhonsle, J.B.2
Venugopal, D.3
Koser, B.W.4
Magill, A.J.5
-
39
-
-
0031059377
-
Hydrophobicity, hydrophobic moment and angle subtended by charged residues modulate antibacterial and haemolytic activity of amphipathic helical peptides
-
Dathe, M.; Wieprecht, T.; Nikolenko, H.; Handel, L.; Maloy, W. L.; MacDonald, D. L.; Beyermann, M.; Bienert, M. Hydrophobicity, hydrophobic moment and angle subtended by charged residues modulate antibacterial and haemolytic activity of amphipathic helical peptides FEBS Lett. 1997, 403, 208-212
-
(1997)
FEBS Lett.
, vol.403
, pp. 208-212
-
-
Dathe, M.1
Wieprecht, T.2
Nikolenko, H.3
Handel, L.4
Maloy, W.L.5
Macdonald, D.L.6
Beyermann, M.7
Bienert, M.8
-
40
-
-
0027043261
-
Design of model amphipathic peptides having potent antimicrobial activities
-
Blondelle, S. E.; Houghten, R. A. Design of model amphipathic peptides having potent antimicrobial activities Biochemistry (Moscow) 1992, 31, 12688-12694
-
(1992)
Biochemistry (Moscow)
, vol.31
, pp. 12688-12694
-
-
Blondelle, S.E.1
Houghten, R.A.2
-
41
-
-
0031005930
-
A repertoire of novel antibacterial diastereomeric peptides with selective cytolytic activity
-
Oren, Z.; Hong, J.; Shai, Y. A repertoire of novel antibacterial diastereomeric peptides with selective cytolytic activity J. Biol. Chem. 1997, 272, 14643-14649
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 14643-14649
-
-
Oren, Z.1
Hong, J.2
Shai, Y.3
-
42
-
-
0029665072
-
Diastereomers of cytolysins, a novel class of potent antibacterial peptides
-
Shai, Y.; Oren, Z. Diastereomers of cytolysins, a novel class of potent antibacterial peptides J. Biol. Chem. 1996, 271, 7305-7308
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 7305-7308
-
-
Shai, Y.1
Oren, Z.2
-
43
-
-
0031024551
-
Selective lysis of bacteria but not mammalian cells by diastereomers of melittin: Structure-function study
-
Oren, Z.; Shai, Y. Selective lysis of bacteria but not mammalian cells by diastereomers of melittin: structure-function study Biochemistry (Moscow) 1997, 36, 1826-1835
-
(1997)
Biochemistry (Moscow)
, vol.36
, pp. 1826-1835
-
-
Oren, Z.1
Shai, Y.2
-
44
-
-
34249858459
-
AMPer: A database and an automated discovery tool for antimicrobial peptides
-
Fjell, C. D.; Hancock, R. E. W.; Cherkasov, A. AMPer: a database and an automated discovery tool for antimicrobial peptides Bioinformatics 2007, 23, 1148-1155
-
(2007)
Bioinformatics
, vol.23
, pp. 1148-1155
-
-
Fjell, C.D.1
Hancock, R.E.W.2
Cherkasov, A.3
-
45
-
-
0347755460
-
APD: The Antimicrobial Peptide Database
-
Wang, Z.; Wang, G. S. APD: the Antimicrobial Peptide Database Nucleic Acids Res. 2004, 32, D590-D592
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Wang, Z.1
Wang, G.S.2
-
46
-
-
75549090102
-
CAMP: A useful resource for research on antimicrobial peptides
-
Thomas, S.; Karnik, S.; Barai, R. S.; Jayaraman, V. K.; Idicula-Thomas, S. CAMP: a useful resource for research on antimicrobial peptides Nucleic Acids Res. 2010, 38, D774-D780
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Thomas, S.1
Karnik, S.2
Barai, R.S.3
Jayaraman, V.K.4
Idicula-Thomas, S.5
-
47
-
-
0023746603
-
Structure and bactericidal activity of an antibiotic dodecapeptide purified from bovine neutrophils
-
Romeo, D.; Skerlavaj, B.; Bolognesi, M.; Gennaro, R. Structure and bactericidal activity of an antibiotic dodecapeptide purified from bovine neutrophils J. Biol. Chem. 1988, 263, 9573-9575
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 9573-9575
-
-
Romeo, D.1
Skerlavaj, B.2
Bolognesi, M.3
Gennaro, R.4
-
48
-
-
0032907969
-
Improved derivatives of bactenecin, a cyclic dodecameric antimicrobial cationic peptide
-
Wu, M. H.; Hancock, R. E. W. Improved derivatives of bactenecin, a cyclic dodecameric antimicrobial cationic peptide Antimicrob. Agents Chemother. 1999, 43, 1274-1276
-
(1999)
Antimicrob. Agents Chemother.
