메뉴 건너뛰기




Volumn 4, Issue 2, 2014, Pages 325-339

Horizontal gene transfer can rescue prokaryotes from Muller's ratchet: Benefit of DNA from dead cells and population subdivision

Author keywords

Competence; Environmental DNA; Evolution of transformation; Soil bacteria; Structured population

Indexed keywords

DNA;

EID: 84894561208     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.113.009845     Document Type: Article
Times cited : (104)

References (96)
  • 1
    • 9344261804 scopus 로고    scopus 로고
    • Stress and how bacteria cope with death and survival
    • Aertsen, A., and C. W. Michiels, 2004 Stress and how bacteria cope with death and survival. Crit. Rev. Microbiol. 30: 263-273.
    • (2004) Crit. Rev. Microbiol. , vol.30 , pp. 263-273
    • Aertsen, A.1    Michiels, C.W.2
  • 2
    • 0031736121 scopus 로고    scopus 로고
    • Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles
    • Aravind, L., R. L. Tatusov, Y. I. Wolf, D. R. Walker, and E. V. Koonin, 1998 Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles. Trends Genet. 14: 442-444.
    • (1998) Trends Genet. , vol.14 , pp. 442-444
    • Aravind, L.1    Tatusov, R.L.2    Wolf, Y.I.3    Walker, D.R.4    Koonin, E.V.5
  • 3
    • 84993881895 scopus 로고
    • Recombination and the immortality of the germ line
    • Bell, G., 1988 Recombination and the immortality of the germ line. J. Evol. Biol. 1: 67-82.
    • (1988) J. Evol. Biol. , vol.1 , pp. 67-82
    • Bell, G.1
  • 4
    • 0001652478 scopus 로고
    • Is meiotic recombination an adaptation for repairing DNA, producing genetic variation, or both?
    • edited by R. E. Michod, and B. R. Levin. Sinauer Associates, Sunderland, MA.
    • Bernstein, H., F. A. Hopf, and R. E. Michod, 1988 Is meiotic recombination an adaptation for repairing DNA, producing genetic variation, or both? pp. 139-160 in The Evolution of Sex, edited by R. E. Michod, and B. R. Levin. Sinauer Associates, Sunderland, MA.
    • (1988) The Evolution of Sex , pp. 139-160
    • Bernstein, H.1    Hopf, F.A.2    Michod, R.E.3
  • 5
    • 33645118963 scopus 로고    scopus 로고
    • The role of horizontal gene transfer in the spread of trimethoprim-sulfamethoxazole resistance among uropathogenic Escherichia coli in Europe and Canada
    • Blahna, M. T., C. A. Zalewski, J. Reuer, G. Kahlmeter, B. Foxman et al., 2006 The role of horizontal gene transfer in the spread of trimethoprim-sulfamethoxazole resistance among uropathogenic Escherichia coli in Europe and Canada. J. Antimicrob. Chemother. 57: 666-672.
    • (2006) J. Antimicrob. Chemother. , vol.57 , pp. 666-672
    • Blahna, M.T.1    Zalewski, C.A.2    Reuer, J.3    Kahlmeter, G.4    Foxman, B.5
  • 6
    • 77950627556 scopus 로고    scopus 로고
    • Molecular aspects of gene transfer and foreign DNA acquisition in prokaryotes with regard to safety issues
    • Brigulla, M., and W. Wackernagel, 2010 Molecular aspects of gene transfer and foreign DNA acquisition in prokaryotes with regard to safety issues. Appl. Microbiol. Biotechnol. 86: 1027-1041.
    • (2010) Appl. Microbiol. Biotechnol. , vol.86 , pp. 1027-1041
    • Brigulla, M.1    Wackernagel, W.2
  • 7
    • 34250896106 scopus 로고    scopus 로고
    • Widespread distribution of archaeal reverse gyrase in thermophilic bacteria suggests a complex history of vertical inheritance and lateral gene transfers
    • Brochier-Armanet, C., and P. Forterre, 2007 Widespread distribution of archaeal reverse gyrase in thermophilic bacteria suggests a complex history of vertical inheritance and lateral gene transfers. Archaea 2: 83-93.
    • (2007) Archaea , vol.2 , pp. 83-93
    • Brochier-Armanet, C.1    Forterre, P.2
  • 10
    • 0030668902 scopus 로고    scopus 로고
    • Rapid fixation of deleterious alleles can be caused by Muller's ratchet
    • Charlesworth, B., and D. Charlesworth, 1997 Rapid fixation of deleterious alleles can be caused by Muller's ratchet. Genet. Res. 70: 63-73.
    • (1997) Genet. Res. , vol.70 , pp. 63-73
    • Charlesworth, B.1    Charlesworth, D.2
  • 11
    • 0027313002 scopus 로고
    • Mutation accumulation in finite outbreeding and inbreeding populations
    • Charlesworth, D., M. T. Morgan, and B. Charlesworth, 1993 Mutation accumulation in finite outbreeding and inbreeding populations. Genet. Res. 61: 39-56.
    • (1993) Genet. Res. , vol.61 , pp. 39-56
    • Charlesworth, D.1    Morgan, M.T.2    Charlesworth, B.3
  • 12
    • 33746320813 scopus 로고    scopus 로고
    • Induction of competence regulons as a general response to stress in gram-positive bacteria
    • Claverys, J. P., M. Prudhomme, and B. Martin, 2006 Induction of competence regulons as a general response to stress in gram-positive bacteria. Annu. Rev. Microbiol. 60: 451-475.
    • (2006) Annu. Rev. Microbiol. , vol.60 , pp. 451-475
    • Claverys, J.P.1    Prudhomme, M.2    Martin, B.3
  • 13
    • 64349108725 scopus 로고    scopus 로고
    • The genetic transformation machinery: composition, localization, and mechanism
    • Claverys, J. P., B. Martin, and P. Polard, 2009 The genetic transformation machinery: composition, localization, and mechanism. FEMS Microbiol. Rev. 33: 643-656.
    • (2009) FEMS Microbiol. Rev. , vol.33 , pp. 643-656
    • Claverys, J.P.1    Martin, B.2    Polard, P.3
  • 14
    • 34249711384 scopus 로고    scopus 로고
    • Small-world networks decrease the speed of Muller's ratchet
    • Combadao, J., P. R. Campos, F. Dionisio, and I. Gordo, 2007 Small-world networks decrease the speed of Muller's ratchet. Genet. Res. 89: 7-18.
    • (2007) Genet. Res. , vol.89 , pp. 7-18
    • Combadao, J.1    Campos, P.R.2    Dionisio, F.3    Gordo, I.4
  • 15
    • 34548693859 scopus 로고    scopus 로고
    • Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli
    • Cooper, T. F., 2007 Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli. PLoS Biol. 5: e225.
    • (2007) PLoS Biol. , vol.5
    • Cooper, T.F.1
  • 16
    • 57749188258 scopus 로고    scopus 로고
    • Homologous recombination in Agrobacterium: potential implications for the genomic species concept in bacteria
    • Costechareyre, D., F. Bertolla, and X. Nesme, 2009 Homologous recombination in Agrobacterium: potential implications for the genomic species concept in bacteria. Mol. Biol. Evol. 26: 167-176.
    • (2009) Mol. Biol. Evol. , vol.26 , pp. 167-176
    • Costechareyre, D.1    Bertolla, F.2    Nesme, X.3
  • 17
    • 48249151749 scopus 로고    scopus 로고
    • Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
    • Dagan, T., Y. Artzy-Randrup, and W. Martin, 2008 Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution. Proc. Natl. Acad. Sci. USA 105: 10039-10044.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 10039-10044
    • Dagan, T.1    Artzy-Randrup, Y.2    Martin, W.3
  • 18
    • 77956274591 scopus 로고    scopus 로고
    • Hydrationcontrolled bacterial motility and dispersal on surfaces
    • Dechesne, A., G. Wang, G. Gulez, D. Or, and B. F. Smets, 2010 Hydrationcontrolled bacterial motility and dispersal on surfaces. Proc. Natl. Acad. Sci. USA 107: 14369-14372.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 14369-14372
    • Dechesne, A.1    Wang, G.2    Gulez, G.3    Or, D.4    Smets, B.F.5
  • 19
    • 0032697140 scopus 로고    scopus 로고
    • DNA uptake in bacteria
    • Dubnau, D., 1999 DNA uptake in bacteria. Annu. Rev. Microbiol. 53: 217-244.
    • (1999) Annu. Rev. Microbiol. , vol.53 , pp. 217-244
    • Dubnau, D.1
  • 20
    • 82755160933 scopus 로고    scopus 로고
    • Competence increases survival during stress in Streptococcus pneumoniae
    • Engelmoer, D. J., and D. E. Rozen, 2011 Competence increases survival during stress in Streptococcus pneumoniae. Evolution 65: 3475-3485.
    • (2011) Evolution , vol.65 , pp. 3475-3485
    • Engelmoer, D.J.1    Rozen, D.E.2
  • 21
    • 35048898799 scopus 로고    scopus 로고
    • Genetic exchange across a species boundary in the archaeal genus ferroplasma
    • Eppley, J. M., G. W. Tyson, W. M. Getz, and J. F. Banfield, 2007 Genetic exchange across a species boundary in the archaeal genus ferroplasma. Genetics 177: 407-416.