, vol.43
, pp. 1274-1276
-
-
Wu, M.H.1
Hancock, R.E.W.2
-
49
-
-
23444451770
-
High-throughput generation of small antibacterial peptides with improved activity
-
Hilpert, K.; Volkmer-Engert, R.; Walter, T.; Hancock, R. E. W. High-throughput generation of small antibacterial peptides with improved activity Nat. Biotechnol. 2005, 23, 1008-1012
-
(2005)
Nat. Biotechnol.
, vol.23
, pp. 1008-1012
-
-
Hilpert, K.1
Volkmer-Engert, R.2
Walter, T.3
Hancock, R.E.W.4
-
50
-
-
46249092554
-
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
-
Hess, B.; Kutzner, C.; van der Spoel, D.; Lindahl, E. GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation J. Chem. Theory Comput. 2008, 4, 435-447
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
Van Der Spoel, D.3
Lindahl, E.4
-
51
-
-
0030957823
-
Molecular basis for membrane phospholipid diversity: Why are there so many lipids?
-
Dowhan, W. Molecular basis for membrane phospholipid diversity: Why are there so many lipids? Annu. Rev. Biochem. 1997, 66, 199-232
-
(1997)
Annu. Rev. Biochem.
, vol.66
, pp. 199-232
-
-
Dowhan, W.1
-
52
-
-
0035879913
-
Analysis of phospholipid species in human blood using normal-phase liquid chromatography coupled with electrospray ionization ion-trap tandem mass spectrometry
-
Uran, S.; Larsen, A.; Jacobsen, P. B.; Skotland, T. Analysis of phospholipid species in human blood using normal-phase liquid chromatography coupled with electrospray ionization ion-trap tandem mass spectrometry J. Chromatogr. B: Anal. Technol. Biomed. Life Sci. 2001, 758, 265-275
-
(2001)
J. Chromatogr. B: Anal. Technol. Biomed. Life Sci.
, vol.758
, pp. 265-275
-
-
Uran, S.1
Larsen, A.2
Jacobsen, P.B.3
Skotland, T.4
-
53
-
-
84865652060
-
Probing ion channel activity of human islet amyloid polypeptide (amylin)
-
Zhao, J.; Luo, Y.; Jang, H.; Yu, X.; Wei, G.; Nussinov, R.; Zheng, J. Probing ion channel activity of human islet amyloid polypeptide (amylin) Biochim. Biophys. Acta, Biomembr. 2012, 1818, 3121-3130
-
(2012)
Biochim. Biophys. Acta, Biomembr.
, vol.1818
, pp. 3121-3130
-
-
Zhao, J.1
Luo, Y.2
Jang, H.3
Yu, X.4
Wei, G.5
Nussinov, R.6
Zheng, J.7
-
54
-
-
84878034291
-
Molecular interactions of Alzheimer amyloid-beta oligomers with neutral and negatively charged lipid bilayers
-
Yu, X.; Wang, Q.; Pan, Q.; Zhou, F.; Zheng, J. Molecular interactions of Alzheimer amyloid-beta oligomers with neutral and negatively charged lipid bilayers Phys. Chem. Chem. Phys. 2013, 15, 8878-8889
-
(2013)
Phys. Chem. Chem. Phys.