    • (2007) Genetics , vol.177 , pp. 407-416
    • Eppley, J.M.1    Tyson, G.W.2    Getz, W.M.3    Banfield, J.F.4
  • 22
    • 0035793056 scopus 로고    scopus 로고
    • Recombination within natural populations of pathogenic bacteria: short-term empirical estimates and long-term phylogenetic consequences
    • Feil, E. J., E. C. Holmes, D. E. Bessen, M. S. Chan, N. P. Day et al., 2001 Recombination within natural populations of pathogenic bacteria: short-term empirical estimates and long-term phylogenetic consequences. Proc. Natl. Acad. Sci. USA 98: 182-187.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 182-187
    • Feil, E.J.1    Holmes, E.C.2    Bessen, D.E.3    Chan, M.S.4    Day, N.P.5
  • 23
    • 0034128665 scopus 로고    scopus 로고
    • Estimating recombinational parameters in Streptococcus pneumoniae from multilocus sequence typing data
    • Feil, E. J., J. M. Smith, M. C. Enright, and B. G. Spratt, 2000 Estimating recombinational parameters in Streptococcus pneumoniae from multilocus sequence typing data. Genetics 154: 1439-1450.
    • (2000) Genetics , vol.154 , pp. 1439-1450
    • Feil, E.J.1    Smith, J.M.2    Enright, M.C.3    Spratt, B.G.4
  • 25
    • 0016110957 scopus 로고
    • The evolutionary advantage of recombination
    • Felsenstein, J., 1974 The evolutionary advantage of recombination. Genetics 78: 737-756.
    • (1974) Genetics , vol.78 , pp. 737-756
    • Felsenstein, J.1
  • 26
    • 34250088572 scopus 로고
    • Microenvironments of soil microorganisms
    • Foster, R. C., 1988 Microenvironments of soil microorganisms. Biol. Fertil. Soils 6: 189-203.
    • (1988) Biol. Fertil. Soils , vol.6 , pp. 189-203
    • Foster, R.C.1
  • 28
    • 67651113811 scopus 로고    scopus 로고
    • Stress-induced prophage DNA replication in Salmonella enterica serovar Typhimurium
    • Garcia-Russell, N., B. Elrod, and K. Dominguez, 2009 Stress-induced prophage DNA replication in Salmonella enterica serovar Typhimurium. Infect. Genet. Evol. 9: 889-895.
    • (2009) Infect. Genet. Evol. , vol.9 , pp. 889-895
    • Garcia-Russell, N.1    Elrod, B.2    Dominguez, K.3
  • 30
    • 84865074474 scopus 로고    scopus 로고
    • Dynamic mutation-selection balance as an evolutionary attractor
    • Goyal, S., D. J. Balick, E. R. Jerison, R. A. Neher, B. I. Shraiman et al., 2012 Dynamic mutation-selection balance as an evolutionary attractor. Genetics 191: 1309-1319.
    • (2012) Genetics , vol.191 , pp. 1309-1319
    • Goyal, S.1    Balick, D.J.2    Jerison, E.R.3    Neher, R.A.4    Shraiman, B.I.5
  • 31
    • 2142704282 scopus 로고    scopus 로고
    • Spatial scales of soil bacterial diversity-the size of a clone
    • Grundmann, G. L., 2004 Spatial scales of soil bacterial diversity-the size of a clone. FEMS Microbiol. Ecol. 48: 119-127.
    • (2004) FEMS Microbiol. Ecol. , vol.48 , pp. 119-127
    • Grundmann, G.L.1
  • 32
    • 0033779659 scopus 로고    scopus 로고
    • Microscale diversity of the genus Nitrobacter in soil on the basis of analysis of genes encoding rRNA
    • Grundmann, G. L., and P. Normand, 2000 Microscale diversity of the genus Nitrobacter in soil on the basis of analysis of genes encoding rRNA. Appl. Environ. Microbiol. 66: 4543-4546.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4543-4546
    • Grundmann, G.L.1    Normand, P.2
  • 33
    • 0018029597 scopus 로고
    • The accumulation of deleterious genes in a population-Muller's ratchet
    • Haigh, J., 1978 The accumulation of deleterious genes in a population-Muller's ratchet. Theor. Popul. Biol. 14: 251-267.
    • (1978) Theor. Popul. Biol. , vol.14 , pp. 251-267
    • Haigh, J.1
  • 34
    • 0035956876 scopus 로고    scopus 로고
    • Metapopulation extinction caused by mutation accumulation
    • Higgins, K., and M. Lynch, 2001 Metapopulation extinction caused by mutation accumulation. Proc. Natl. Acad. Sci. USA 98: 2928-2933.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 2928-2933
    • Higgins, K.1    Lynch, M.2
  • 35
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • Hill, W. G., and A. Robertson, 1966 The effect of linkage on limits to artificial selection. Genet. Res. 8: 269-294.
    • (1966) Genet. Res. , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 36
    • 38849130017 scopus 로고    scopus 로고
    • Double illegitimate recombination events integrate DNA segments through two different mechanisms during natural transformation of Acinetobacter baylyi
    • Hulter, N., and W. Wackernagel, 2008 Double illegitimate recombination events integrate DNA segments through two different mechanisms during natural transformation of Acinetobacter baylyi. Mol. Microbiol. 67: 984-995.
    • (2008) Mol. Microbiol. , vol.67 , pp. 984-995
    • Hulter, N.1    Wackernagel, W.2
  • 37
    • 36849090593 scopus 로고    scopus 로고
    • Natural genetic transformation: prevalence, mechanisms and function
    • Johnsborg, O., V. Eldholm, and L. S. Havarstein, 2007 Natural genetic transformation: prevalence, mechanisms and function. Res. Microbiol. 158: 767-778.
    • (2007) Res. Microbiol. , vol.158 , pp. 767-778
    • Johnsborg, O.1    Eldholm, V.2    Havarstein, L.S.3
  • 38
    • 84874765546 scopus 로고    scopus 로고
    • Programmed protection of foreign DNA from restriction allows pathogenicity island exchange during pneumococcal transformation
    • Johnston, C., B. Martin, C. Granadel, P. Polard, and J. P. Claverys, 2013 Programmed protection of foreign DNA from restriction allows pathogenicity island exchange during pneumococcal transformation. PLoS Pathog. 9: e1003178.
    • (2013) PLoS Pathog. , vol.9
    • Johnston, C.1    Martin, B.2    Granadel, C.3    Polard, P.4    Claverys, J.P.5
  • 39
    • 33748428600 scopus 로고    scopus 로고
    • Interference among deleterious mutations favours sex and recombination in finite populations
    • Keightley, P. D., and S. P. Otto, 2006 Interference among deleterious mutations favours sex and recombination in finite populations. Nature 443: 89-92.
    • (2006) Nature , vol.443 , pp. 89-92
    • Keightley, P.D.1    Otto, S.P.2
  • 40
    • 63149098907 scopus 로고    scopus 로고
    • Horizontal gene transfer of virulence determinants in selected bacterial foodborne pathogens
    • Kelly, B. G., A. Vespermann, and D. J. Bolton, 2009 Horizontal gene transfer of virulence determinants in selected bacterial foodborne pathogens. Food Chem. Toxicol. 47: 969-977.
    • (2009) Food Chem. Toxicol. , vol.47 , pp. 969-977
    • Kelly, B.G.1    Vespermann, A.2    Bolton, D.J.3
  • 41
    • 84894578625 scopus 로고
    • ('Hamidashi Seibutsugaku') (in Japanese). Heibonsha, Tokyo.
    • Komatsu, S., 1980 Overstepping Biology ("Hamidashi Seibutsugaku") (in Japanese). Heibonsha, Tokyo.
    • (1980) Overstepping Biology
    • Komatsu, S.1
  • 42
    • 0023737547 scopus 로고
    • Deleterious mutations and the evolution of sexual reproduction
    • Kondrashov, A. S., 1988 Deleterious mutations and the evolution of sexual reproduction. Nature 336: 435-440.
    • (1988) Nature , vol.336 , pp. 435-440
    • Kondrashov, A.S.1
  • 43
    • 0027486081 scopus 로고
    • Classification of hypotheses on the advantage of amphimixis
    • Kondrashov, A. S., 1993 Classification of hypotheses on the advantage of amphimixis. J. Hered. 84: 372-387.
    • (1993) J. Hered. , vol.84 , pp. 372-387
    • Kondrashov, A.S.1
  • 44
    • 80051801494 scopus 로고    scopus 로고
    • FT Press Science, Upper Saddle River, NJ.
    • Koonin, E. V., 2011 The Logic of Chance. FT Press Science, Upper Saddle River, NJ.
    • (2011) The Logic of Chance
    • Koonin, E.V.1
  • 45
    • 0034780910 scopus 로고    scopus 로고
    • Horizontal gene transfer in prokaryotes: quantification and classification
    • Koonin, E. V., K. S. Makarova, and L. Aravind, 2001 Horizontal gene transfer in prokaryotes: quantification and classification. Annu. Rev. Microbiol. 55: 709-742.