, vol.15
, pp. 8878-8889
-
-
Yu, X.1
Wang, Q.2
Pan, Q.3
Zhou, F.4
Zheng, J.5
-
55
-
-
34548788549
-
Models of {beta}-amyloid ion-channels in the membrane suggest that channel formation in the bilayer is a dynamic process
-
Jang, H.; Zheng, J.; Nussinov, R. Models of {beta}-amyloid ion-channels in the membrane suggest that channel formation in the bilayer is a dynamic process Biophys. J. 2007, 93, 1938-1949
-
(2007)
Biophys. J.
, vol.93
, pp. 1938-1949
-
-
Jang, H.1
Zheng, J.2
Nussinov, R.3
-
56
-
-
84864281394
-
Cholesterol promotes the interaction of Alzheimer β-amyloid monomer with lipid bilayer
-
Yu, X.; Zheng, J. Cholesterol promotes the interaction of Alzheimer β-amyloid monomer with lipid bilayer J. Mol. Biol. 2012, 421, 561-571
-
(2012)
J. Mol. Biol.
, vol.421
, pp. 561-571
-
-
Yu, X.1
Zheng, J.2
-
57
-
-
67649472570
-
Transmembrane protein topology prediction using support vector machines
-
Nugent, T.; Jones, D. Transmembrane protein topology prediction using support vector machines BMC Bioinf. 2009, 10, 159
-
(2009)
BMC Bioinf.
, vol.10
, pp. 159
-
-
Nugent, T.1
Jones, D.2
-
58
-
-
34047151404
-
Improving the accuracy of transmembrane protein topology prediction using evolutionary information
-
Jones, D. T. Improving the accuracy of transmembrane protein topology prediction using evolutionary information Bioinformatics 2007, 23, 538-544
-
(2007)
Bioinformatics
, vol.23
, pp. 538-544
-
-
Jones, D.T.1
-
59
-
-
1642485164
-
Coarse grained model for semiquantitative lipid simulations
-
Marrink, S. J.; de Vries, A. H.; Mark, A. E. Coarse grained model for semiquantitative lipid simulations J. Phys. Chem. B 2004, 108, 750-760
-
(2004)
J. Phys. Chem. B
, vol.108
, pp. 750-760
-
-
Marrink, S.J.1
De Vries, A.H.2
Mark, A.E.3
-
60
-
-
84986519238
-
The weighted histogram analysis method for free-energy calculations on biomolecules. I. The method
-
Kumar, S.; Rosenberg, J. M.; Bouzida, D.; Swendsen, R. H.; Kollman, P. A. The weighted histogram analysis method for free-energy calculations on biomolecules. I. The method J. Comput. Chem. 1992, 13, 1011-1021
-
(1992)
J. Comput. Chem.
, vol.13
, pp. 1011-1021
-
-
Kumar, S.1
Rosenberg, J.M.2
Bouzida, D.3
Swendsen, R.H.4
Kollman, P.A.5
-
61
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen, H. J. C.; Postma, J. P. M.; Vangunsteren, W. F.; Dinola, A.; Haak, J. R. Molecular dynamics with coupling to an external bath J. Chem. Phys. 1984, 81, 3684-3690
-
(1984)
J. Chem. Phys.
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Vangunsteren, W.F.3
Dinola, A.4
Haak, J.R.5
-
62
-
-
78651282170
-
G-wham - A free weighted histogram analysis implementation including robust error and autocorrelation estimates
-
Hub, J. S.; de Groot, B. L.; van der Spoel, D. g-wham-A free weighted histogram analysis implementation including robust error and autocorrelation estimates J. Chem. Theory Comput. 2010, 6, 3713-3720
-
(2010)