    • (2001) Annu. Rev. Microbiol. , vol.55 , pp. 709-742
    • Koonin, E.V.1    Makarova, K.S.2    Aravind, L.3
  • 46
    • 33846659065 scopus 로고    scopus 로고
    • Importance of widespread gene transfer agent genes in alpha-proteobacteria
    • Lang, A. S., and J. T. Beatty, 2007 Importance of widespread gene transfer agent genes in alpha-proteobacteria. Trends Microbiol. 15: 54-62.
    • (2007) Trends Microbiol. , vol.15 , pp. 54-62
    • Lang, A.S.1    Beatty, J.T.2
  • 47
    • 84862491510 scopus 로고    scopus 로고
    • Gene transfer agents: phage-like elements of genetic exchange
    • Lang, A. S., O. Zhaxybayeva, and J. T. Beatty, 2012 Gene transfer agents: phage-like elements of genetic exchange. Nat. Rev. Microbiol. 10: 472-482.
    • (2012) Nat. Rev. Microbiol. , vol.10 , pp. 472-482
    • Lang, A.S.1    Zhaxybayeva, O.2    Beatty, J.T.3
  • 48
    • 21844434913 scopus 로고    scopus 로고
    • Evolutionary origins of genomic repertoires in bacteria
    • Lerat, E., V. Daubin, H. Ochman, and N. A. Moran, 2005 Evolutionary origins of genomic repertoires in bacteria. PLoS Biol. 3: e130.
    • (2005) PLoS Biol. , vol.3
    • Lerat, E.1    Daubin, V.2    Ochman, H.3    Moran, N.A.4
  • 49
    • 0013569028 scopus 로고
    • The evolution of sex in bacteria
    • edited by R. E. Michod, and B. R. Levin. Sinauer Associates, Sunderland, MA.
    • Levin, B. R., 1988 The evolution of sex in bacteria, pp. 194-211 in The Evolution of Sex, edited by R. E. Michod, and B. R. Levin. Sinauer Associates, Sunderland, MA.
    • (1988) The Evolution of Sex , pp. 194-211
    • Levin, B.R.1
  • 50
    • 70149105095 scopus 로고    scopus 로고
    • The population and evolutionary dynamics of homologous gene recombination in bacterial populations
    • Levin, B. R., and O. E. Cornejo, 2009 The population and evolutionary dynamics of homologous gene recombination in bacterial populations. PLoS Genet. 5: e1000601.
    • (2009) PLoS Genet. , vol.5
    • Levin, B.R.1    Cornejo, O.E.2
  • 51
    • 0034089028 scopus 로고    scopus 로고
    • Compensatory mutations, antibiotic resistance and the population genetics of adaptive evolution in bacteria
    • Levin, B. R., V. Perrot, and N. Walker, 2000 Compensatory mutations, antibiotic resistance and the population genetics of adaptive evolution in bacteria. Genetics 154: 985-997.
    • (2000) Genetics , vol.154 , pp. 985-997
    • Levin, B.R.1    Perrot, V.2    Walker, N.3
  • 52
    • 0028136885 scopus 로고
    • Bacterial gene transfer by natural genetic transformation in the environment
    • Lorenz, M. G., and W. Wackernagel, 1994 Bacterial gene transfer by natural genetic transformation in the environment. Microbiol. Rev. 58: 563-602.
    • (1994) Microbiol. Rev. , vol.58 , pp. 563-602
    • Lorenz, M.G.1    Wackernagel, W.2
  • 53
    • 0027428093 scopus 로고
    • The mutational meltdown in asexual populations
    • Lynch, M., R. Burger, D. Butcher, and W. Gabriel, 1993 The mutational meltdown in asexual populations. J. Hered. 84: 339-344.
    • (1993) J. Hered. , vol.84 , pp. 339-344
    • Lynch, M.1    Burger, R.2    Butcher, D.3    Gabriel, W.4
  • 54
    • 0032709783 scopus 로고    scopus 로고
    • DNA sequence similarity requirements for interspecific recombination in Bacillus
    • Majewski, J., and F. M. Cohan, 1999 DNA sequence similarity requirements for interspecific recombination in Bacillus. Genetics 153: 1525-1533.