J. Chem. Theory Comput.
, vol.6
, pp. 3713-3720
-
-
Hub, J.S.1
De Groot, B.L.2
Van Der Spoel, D.3
-
63
-
-
77950584902
-
Reconstruction of atomistic details from coarse-grained structures
-
Rzepiela, A. J.; Schäfer, L. V.; Goga, N.; Risselada, H. J.; De Vries, A. H.; Marrink, S. J. Reconstruction of atomistic details from coarse-grained structures J. Comput. Chem. 2010, 31, 1333-1343
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 1333-1343
-
-
Rzepiela, A.J.1
Schäfer, L.V.2
Goga, N.3
Risselada, H.J.4
De Vries, A.H.5
Marrink, S.J.6
-
64
-
-
84872142909
-
Improved Parameters for the Martini Coarse-Grained Protein Force Field
-
de Jong, D. H.; Singh, G.; Bennett, W. F. D.; Arnarez, C.; Wassenaar, T. A.; Schäfer, L. V.; Periole, X.; Tieleman, D. P.; Marrink, S. J. Improved Parameters for the Martini Coarse-Grained Protein Force Field J. Chem. Theory Comput. 2012, 9, 687-697
-
(2012)
J. Chem. Theory Comput.
, vol.9
, pp. 687-697
-
-
De Jong, D.H.1
Singh, G.2
Bennett, W.F.D.3
Arnarez, C.4
Wassenaar, T.A.5
Schäfer, L.V.6
Periole, X.7
Tieleman, D.P.8
Marrink, S.J.9
-
65
-
-
49449113010
-
The MARTINI coarse-grained force field: Extension to proteins
-
Monticelli, L.; Kandasamy, S. K.; Periole, X.; Larson, R. G.; Tieleman, D. P.; Marrink, S.-J. The MARTINI coarse-grained force field: extension to proteins J. Chem. Theory Comput. 2008, 4, 819-834
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 819-834
-
-
Monticelli, L.1
Kandasamy, S.K.2
Periole, X.3
Larson, R.G.4
Tieleman, D.P.5
Marrink, S.-J.6
-
66
-
-
73949130043
-
Martini Coarse-Grained Force Field: Extension to Carbohydrates
-
Lopez, C. A.; Rzepiela, A. J.; de Vries, A. H.; Dijkhuizen, L.; Huenenberger, P. H.; Marrink, S. J. Martini Coarse-Grained Force Field: Extension to Carbohydrates J. Chem. Theory Comput. 2009, 5, 3195-3210
-
(2009)
J. Chem. Theory Comput.
, vol.5
, pp. 3195-3210
-
-
Lopez, C.A.1
Rzepiela, A.J.2
De Vries, A.H.3
Dijkhuizen, L.4
Huenenberger, P.H.5
Marrink, S.J.6
-
67
-
-
34547474332
-
The MARTINI force field: Coarse grained model for biomolecular simulations
-
Marrink, S. J.; Risselada, H. J.; Yefimov, S.; Tieleman, D. P.; de Vries, A. H. The MARTINI force field: Coarse grained model for biomolecular simulations J. Phys. Chem. B 2007, 111, 7812-7824
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 7812-7824
-
-
Marrink, S.J.1
Risselada, H.J.2
Yefimov, S.3
Tieleman, D.P.4
De Vries, A.H.5
-
68
-
-
77956973165
-
Structural Studies of a Peptide with Immune Modulating and Direct Antimicrobial Activity
-
Wieczorek, M.; Jenssen, H.; Kindrachuk, J.; Scott, W. R. P.; Elliott, M.; Hilpert, K.; Cheng, J. T. J.; Hancock, R. E. W.; Straus, S. K. Structural Studies of a Peptide with Immune Modulating and Direct Antimicrobial Activity Chem. Biol. 2010, 17, 970-980
-
(2010)
Chem. Biol.
, vol.17
, pp. 970-980
-
-
Wieczorek, M.1
Jenssen, H.2
Kindrachuk, J.3
Scott, W.R.P.4
Elliott, M.5
Hilpert, K.6
Cheng, J.T.J.7
Hancock, R.E.W.8
Straus, S.K.9
-
69
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
Kyte, J.; Doolittle, R. F. A simple method for displaying the hydropathic character of a protein J. Mol. Biol. 1982, 157, 105-132
-
(1982)
J. Mol. Biol.
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.F.2
|