    • (1999) Genetics , vol.153 , pp. 1525-1533
    • Majewski, J.1    Cohan, F.M.2
  • 55
    • 67649872627 scopus 로고    scopus 로고
    • Toolbox model of evolution of prokaryotic metabolic networks and their regulation
    • Maslov, S., S. Krishna, T. Y. Pang, and K. Sneppen, 2009 Toolbox model of evolution of prokaryotic metabolic networks and their regulation. Proc. Natl. Acad. Sci. USA 106: 9743-9748.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 9743-9748
    • Maslov, S.1    Krishna, S.2    Pang, T.Y.3    Sneppen, K.4
  • 58
    • 83855165692 scopus 로고    scopus 로고
    • Extreme genome reduction in symbiotic bacteria
    • McCutcheon, J. P., and N. A. Moran, 2012 Extreme genome reduction in symbiotic bacteria. Nat. Rev. Microbiol. 10: 13-26.
    • (2012) Nat. Rev. Microbiol. , vol.10 , pp. 13-26
    • McCutcheon, J.P.1    Moran, N.A.2
  • 60
    • 79954532607 scopus 로고    scopus 로고
    • Rickettsial evolution in the light of comparative genomics
    • Merhej, V., and D. Raoult, 2011 Rickettsial evolution in the light of comparative genomics. Biol. Rev. Camb. Philos. Soc. 86: 379-405.
    • (2011) Biol. Rev. Camb. Philos. Soc. , vol.86 , pp. 379-405
    • Merhej, V.1    Raoult, D.2
  • 62
    • 0029866448 scopus 로고    scopus 로고
    • Accelerated evolution and Muller's ratchet in endosymbiotic bacteria
    • Moran, N. A., 1996 Accelerated evolution and Muller's ratchet in endosymbiotic bacteria. Proc. Natl. Acad. Sci. USA 93: 2873-2878.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 2873-2878
    • Moran, N.A.1
  • 64
    • 50549201557 scopus 로고
    • The relation of recombination to mutational advance
    • Muller, H. J., 1964 The relation of recombination to mutational advance. Mutat. Res. 106: 2-9.
    • (1964) Mutat. Res. , vol.106 , pp. 2-9
    • Muller, H.J.1
  • 65
    • 84865097372 scopus 로고    scopus 로고
    • Fluctuations of fitness distributions and the rate of Muller's ratchet
    • Neher, R. A., and B. I. Shraiman, 2012 Fluctuations of fitness distributions and the rate of Muller's ratchet. Genetics 191: 1283-1293.
    • (2012) Genetics , vol.191 , pp. 1283-1293
    • Neher, R.A.1    Shraiman, B.I.2
  • 68
    • 58149492429 scopus 로고    scopus 로고
    • Trends in prokaryotic evolution revealed by comparison of closely related bacterial and archaeal genomes
    • Novichkov, P. S., Y. I. Wolf, I. Dubchak, and E. V. Koonin, 2009 Trends in prokaryotic evolution revealed by comparison of closely related bacterial and archaeal genomes. J. Bacteriol. 191: 65-73.
    • (2009) J. Bacteriol. , vol.191 , pp. 65-73
    • Novichkov, P.S.1    Wolf, Y.I.2    Dubchak, I.3    Koonin, E.V.4
  • 69
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman, H., J. G. Lawrence, and E. A. Groisman, 2000 Lateral gene transfer and the nature of bacterial innovation. Nature 405: 299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 70
    • 0036209507 scopus 로고    scopus 로고
    • Resolving the paradox of sex and recombination
    • Otto, S. P., and T. Lenormand, 2002 Resolving the paradox of sex and recombination. Nat. Rev. Genet. 3: 252-261.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 252-261
    • Otto, S.P.1    Lenormand, T.2
  • 71
    • 28444475529 scopus 로고    scopus 로고
    • Adaptive evolution of bacterial metabolic networks by horizontal gene transfer
    • Pál, C., B. Papp, and M. J. Lercher, 2005 Adaptive evolution of bacterial metabolic networks by horizontal gene transfer. Nat. Genet. 37: 1372-1375.
    • (2005) Nat. Genet. , vol.37 , pp. 1372-1375
    • Pál, C.1    Papp, B.2    Lercher, M.J.3
  • 72
    • 0023319787 scopus 로고
    • Accumulation of mutations in sexual and asexual populations
    • Pamilo, P., M. Nei, and W.-H. Li, 1987 Accumulation of mutations in sexual and asexual populations. Genet. Res. 49: 135-146.
    • (1987) Genet. Res. , vol.49 , pp. 135-146
    • Pamilo, P.1    Nei, M.2    Li, W.-H.3
  • 75
    • 33745920513 scopus 로고    scopus 로고
    • Antibiotic stress induces genetic transformability in the human pathogen Streptococcus pneumoniae
    • Prudhomme, M., L. Attaiech, G. Sanchez, B. Martin, and J. P. Claverys, 2006 Antibiotic stress induces genetic transformability in the human pathogen Streptococcus pneumoniae. Science 313: 89-92.
    • (2006) Science , vol.313 , pp. 89-92
    • Prudhomme, M.1    Attaiech, L.2    Sanchez, G.3    Martin, B.4    Claverys, J.P.5
  • 76
    • 0024005392 scopus 로고
    • Evolution of bacterial transformation: is sex with dead cells ever better than no sex at all?
    • Redfield, R. J., 1988 Evolution of bacterial transformation: is sex with dead cells ever better than no sex at all? Genetics 119: 213-221.
    • (1988) Genetics , vol.119 , pp. 213-221
    • Redfield, R.J.1
  • 77
    • 0035430787 scopus 로고    scopus 로고
    • Do bacteria have sex?
    • Redfield, R. J., 2001 Do bacteria have sex? Nat. Rev. Genet. 2: 634-639.
    • (2001) Nat. Rev. Genet. , vol.2 , pp. 634-639
    • Redfield, R.J.1
  • 78
    • 0030984550 scopus 로고    scopus 로고
    • The evolution of bacterial transformation: sex with poor relations
    • Redfield, R. J., M. R. Schrag, and A. M. Dean, 1997 The evolution of bacterial transformation: sex with poor relations. Genetics 146: 27-38.
    • (1997) Genetics , vol.146 , pp. 27-38
    • Redfield, R.J.1    Schrag, M.R.2    Dean, A.M.3
  • 79
    • 0035158508 scopus 로고    scopus 로고
    • Clonal population structure of Pseudomonas stutzeri, a species with exceptional genetic diversity
    • Rius, N., M. C. Fuste, C. Guasp, J. Lalucat, and J. G. Loren, 2001 Clonal population structure of Pseudomonas stutzeri, a species with exceptional genetic diversity. J. Bacteriol. 183: 736-744.
    • (2001) J. Bacteriol. , vol.183 , pp. 736-744
    • Rius, N.1    Fuste, M.C.2    Guasp, C.3    Lalucat, J.4    Loren, J.G.5
  • 80
    • 37848998555 scopus 로고    scopus 로고
    • The traveling-wave approach to asexual evolution: Muller's ratchet and speed of adaptation
    • Rouzine, I. M., E. Brunet, and C. O. Wilke, 2008 The traveling-wave approach to asexual evolution: Muller's ratchet and speed of adaptation. Theor. Popul. Biol. 73: 24-46.
    • (2008) Theor. Popul. Biol. , vol.73 , pp. 24-46
    • Rouzine, I.M.1    Brunet, E.2    Wilke, C.O.3
  • 81
    • 84859499489 scopus 로고    scopus 로고
    • Population genomics of early events in the ecological differentiation of bacteria
    • Shapiro, B. J., J. Friedman, O. X. Cordero, S. P. Preheim, S. C. Timberlake et al., 2012 Population genomics of early events in the ecological differentiation of bacteria. Science 336: 48-51.
    • (2012) Science , vol.336 , pp. 48-51
    • Shapiro, B.J.1    Friedman, J.2    Cordero, O.X.3    Preheim, S.P.4    Timberlake, S.C.5
  • 82
    • 0031888392 scopus 로고    scopus 로고
    • Natural genetic transformation of Pseudomonas stutzeri in a non-sterile soil
    • Sikorski, J., S. Graupner, M. G. Lorenz, and W. Wackernagel, 1998 Natural genetic transformation of Pseudomonas stutzeri in a non-sterile soil. Microbiology 144: 569-576.
    • (1998) Microbiology , vol.144 , pp. 569-576
    • Sikorski, J.1    Graupner, S.2    Lorenz, M.G.3    Wackernagel, W.4
  • 83
    • 0002188614 scopus 로고
    • Gene transfer among bacteria in soil
    • edited by S. B. Levy, and R. V. Miller. McGraw-Hill, New York.
    • Stotzky, G., 1989 Gene transfer among bacteria in soil, pp. 165-222 in Gene Transfer in the Environment. edited by S. B. Levy, and R. V. Miller. McGraw-Hill, New York.
    • (1989) Gene Transfer in the Environment , pp. 165-222
    • Stotzky, G.1
  • 84
    • 23944475626 scopus 로고    scopus 로고
    • Mechanisms of, and barriers to, horizontal gene transfer between bacteria
    • Thomas, C. M., and K. M. Nielsen, 2005 Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat. Rev. Microbiol. 3: 711-721.
    • (2005) Nat. Rev. Microbiol. , vol.3 , pp. 711-721
    • Thomas, C.M.1    Nielsen, K.M.2
  • 85
    • 79851505378 scopus 로고    scopus 로고
    • Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes
    • Treangen, T. J., and E. P. Rocha, 2011 Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes. PLoS Genet. 7: e1001284.
    • (2011) PLoS Genet. , vol.7
    • Treangen, T.J.1    Rocha, E.P.2
  • 86
    • 0242586014 scopus 로고    scopus 로고
    • Relationship between spatial and genetic distance in Agrobacterium spp. in 1 cubic centimeter of soil
    • Vogel, J., P. Normand, J. Thioulouse, X. Nesme, and G. L. Grundmann, 2003 Relationship between spatial and genetic distance in Agrobacterium spp. in 1 cubic centimeter of soil. Appl. Environ. Microbiol. 69: 1482-1487.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1482-1487
    • Vogel, J.1    Normand, P.2    Thioulouse, J.3    Nesme, X.4    Grundmann, G.L.5
  • 87
    • 66249147580 scopus 로고    scopus 로고
    • Why do bacteria engage in homologous recombination?
    • Vos, M., 2009 Why do bacteria engage in homologous recombination? Trends Microbiol. 17: 226-232.
    • (2009) Trends Microbiol. , vol.17 , pp. 226-232
    • Vos, M.1
  • 88
    • 58549084151 scopus 로고    scopus 로고
    • A comparison of homologous recombination rates in bacteria and archaea
    • Vos, M., and X. Didelot, 2009 A comparison of homologous recombination rates in bacteria and archaea. ISME J. 3: 199-208.
    • (2009) ISME J. , vol.3 , pp. 199-208
    • Vos, M.1    Didelot, X.2
  • 90
    • 14644403101 scopus 로고    scopus 로고
    • Microbial horizontal gene transfer and the DNA release from transgenic crop plants
    • Vries, J., and W. Wackernagel, 2005 Microbial horizontal gene transfer and the DNA release from transgenic crop plants. Plant Soil 266: 91-104.
    • (2005) Plant Soil , vol.266 , pp. 91-104
    • Vries, J.1    Wackernagel, W.2
  • 92
    • 14744282987 scopus 로고    scopus 로고
    • Diversity in times of adversity: probabilistic strategies in microbial survival games
    • Wolf, D. M., V. V. Vazirani, and A. P. Arkin, 2005 Diversity in times of adversity: probabilistic strategies in microbial survival games. J. Theor. Biol. 234: 227-253.
    • (2005) J. Theor. Biol. , vol.234 , pp. 227-253
    • Wolf, D.M.1    Vazirani, V.V.2    Arkin, A.P.3
  • 93
    • 78049419053 scopus 로고    scopus 로고
    • Optimal strategy for competence differentiation in bacteria
    • Wylie, C. S., A. D. Trout, D. A. Kessler, and H. Levine, 2010 Optimal strategy for competence differentiation in bacteria. PLoS Genet. 6: e1001108.
    • (2010) PLoS Genet. , vol.6
    • Wylie, C.S.1    Trout, A.D.2    Kessler, D.A.3    Levine, H.4
  • 94
    • 84865417779 scopus 로고    scopus 로고
    • Genome-wide survey of mutual homologous recombination in a highly sexual bacterial species
    • Yahara, K., M. Kawai, Y. Furuta, N. Takahashi, N. Handa et al., 2012 Genome-wide survey of mutual homologous recombination in a highly sexual bacterial species. Genome Biol. Evol. 4: 628-640.
    • (2012) Genome Biol. Evol. , vol.4 , pp. 628-640
    • Yahara, K.1    Kawai, M.2    Furuta, Y.3    Takahashi, N.4    Handa, N.5
  • 95
    • 58949092783 scopus 로고    scopus 로고
    • Microbial distribution in soils: physics and scaling
    • edited by L. S. Donald. Academic Press, San Diego.
    • Young, I. M., J. W. Crawford, N. Nunan, W. Otten, and A. Spiers, 2008 Microbial distribution in soils: physics and scaling, pp. 81-121 in Advances in Agronomy. edited by L. S. Donald. Academic Press, San Diego.
    • (2008) Advances in Agronomy , pp. 81-121
    • Young, I.M.1    Crawford, J.W.2    Nunan, N.3    Otten, W.4    Spiers, A.5
  • 96
    • 84868319858 scopus 로고    scopus 로고
    • Extracellular DNA release by undomesticated Bacillus subtilis is regulated by early competence
    • Zafra, O., M. Lamprecht-Grandio, C. G. de Figueras, and J. E. Gonzalez-Pastor, 2012 Extracellular DNA release by undomesticated Bacillus subtilis is regulated by early competence. PLoS ONE 7: e48716.
    • (2012) PLoS ONE , vol.7
    • Zafra, O.1    Lamprecht-Grandio, M.2    de Figueras, C.G.3    Gonzalez-Pastor, J.E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.